F401654

General Info

Members Datasets Scaffolds Average Seq Length
312 160 312 282

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100015832|Ga0075430_1000158324
Length 312
Sequence MSRHCSATRYSGEPTNDQRLPTNLRDTNFYYSFLVLPAAKRQAIIAVWDFCRAVDDATDELGAKDPSSAPGEVERWRKELSACFGAGSPQTGQGQALVPVIARFGLSRQPFDALIEGVEMDLGSRRYETFDDLYQYCIRVASAVGLICLDIFGSRDPGSRQYATDLGVALQLTNILRDVRGDLERGRIYIPLEDLRAHGCTEEDLRRESTTAGTGVRSPAVKALLRQQAMRARDYYVRAARALPPRDAGRLIAAEIMGAIYREILDRIERREYDVFSEVVRIPRSRRAVIAAATWARMILRPGAAAGRVLSG

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
96 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
97 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
98 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.49
Nodule 0
Rhizoplane 5.13
Rhizosphere 90.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10012444 3300002459 Bacteria 1755
2 Ga0065712_10110338 3300005290 Bacteria 1838
3 Ga0065712_10236197 3300005290 Bacteria 997
4 Ga0065707_10142133 3300005295 Bacteria 1759
5 Ga0070683_100000702 3300005329 Bacteria 24327
6 Ga0070683_100061640 3300005329 Bacteria 3488
7 Ga0070683_100084451 3300005329 Bacteria 2975
8 Ga0070670_100003306 3300005331 Bacteria 13341
9 Ga0070670_100012161 3300005331 Bacteria 7363
10 Ga0070670_100021875 3300005331 Bacteria 5501
11 Ga0070670_100073175 3300005331 Bacteria 2944
12 Ga0070670_100195356 3300005331 Bacteria 1758
13 Ga0068869_100667030 3300005334 Bacteria 884
14 Ga0070680_100133926 3300005336 Bacteria 2074
15 Ga0070661_100027936 3300005344 Unclassified 4066
16 Ga0070692_10003087 3300005345 Bacteria 6661
17 Ga0070668_100158322 3300005347 Bacteria 1836
18 Ga0070669_100042632 3300005353 Bacteria 3302
19 Ga0070669_100151098 3300005353 Bacteria 1798
20 Ga0070675_100276028 3300005354 Bacteria 1476
21 Ga0070675_100375730 3300005354 Bacteria 1264
22 Ga0070671_100060368 3300005355 Bacteria 3157
23 Ga0070659_100082386 3300005366 Bacteria 2570
24 Ga0070667_100042579 3300005367 Unclassified 3810
25 Ga0070705_100028397 3300005440 Bacteria 3064
26 Ga0070705_100029859 3300005440 Bacteria 3004
27 Ga0070700_100274855 3300005441 Bacteria 1219
28 Ga0070694_100001092 3300005444 Bacteria 15541
29 Ga0070694_100039054 3300005444 Bacteria 3158
30 Ga0070694_100086271 3300005444 Unclassified 2193
31 Ga0070694_100332682 3300005444 Bacteria 1172
32 Ga0070663_100021698 3300005455 Unclassified 4276
33 Ga0070663_100181034 3300005455 Bacteria 1635
34 Ga0070662_100084115 3300005457 Bacteria 2376
35 Ga0070681_10191699 3300005458 Unclassified 1964
36 Ga0070698_100065993 3300005471 Bacteria 3644
37 Ga0070679_100075986 3300005530 Bacteria 3349
38 Ga0070684_100000068 3300005535 Bacteria 65538
39 Ga0070684_100009549 3300005535 Bacteria 7645
40 Ga0070697_100017228 3300005536 Bacteria 5681
41 Ga0070672_100064563 3300005543 Bacteria 2893
42 Ga0070672_100131552 3300005543 Bacteria 2057
43 Ga0070686_100421883 3300005544 Bacteria 1019
44 Ga0070693_100087093 3300005547 Bacteria 1875
45 Ga0070704_100001929 3300005549 Bacteria 11462
46 Ga0068855_100591855 3300005563 Bacteria 1197
47 Ga0070664_100008127 3300005564 Bacteria 8482
48 Ga0070664_100405208 3300005564 Bacteria 1247
49 Ga0070664_100433311 3300005564 Bacteria 1205
50 Ga0068857_100025150 3300005577 Bacteria 5242
51 Ga0068857_100527208 3300005577 Bacteria 1111
52 Ga0068864_100033212 3300005618 Bacteria 4387
53 Ga0068864_100163595 3300005618 Bacteria 2024
54 Ga0068864_100355487 3300005618 Bacteria 1383
55 Ga0068864_100545741 3300005618 Bacteria 1120
56 Ga0068866_10098847 3300005718 Bacteria 1606
57 Ga0068870_10031978 3300005840 Unclassified 2670
58 Ga0068862_100087836 3300005844 Unclassified 2704
59 Ga0075365_10007190 3300006038 Bacteria 6215
60 Ga0075363_100042470 3300006048 Bacteria 2403
61 Ga0075364_10045719 3300006051 Bacteria 2849
62 Ga0075364_10062555 3300006051 Bacteria 2442
63 Ga0075362_10000421 3300006177 Bacteria 12191
64 Ga0075367_10003356 3300006178 Bacteria 7615
65 Ga0075367_10030191 3300006178 Bacteria 3106
66 Ga0075367_10140121 3300006178 Bacteria 1498
67 Ga0075366_10013364 3300006195 Bacteria 4672
68 Ga0068871_100194817 3300006358 Bacteria 1747
69 Ga0075428_100000080 3300006844 Bacteria 80349
70 Ga0075428_100007708 3300006844 Bacteria 11927
71 Ga0075428_100020594 3300006844 Bacteria 7304
72 Ga0075428_100030531 3300006844 Bacteria 5959
73 Ga0075428_100080083 3300006844 Bacteria 3564
74 Ga0075428_100331786 3300006844 Unclassified 1634
75 Ga0075428_100370185 3300006844 Unclassified 1536
76 Ga0075430_100002473 3300006846 Bacteria 15388
77 Ga0075430_100005957 3300006846 Bacteria 10294
78 Ga0075430_100015832 3300006846 Bacteria 6423
79 Ga0075430_100101527 3300006846 Bacteria 2402
80 Ga0075431_100002515 3300006847 Bacteria 17677
81 Ga0075431_100010197 3300006847 Bacteria 9447
82 Ga0075431_100013973 3300006847 Bacteria 8109
83 Ga0075431_100022383 3300006847 Bacteria 6459
84 Ga0075431_100032456 3300006847 Bacteria 5381
85 Ga0075431_100048147 3300006847 Unclassified 4397
86 Ga0075431_100117956 3300006847 Bacteria 2738
87 Ga0075431_100119197 3300006847 Bacteria 2723
88 Ga0075431_100126183 3300006847 Bacteria 2640
89 Ga0075433_10030070 3300006852 Bacteria 4632
90 Ga0075433_10053986 3300006852 Bacteria 3505
91 Ga0075434_100010893 3300006871 Bacteria 8550
92 Ga0075434_100092840 3300006871 Bacteria 3021
93 Ga0075434_100448373 3300006871 Bacteria 1312
94 Ga0075429_100000156 3300006880 Bacteria 42804
95 Ga0075429_100012854 3300006880 Bacteria 7262
96 Ga0075429_100084187 3300006880 Bacteria 2772
97 Ga0075429_100098878 3300006880 Bacteria 2546
98 Ga0105240_10172977 3300009093 Bacteria 2556
99 Ga0111539_10000181 3300009094 Bacteria 73457
100 Ga0111539_10009783 3300009094 Bacteria 12103
101 Ga0111539_10078671 3300009094 Bacteria 3878
102 Ga0111539_10141282 3300009094 Bacteria 2818
103 Ga0111539_10362017 3300009094 Unclassified 1688
104 Ga0114129_10000077 3300009147 Bacteria 90951
105 Ga0114129_10000171 3300009147 Bacteria 70782
106 Ga0114129_10003059 3300009147 Bacteria 23455
107 Ga0114129_10003912 3300009147 Bacteria 21020
108 Ga0114129_10016371 3300009147 Bacteria 10555
109 Ga0114129_10053022 3300009147 Bacteria 5690
110 Ga0114129_10081213 3300009147 Bacteria 4506
111 Ga0114129_10136051 3300009147 Bacteria 3371
112 Ga0114129_10236925 3300009147 Bacteria 2455
113 Ga0105248_10014318 3300009177 Bacteria 8730
114 Ga0105249_10001092 3300009553 Bacteria 24120
115 Ga0105246_10183462 3300011119 Unclassified 1613
116 Ga0157378_10222961 3300013297 Bacteria 1793
117 Ga0157375_10125163 3300013308 Unclassified 2684
118 Ga0163163_10026312 3300014325 Bacteria 5560
119 Ga0163163_10709360 3300014325 Bacteria 1069
120 Ga0157380_10034162 3300014326 Bacteria 3921
121 Ga0157380_10123685 3300014326 Bacteria 2195
122 Ga0157380_10303715 3300014326 Bacteria 1471
123 Ga0157380_10560413 3300014326 Bacteria 1123
124 Ga0207697_10004317 3300025315 Bacteria 6811
125 Ga0207707_10146904 3300025912 Bacteria 2061
126 Ga0207660_10108471 3300025917 Bacteria 2085
127 Ga0207649_10019128 3300025920 Unclassified 3911
128 Ga0207646_10445994 3300025922 Bacteria 1168
129 Ga0207681_10070998 3300025923 Unclassified 2427
130 Ga0207650_10008008 3300025925 Bacteria 7201
131 Ga0207650_10019605 3300025925 Unclassified 4755
132 Ga0207650_10038451 3300025925 Bacteria 3495
133 Ga0207650_10051504 3300025925 Bacteria 3047
134 Ga0207650_10301158 3300025925 Bacteria 1309
135 Ga0207659_10317746 3300025926 Bacteria 1284
136 Ga0207644_10147282 3300025931 Bacteria 1819
137 Ga0207690_10060421 3300025932 Bacteria 2572
138 Ga0207690_10110006 3300025932 Bacteria 1983
139 Ga0207706_10070704 3300025933 Bacteria 3070
140 Ga0207669_10115278 3300025937 Bacteria 1811
141 Ga0207691_10092611 3300025940 Bacteria 2707
142 Ga0207691_10210408 3300025940 Bacteria 1689
143 Ga0207711_10037782 3300025941 Unclassified 4104
144 Ga0207689_10654560 3300025942 Bacteria 885
145 Ga0207661_10002311 3300025944 Bacteria 13129
146 Ga0207679_10002489 3300025945 Bacteria 11346
147 Ga0207679_10395865 3300025945 Bacteria 1214
148 Ga0207667_10526000 3300025949 Bacteria 1198
149 Ga0207668_10236749 3300025972 Bacteria 1475
150 Ga0207668_10391644 3300025972 Bacteria 1172
151 Ga0207658_10162368 3300025986 Bacteria 1832
152 Ga0207703_10040994 3300026035 Bacteria 3708
153 Ga0207678_10073992 3300026067 Bacteria 2919
154 Ga0207678_10083611 3300026067 Unclassified 2730
155 Ga0207708_10330541 3300026075 Unclassified 1246
156 Ga0207648_10456778 3300026089 Bacteria 1164
157 Ga0207676_10137842 3300026095 Bacteria 2085
158 Ga0207676_10173903 3300026095 Unclassified 1879
159 Ga0207676_10185062 3300026095 Bacteria 1827
160 Ga0207674_10060883 3300026116 Bacteria 3816
161 Ga0207683_10082568 3300026121 Bacteria 2855
162 Ga0207683_10143178 3300026121 Bacteria 2154
163 Ga0207683_10206460 3300026121 Bacteria 1787
164 Ga0207698_10109335 3300026142 Bacteria 2313
165 Ga0207428_10000558 3300027907 Bacteria 44040
166 Ga0207428_10036204 3300027907 Bacteria 4028
167 Ga0207428_10068932 3300027907 Bacteria 2781
168 Ga0307408_100015321 3300031548 Bacteria 5104
169 Ga0307408_100049470 3300031548 Unclassified 3019
170 Ga0307413_10208830 3300031824 Unclassified 1416
171 Ga0307413_10217717 3300031824 Bacteria 1392
172 Ga0307407_10337033 3300031903 Bacteria 1063
173 Ga0307409_100205674 3300031995 Bacteria 1765
174 Ga0307409_100453946 3300031995 Bacteria 1238
175 Ga0307416_100362451 3300032002 Unclassified 1472
176 Ga0373937_0016058 3300036401 Bacteria 6641
177 Ga0439441_012761 3300042001 Unclassified 1448
178 Ga0439450_000791 3300042008 Bacteria 4332
179 Ga0439435_0003132 3300042436 Bacteria 3397
180 Ga0439435_0025643 3300042436 Bacteria 1565
181 Ga0439464_0006893 3300042439 Unclassified 2965
182 Ga0495629_0000002 3300046459 Bacteria 686975
183 Ga0495629_0055803 3300046459 Unclassified 2763
184 Ga0495582_0048370 3300046473 Bacteria 2342
185 Ga0495608_0216705 3300046511 Bacteria 1202
186 Ga0495586_0001473 3300046535 Bacteria 12981
187 Ga0495635_0019058 3300046663 Bacteria 4790
188 Ga0495658_0006725 3300046683 Bacteria 5656
189 Ga0495600_0172475 3300046809 Bacteria 1396
190 Ga0495674_0406145 3300047319 Bacteria 1099
191 Ga0495680_0000828 3300047322 Bacteria 34386
192 Ga0495684_0295289 3300047471 Bacteria 1165
193 Ga0496102_0017111 3300048905 Bacteria 6347
194 Ga0496104_0005196 3300048907 Bacteria 11382
195 Ga0496105_0032637 3300048908 Unclassified 4274
196 Ga0496106_0014771 3300048909 Bacteria 5774
197 Ga0496108_0027741 3300048911 Unclassified 4679
198 Ga0496108_0315217 3300048911 Bacteria 1363
199 Ga0496109_0001290 3300048912 Bacteria 20786
200 Ga0496109_0095571 3300048912 Bacteria 2752
201 Ga0496110_0008036 3300048913 Bacteria 8459
202 Ga0496110_0032779 3300048913 Bacteria 4491
203 Ga0496110_0047148 3300048913 Bacteria 3772
204 Ga0496111_0009292 3300048914 Bacteria 6553
205 Ga0496112_0009872 3300048915 Bacteria 8629
206 Ga0496112_0027070 3300048915 Bacteria 5527
207 Ga0496113_0068780 3300048916 Unclassified 2688
208 Ga0496114_0186125 3300048917 Bacteria 1815
209 Ga0501031_0140038 3300049568 Bacteria 1581
210 Ga0501031_0162525 3300049568 Bacteria 1460
211 Ga0501034_0002491 3300049571 Bacteria 22102
212 Ga0501034_0118689 3300049571 Unclassified 2632
213 Ga0501036_0011012 3300049572 Bacteria 7481
214 Ga0501036_0456698 3300049572 Unclassified 1064
215 Ga0501036_0582514 3300049572 Unclassified 929
216 Ga0501038_0255741 3300049574 Bacteria 1386
217 Ga0501040_0008943 3300049576 Bacteria 6513
218 Ga0501040_0110760 3300049576 Bacteria 1920
219 Ga0501041_0057148 3300049577 Bacteria 2386
220 Ga0501042_0069058 3300049578 Bacteria 2527
221 Ga0501042_0206222 3300049578 Bacteria 1417
222 Ga0501046_0075230 3300049580 Bacteria 2619
223 Ga0501048_0035539 3300049582 Bacteria 3587
224 Ga0501067_0053082 3300049583 Bacteria 2246
225 Ga0501071_0006201 3300049587 Bacteria 7754
226 Ga0501071_0016739 3300049587 Bacteria 5043
227 Ga0501071_0077045 3300049587 Bacteria 2435
228 Ga0501071_0230147 3300049587 Bacteria 1396
229 Ga0501072_0009372 3300049588 Bacteria 7445
230 Ga0501072_0010004 3300049588 Bacteria 7213
231 Ga0501072_0012860 3300049588 Bacteria 6402
232 Ga0501072_0057426 3300049588 Bacteria 3067
233 Ga0501074_0113322 3300049590 Bacteria 1940
234 Ga0501075_0027566 3300049591 Bacteria 4187
235 Ga0501075_0039310 3300049591 Bacteria 3541
236 Ga0501075_0050747 3300049591 Bacteria 3119
237 Ga0501075_0142777 3300049591 Bacteria 1825
238 Ga0501076_0071340 3300049592 Bacteria 2778
239 Ga0501076_0111995 3300049592 Bacteria 2207
240 Ga0501076_0122554 3300049592 Bacteria 2105
241 Ga0501076_0281007 3300049592 Bacteria 1364
242 Ga0501077_0121333 3300049593 Bacteria 1657
243 Ga0501077_0252398 3300049593 Bacteria 1122
244 Ga0501245_015749 3300049708 Bacteria 1140
245 Ga0501079_0007892 3300049741 Bacteria 8066
246 Ga0501079_0185406 3300049741 Bacteria 1624
247 Ga0501080_0225091 3300049742 Bacteria 1716
248 Ga0501081_0080253 3300049743 Bacteria 2283
249 Ga0501081_0082771 3300049743 Unclassified 2249
250 Ga0501081_0154860 3300049743 Bacteria 1648
251 Ga0501083_0162273 3300049744 Bacteria 1462
252 Ga0501283_019753 3300049779 Bacteria 1068
253 Ga0501045_0002648 3300049824 Bacteria 12203
254 Ga0501045_0039356 3300049824 Bacteria 3440
255 nmdc:mga0yw44_4147_c1 3300050492 Bacteria 6583
256 nmdc:mga0k408_4679_c1 3300050493 Bacteria 7252
257 nmdc:mga06z11_79905_c1 3300050494 Bacteria 1752
258 nmdc:mga07m45_18593_c1 3300050496 Bacteria 3755
259 nmdc:mga05p37_10961_c1 3300050507 Bacteria 10766
260 nmdc:mga05p37_1796_c1 3300050507 Bacteria 25058
261 nmdc:mga05p37_182083_c1 3300050507 Bacteria 2555
262 nmdc:mga05p37_229223_c1 3300050507 Bacteria 2239
263 nmdc:mga05p37_317278_c1 3300050507 Bacteria 1846
264 nmdc:mga05p37_35784_c1 3300050507 Bacteria 6090
265 nmdc:mga05p37_405277_c1 3300050507 Bacteria 1591
266 nmdc:mga05p37_44837_c1 3300050507 Bacteria 5440
267 nmdc:mga05p37_565_c1 3300050507 Bacteria 40748
268 nmdc:mga05p37_87422_c1 3300050507 Bacteria 3841
269 nmdc:mga09592_126936_c1 3300050508 Bacteria 2193
270 nmdc:mga09592_3401_c1 3300050508 Bacteria 12863
271 nmdc:mga09592_41142_c1 3300050508 Bacteria 3885
272 nmdc:mga09592_4431_c1 3300050508 Bacteria 11368
273 nmdc:mga0qj67_17979_c1 3300050509 Bacteria 5383
274 nmdc:mga0qj67_4824_c1 3300050509 Bacteria 9800
275 nmdc:mga0qj67_69498_c1 3300050509 Unclassified 2809
276 nmdc:mga06r32_158210_c1 3300050510 Bacteria 2248
277 nmdc:mga06r32_175037_c1 3300050510 Bacteria 2130
278 nmdc:mga06r32_267757_c1 3300050510 Bacteria 1696
279 nmdc:mga06r32_43182_c1 3300050510 Bacteria 4289
280 nmdc:mga06r32_46180_c1 3300050510 Bacteria 4156
281 nmdc:mga06r32_516028_c1 3300050510 Unclassified 1171
282 nmdc:mga06r32_6534_c1 3300050510 Bacteria 10474
283 nmdc:mga06r32_80212_c1 3300050510 Bacteria 3175
284 nmdc:mga06r32_95669_c1 3300050510 Bacteria 2907
285 nmdc:mga08y16_13896_c1 3300050511 Bacteria 8472
286 nmdc:mga08y16_260241_c1 3300050511 Bacteria 1792
287 nmdc:mga08y16_262879_c1 3300050511 Bacteria 1782
288 nmdc:mga08y16_3637_c1 3300050511 Bacteria 16019
289 nmdc:mga08y16_511961_c1 3300050511 Bacteria 1218
290 nmdc:mga08y16_59215_c1 3300050511 Bacteria 4001
291 nmdc:mga08y16_60293_c1 3300050511 Bacteria 3963
292 nmdc:mga08y16_69726_c1 3300050511 Bacteria 3665
293 nmdc:mga08y16_865438_c1 3300050511 Bacteria 892
294 nmdc:mga0n895_157100_c1 3300050512 Bacteria 2305
295 nmdc:mga0n895_2150_c1 3300050512 Bacteria 15218
296 nmdc:mga0n895_215559_c1 3300050512 Bacteria 1949
297 nmdc:mga0n895_800434_c1 3300050512 Unclassified 933
298 nmdc:mga0a205_11492_c2 3300050515 Bacteria 5382
299 nmdc:mga0a205_37906_c1 3300050515 Bacteria 4635
300 nmdc:mga0a205_9299_c1 3300050515 Bacteria 8975
301 Ga0500566_0014334 3300053094 Bacteria 4661
302 Ga0501084_0095158 3300054114 Bacteria 2501
303 Ga0501084_0152692 3300054114 Bacteria 1947
304 Ga0501084_0507668 3300054114 Bacteria 1019
305 Ga0590071_000772 3300059421 Bacteria 8967
306 Ga0590074_002284 3300059423 Bacteria 3148
307 Ga0590075_000070 3300059424 Bacteria 25688
308 Ga0590075_037696 3300059424 Bacteria 1233
309 Ga0501082_0181089 3300060353 Bacteria 1833
310 Ga0501082_0298794 3300060353 Bacteria 1402
311 Ga0501082_0364664 3300060353 Bacteria 1260
312 Ga0530510_0001387 3300061734 Bacteria 16257

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046535 Ga0495586_0001473 Ga0495586_0001473_1400_2272 246
2 3300046683 Ga0495658_0006725 Ga0495658_0006725_201_1073 246
3 3300050511 nmdc:mga08y16_865438_c1 nmdc:mga08y16_865438_c1_124_882 246
4 3300050511 nmdc:mga08y16_60293_c1 nmdc:mga08y16_60293_c1_2808_3572 253
5 3300046663 Ga0495635_0019058 Ga0495635_0019058_39_812 256
6 3300046809 Ga0495600_0172475 Ga0495600_0172475_20_793 256
7 3300047322 Ga0495680_0000828 Ga0495680_0000828_17907_18680 256
8 3300047471 Ga0495684_0295289 Ga0495684_0295289_327_1100 256
9 3300031824 Ga0307413_10208830 Ga0307413_102088302 261
10 3300005345 Ga0070692_10003087 Ga0070692_100030872 265
11 3300005444 Ga0070694_100001092 Ga0070694_1000010922 265
12 3300005547 Ga0070693_100087093 Ga0070693_1000870932 265
13 3300006178 Ga0075367_10140121 Ga0075367_101401212 265
14 3300005441 Ga0070700_100274855 Ga0070700_1002748552 266
15 3300014326 Ga0157380_10034162 Ga0157380_100341623 266
16 3300005536 Ga0070697_100017228 Ga0070697_1000172283 267
17 3300006847 Ga0075431_100117956 Ga0075431_1001179562 268
18 3300049741 Ga0501079_0007892 Ga0501079_0007892_2022_2951 268
19 3300049742 Ga0501080_0225091 Ga0501080_0225091_484_1413 268
20 3300050510 nmdc:mga06r32_80212_c1 nmdc:mga06r32_80212_c1_1789_2655 268
21 3300005440 Ga0070705_100028397 Ga0070705_1000283973 269
22 3300005440 Ga0070705_100029859 Ga0070705_1000298593 269
23 3300005444 Ga0070694_100039054 Ga0070694_1000390543 269
24 3300005444 Ga0070694_100332682 Ga0070694_1003326821 269
25 3300005471 Ga0070698_100065993 Ga0070698_1000659932 269
26 3300005549 Ga0070704_100001929 Ga0070704_1000019298 269
27 3300006844 Ga0075428_100007708 Ga0075428_1000077086 269
28 3300006844 Ga0075428_100370185 Ga0075428_1003701852 269
29 3300006847 Ga0075431_100013973 Ga0075431_1000139732 269
30 3300006847 Ga0075431_100119197 Ga0075431_1001191972 269
31 3300009094 Ga0111539_10362017 Ga0111539_103620172 269
32 3300009147 Ga0114129_10003912 Ga0114129_100039128 269
33 3300009147 Ga0114129_10236925 Ga0114129_102369253 269
34 3300025922 Ga0207646_10445994 Ga0207646_104459942 269
35 3300026035 Ga0207703_10040994 Ga0207703_100409942 269
36 3300046459 Ga0495629_0000002 Ga0495629_0000002_651429_652301 269
37 3300046473 Ga0495582_0048370 Ga0495582_0048370_56_964 269
38 3300049588 Ga0501072_0012860 Ga0501072_0012860_2044_2973 269
39 3300049744 Ga0501083_0162273 Ga0501083_0162273_363_1232 269
40 3300050507 nmdc:mga05p37_182083_c1 nmdc:mga05p37_182083_c1_185_1039 269
41 3300050507 nmdc:mga05p37_317278_c1 nmdc:mga05p37_317278_c1_270_1166 269
42 3300050510 nmdc:mga06r32_175037_c1 nmdc:mga06r32_175037_c1_628_1485 269
43 3300050510 nmdc:mga06r32_267757_c1 nmdc:mga06r32_267757_c1_304_1164 269
44 3300050510 nmdc:mga06r32_43182_c1 nmdc:mga06r32_43182_c1_679_1575 269
45 3300050511 nmdc:mga08y16_260241_c1 nmdc:mga08y16_260241_c1_484_1338 269
46 3300053094 Ga0500566_0014334 Ga0500566_0014334_3732_4604 269
47 3300059423 Ga0590074_002284 Ga0590074_002284_139_981 270
48 3300059424 Ga0590075_000070 Ga0590075_000070_24012_24854 270
49 3300049571 Ga0501034_0118689 Ga0501034_0118689_1634_2467 273
50 3300049568 Ga0501031_0162525 Ga0501031_0162525_93_935 274
51 3300049576 Ga0501040_0110760 Ga0501040_0110760_150_992 274
52 3300049577 Ga0501041_0057148 Ga0501041_0057148_55_897 274
53 3300049580 Ga0501046_0075230 Ga0501046_0075230_927_1769 274
54 3300049587 Ga0501071_0230147 Ga0501071_0230147_319_1161 274
55 3300049588 Ga0501072_0057426 Ga0501072_0057426_478_1320 274
56 3300049592 Ga0501076_0281007 Ga0501076_0281007_237_1106 274
57 3300006178 Ga0075367_10030191 Ga0075367_100301912 275
58 3300006847 Ga0075431_100032456 Ga0075431_1000324564 275
59 3300014326 Ga0157380_10123685 Ga0157380_101236852 275
60 3300026121 Ga0207683_10082568 Ga0207683_100825682 275
61 3300049572 Ga0501036_0456698 Ga0501036_0456698_196_1023 275
62 3300049587 Ga0501071_0006201 Ga0501071_0006201_4298_5125 275
63 3300049588 Ga0501072_0010004 Ga0501072_0010004_3288_4115 275
64 3300049591 Ga0501075_0050747 Ga0501075_0050747_973_1800 275
65 3300049592 Ga0501076_0071340 Ga0501076_0071340_999_1826 275
66 3300049593 Ga0501077_0252398 Ga0501077_0252398_24_890 275
67 3300049743 Ga0501081_0082771 Ga0501081_0082771_429_1256 275
68 3300049824 Ga0501045_0002648 Ga0501045_0002648_3169_3996 275
69 3300050494 nmdc:mga06z11_79905_c1 nmdc:mga06z11_79905_c1_450_1328 275
70 3300050507 nmdc:mga05p37_405277_c1 nmdc:mga05p37_405277_c1_121_987 275
71 3300050510 nmdc:mga06r32_95669_c1 nmdc:mga06r32_95669_c1_324_1190 275
72 3300054114 Ga0501084_0152692 Ga0501084_0152692_672_1499 275
73 3300005290 Ga0065712_10236197 Ga0065712_102361971 276
74 3300005336 Ga0070680_100133926 Ga0070680_1001339262 276
75 3300005366 Ga0070659_100082386 Ga0070659_1000823862 276
76 3300005530 Ga0070679_100075986 Ga0070679_1000759862 276
77 3300005563 Ga0068855_100591855 Ga0068855_1005918552 276
78 3300006358 Ga0068871_100194817 Ga0068871_1001948172 276
79 3300006844 Ga0075428_100030531 Ga0075428_1000305312 276
80 3300006846 Ga0075430_100005957 Ga0075430_1000059576 276
81 3300006847 Ga0075431_100010197 Ga0075431_1000101978 276
82 3300006852 Ga0075433_10030070 Ga0075433_100300704 276
83 3300009147 Ga0114129_10000171 Ga0114129_100001717 276
84 3300009147 Ga0114129_10003059 Ga0114129_1000305926 276
85 3300013297 Ga0157378_10222961 Ga0157378_102229612 276
86 3300025917 Ga0207660_10108471 Ga0207660_101084712 276
87 3300025932 Ga0207690_10060421 Ga0207690_100604214 276
88 3300025949 Ga0207667_10526000 Ga0207667_105260002 276
89 3300046459 Ga0495629_0055803 Ga0495629_0055803_846_1676 276
90 3300048915 Ga0496112_0027070 Ga0496112_0027070_3144_3977 276
91 3300049578 Ga0501042_0069058 Ga0501042_0069058_281_1120 276
92 3300049587 Ga0501071_0077045 Ga0501071_0077045_1502_2341 276
93 3300049591 Ga0501075_0039310 Ga0501075_0039310_940_1779 276
94 3300050507 nmdc:mga05p37_35784_c1 nmdc:mga05p37_35784_c1_3770_4609 276
95 3300050507 nmdc:mga05p37_565_c1 nmdc:mga05p37_565_c1_26993_27832 276
96 3300050508 nmdc:mga09592_41142_c1 nmdc:mga09592_41142_c1_947_1816 276
97 3300050509 nmdc:mga0qj67_17979_c1 nmdc:mga0qj67_17979_c1_458_1327 276
98 3300050509 nmdc:mga0qj67_69498_c1 nmdc:mga0qj67_69498_c1_1673_2512 276
99 3300050515 nmdc:mga0a205_37906_c1 nmdc:mga0a205_37906_c1_3280_4119 276
100 3300002459 JGI24751J29686_10012444 JGI24751J29686_100124442 277
101 3300005290 Ga0065712_10110338 Ga0065712_101103382 277
102 3300005295 Ga0065707_10142133 Ga0065707_101421332 277
103 3300005329 Ga0070683_100000702 Ga0070683_10000070212 277
104 3300005329 Ga0070683_100061640 Ga0070683_1000616401 277
105 3300005329 Ga0070683_100084451 Ga0070683_1000844512 277
106 3300005331 Ga0070670_100003306 Ga0070670_1000033065 277
107 3300005331 Ga0070670_100012161 Ga0070670_1000121618 277
108 3300005331 Ga0070670_100021875 Ga0070670_1000218753 277
109 3300005331 Ga0070670_100073175 Ga0070670_1000731752 277
110 3300005331 Ga0070670_100195356 Ga0070670_1001953562 277
111 3300005334 Ga0068869_100667030 Ga0068869_1006670301 277
112 3300005344 Ga0070661_100027936 Ga0070661_1000279362 277
113 3300005347 Ga0070668_100158322 Ga0070668_1001583222 277
114 3300005353 Ga0070669_100042632 Ga0070669_1000426321 277
115 3300005353 Ga0070669_100151098 Ga0070669_1001510982 277
116 3300005354 Ga0070675_100276028 Ga0070675_1002760282 277
117 3300005354 Ga0070675_100375730 Ga0070675_1003757302 277
118 3300005355 Ga0070671_100060368 Ga0070671_1000603682 277
119 3300005367 Ga0070667_100042579 Ga0070667_1000425792 277
120 3300005444 Ga0070694_100086271 Ga0070694_1000862712 277
121 3300005455 Ga0070663_100021698 Ga0070663_1000216982 277
122 3300005455 Ga0070663_100181034 Ga0070663_1001810342 277
123 3300005457 Ga0070662_100084115 Ga0070662_1000841152 277
124 3300005458 Ga0070681_10191699 Ga0070681_101916992 277
125 3300005535 Ga0070684_100000068 Ga0070684_10000006831 277
126 3300005535 Ga0070684_100009549 Ga0070684_1000095496 277
127 3300005543 Ga0070672_100064563 Ga0070672_1000645632 277
128 3300005543 Ga0070672_100131552 Ga0070672_1001315522 277
129 3300005544 Ga0070686_100421883 Ga0070686_1004218831 277
130 3300005564 Ga0070664_100008127 Ga0070664_1000081275 277
131 3300005564 Ga0070664_100405208 Ga0070664_1004052082 277
132 3300005564 Ga0070664_100433311 Ga0070664_1004333112 277
133 3300005577 Ga0068857_100025150 Ga0068857_1000251503 277
134 3300005577 Ga0068857_100527208 Ga0068857_1005272082 277
135 3300005618 Ga0068864_100033212 Ga0068864_1000332123 277
136 3300005618 Ga0068864_100163595 Ga0068864_1001635952 277
137 3300005618 Ga0068864_100355487 Ga0068864_1003554872 277
138 3300005618 Ga0068864_100545741 Ga0068864_1005457411 277
139 3300005718 Ga0068866_10098847 Ga0068866_100988472 277
140 3300005840 Ga0068870_10031978 Ga0068870_100319782 277
141 3300005844 Ga0068862_100087836 Ga0068862_1000878362 277
142 3300006038 Ga0075365_10007190 Ga0075365_100071903 277
143 3300006048 Ga0075363_100042470 Ga0075363_1000424702 277
144 3300006051 Ga0075364_10045719 Ga0075364_100457193 277
145 3300006051 Ga0075364_10062555 Ga0075364_100625552 277
146 3300006177 Ga0075362_10000421 Ga0075362_100004216 277
147 3300006178 Ga0075367_10003356 Ga0075367_100033565 277
148 3300006195 Ga0075366_10013364 Ga0075366_100133644 277
149 3300006844 Ga0075428_100000080 Ga0075428_1000000808 277
150 3300006844 Ga0075428_100020594 Ga0075428_1000205949 277
151 3300006844 Ga0075428_100080083 Ga0075428_1000800832 277
152 3300006844 Ga0075428_100331786 Ga0075428_1003317862 277
153 3300006846 Ga0075430_100002473 Ga0075430_1000024738 277
154 3300006846 Ga0075430_100015832 Ga0075430_1000158324 277
155 3300006846 Ga0075430_100101527 Ga0075430_1001015273 277
156 3300006847 Ga0075431_100002515 Ga0075431_10000251517 277
157 3300006847 Ga0075431_100022383 Ga0075431_1000223834 277
158 3300006847 Ga0075431_100048147 Ga0075431_1000481474 277
159 3300006847 Ga0075431_100126183 Ga0075431_1001261832 277
160 3300006852 Ga0075433_10053986 Ga0075433_100539862 277
161 3300006871 Ga0075434_100010893 Ga0075434_1000108939 277
162 3300006871 Ga0075434_100092840 Ga0075434_1000928402 277
163 3300006871 Ga0075434_100448373 Ga0075434_1004483732 277
164 3300006880 Ga0075429_100000156 Ga0075429_10000015615 277
165 3300006880 Ga0075429_100012854 Ga0075429_1000128547 277
166 3300006880 Ga0075429_100084187 Ga0075429_1000841872 277
167 3300006880 Ga0075429_100098878 Ga0075429_1000988783 277
168 3300009093 Ga0105240_10172977 Ga0105240_101729772 277
169 3300009094 Ga0111539_10000181 Ga0111539_100001812 277
170 3300009094 Ga0111539_10009783 Ga0111539_100097834 277
171 3300009094 Ga0111539_10078671 Ga0111539_100786714 277
172 3300009094 Ga0111539_10141282 Ga0111539_101412823 277
173 3300009147 Ga0114129_10000077 Ga0114129_1000007765 277
174 3300009147 Ga0114129_10016371 Ga0114129_100163712 277
175 3300009147 Ga0114129_10053022 Ga0114129_100530221 277
176 3300009147 Ga0114129_10081213 Ga0114129_100812134 277
177 3300009147 Ga0114129_10136051 Ga0114129_101360512 277
178 3300009177 Ga0105248_10014318 Ga0105248_100143185 277
179 3300009553 Ga0105249_10001092 Ga0105249_1000109226 277
180 3300011119 Ga0105246_10183462 Ga0105246_101834622 277
181 3300013308 Ga0157375_10125163 Ga0157375_101251632 277
182 3300014325 Ga0163163_10026312 Ga0163163_100263122 277
183 3300014325 Ga0163163_10709360 Ga0163163_107093601 277
184 3300014326 Ga0157380_10303715 Ga0157380_103037152 277
185 3300014326 Ga0157380_10560413 Ga0157380_105604131 277
186 3300025315 Ga0207697_10004317 Ga0207697_100043176 277
187 3300025912 Ga0207707_10146904 Ga0207707_101469042 277
188 3300025920 Ga0207649_10019128 Ga0207649_100191285 277
189 3300025923 Ga0207681_10070998 Ga0207681_100709982 277
190 3300025925 Ga0207650_10008008 Ga0207650_100080083 277
191 3300025925 Ga0207650_10019605 Ga0207650_100196053 277
192 3300025925 Ga0207650_10038451 Ga0207650_100384512 277
193 3300025925 Ga0207650_10051504 Ga0207650_100515042 277
194 3300025925 Ga0207650_10301158 Ga0207650_103011582 277
195 3300025926 Ga0207659_10317746 Ga0207659_103177462 277
196 3300025931 Ga0207644_10147282 Ga0207644_101472822 277
197 3300025932 Ga0207690_10110006 Ga0207690_101100062 277
198 3300025933 Ga0207706_10070704 Ga0207706_100707042 277
199 3300025937 Ga0207669_10115278 Ga0207669_101152782 277
200 3300025940 Ga0207691_10092611 Ga0207691_100926112 277
201 3300025940 Ga0207691_10210408 Ga0207691_102104082 277
202 3300025941 Ga0207711_10037782 Ga0207711_100377825 277
203 3300025942 Ga0207689_10654560 Ga0207689_106545601 277
204 3300025944 Ga0207661_10002311 Ga0207661_1000231112 277
205 3300025945 Ga0207679_10002489 Ga0207679_100024895 277
206 3300025945 Ga0207679_10395865 Ga0207679_103958652 277
207 3300025972 Ga0207668_10236749 Ga0207668_102367492 277
208 3300025972 Ga0207668_10391644 Ga0207668_103916442 277
209 3300025986 Ga0207658_10162368 Ga0207658_101623682 277
210 3300026067 Ga0207678_10073992 Ga0207678_100739922 277
211 3300026067 Ga0207678_10083611 Ga0207678_100836112 277
212 3300026075 Ga0207708_10330541 Ga0207708_103305412 277
213 3300026089 Ga0207648_10456778 Ga0207648_104567782 277
214 3300026095 Ga0207676_10137842 Ga0207676_101378422 277
215 3300026095 Ga0207676_10173903 Ga0207676_101739032 277
216 3300026095 Ga0207676_10185062 Ga0207676_101850622 277
217 3300026116 Ga0207674_10060883 Ga0207674_100608832 277
218 3300026121 Ga0207683_10143178 Ga0207683_101431782 277
219 3300026121 Ga0207683_10206460 Ga0207683_102064601 277
220 3300026142 Ga0207698_10109335 Ga0207698_101093352 277
221 3300027907 Ga0207428_10000558 Ga0207428_100005588 277
222 3300027907 Ga0207428_10036204 Ga0207428_100362042 277
223 3300027907 Ga0207428_10068932 Ga0207428_100689323 277
224 3300031548 Ga0307408_100015321 Ga0307408_1000153213 277
225 3300031548 Ga0307408_100049470 Ga0307408_1000494702 277
226 3300031824 Ga0307413_10217717 Ga0307413_102177172 277
227 3300031903 Ga0307407_10337033 Ga0307407_103370331 277
228 3300031995 Ga0307409_100205674 Ga0307409_1002056742 277
229 3300031995 Ga0307409_100453946 Ga0307409_1004539462 277
230 3300032002 Ga0307416_100362451 Ga0307416_1003624512 277
231 3300036401 Ga0373937_0016058 Ga0373937_0016058_625_1464 277
232 3300042001 Ga0439441_012761 Ga0439441_012761_150_1001 277
233 3300042008 Ga0439450_000791 Ga0439450_000791_1358_2209 277
234 3300042436 Ga0439435_0003132 Ga0439435_0003132_1176_2027 277
235 3300042436 Ga0439435_0025643 Ga0439435_0025643_76_927 277
236 3300042439 Ga0439464_0006893 Ga0439464_0006893_223_1074 277
237 3300046511 Ga0495608_0216705 Ga0495608_0216705_318_1157 277
238 3300047319 Ga0495674_0406145 Ga0495674_0406145_170_1009 277
239 3300048905 Ga0496102_0017111 Ga0496102_0017111_5378_6223 277
240 3300048907 Ga0496104_0005196 Ga0496104_0005196_5036_5875 277
241 3300048908 Ga0496105_0032637 Ga0496105_0032637_2646_3485 277
242 3300048909 Ga0496106_0014771 Ga0496106_0014771_4852_5697 277
243 3300048911 Ga0496108_0027741 Ga0496108_0027741_1154_1993 277
244 3300048911 Ga0496108_0315217 Ga0496108_0315217_503_1336 277
245 3300048912 Ga0496109_0001290 Ga0496109_0001290_11358_12197 277
246 3300048912 Ga0496109_0095571 Ga0496109_0095571_1227_2072 277
247 3300048913 Ga0496110_0008036 Ga0496110_0008036_2708_3547 277
248 3300048913 Ga0496110_0032779 Ga0496110_0032779_3296_4141 277
249 3300048913 Ga0496110_0047148 Ga0496110_0047148_65_898 277
250 3300048914 Ga0496111_0009292 Ga0496111_0009292_2393_3232 277
251 3300048915 Ga0496112_0009872 Ga0496112_0009872_2054_2893 277
252 3300048916 Ga0496113_0068780 Ga0496113_0068780_203_1042 277
253 3300048917 Ga0496114_0186125 Ga0496114_0186125_932_1765 277
254 3300049568 Ga0501031_0140038 Ga0501031_0140038_350_1195 277
255 3300049571 Ga0501034_0002491 Ga0501034_0002491_2920_3756 277
256 3300049572 Ga0501036_0011012 Ga0501036_0011012_1394_2239 277
257 3300049572 Ga0501036_0582514 Ga0501036_0582514_35_886 277
258 3300049574 Ga0501038_0255741 Ga0501038_0255741_492_1337 277
259 3300049576 Ga0501040_0008943 Ga0501040_0008943_4348_5193 277
260 3300049578 Ga0501042_0206222 Ga0501042_0206222_270_1115 277
261 3300049582 Ga0501048_0035539 Ga0501048_0035539_936_1781 277
262 3300049583 Ga0501067_0053082 Ga0501067_0053082_606_1478 277
263 3300049587 Ga0501071_0016739 Ga0501071_0016739_202_1047 277
264 3300049588 Ga0501072_0009372 Ga0501072_0009372_4558_5403 277
265 3300049590 Ga0501074_0113322 Ga0501074_0113322_45_890 277
266 3300049591 Ga0501075_0027566 Ga0501075_0027566_1805_2650 277
267 3300049591 Ga0501075_0142777 Ga0501075_0142777_183_1055 277
268 3300049592 Ga0501076_0111995 Ga0501076_0111995_1294_2172 277
269 3300049592 Ga0501076_0122554 Ga0501076_0122554_312_1157 277
270 3300049593 Ga0501077_0121333 Ga0501077_0121333_18_890 277
271 3300049708 Ga0501245_015749 Ga0501245_015749_205_1056 277
272 3300049741 Ga0501079_0185406 Ga0501079_0185406_411_1256 277
273 3300049743 Ga0501081_0080253 Ga0501081_0080253_1425_2267 277
274 3300049743 Ga0501081_0154860 Ga0501081_0154860_212_1096 277
275 3300049779 Ga0501283_019753 Ga0501283_019753_87_938 277
276 3300049824 Ga0501045_0039356 Ga0501045_0039356_2199_3044 277
277 3300050492 nmdc:mga0yw44_4147_c1 nmdc:mga0yw44_4147_c1_3387_4223 277
278 3300050493 nmdc:mga0k408_4679_c1 nmdc:mga0k408_4679_c1_4511_5347 277
279 3300050496 nmdc:mga07m45_18593_c1 nmdc:mga07m45_18593_c1_1112_1948 277
280 3300050507 nmdc:mga05p37_10961_c1 nmdc:mga05p37_10961_c1_4736_5608 277
281 3300050507 nmdc:mga05p37_1796_c1 nmdc:mga05p37_1796_c1_16001_16852 277
282 3300050507 nmdc:mga05p37_229223_c1 nmdc:mga05p37_229223_c1_1297_2148 277
283 3300050507 nmdc:mga05p37_44837_c1 nmdc:mga05p37_44837_c1_325_1170 277
284 3300050507 nmdc:mga05p37_87422_c1 nmdc:mga05p37_87422_c1_1708_2547 277
285 3300050508 nmdc:mga09592_126936_c1 nmdc:mga09592_126936_c1_877_1716 277
286 3300050508 nmdc:mga09592_3401_c1 nmdc:mga09592_3401_c1_9041_9892 277
287 3300050508 nmdc:mga09592_4431_c1 nmdc:mga09592_4431_c1_5394_6245 277
288 3300050509 nmdc:mga0qj67_4824_c1 nmdc:mga0qj67_4824_c1_2878_3729 277
289 3300050510 nmdc:mga06r32_158210_c1 nmdc:mga06r32_158210_c1_79_930 277
290 3300050510 nmdc:mga06r32_46180_c1 nmdc:mga06r32_46180_c1_2279_3118 277
291 3300050510 nmdc:mga06r32_516028_c1 nmdc:mga06r32_516028_c1_16_861 277
292 3300050510 nmdc:mga06r32_6534_c1 nmdc:mga06r32_6534_c1_298_1149 277
293 3300050511 nmdc:mga08y16_13896_c1 nmdc:mga08y16_13896_c1_5285_6124 277
294 3300050511 nmdc:mga08y16_262879_c1 nmdc:mga08y16_262879_c1_700_1536 277
295 3300050511 nmdc:mga08y16_3637_c1 nmdc:mga08y16_3637_c1_13334_14185 277
296 3300050511 nmdc:mga08y16_511961_c1 nmdc:mga08y16_511961_c1_337_1188 277
297 3300050511 nmdc:mga08y16_59215_c1 nmdc:mga08y16_59215_c1_1834_2739 277
298 3300050511 nmdc:mga08y16_69726_c1 nmdc:mga08y16_69726_c1_480_1331 277
299 3300050512 nmdc:mga0n895_157100_c1 nmdc:mga0n895_157100_c1_1439_2275 277
300 3300050512 nmdc:mga0n895_2150_c1 nmdc:mga0n895_2150_c1_2654_3490 277
301 3300050512 nmdc:mga0n895_215559_c1 nmdc:mga0n895_215559_c1_296_1132 277
302 3300050512 nmdc:mga0n895_800434_c1 nmdc:mga0n895_800434_c1_59_895 277
303 3300050515 nmdc:mga0a205_11492_c2 nmdc:mga0a205_11492_c2_3332_4171 277
304 3300050515 nmdc:mga0a205_9299_c1 nmdc:mga0a205_9299_c1_6959_7804 277
305 3300054114 Ga0501084_0095158 Ga0501084_0095158_269_1114 277
306 3300054114 Ga0501084_0507668 Ga0501084_0507668_144_986 277
307 3300059421 Ga0590071_000772 Ga0590071_000772_7445_8287 277
308 3300059424 Ga0590075_037696 Ga0590075_037696_45_893 277
309 3300060353 Ga0501082_0181089 Ga0501082_0181089_934_1812 277
310 3300060353 Ga0501082_0298794 Ga0501082_0298794_365_1237 277
311 3300060353 Ga0501082_0364664 Ga0501082_0364664_397_1242 277
312 3300061734 Ga0530510_0001387 Ga0530510_0001387_4962_5807 277

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00494

SQS_PSY

Squalene/phytoene synthase

22

300

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5iys-assembly1.cif.gz_A crystal structure of a dehydrosqualene synthase in complex with ligand 0.8911 3 273
4hd1-assembly1.cif.gz_A crystal structure of squalene synthase hpnc from alicyclobacillus acidocaldarius 0.8727 6 247
2zcr-assembly1.cif.gz_A crystal structure of the c(30) carotenoid dehydrosqualene synthase from staphylococcus aureus complexed with bisphosphonate bph-698 0.8683 6 270
2zy1-assembly1.cif.gz_A crystal structure of the c(30) carotenoid dehydrosqualene synthase from staphylococcus aureus complexed with bisphosphonate bph-830 0.8677 3 270
4ea1-assembly1.cif.gz_A co-crystal structure of dehydrosqualene synthase (crtm) from s. aureus with sq-109 0.8659 3 270
ID Description Score Start End Superfamily
af_Q330K2_57_309_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9208 3 249 1.10.600.10
af_P9WHP3_1_280_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8909 3 269 1.10.600.10
af_Q330K2_57_309_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.879 3 249 1.10.600.10
4hd1A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8724 6 249 1.10.600.10
af_Q54E48_68_332_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8646 1 249 1.10.600.10
ID Description Score Start End GO Terms
AF-A0A1E3Y4B6-F1-model_v4 Squalene synthase HpnD 0.982 1 270 GO:0004311
GO:0016117
GO:0051996
AF-A0A1E3Y4B6-F1-model_v4 Squalene synthase HpnD 0.9643 1 270 GO:0004311
GO:0016117
GO:0051996
AF-A0A534TDL6-F1-model_v4 Presqualene diphosphate synthase HpnD (EC 2.5.1.103) 0.9641 2 273 GO:0004311
GO:0016117
GO:0016767
GO:0051996
AF-A0A382HPG3-F1-model_v4 Squalene synthase HpnD 0.9614 70 273 GO:0008299
GO:0051996
AF-A0A2E8WFS4-F1-model_v4 Squalene synthase HpnD 0.9608 4 270 GO:0004311
GO:0016117
GO:0016767
GO:0051996

Feature Viewer

pLDDT pTM Quality
92.06 0.9 High
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Predicted Structure (AlphaFold2)

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