F401786

General Info

Members Datasets Scaffolds Average Seq Length
312 213 624 399

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0156871|Ga0373925_0156871_498_1703
Length 395
Sequence MTRYAYICDAVRTPFGRYGGALSGVRADDLGAIPLAALMARNPKLDWQAVSDVIFGCANQAGEDNRNVARMSALLAGLPLEVPGSTVNRLCGSGLDALGTAARAIRSGDADLMIAGGVESMSRAPFVMPKAESAFSRANRVEDTTIGWRFVNRLMKERFGVDSMPETAENVATEFKIEREAQDRMALASQQRRGFFDAEIAPVSIPQKKGEAIVVARDEHPRDTSLETLSRLKGVVRPDGTVTAGNASGVNDGACALLLASEAAAVKHGLTPRARVVGMATAGVPPRIMGMGPAPATRKVLELTGLTLAQLDVIELNEAFAAQGLAVLRDLGLRDDDPRVNPNGGAIALGHPLGASGARLATTAVNQLHATGGRYALLTMCIGVGQGIAVVLERA

Samples

Sample ID Description Type Environment
1 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
16 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
64 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027252 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
121 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
122 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
132 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
133 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
138 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
142 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
147 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
150 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
151 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
152 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
153 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
154 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
155 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
156 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
157 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
158 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
159 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
160 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
161 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
162 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
165 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
166 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
167 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
168 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
169 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
174 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
175 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
187 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
190 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
191 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
192 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
193 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
194 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
195 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
198 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
199 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
200 2547132374 Acidovorax radicis N35 Isolate Unclassified
201 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
202 2643221570 Acidovorax sp. Root568 Isolate Unclassified
203 2643221596 Acidovorax sp. Root70 Isolate Unclassified
204 2643221609 Acidovorax sp. Root217 Isolate Unclassified
205 2643221611 Acidovorax sp. Root219 Isolate Unclassified
206 2643221660 Methylibium sp. Root1272 Isolate Unclassified
207 2643221717 Acidovorax sp. Root267 Isolate Unclassified
208 2738543012 Acidovorax sp. CF301 Isolate Unclassified
209 2816332133 Acidovorax radicis 2721A Isolate Unclassified
210 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
211 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
212 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
213 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.55
Metatranscriptomes 0
Isolates 5.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.15
Nodule 1.28
Rhizoplane 0.32
Rhizosphere 65.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373925_0156871 3300037068 Bacteria 1790
2 JGI25155J39150_1000062 3300002704 Bacteria 70719
3 JGI25156J39149_1000010 3300002705 Bacteria 200080
4 JGI25156J39149_1000012 3300002705 Bacteria 194393
5 JGI25154J39366_1000027 3300002738 Bacteria 200075
6 JGI25154J39366_1000029 3300002738 Bacteria 194393
7 JGI25157J39369_1000014 3300002741 Bacteria 194393
8 JGI25157J39369_1000032 3300002741 Bacteria 140224
9 JGI25159J45721_1002305 3300002987 Bacteria 7342
10 JGI25151J46595_10004466 3300003187 Bacteria 7396
11 JGI25153J46596_10002497 3300003215 Bacteria 10565
12 JGI25160J50197_1001072 3300003354 Bacteria 14026
13 JGI25161J50226_1000013 3300003374 Bacteria 199086
14 Ga0055526_1002421 3300003771 Bacteria 12646
15 Ga0055526_1004532 3300003771 Bacteria 8306
16 Ga0055537_1000576 3300003773 Bacteria 20455
17 Ga0055537_1006629 3300003773 Bacteria 2905
18 Ga0055524_1000519 3300003775 Bacteria 29658
19 Ga0055536_1001260 3300003781 Bacteria 15591
20 Ga0055534_1001922 3300003784 Bacteria 7652
21 Ga0055528_1001047 3300003790 Bacteria 18233
22 Ga0055530_10001163 3300003791 Bacteria 20390
23 Ga0055540_1000067 3300003792 Bacteria 122108
24 Ga0055531_10000480 3300003794 Bacteria 36934
25 Ga0055543_1000239 3300004625 Bacteria 42667
26 Ga0065165_1015780 3300005262 Bacteria 2864
27 Ga0065704_10076102 3300005289 Bacteria 5265
28 Ga0070690_100035099 3300005330 Bacteria 3146
29 Ga0070670_100003048 3300005331 Bacteria 13863
30 Ga0070677_10000617 3300005333 Bacteria 11973
31 Ga0070677_10021215 3300005333 Bacteria 2380
32 Ga0068869_100064081 3300005334 Bacteria 2703
33 Ga0070666_10156147 3300005335 Bacteria 1593
34 Ga0068868_100005198 3300005338 Bacteria 9138
35 Ga0068868_100005854 3300005338 Bacteria 8669
36 Ga0070689_100109652 3300005340 Bacteria 2194
37 Ga0070669_100021242 3300005353 Bacteria 4639
38 Ga0070669_100041671 3300005353 Bacteria 3340
39 Ga0070675_100000275 3300005354 Bacteria 34094
40 Ga0070675_100001476 3300005354 Bacteria 17343
41 Ga0070675_100001755 3300005354 Bacteria 15992
42 Ga0070675_100039073 3300005354 Bacteria 3870
43 Ga0070671_100002243 3300005355 Bacteria 14919
44 Ga0070674_100011982 3300005356 Bacteria 5307
45 Ga0070674_100048998 3300005356 Bacteria 2902
46 Ga0070673_100000664 3300005364 Bacteria 18943
47 Ga0070673_100000735 3300005364 Bacteria 18144
48 Ga0070673_100038702 3300005364 Bacteria 3643
49 Ga0070673_100052721 3300005364 Bacteria 3192
50 Ga0070667_100028305 3300005367 Bacteria 4665
51 Ga0070667_100074387 3300005367 Bacteria 2898
52 Ga0070667_100232909 3300005367 Bacteria 1643
53 Ga0070678_100024622 3300005456 Bacteria 4035
54 Ga0070662_100170777 3300005457 Bacteria 1708
55 Ga0068867_100000334 3300005459 Bacteria 31176
56 Ga0068867_100008776 3300005459 Bacteria 7138
57 Ga0068867_100027996 3300005459 Bacteria 4054
58 Ga0068867_100037287 3300005459 Bacteria 3533
59 Ga0068867_100117996 3300005459 Bacteria 2046
60 Ga0070672_100000355 3300005543 Bacteria 26388
61 Ga0070672_100003640 3300005543 Bacteria 10009
62 Ga0068855_100126100 3300005563 Bacteria 2927
63 Ga0070664_100210857 3300005564 Bacteria 1736
64 Ga0068857_100165257 3300005577 Bacteria 2010
65 Ga0068864_100004009 3300005618 Bacteria 12121
66 Ga0068864_100028959 3300005618 Bacteria 4686
67 Ga0068864_100055599 3300005618 Bacteria 3418
68 Ga0068858_100004960 3300005842 Bacteria 13039
69 Ga0075365_10040475 3300006038 Bacteria 3039
70 Ga0075368_10002455 3300006042 Bacteria 6055
71 Ga0075362_10003596 3300006177 Bacteria 5449
72 Ga0075367_10003379 3300006178 Bacteria 7597
73 Ga0075366_10001675 3300006195 Bacteria 11121
74 Ga0097621_100001599 3300006237 Bacteria 15496
75 Ga0097621_100056034 3300006237 Bacteria 3220
76 Ga0097621_100085590 3300006237 Bacteria 2629
77 Ga0068865_100017843 3300006881 Bacteria 4570
78 Ga0068865_100125105 3300006881 Bacteria 1918
79 Ga0079104_1007111 3300006946 Bacteria 4114
80 Ga0105240_10016087 3300009093 Bacteria 10135
81 Ga0105248_10013903 3300009177 Bacteria 8856
82 Ga0105237_10000076 3300009545 Bacteria 131773
83 Ga0105238_10003287 3300009551 Bacteria 16142
84 Ga0105239_10006566 3300010375 Bacteria 13472
85 Ga0163162_10167869 3300013306 Bacteria 2318
86 Ga0157375_10061560 3300013308 Bacteria 3727
87 Ga0163163_10005059 3300014325 Bacteria 11366
88 Ga0157377_10153488 3300014745 Bacteria 1426
89 Ga0163161_10003588 3300017792 Bacteria 10873
90 Ga0163161_10110002 3300017792 Bacteria 2059
91 Ga0209435_100002 3300025206 Bacteria 794178
92 Ga0209435_100003 3300025206 Bacteria 669534
93 Ga0207425_1001894 3300025245 Bacteria 7975
94 Ga0209646_1000001 3300025246 Bacteria 3092932
95 Ga0209646_1000008 3300025246 Bacteria 669534
96 Ga0209026_1000007 3300025250 Bacteria 669534
97 Ga0209026_1000040 3300025250 Bacteria 277470
98 Ga0209759_1000001 3300025256 Bacteria 2799452
99 Ga0209759_1000019 3300025256 Bacteria 357908
100 Ga0209129_1008654 3300025258 Bacteria 2798
101 Ga0209565_1000111 3300025263 Bacteria 117862
102 Ga0209565_1004904 3300025263 Bacteria 3989
103 Ga0209673_1000012 3300025273 Bacteria 579480
104 Ga0209130_1000095 3300025284 Bacteria 145126
105 Ga0209130_1001113 3300025284 Bacteria 19768
106 Ga0209675_1000373 3300025291 Bacteria 38099
107 Ga0209675_1004344 3300025291 Bacteria 6347
108 Ga0209675_1013909 3300025291 Bacteria 2482
109 Ga0209676_1000145 3300025292 Bacteria 174391
110 Ga0209676_1007092 3300025292 Bacteria 5363
111 Ga0209025_1003004 3300025294 Bacteria 16678
112 Ga0209025_1013182 3300025294 Bacteria 5219
113 Ga0209564_1002035 3300025295 Bacteria 17497
114 Ga0209564_1005377 3300025295 Bacteria 7341
115 Ga0209758_1000089 3300025297 Bacteria 251523
116 Ga0209758_1023004 3300025297 Bacteria 2834
117 Ga0209050_1000023 3300025298 Bacteria 537172
118 Ga0209256_1000003 3300025299 Bacteria 1661127
119 Ga0207426_1001496 3300025302 Bacteria 19140
120 Ga0207426_1004536 3300025302 Bacteria 6717
121 Ga0209051_1000017 3300025303 Bacteria 537172
122 Ga0209257_1000041 3300025304 Bacteria 537172
123 Ga0209257_1036926 3300025304 Bacteria 1495
124 Ga0207697_10004849 3300025315 Bacteria 6351
125 Ga0207656_10084988 3300025321 Bacteria 1428
126 Ga0207682_10004172 3300025893 Bacteria 6110
127 Ga0207682_10008164 3300025893 Bacteria 4152
128 Ga0207680_10076830 3300025903 Bacteria 2086
129 Ga0207645_10010249 3300025907 Bacteria 6440
130 Ga0207684_10173850 3300025910 Bacteria 1857
131 Ga0207707_10105602 3300025912 Bacteria 2462
132 Ga0207695_10091270 3300025913 Bacteria 3060
133 Ga0207671_10018639 3300025914 Bacteria 5319
134 Ga0207660_10078246 3300025917 Bacteria 2423
135 Ga0207681_10010598 3300025923 Bacteria 5651
136 Ga0207681_10031951 3300025923 Bacteria 3442
137 Ga0207681_10102819 3300025923 Bacteria 2064
138 Ga0207650_10000275 3300025925 Bacteria 53824
139 Ga0207650_10001940 3300025925 Bacteria 14570
140 Ga0207650_10005144 3300025925 Bacteria 8930
141 Ga0207659_10000184 3300025926 Bacteria 37154
142 Ga0207659_10000913 3300025926 Bacteria 17608
143 Ga0207659_10002294 3300025926 Bacteria 11401
144 Ga0207659_10035852 3300025926 Bacteria 3432
145 Ga0207659_10041532 3300025926 Bacteria 3221
146 Ga0207670_10058624 3300025936 Bacteria 2616
147 Ga0207669_10000704 3300025937 Bacteria 14418
148 Ga0207669_10008361 3300025937 Bacteria 4853
149 Ga0207669_10014677 3300025937 Bacteria 3933
150 Ga0207691_10001564 3300025940 Bacteria 22724
151 Ga0207691_10006621 3300025940 Bacteria 11183
152 Ga0207711_10174245 3300025941 Bacteria 1953
153 Ga0207689_10077692 3300025942 Bacteria 2728
154 Ga0207679_10019993 3300025945 Bacteria 4511
155 Ga0207651_10009913 3300025960 Bacteria 5245
156 Ga0207651_10018079 3300025960 Bacteria 4185
157 Ga0207651_10171504 3300025960 Bacteria 1711
158 Ga0207668_10189339 3300025972 Bacteria 1629
159 Ga0207640_10054898 3300025981 Bacteria 2607
160 Ga0207658_10034432 3300025986 Bacteria 3620
161 Ga0207658_10096667 3300025986 Bacteria 2304
162 Ga0207677_10011204 3300026023 Bacteria 5103
163 Ga0207677_10024779 3300026023 Bacteria 3733
164 Ga0207703_10044274 3300026035 Bacteria 3576
165 Ga0207641_10013292 3300026088 Bacteria 6753
166 Ga0207648_10001278 3300026089 Bacteria 28107
167 Ga0207648_10007371 3300026089 Bacteria 10833
168 Ga0207648_10017122 3300026089 Bacteria 6604
169 Ga0207676_10004493 3300026095 Bacteria 9862
170 Ga0207676_10042647 3300026095 Bacteria 3490
171 Ga0207674_10095977 3300026116 Bacteria 2950
172 Ga0207683_10005769 3300026121 Bacteria 10613
173 Ga0207683_10011546 3300026121 Bacteria 7541
174 Ga0207683_10038752 3300026121 Bacteria 4156
175 Ga0207698_10061142 3300026142 Bacteria 2933
176 Ga0209973_1002525 3300027252 Bacteria 1723
177 Ga0209968_1000616 3300027526 Bacteria 5513
178 Ga0209966_1000040 3300027695 Bacteria 54404
179 Ga0209813_10000065 3300027866 Bacteria 42169
180 Ga0307515_10000244 3300028794 Bacteria 134791
181 Ga0307515_10083840 3300028794 Bacteria 4103
182 Ga0265332_10000022 3300031238 Bacteria 213072
183 Ga0307513_10000104 3300031456 Bacteria 119239
184 Ga0307513_10000113 3300031456 Bacteria 114576
185 Ga0307513_10004737 3300031456 Bacteria 18072
186 Ga0307513_10010542 3300031456 Bacteria 11568
187 Ga0307508_10000440 3300031616 Bacteria 49668
188 Ga0307514_10009251 3300031649 Bacteria 8305
189 Ga0307514_10022167 3300031649 Bacteria 5167
190 Ga0265342_10045359 3300031712 Bacteria 2646
191 Ga0307516_10000705 3300031730 Bacteria 45448
192 Ga0307516_10036791 3300031730 Bacteria 4897
193 Ga0307405_10046526 3300031731 Bacteria 2666
194 Ga0307413_10034154 3300031824 Bacteria 2904
195 Ga0307410_10046293 3300031852 Bacteria 2901
196 Ga0307406_10002734 3300031901 Bacteria 9620
197 Ga0307412_10004509 3300031911 Bacteria 7760
198 Ga0307412_10024191 3300031911 Bacteria 3747
199 Ga0307412_10030760 3300031911 Bacteria 3384
200 Ga0307409_100004629 3300031995 Bacteria 7771
201 Ga0307416_100008304 3300032002 Bacteria 6686
202 Ga0307416_100241364 3300032002 Bacteria 1751
203 Ga0307411_10086259 3300032005 Bacteria 2177
204 Ga0307411_10112126 3300032005 Bacteria 1954
205 Ga0373927_0089324 3300035695 Bacteria 2001
206 Ga0373937_0225499 3300036401 Bacteria 1764
207 Ga0395899_0005495 3300037312 Bacteria 9820
208 Ga0395899_0014356 3300037312 Bacteria 6046
209 Ga0395900_0014642 3300037418 Bacteria 7998
210 Ga0395898_0007105 3300037466 Bacteria 11892
211 Ga0395898_0050935 3300037466 Bacteria 4050
212 Ga0395905_0000090 3300037471 Bacteria 152117
213 Ga0395905_0000532 3300037471 Bacteria 52229
214 Ga0395905_0000856 3300037471 Bacteria 39764
215 Ga0395905_0038916 3300037471 Bacteria 4461
216 Ga0395905_0157506 3300037471 Bacteria 2135
217 Ga0395901_0027714 3300038443 Bacteria 5824
218 Ga0395901_0043675 3300038443 Bacteria 4648
219 Ga0395901_0317506 3300038443 Bacteria 1612
220 Ga0436365_1568584 3300039437 Bacteria 3071
221 Ga0451577_0029019 3300042876 Bacteria 5002
222 Ga0466972_0016332 3300044658 Bacteria 3711
223 Ga0466966_0001980 3300044684 Bacteria 13277
224 Ga0451576_0011400 3300045051 Bacteria 10104
225 Ga0451576_0162125 3300045051 Bacteria 2334
226 Ga0495590_0043554 3300046457 Bacteria 1565
227 Ga0495638_0019754 3300046460 Bacteria 4454
228 Ga0495638_0077355 3300046460 Bacteria 2026
229 Ga0495650_0000164 3300046471 Bacteria 147142
230 Ga0495650_0003963 3300046471 Bacteria 10407
231 Ga0495584_0000179 3300046491 Bacteria 44738
232 Ga0495585_0009223 3300046492 Bacteria 5933
233 Ga0495583_0000014 3300046506 Bacteria 320136
234 Ga0495583_0005946 3300046506 Bacteria 8101
235 Ga0495606_0000037 3300046507 Bacteria 231282
236 Ga0495616_0008314 3300046513 Bacteria 6155
237 Ga0495644_0000087 3300046523 Bacteria 46212
238 Ga0495648_0000476 3300046524 Bacteria 43122
239 Ga0495648_0060343 3300046524 Bacteria 2257
240 Ga0495609_0004460 3300046538 Bacteria 7653
241 Ga0495609_0038668 3300046538 Bacteria 2150
242 Ga0495622_0000024 3300046557 Bacteria 154056
243 Ga0495656_0002471 3300046615 Bacteria 6150
244 Ga0495656_0011919 3300046615 Bacteria 3199
245 Ga0495611_0000769 3300046648 Bacteria 17966
246 Ga0495625_0009988 3300046660 Bacteria 7894
247 Ga0495659_0000325 3300046664 Bacteria 18827
248 Ga0495661_0006832 3300046665 Bacteria 7989
249 Ga0495661_0019044 3300046665 Bacteria 4502
250 Ga0495670_0000064 3300046691 Bacteria 47436
251 Ga0495649_0000978 3300046694 Bacteria 22513
252 Ga0495660_0032193 3300046810 Bacteria 2945
253 Ga0495660_0106531 3300046810 Bacteria 1436
254 Ga0495636_0000067 3300047318 Bacteria 44261
255 Ga0495636_0000559 3300047318 Bacteria 13656
256 Ga0495683_0002883 3300047323 Bacteria 10174
257 Ga0495687_000566 3300047443 Bacteria 43606
258 Ga0495687_000603 3300047443 Bacteria 42021
259 Ga0495687_022259 3300047443 Bacteria 3046
260 Ga0495677_0000604 3300047445 Bacteria 14689
261 Ga0495677_0001554 3300047445 Bacteria 9260
262 Ga0495685_000020 3300047447 Bacteria 73280
263 Ga0495685_000155 3300047447 Bacteria 23330
264 Ga0495673_0006559 3300047469 Bacteria 6823
265 Ga0496106_0064161 3300048909 Bacteria 2794
266 Ga0496121_0064901 3300048924 Bacteria 2974
267 Ga0496124_0003937 3300048927 Bacteria 17744
268 Ga0495678_000721 3300049459 Bacteria 30019
269 Ga0495682_0006557 3300049460 Bacteria 4702
270 Ga0501032_0029970 3300049569 Bacteria 3732
271 Ga0501034_0003004 3300049571 Bacteria 19506
272 Ga0501043_0000277 3300049579 Bacteria 46284
273 Ga0501043_0019152 3300049579 Bacteria 5373
274 Ga0501046_0000345 3300049580 Bacteria 46730
275 Ga0501047_0000070 3300049581 Bacteria 127146
276 Ga0501047_0000395 3300049581 Bacteria 48969
277 Ga0501048_0000111 3300049582 Bacteria 46009
278 Ga0501035_0313177 3300049822 Bacteria 1320
279 nmdc:mga03683_528_c1 3300050489 Bacteria 10945
280 nmdc:mga03n38_9302_c1 3300050490 Bacteria 3568
281 nmdc:mga00v17_14055_c1 3300050491 Bacteria 4461
282 nmdc:mga0k408_1030_c1 3300050493 Bacteria 11150
283 nmdc:mga0k408_46399_c1 3300050493 Bacteria 2509
284 nmdc:mga06z11_345_c1 3300050494 Bacteria 17485
285 nmdc:mga04h51_533_c1 3300050495 Bacteria 9036
286 nmdc:mga07m45_23_c1 3300050496 Bacteria 115627
287 Ga0500643_010114 3300053087 Bacteria 3540
288 Ga0500651_0018685 3300053093 Bacteria 4294
289 Ga0500607_023841 3300053121 Bacteria 3423
290 Ga0500642_0003090 3300053130 Bacteria 4980
291 Ga0500619_000062 3300053154 Bacteria 32808
292 Ga0500624_000065 3300053157 Bacteria 63944
293 Ga0500636_0009208 3300053177 Bacteria 5738
294 Ga0500645_000242 3300053730 Bacteria 40854
295 Ga0500645_027706 3300053730 Bacteria 1717
296 2511242872 2511231002 Bacteria 5042903
297 2513558825 2513237082 Bacteria 8640282
298 2513566717 2513237083 Bacteria 8410967
299 2548497705 2547132374 Bacteria 5530232
300 2587734061 2585428058 Bacteria 6853932
301 2643867149 2643221570 Bacteria 5103772
302 2643990084 2643221596 Bacteria 5006805
303 2644059393 2643221609 Bacteria 6756331
304 2644074162 2643221611 Bacteria 6820941
305 2644338883 2643221660 Bacteria 4208257
306 2644645112 2643221717 Bacteria 5676132
307 2739240905 2738543012 Bacteria 7115078
308 2816472011 2816332133 Bacteria 7249298
309 2881101437 2881101125 Bacteria 4590519
310 2895518505 2895511927 Bacteria 6802080
311 2990711257 2990710928 Bacteria 5002431
312 8003962955 8003955200 Bacteria 8601927
313 Ga0373925_0156871
314 JGI25155J39150_1000062
315 JGI25156J39149_1000010
316 JGI25156J39149_1000012
317 JGI25154J39366_1000027
318 JGI25154J39366_1000029
319 JGI25157J39369_1000014
320 JGI25157J39369_1000032
321 JGI25159J45721_1002305
322 JGI25151J46595_10004466
323 JGI25153J46596_10002497
324 JGI25160J50197_1001072
325 JGI25161J50226_1000013
326 Ga0055526_1002421
327 Ga0055526_1004532
328 Ga0055537_1000576
329 Ga0055537_1006629
330 Ga0055524_1000519
331 Ga0055536_1001260
332 Ga0055534_1001922
333 Ga0055528_1001047
334 Ga0055530_10001163
335 Ga0055540_1000067
336 Ga0055531_10000480
337 Ga0055543_1000239
338 Ga0065165_1015780
339 Ga0065704_10076102
340 Ga0070690_100035099
341 Ga0070670_100003048
342 Ga0070677_10000617
343 Ga0070677_10021215
344 Ga0068869_100064081
345 Ga0070666_10156147
346 Ga0068868_100005198
347 Ga0068868_100005854
348 Ga0070689_100109652
349 Ga0070669_100021242
350 Ga0070669_100041671
351 Ga0070675_100000275
352 Ga0070675_100001476
353 Ga0070675_100001755
354 Ga0070675_100039073
355 Ga0070671_100002243
356 Ga0070674_100011982
357 Ga0070674_100048998
358 Ga0070673_100000664
359 Ga0070673_100000735
360 Ga0070673_100038702
361 Ga0070673_100052721
362 Ga0070667_100028305
363 Ga0070667_100074387
364 Ga0070667_100232909
365 Ga0070678_100024622
366 Ga0070662_100170777
367 Ga0068867_100000334
368 Ga0068867_100008776
369 Ga0068867_100027996
370 Ga0068867_100037287
371 Ga0068867_100117996
372 Ga0070672_100000355
373 Ga0070672_100003640
374 Ga0068855_100126100
375 Ga0070664_100210857
376 Ga0068857_100165257
377 Ga0068864_100004009
378 Ga0068864_100028959
379 Ga0068864_100055599
380 Ga0068858_100004960
381 Ga0075365_10040475
382 Ga0075368_10002455
383 Ga0075362_10003596
384 Ga0075367_10003379
385 Ga0075366_10001675
386 Ga0097621_100001599
387 Ga0097621_100056034
388 Ga0097621_100085590
389 Ga0068865_100017843
390 Ga0068865_100125105
391 Ga0079104_1007111
392 Ga0105240_10016087
393 Ga0105248_10013903
394 Ga0105237_10000076
395 Ga0105238_10003287
396 Ga0105239_10006566
397 Ga0163162_10167869
398 Ga0157375_10061560
399 Ga0163163_10005059
400 Ga0157377_10153488
401 Ga0163161_10003588
402 Ga0163161_10110002
403 Ga0209435_100002
404 Ga0209435_100003
405 Ga0207425_1001894
406 Ga0209646_1000001
407 Ga0209646_1000008
408 Ga0209026_1000007
409 Ga0209026_1000040
410 Ga0209759_1000001
411 Ga0209759_1000019
412 Ga0209129_1008654
413 Ga0209565_1000111
414 Ga0209565_1004904
415 Ga0209673_1000012
416 Ga0209130_1000095
417 Ga0209130_1001113
418 Ga0209675_1000373
419 Ga0209675_1004344
420 Ga0209675_1013909
421 Ga0209676_1000145
422 Ga0209676_1007092
423 Ga0209025_1003004
424 Ga0209025_1013182
425 Ga0209564_1002035
426 Ga0209564_1005377
427 Ga0209758_1000089
428 Ga0209758_1023004
429 Ga0209050_1000023
430 Ga0209256_1000003
431 Ga0207426_1001496
432 Ga0207426_1004536
433 Ga0209051_1000017
434 Ga0209257_1000041
435 Ga0209257_1036926
436 Ga0207697_10004849
437 Ga0207656_10084988
438 Ga0207682_10004172
439 Ga0207682_10008164
440 Ga0207680_10076830
441 Ga0207645_10010249
442 Ga0207684_10173850
443 Ga0207707_10105602
444 Ga0207695_10091270
445 Ga0207671_10018639
446 Ga0207660_10078246
447 Ga0207681_10010598
448 Ga0207681_10031951
449 Ga0207681_10102819
450 Ga0207650_10000275
451 Ga0207650_10001940
452 Ga0207650_10005144
453 Ga0207659_10000184
454 Ga0207659_10000913
455 Ga0207659_10002294
456 Ga0207659_10035852
457 Ga0207659_10041532
458 Ga0207670_10058624
459 Ga0207669_10000704
460 Ga0207669_10008361
461 Ga0207669_10014677
462 Ga0207691_10001564
463 Ga0207691_10006621
464 Ga0207711_10174245
465 Ga0207689_10077692
466 Ga0207679_10019993
467 Ga0207651_10009913
468 Ga0207651_10018079
469 Ga0207651_10171504
470 Ga0207668_10189339
471 Ga0207640_10054898
472 Ga0207658_10034432
473 Ga0207658_10096667
474 Ga0207677_10011204
475 Ga0207677_10024779
476 Ga0207703_10044274
477 Ga0207641_10013292
478 Ga0207648_10001278
479 Ga0207648_10007371
480 Ga0207648_10017122
481 Ga0207676_10004493
482 Ga0207676_10042647
483 Ga0207674_10095977
484 Ga0207683_10005769
485 Ga0207683_10011546
486 Ga0207683_10038752
487 Ga0207698_10061142
488 Ga0209973_1002525
489 Ga0209968_1000616
490 Ga0209966_1000040
491 Ga0209813_10000065
492 Ga0307515_10000244
493 Ga0307515_10083840
494 Ga0265332_10000022
495 Ga0307513_10000104
496 Ga0307513_10000113
497 Ga0307513_10004737
498 Ga0307513_10010542
499 Ga0307508_10000440
500 Ga0307514_10009251
501 Ga0307514_10022167
502 Ga0265342_10045359
503 Ga0307516_10000705
504 Ga0307516_10036791
505 Ga0307405_10046526
506 Ga0307413_10034154
507 Ga0307410_10046293
508 Ga0307406_10002734
509 Ga0307412_10004509
510 Ga0307412_10024191
511 Ga0307412_10030760
512 Ga0307409_100004629
513 Ga0307416_100008304
514 Ga0307416_100241364
515 Ga0307411_10086259
516 Ga0307411_10112126
517 Ga0373927_0089324
518 Ga0373937_0225499
519 Ga0395899_0005495
520 Ga0395899_0014356
521 Ga0395900_0014642
522 Ga0395898_0007105
523 Ga0395898_0050935
524 Ga0395905_0000090
525 Ga0395905_0000532
526 Ga0395905_0000856
527 Ga0395905_0038916
528 Ga0395905_0157506
529 Ga0395901_0027714
530 Ga0395901_0043675
531 Ga0395901_0317506
532 Ga0436365_1568584
533 Ga0451577_0029019
534 Ga0466972_0016332
535 Ga0466966_0001980
536 Ga0451576_0011400
537 Ga0451576_0162125
538 Ga0495590_0043554
539 Ga0495638_0019754
540 Ga0495638_0077355
541 Ga0495650_0000164
542 Ga0495650_0003963
543 Ga0495584_0000179
544 Ga0495585_0009223
545 Ga0495583_0000014
546 Ga0495583_0005946
547 Ga0495606_0000037
548 Ga0495616_0008314
549 Ga0495644_0000087
550 Ga0495648_0000476
551 Ga0495648_0060343
552 Ga0495609_0004460
553 Ga0495609_0038668
554 Ga0495622_0000024
555 Ga0495656_0002471
556 Ga0495656_0011919
557 Ga0495611_0000769
558 Ga0495625_0009988
559 Ga0495659_0000325
560 Ga0495661_0006832
561 Ga0495661_0019044
562 Ga0495670_0000064
563 Ga0495649_0000978
564 Ga0495660_0032193
565 Ga0495660_0106531
566 Ga0495636_0000067
567 Ga0495636_0000559
568 Ga0495683_0002883
569 Ga0495687_000566
570 Ga0495687_000603
571 Ga0495687_022259
572 Ga0495677_0000604
573 Ga0495677_0001554
574 Ga0495685_000020
575 Ga0495685_000155
576 Ga0495673_0006559
577 Ga0496106_0064161
578 Ga0496121_0064901
579 Ga0496124_0003937
580 Ga0495678_000721
581 Ga0495682_0006557
582 Ga0501032_0029970
583 Ga0501034_0003004
584 Ga0501043_0000277
585 Ga0501043_0019152
586 Ga0501046_0000345
587 Ga0501047_0000070
588 Ga0501047_0000395
589 Ga0501048_0000111
590 Ga0501035_0313177
591 nmdc:mga03683_528_c1
592 nmdc:mga03n38_9302_c1
593 nmdc:mga00v17_14055_c1
594 nmdc:mga0k408_1030_c1
595 nmdc:mga0k408_46399_c1
596 nmdc:mga06z11_345_c1
597 nmdc:mga04h51_533_c1
598 nmdc:mga07m45_23_c1
599 Ga0500643_010114
600 Ga0500651_0018685
601 Ga0500607_023841
602 Ga0500642_0003090
603 Ga0500619_000062
604 Ga0500624_000065
605 Ga0500636_0009208
606 Ga0500645_000242
607 Ga0500645_027706
608 2511242872
609 2513558825
610 2513566717
611 2548497705
612 2587734061
613 2643867149
614 2643990084
615 2644059393
616 2644074162
617 2644338883
618 2644645112
619 2739240905
620 2816472011
621 2881101437
622 2895518505
623 2990711257
624 8003962955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

270

394

0.96

PF00108

Thiolase_N

Thiolase, N-terminal domain

5

263

0.89

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

67

143

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pcd-assembly1.cif.gz_A crystal structure of beta-ketoadipyl-coa thiolase mutant (c90s-h356a) in complex octanoyl coenzyme a 0.9529 1 400
6pcc-assembly1.cif.gz_B crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex hexanoyl coenzyme a 0.9529 1 400
6pcc-assembly1.cif.gz_A crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex hexanoyl coenzyme a 0.9523 1 400
6pcc-assembly1.cif.gz_C crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex hexanoyl coenzyme a 0.9519 1 400
6pcd-assembly1.cif.gz_D crystal structure of beta-ketoadipyl-coa thiolase mutant (c90s-h356a) in complex octanoyl coenzyme a 0.9518 1 400
ID Description Score Start End Superfamily
af_O53871_287_399_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9815 282 394 3.40.47.10
af_A0A096MJY8_281_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9759 282 394 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9674 271 400 3.40.47.10
3svkB02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9659 167 396 3.40.47.10
5lp7F02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9626 166 396 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A257Y4U2-F1-model_v4 Beta-ketoadipyl CoA thiolase 0.995 265 400 GO:0003988
GO:0006635
GO:0010124
AF-A0A2H6HFU3-F1-model_v4 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.174) 0.9938 285 400 GO:0006635
GO:0010124
GO:0033812
AF-A0A4Q6EKK0-F1-model_v4 deleted 0.9928 262 400
AF-A0A0C1E3A8-F1-model_v4 Beta-ketoadipyl CoA thiolase 0.9915 252 400 GO:0016747
AF-A0A0C1E3A8-F1-model_v4 Beta-ketoadipyl CoA thiolase 0.985 252 400 GO:0016747

Map