F401985

General Info

Members Datasets Scaffolds Average Seq Length
313 215 626 339

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10042810|rootH1_100428102
Length 371
Sequence VLLLSLPLLLLLPRSTTPLRSIRALLWAGTSVAALSFVPAAPAQAGEGGTTAPARDVRSWLLRIHEAAGHRNFQGTFVVSGGGAVSSARIAHYCEGKNQFERSESLDGQPRRVFRYNDVVHTVWPAARLAVIEQRDLLSSFPALLQAGDDRIGEFYEVRSLAPDRVAGHDANVLQVRPKDGYRYGYRLWADQASGLLLRADVIGERGDVLETSAFSEVSIDVKPQPESVLLPMKKLEKLDGYRIVRPALSPTSLEAEGWTLRVGVPGFRQVSCVKRPIGGASPDDREPSAPAAQEYVSTPVLQTIFSDGLTYVSVFIEPFDSQRHTRPMLTAVGPTQTLMQQQGDWWVTVIGDVPPSTLRQFAKGLERKGK

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
58 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
59 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
60 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
61 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
62 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
63 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
64 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
65 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
67 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
68 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
71 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
90 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
91 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
130 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
131 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
137 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
138 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
139 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
140 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
141 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
142 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
143 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
144 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
145 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
146 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
147 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
148 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
149 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
150 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
151 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
152 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
153 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
154 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
155 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
156 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
157 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
158 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
159 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
160 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
161 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
162 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
163 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
164 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
165 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
166 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
167 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
168 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
169 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
172 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
173 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
174 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
175 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
178 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
179 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
180 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
181 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
182 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
183 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
184 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
187 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
188 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
189 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
190 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
191 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
192 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
193 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
194 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
195 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
196 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
197 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
198 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
199 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
200 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
201 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
202 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
203 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
204 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
205 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
206 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
207 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
208 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
209 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
210 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
211 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
212 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
213 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
214 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
215 2643221660 Methylibium sp. Root1272 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.44
Metatranscriptomes 0
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.52
Nodule 0.64
Rhizoplane 4.15
Rhizosphere 64.22
Stem 0
Stem Tuber 0
Unclassified 4.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10042810 3300003316 Bacteria 1749
2 JGI24740J21852_10001591 3300001979 Bacteria 10429
3 JGI25152J39213_1000786 3300002773 Bacteria 15921
4 JGI25150J39212_1013823 3300002774 Bacteria 1387
5 JGI25153J46596_10005964 3300003215 Bacteria 6273
6 JGI25153J46596_10008797 3300003215 Bacteria 4776
7 rootH1_10045575 3300003316 Bacteria 3387
8 rootH2_10238132 3300003320 Bacteria 1369
9 Ga0055526_1003580 3300003771 Bacteria 9769
10 Ga0055524_1000121 3300003775 Bacteria 91150
11 Ga0055530_10000515 3300003791 Bacteria 33601
12 Ga0055540_1000001 3300003792 Bacteria 466834
13 Ga0055531_10004913 3300003794 Bacteria 7952
14 Ga0065165_1003715 3300005262 Bacteria 10318
15 Ga0065707_10145563 3300005295 Bacteria 1718
16 Ga0070658_10108017 3300005327 Bacteria 2303
17 Ga0070676_10135064 3300005328 Bacteria 1564
18 Ga0070677_10076753 3300005333 Bacteria 1419
19 Ga0070666_10210308 3300005335 Unclassified 1370
20 Ga0070680_100008419 3300005336 Bacteria 7900
21 Ga0068868_100010482 3300005338 Bacteria 6715
22 Ga0070660_100023995 3300005339 Bacteria 4523
23 Ga0070660_100029875 3300005339 Bacteria 4086
24 Ga0070661_100019859 3300005344 Bacteria 4788
25 Ga0070661_100048366 3300005344 Bacteria 3113
26 Ga0070669_100013287 3300005353 Bacteria 5851
27 Ga0070675_100022460 3300005354 Bacteria 5042
28 Ga0070671_100250775 3300005355 Unclassified 1504
29 Ga0070674_100022271 3300005356 Bacteria 4084
30 Ga0070674_100276007 3300005356 Bacteria 1330
31 Ga0070659_100003701 3300005366 Bacteria 10907
32 Ga0070659_100018068 3300005366 Bacteria 5318
33 Ga0070659_100034576 3300005366 Bacteria 3931
34 Ga0070667_100219319 3300005367 Bacteria 1693
35 Ga0070700_100009304 3300005441 Bacteria 5386
36 Ga0070678_100051152 3300005456 Bacteria 2993
37 Ga0070662_100026489 3300005457 Bacteria 4016
38 Ga0070681_10053501 3300005458 Bacteria 4023
39 Ga0068867_100000860 3300005459 Bacteria 20460
40 Ga0068867_100056950 3300005459 Bacteria 2893
41 Ga0070706_100002337 3300005467 Bacteria 19150
42 Ga0070707_100067662 3300005468 Bacteria 3436
43 Ga0070698_100128919 3300005471 Bacteria 2486
44 Ga0070684_100183560 3300005535 Bacteria 1902
45 Ga0068853_100035247 3300005539 Bacteria 4249
46 Ga0068853_100054856 3300005539 Bacteria 3434
47 Ga0068853_100152819 3300005539 Bacteria 2078
48 Ga0068853_100345639 3300005539 Bacteria 1383
49 Ga0070686_100081362 3300005544 Bacteria 2145
50 Ga0070695_100060235 3300005545 Bacteria 2460
51 Ga0070693_100006191 3300005547 Bacteria 5799
52 Ga0070693_100195443 3300005547 Bacteria 1311
53 Ga0070665_100311893 3300005548 Bacteria 1577
54 Ga0068855_100048663 3300005563 Bacteria 5003
55 Ga0068855_100210773 3300005563 Bacteria 2183
56 Ga0070664_100014249 3300005564 Bacteria 6485
57 Ga0070664_100026754 3300005564 Bacteria 4789
58 Ga0070664_100052147 3300005564 Bacteria 3464
59 Ga0068854_100026398 3300005578 Bacteria 3992
60 Ga0068856_100065927 3300005614 Bacteria 3578
61 Ga0068856_100217349 3300005614 Bacteria 1926
62 Ga0070702_100010254 3300005615 Bacteria 4610
63 Ga0068852_100052327 3300005616 Bacteria 3509
64 Ga0068852_100195921 3300005616 Bacteria 1909
65 Ga0068852_100324432 3300005616 Unclassified 1496
66 Ga0068859_100070858 3300005617 Bacteria 3521
67 Ga0068859_100274639 3300005617 Bacteria 1778
68 Ga0068864_100009307 3300005618 Bacteria 8102
69 Ga0068866_10003468 3300005718 Bacteria 6455
70 Ga0068861_100003266 3300005719 Bacteria 10724
71 Ga0068861_100005959 3300005719 Bacteria 8279
72 Ga0068861_100158416 3300005719 Bacteria 1865
73 Ga0068851_10014133 3300005834 Bacteria 3786
74 Ga0068863_100117680 3300005841 Bacteria 2532
75 Ga0068863_100243238 3300005841 Bacteria 1737
76 Ga0068858_100029993 3300005842 Bacteria 5050
77 Ga0068858_100070480 3300005842 Bacteria 3240
78 Ga0068860_100037343 3300005843 Bacteria 4650
79 Ga0068860_100046096 3300005843 Bacteria 4157
80 Ga0068860_100140723 3300005843 Bacteria 2319
81 Ga0068860_100299114 3300005843 Bacteria 1576
82 Ga0068862_100010145 3300005844 Bacteria 7773
83 Ga0068862_100032593 3300005844 Bacteria 4402
84 Ga0068862_100199664 3300005844 Bacteria 1803
85 Ga0075365_10011660 3300006038 Bacteria 5179
86 Ga0075365_10095435 3300006038 Bacteria 2031
87 Ga0075368_10031057 3300006042 Bacteria 2070
88 Ga0075363_100011376 3300006048 Bacteria 4258
89 Ga0075363_100015005 3300006048 Bacteria 3799
90 Ga0075364_10056581 3300006051 Bacteria 2568
91 Ga0075362_10011022 3300006177 Bacteria 3550
92 Ga0075362_10070189 3300006177 Bacteria 1599
93 Ga0075367_10045937 3300006178 Bacteria 2564
94 Ga0075367_10057111 3300006178 Bacteria 2320
95 Ga0075369_10038185 3300006186 Bacteria 2048
96 Ga0075366_10004646 3300006195 Bacteria 7378
97 Ga0075366_10011697 3300006195 Bacteria 4959
98 Ga0075366_10011871 3300006195 Bacteria 4929
99 Ga0075366_10013042 3300006195 Bacteria 4726
100 Ga0075366_10016157 3300006195 Bacteria 4286
101 Ga0075366_10025283 3300006195 Bacteria 3467
102 Ga0075366_10116688 3300006195 Bacteria 1607
103 Ga0075366_10121236 3300006195 Bacteria 1576
104 Ga0075366_10178638 3300006195 Unclassified 1289
105 Ga0097621_100196268 3300006237 Bacteria 1750
106 Ga0075370_10006659 3300006353 Bacteria 5827
107 Ga0075370_10013458 3300006353 Bacteria 4349
108 Ga0075370_10028094 3300006353 Bacteria 3125
109 Ga0075370_10030570 3300006353 Bacteria 3005
110 Ga0068871_100011880 3300006358 Bacteria 6406
111 Ga0068865_100007223 3300006881 Bacteria 6824
112 Ga0097620_100070857 3300006931 Bacteria 3521
113 Ga0097620_100274639 3300006931 Bacteria 1778
114 Ga0079104_1000001 3300006946 Bacteria 521847
115 Ga0105240_10184580 3300009093 Bacteria 2458
116 Ga0105240_10324697 3300009093 Unclassified 1753
117 Ga0114129_10257904 3300009147 Bacteria 2338
118 Ga0105243_10213197 3300009148 Bacteria 1702
119 Ga0105241_10098490 3300009174 Bacteria 2320
120 Ga0105237_10001228 3300009545 Bacteria 34145
121 Ga0105238_10007843 3300009551 Bacteria 10675
122 Ga0105238_10055748 3300009551 Bacteria 3966
123 Ga0105238_10061953 3300009551 Bacteria 3742
124 Ga0105249_10086726 3300009553 Bacteria 2919
125 Ga0105239_10000942 3300010375 Bacteria 41042
126 Ga0157373_10042265 3300013100 Bacteria 3257
127 Ga0157369_10104962 3300013105 Bacteria 3008
128 Ga0163162_10009022 3300013306 Bacteria 9694
129 Ga0163162_10114074 3300013306 Bacteria 2801
130 Ga0157372_10093280 3300013307 Bacteria 3426
131 Ga0157375_10065289 3300013308 Bacteria 3628
132 Ga0157380_10037532 3300014326 Bacteria 3754
133 Ga0157377_10001941 3300014745 Bacteria 9047
134 Ga0157379_10013752 3300014968 Bacteria 7094
135 Ga0157379_10017500 3300014968 Bacteria 6310
136 Ga0157379_10073702 3300014968 Bacteria 3056
137 Ga0157379_10076522 3300014968 Bacteria 2997
138 Ga0157379_10161657 3300014968 Bacteria 2021
139 Ga0157376_10015559 3300014969 Bacteria 5751
140 Ga0163161_10014761 3300017792 Bacteria 5441
141 Ga0163161_10021977 3300017792 Bacteria 4487
142 Ga0207425_1001013 3300025245 Bacteria 13165
143 Ga0209129_1000062 3300025258 Bacteria 240655
144 Ga0209673_1006999 3300025273 Bacteria 5310
145 Ga0209673_1009981 3300025273 Bacteria 4048
146 Ga0209564_1000176 3300025295 Bacteria 152363
147 Ga0209758_1000129 3300025297 Bacteria 185022
148 Ga0209758_1000327 3300025297 Bacteria 89663
149 Ga0209050_1000118 3300025298 Bacteria 202586
150 Ga0209050_1000934 3300025298 Bacteria 38215
151 Ga0209256_1000015 3300025299 Bacteria 622953
152 Ga0209256_1011653 3300025299 Bacteria 3483
153 Ga0209051_1000018 3300025303 Bacteria 527061
154 Ga0209051_1001250 3300025303 Bacteria 22747
155 Ga0209051_1046049 3300025303 Bacteria 1504
156 Ga0209257_1000084 3300025304 Bacteria 291502
157 Ga0209257_1032040 3300025304 Bacteria 1672
158 Ga0207656_10005115 3300025321 Bacteria 4612
159 Ga0207642_10108390 3300025899 Bacteria 1409
160 Ga0207680_10034502 3300025903 Bacteria 2896
161 Ga0207645_10017939 3300025907 Bacteria 4667
162 Ga0207684_10018587 3300025910 Bacteria 5951
163 Ga0207695_10133396 3300025913 Bacteria 2439
164 Ga0207671_10003332 3300025914 Bacteria 16139
165 Ga0207660_10008905 3300025917 Bacteria 6490
166 Ga0207657_10044390 3300025919 Bacteria 3907
167 Ga0207649_10000359 3300025920 Bacteria 34180
168 Ga0207649_10085455 3300025920 Bacteria 2053
169 Ga0207652_10008692 3300025921 Bacteria 8178
170 Ga0207681_10017416 3300025923 Bacteria 4511
171 Ga0207694_10012410 3300025924 Bacteria 6421
172 Ga0207694_10019273 3300025924 Bacteria 5158
173 Ga0207659_10012462 3300025926 Bacteria 5412
174 Ga0207687_10018744 3300025927 Bacteria 4574
175 Ga0207690_10002829 3300025932 Bacteria 10469
176 Ga0207706_10006738 3300025933 Bacteria 10621
177 Ga0207669_10043376 3300025937 Bacteria 2634
178 Ga0207704_10045496 3300025938 Bacteria 2608
179 Ga0207691_10044923 3300025940 Bacteria 4064
180 Ga0207689_10021544 3300025942 Bacteria 5419
181 Ga0207679_10000047 3300025945 Bacteria 119891
182 Ga0207679_10011260 3300025945 Bacteria 5782
183 Ga0207679_10016624 3300025945 Bacteria 4888
184 Ga0207667_10036096 3300025949 Bacteria 5301
185 Ga0207640_10015613 3300025981 Bacteria 4401
186 Ga0207703_10049768 3300026035 Bacteria 3388
187 Ga0207639_10011871 3300026041 Bacteria 6059
188 Ga0207639_10015227 3300026041 Bacteria 5419
189 Ga0207639_10042561 3300026041 Bacteria 3404
190 Ga0207639_10315758 3300026041 Bacteria 1386
191 Ga0207678_10107449 3300026067 Bacteria 2380
192 Ga0207702_10035001 3300026078 Bacteria 4200
193 Ga0207648_10000823 3300026089 Bacteria 35061
194 Ga0207648_10043090 3300026089 Bacteria 3963
195 Ga0207648_10143165 3300026089 Bacteria 2108
196 Ga0207675_100002092 3300026118 Bacteria 19820
197 Ga0207675_100007218 3300026118 Bacteria 10496
198 Ga0207698_10004559 3300026142 Bacteria 8457
199 Ga0207698_10019599 3300026142 Bacteria 4635
200 Ga0207698_10051144 3300026142 Bacteria 3157
201 Ga0207698_10171106 3300026142 Bacteria 1913
202 Ga0209281_1000151 3300027111 Bacteria 167268
203 Ga0209813_10002768 3300027866 Bacteria 4047
204 Ga0268265_10006067 3300028380 Bacteria 8208
205 Ga0268265_10036611 3300028380 Bacteria 3595
206 Ga0268264_10003786 3300028381 Bacteria 12976
207 Ga0268264_10079909 3300028381 Bacteria 2791
208 Ga0307515_10000080 3300028794 Bacteria 224941
209 Ga0307515_10000180 3300028794 Bacteria 156173
210 Ga0307515_10250020 3300028794 Bacteria 1527
211 Ga0307513_10002929 3300031456 Bacteria 23340
212 Ga0307408_100127593 3300031548 Bacteria 1980
213 Ga0307408_100411231 3300031548 Bacteria 1164
214 Ga0307410_10089550 3300031852 Bacteria 2181
215 Ga0307406_10005377 3300031901 Bacteria 7011
216 Ga0307406_10054019 3300031901 Bacteria 2562
217 Ga0307411_10116146 3300032005 Bacteria 1926
218 Ga0373932_0011339 3300035112 Bacteria 2176
219 Ga0373961_0038314 3300035241 Unclassified 1373
220 Ga0373931_0004848 3300035691 Bacteria 6179
221 Ga0373931_0007613 3300035691 Bacteria 5104
222 Ga0373927_0011927 3300035695 Bacteria 5785
223 Ga0373925_0018954 3300037068 Bacteria 5002
224 Ga0439465_0084775 3300041413 Bacteria 1078
225 Ga0451795_1440615 3300041456 Bacteria 1447
226 Ga0451798_0750169 3300041458 Bacteria 1080
227 Ga0450898_012809 3300042134 Unclassified 1390
228 Ga0450899_004355 3300042135 Unclassified 1518
229 Ga0439446_0035588 3300042156 Bacteria 1453
230 Ga0439458_0026747 3300042157 Bacteria 1358
231 Ga0439434_0015686 3300042435 Bacteria 2260
232 Ga0450918_000006 3300042531 Bacteria 48279
233 Ga0451577_0020386 3300042876 Bacteria 6085
234 Ga0451577_0107578 3300042876 Bacteria 2493
235 Ga0466969_0003164 3300044656 Bacteria 8767
236 Ga0466965_0029296 3300044683 Bacteria 2678
237 Ga0466966_0026860 3300044684 Bacteria 3755
238 Ga0466963_0123852 3300044694 Unclassified 1781
239 Ga0466964_0014077 3300044706 Bacteria 3039
240 Ga0453684_0001363 3300044712 Bacteria 71046
241 Ga0453684_0119801 3300044712 Bacteria 3180
242 Ga0466971_0001884 3300044719 Bacteria 8908
243 Ga0466970_0014836 3300044765 Bacteria 4004
244 Ga0466957_0017143 3300044842 Bacteria 4239
245 Ga0466959_0001023 3300045049 Bacteria 16675
246 Ga0451576_0007448 3300045051 Bacteria 13076
247 Ga0451576_0284890 3300045051 Bacteria 1727
248 Ga0495650_0001962 3300046471 Bacteria 18166
249 Ga0495606_0209250 3300046507 Unclassified 1106
250 Ga0495632_0016816 3300046519 Bacteria 4056
251 Ga0495632_0053485 3300046519 Bacteria 1982
252 Ga0495586_0120446 3300046535 Bacteria 1466
253 Ga0495625_0013855 3300046660 Bacteria 6457
254 Ga0495649_0003335 3300046694 Bacteria 10897
255 Ga0495660_0004988 3300046810 Bacteria 7986
256 Ga0495687_002550 3300047443 Bacteria 14412
257 Ga0495686_0002445 3300047472 Bacteria 17540
258 Ga0495626_0112864 3300048091 Bacteria 1175
259 Ga0496101_0006091 3300048904 Bacteria 7746
260 Ga0496102_0010598 3300048905 Bacteria 7941
261 Ga0496102_0020228 3300048905 Bacteria 5880
262 Ga0496103_0056331 3300048906 Bacteria 2440
263 Ga0496104_0018696 3300048907 Bacteria 6326
264 Ga0496107_0006693 3300048910 Bacteria 7935
265 Ga0496108_0014485 3300048911 Bacteria 6438
266 Ga0496109_0102853 3300048912 Bacteria 2651
267 Ga0496111_0015156 3300048914 Bacteria 5284
268 Ga0496114_0014623 3300048917 Bacteria 6305
269 Ga0496114_0032050 3300048917 Bacteria 4324
270 Ga0496121_0013956 3300048924 Bacteria 8583
271 Ga0496124_0000596 3300048927 Bacteria 60853
272 Ga0495678_063452 3300049459 Bacteria 1380
273 nmdc:mga03683_94055_c1 3300050489 Bacteria 1310
274 nmdc:mga03n38_47133_c1 3300050490 Bacteria 1906
275 nmdc:mga00v17_50097_c1 3300050491 Bacteria 2536
276 nmdc:mga0yw44_60014_c1 3300050492 Bacteria 2329
277 nmdc:mga0k408_1196_c1 3300050493 Bacteria 14189
278 nmdc:mga0k408_14471_c1 3300050493 Bacteria 4349
279 nmdc:mga0k408_204017_c1 3300050493 Bacteria 1180
280 nmdc:mga0k408_33590_c1 3300050493 Bacteria 2934
281 nmdc:mga0k408_33753_c1 3300050493 Bacteria 2928
282 nmdc:mga0k408_64703_c1 3300050493 Bacteria 2128
283 nmdc:mga0k408_87571_c1 3300050493 Bacteria 1829
284 nmdc:mga0k408_935_c1 3300050493 Bacteria 15996
285 nmdc:mga06z11_4754_c1 3300050494 Bacteria 5372
286 nmdc:mga06z11_8325_c1 3300050494 Bacteria 4319
287 nmdc:mga07m45_123772_c1 3300050496 Unclassified 1494
288 nmdc:mga07m45_355_c1 3300050496 Bacteria 18707
289 nmdc:mga07m45_6311_c1 3300050496 Bacteria 5988
290 Ga0500578_0000079 3300053086 Bacteria 107137
291 Ga0500646_0020144 3300053090 Bacteria 1770
292 Ga0500651_0196371 3300053093 Unclassified 1192
293 Ga0500628_005913 3300053129 Bacteria 2056
294 Ga0500642_0011382 3300053130 Bacteria 3180
295 Ga0500652_000375 3300053131 Bacteria 16073
296 Ga0500658_0009261 3300053134 Bacteria 3632
297 Ga0500568_0007996 3300053139 Bacteria 5135
298 Ga0500590_004096 3300053148 Bacteria 6830
299 Ga0500604_0002883 3300053151 Bacteria 4659
300 Ga0500604_0028861 3300053151 Bacteria 1613
301 Ga0500622_0000053 3300053156 Bacteria 145070
302 Ga0500622_0019154 3300053156 Bacteria 3635
303 Ga0500570_081583 3300053724 Bacteria 1454
304 Ga0500584_074875 3300053726 Unclassified 1467
305 Ga0466962_0053851 3300061719 Bacteria 1922
306 2587728113 2585428057 Bacteria 6737412
307 2587731175 2585428058 Bacteria 6853932
308 2588289926 2588253510 Bacteria 6901809
309 2643972283 2643221592 Bacteria 6608788
310 2644141606 2643221625 Bacteria 6512927
311 2644246524 2643221644 Bacteria 6865017
312 2644275623 2643221648 Bacteria 6521465
313 2644341007 2643221660 Bacteria 4208257
314 rootH1_10042810
315 JGI24740J21852_10001591
316 JGI25152J39213_1000786
317 JGI25150J39212_1013823
318 JGI25153J46596_10005964
319 JGI25153J46596_10008797
320 rootH1_10045575
321 rootH2_10238132
322 Ga0055526_1003580
323 Ga0055524_1000121
324 Ga0055530_10000515
325 Ga0055540_1000001
326 Ga0055531_10004913
327 Ga0065165_1003715
328 Ga0065707_10145563
329 Ga0070658_10108017
330 Ga0070676_10135064
331 Ga0070677_10076753
332 Ga0070666_10210308
333 Ga0070680_100008419
334 Ga0068868_100010482
335 Ga0070660_100023995
336 Ga0070660_100029875
337 Ga0070661_100019859
338 Ga0070661_100048366
339 Ga0070669_100013287
340 Ga0070675_100022460
341 Ga0070671_100250775
342 Ga0070674_100022271
343 Ga0070674_100276007
344 Ga0070659_100003701
345 Ga0070659_100018068
346 Ga0070659_100034576
347 Ga0070667_100219319
348 Ga0070700_100009304
349 Ga0070678_100051152
350 Ga0070662_100026489
351 Ga0070681_10053501
352 Ga0068867_100000860
353 Ga0068867_100056950
354 Ga0070706_100002337
355 Ga0070707_100067662
356 Ga0070698_100128919
357 Ga0070684_100183560
358 Ga0068853_100035247
359 Ga0068853_100054856
360 Ga0068853_100152819
361 Ga0068853_100345639
362 Ga0070686_100081362
363 Ga0070695_100060235
364 Ga0070693_100006191
365 Ga0070693_100195443
366 Ga0070665_100311893
367 Ga0068855_100048663
368 Ga0068855_100210773
369 Ga0070664_100014249
370 Ga0070664_100026754
371 Ga0070664_100052147
372 Ga0068854_100026398
373 Ga0068856_100065927
374 Ga0068856_100217349
375 Ga0070702_100010254
376 Ga0068852_100052327
377 Ga0068852_100195921
378 Ga0068852_100324432
379 Ga0068859_100070858
380 Ga0068859_100274639
381 Ga0068864_100009307
382 Ga0068866_10003468
383 Ga0068861_100003266
384 Ga0068861_100005959
385 Ga0068861_100158416
386 Ga0068851_10014133
387 Ga0068863_100117680
388 Ga0068863_100243238
389 Ga0068858_100029993
390 Ga0068858_100070480
391 Ga0068860_100037343
392 Ga0068860_100046096
393 Ga0068860_100140723
394 Ga0068860_100299114
395 Ga0068862_100010145
396 Ga0068862_100032593
397 Ga0068862_100199664
398 Ga0075365_10011660
399 Ga0075365_10095435
400 Ga0075368_10031057
401 Ga0075363_100011376
402 Ga0075363_100015005
403 Ga0075364_10056581
404 Ga0075362_10011022
405 Ga0075362_10070189
406 Ga0075367_10045937
407 Ga0075367_10057111
408 Ga0075369_10038185
409 Ga0075366_10004646
410 Ga0075366_10011697
411 Ga0075366_10011871
412 Ga0075366_10013042
413 Ga0075366_10016157
414 Ga0075366_10025283
415 Ga0075366_10116688
416 Ga0075366_10121236
417 Ga0075366_10178638
418 Ga0097621_100196268
419 Ga0075370_10006659
420 Ga0075370_10013458
421 Ga0075370_10028094
422 Ga0075370_10030570
423 Ga0068871_100011880
424 Ga0068865_100007223
425 Ga0097620_100070857
426 Ga0097620_100274639
427 Ga0079104_1000001
428 Ga0105240_10184580
429 Ga0105240_10324697
430 Ga0114129_10257904
431 Ga0105243_10213197
432 Ga0105241_10098490
433 Ga0105237_10001228
434 Ga0105238_10007843
435 Ga0105238_10055748
436 Ga0105238_10061953
437 Ga0105249_10086726
438 Ga0105239_10000942
439 Ga0157373_10042265
440 Ga0157369_10104962
441 Ga0163162_10009022
442 Ga0163162_10114074
443 Ga0157372_10093280
444 Ga0157375_10065289
445 Ga0157380_10037532
446 Ga0157377_10001941
447 Ga0157379_10013752
448 Ga0157379_10017500
449 Ga0157379_10073702
450 Ga0157379_10076522
451 Ga0157379_10161657
452 Ga0157376_10015559
453 Ga0163161_10014761
454 Ga0163161_10021977
455 Ga0207425_1001013
456 Ga0209129_1000062
457 Ga0209673_1006999
458 Ga0209673_1009981
459 Ga0209564_1000176
460 Ga0209758_1000129
461 Ga0209758_1000327
462 Ga0209050_1000118
463 Ga0209050_1000934
464 Ga0209256_1000015
465 Ga0209256_1011653
466 Ga0209051_1000018
467 Ga0209051_1001250
468 Ga0209051_1046049
469 Ga0209257_1000084
470 Ga0209257_1032040
471 Ga0207656_10005115
472 Ga0207642_10108390
473 Ga0207680_10034502
474 Ga0207645_10017939
475 Ga0207684_10018587
476 Ga0207695_10133396
477 Ga0207671_10003332
478 Ga0207660_10008905
479 Ga0207657_10044390
480 Ga0207649_10000359
481 Ga0207649_10085455
482 Ga0207652_10008692
483 Ga0207681_10017416
484 Ga0207694_10012410
485 Ga0207694_10019273
486 Ga0207659_10012462
487 Ga0207687_10018744
488 Ga0207690_10002829
489 Ga0207706_10006738
490 Ga0207669_10043376
491 Ga0207704_10045496
492 Ga0207691_10044923
493 Ga0207689_10021544
494 Ga0207679_10000047
495 Ga0207679_10011260
496 Ga0207679_10016624
497 Ga0207667_10036096
498 Ga0207640_10015613
499 Ga0207703_10049768
500 Ga0207639_10011871
501 Ga0207639_10015227
502 Ga0207639_10042561
503 Ga0207639_10315758
504 Ga0207678_10107449
505 Ga0207702_10035001
506 Ga0207648_10000823
507 Ga0207648_10043090
508 Ga0207648_10143165
509 Ga0207675_100002092
510 Ga0207675_100007218
511 Ga0207698_10004559
512 Ga0207698_10019599
513 Ga0207698_10051144
514 Ga0207698_10171106
515 Ga0209281_1000151
516 Ga0209813_10002768
517 Ga0268265_10006067
518 Ga0268265_10036611
519 Ga0268264_10003786
520 Ga0268264_10079909
521 Ga0307515_10000080
522 Ga0307515_10000180
523 Ga0307515_10250020
524 Ga0307513_10002929
525 Ga0307408_100127593
526 Ga0307408_100411231
527 Ga0307410_10089550
528 Ga0307406_10005377
529 Ga0307406_10054019
530 Ga0307411_10116146
531 Ga0373932_0011339
532 Ga0373961_0038314
533 Ga0373931_0004848
534 Ga0373931_0007613
535 Ga0373927_0011927
536 Ga0373925_0018954
537 Ga0439465_0084775
538 Ga0451795_1440615
539 Ga0451798_0750169
540 Ga0450898_012809
541 Ga0450899_004355
542 Ga0439446_0035588
543 Ga0439458_0026747
544 Ga0439434_0015686
545 Ga0450918_000006
546 Ga0451577_0020386
547 Ga0451577_0107578
548 Ga0466969_0003164
549 Ga0466965_0029296
550 Ga0466966_0026860
551 Ga0466963_0123852
552 Ga0466964_0014077
553 Ga0453684_0001363
554 Ga0453684_0119801
555 Ga0466971_0001884
556 Ga0466970_0014836
557 Ga0466957_0017143
558 Ga0466959_0001023
559 Ga0451576_0007448
560 Ga0451576_0284890
561 Ga0495650_0001962
562 Ga0495606_0209250
563 Ga0495632_0016816
564 Ga0495632_0053485
565 Ga0495586_0120446
566 Ga0495625_0013855
567 Ga0495649_0003335
568 Ga0495660_0004988
569 Ga0495687_002550
570 Ga0495686_0002445
571 Ga0495626_0112864
572 Ga0496101_0006091
573 Ga0496102_0010598
574 Ga0496102_0020228
575 Ga0496103_0056331
576 Ga0496104_0018696
577 Ga0496107_0006693
578 Ga0496108_0014485
579 Ga0496109_0102853
580 Ga0496111_0015156
581 Ga0496114_0014623
582 Ga0496114_0032050
583 Ga0496121_0013956
584 Ga0496124_0000596
585 Ga0495678_063452
586 nmdc:mga03683_94055_c1
587 nmdc:mga03n38_47133_c1
588 nmdc:mga00v17_50097_c1
589 nmdc:mga0yw44_60014_c1
590 nmdc:mga0k408_1196_c1
591 nmdc:mga0k408_14471_c1
592 nmdc:mga0k408_204017_c1
593 nmdc:mga0k408_33590_c1
594 nmdc:mga0k408_33753_c1
595 nmdc:mga0k408_64703_c1
596 nmdc:mga0k408_87571_c1
597 nmdc:mga0k408_935_c1
598 nmdc:mga06z11_4754_c1
599 nmdc:mga06z11_8325_c1
600 nmdc:mga07m45_123772_c1
601 nmdc:mga07m45_355_c1
602 nmdc:mga07m45_6311_c1
603 Ga0500578_0000079
604 Ga0500646_0020144
605 Ga0500651_0196371
606 Ga0500628_005913
607 Ga0500642_0011382
608 Ga0500652_000375
609 Ga0500658_0009261
610 Ga0500568_0007996
611 Ga0500590_004096
612 Ga0500604_0002883
613 Ga0500604_0028861
614 Ga0500622_0000053
615 Ga0500622_0019154
616 Ga0500570_081583
617 Ga0500584_074875
618 Ga0466962_0053851
619 2587728113
620 2587731175
621 2588289926
622 2643972283
623 2644141606
624 2644246524
625 2644275623
626 2644341007

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03888

MucB_RseB

MucB/RseB N-terminal domain

56

234

0.97

PF17188

MucB_RseB_C

MucB/RseB C-terminal domain

253

367

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ehp-assembly1.cif.gz_B the crystal structure of the human lamtor complex 0.8237 304 341
6in9-assembly1.cif.gz_A crystal structure of mucb in complex with muca(peri) 0.8167 47 347
6jau-assembly1.cif.gz_A the complex structure of pseudomonas aeruginosa muca/mucb. 0.8069 49 347
6in9-assembly1.cif.gz_A crystal structure of mucb in complex with muca(peri) 0.8055 47 347
3m4w-assembly1.cif.gz_C structural basis for the negative regulation of bacterial stress response by rseb 0.8022 48 345
ID Description Score Start End Superfamily
2p4bB02 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;MucB/RseB, C-terminal domain 0.9251 244 345 3.30.200.100
2p4bB02 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;MucB/RseB, C-terminal domain 0.8811 244 345 3.30.200.100
2v43A01 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.864 48 221 2.50.20.10
2p4bB01 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.8601 50 211 2.50.20.10
af_P34392_22_95_3.30.450.30 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;Dynein light chain 2a, cytoplasmic 0.8463 304 328 3.30.450.30
ID Description Score Start End GO Terms
AF-A0A847VFG3-F1-model_v4 Transcriptional regulator 0.97 255 347 GO:0030288
GO:0032885
GO:0045152
AF-A0A5C6TYS3-F1-model_v4 Transcriptional regulator 0.9669 68 347 GO:0030288
GO:0032885
GO:0045152
AF-A0A5C6TYS3-F1-model_v4 Transcriptional regulator 0.9569 68 347 GO:0030288
GO:0032885
GO:0045152
AF-A0A0Q8SMJ6-F1-model_v4 Transcriptional regulator 0.9531 54 347 GO:0030288
GO:0032885
GO:0045152
AF-A0A847VFG3-F1-model_v4 Transcriptional regulator 0.9488 255 347 GO:0030288
GO:0032885
GO:0045152

Map