F402000

General Info

Members Datasets Scaffolds Average Seq Length
313 208 626 318

Family's Representative Sequence

Representative Sequence 3300003781|Ga0055536_1035177|Ga0055536_10351772
Length 358
Sequence LIHDPIATICRATPCVAASLQRPAILEGHALQQSGPAGPDLHQMSTLFRSIEGGRLFPHGSVVCIGAFDGLHLGHRALVRHAVARARALGVPAVAVAFEPLPREYFAQGEPPPRLTLARDKVALLRDFGADAIGLLRFDARMAAMPAESFVEQLLAQRLGAREVWIGPEFCFGNRRRGDLGLLQAMGERLGFSAGEIEAVDLHGDRISATRIRQLLREGDFAHAADLLGRPYAIGGRVVRGRQLGRTLGFPTANLRFPKAPALAGIYATWVHGVFDQPWPSVSSFGTRPTVDGVEPLLEAHLFDFQGDLYGRHIEVEFVAKLRNEEKFHDLAALTDQMHRDADQARHILSEHRLRATA

Samples

Sample ID Description Type Environment
1 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
40 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
41 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
42 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
74 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
75 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
89 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
90 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
91 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
92 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
95 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
96 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
111 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
151 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
152 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
153 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
154 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
155 2643221559 Lysobacter sp. Root559 Isolate Unclassified
156 2643221573 Lysobacter sp. Root604 Isolate Unclassified
157 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
158 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
159 2643221586 Lysobacter sp. Root667 Isolate Unclassified
160 2643221593 Lysobacter sp. Root690 Isolate Unclassified
161 2643221612 Lysobacter sp. Root76 Isolate Unclassified
162 2643221720 Lysobacter sp. Root916 Isolate Unclassified
163 2643221727 Lysobacter sp. Root96 Isolate Unclassified
164 2643221728 Lysobacter sp. Root983 Isolate Unclassified
165 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
166 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
167 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
168 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
169 2818991457 Xanthomonas translucens 569 Isolate Unclassified
170 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
171 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
172 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
173 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
174 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
175 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
176 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
177 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
178 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
179 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
180 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
181 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
182 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
183 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
184 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
185 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
186 2919513703 Luteimonas sp. 3794 Isolate Unclassified
187 2919675420 Luteimonas terrae 4099 Isolate Unclassified
188 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
189 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
190 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
191 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
192 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
193 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
194 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
195 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
196 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
197 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
198 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
199 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
200 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
201 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
202 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
203 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
204 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
205 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
206 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
207 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
208 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.79
Metatranscriptomes 0
Isolates 18.21

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 20.13
Nodule 0.32
Rhizoplane 3.19
Rhizosphere 51.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1035177 3300003781 Bacteria 1256
2 SwRhRL2b_contig_2935707 2162886007 Bacteria 7699
3 SwRhRL2b_contig_3613000 2162886007 Bacteria 2308
4 JGI25152J39213_1000231 3300002773 Bacteria 37495
5 JGI25150J39212_1000095 3300002774 Bacteria 50881
6 JGI25151J46595_10000183 3300003187 Bacteria 78518
7 JGI25151J46595_10000477 3300003187 Bacteria 37879
8 JGI25153J46596_10000291 3300003215 Bacteria 37879
9 rootH2_10192204 3300003320 Bacteria 1946
10 rootL2_10259149 3300003322 Bacteria 3170
11 rootH1_10214631 3300003323 Bacteria 2840
12 Ga0055526_1000157 3300003771 Bacteria 60697
13 Ga0055526_1000464 3300003771 Bacteria 32229
14 Ga0055526_1005359 3300003771 Bacteria 7401
15 Ga0055537_1000169 3300003773 Bacteria 48599
16 Ga0055524_1010902 3300003775 Bacteria 3585
17 Ga0055524_1013079 3300003775 Bacteria 3151
18 Ga0055536_1004696 3300003781 Bacteria 6883
19 Ga0055536_1007409 3300003781 Bacteria 4917
20 Ga0055536_1035173 3300003781 Bacteria 1256
21 Ga0055534_1000404 3300003784 Bacteria 26598
22 Ga0055528_1000587 3300003790 Bacteria 27449
23 Ga0055530_10013191 3300003791 Bacteria 2832
24 Ga0055530_10013227 3300003791 Bacteria 2826
25 Ga0055531_10024899 3300003794 Bacteria 2192
26 Ga0055531_10031182 3300003794 Bacteria 1772
27 Ga0055531_10044012 3300003794 Bacteria 1256
28 Ga0055531_10044282 3300003794 Bacteria 1249
29 Ga0058692_1000017 3300003856 Bacteria 274459
30 Ga0058692_1000022 3300003856 Bacteria 237321
31 Ga0065704_10000275 3300005289 Bacteria 50973
32 Ga0065704_10072183 3300005289 Bacteria 8987
33 Ga0065704_10077686 3300005289 Bacteria 4648
34 Ga0070670_100017706 3300005331 Bacteria 6112
35 Ga0070669_100056506 3300005353 Bacteria 2877
36 Ga0070669_100105452 3300005353 Bacteria 2132
37 Ga0070669_100377205 3300005353 Bacteria 1156
38 Ga0070674_100030917 3300005356 Bacteria 3543
39 Ga0070667_100203596 3300005367 Bacteria 1757
40 Ga0070663_100040451 3300005455 Bacteria 3264
41 Ga0070698_100015822 3300005471 Bacteria 7967
42 Ga0070672_100017776 3300005543 Bacteria 5124
43 Ga0070665_100167758 3300005548 Bacteria 2197
44 Ga0081539_10034272 3300005985 Bacteria 3073
45 Ga0075364_10032977 3300006051 Bacteria 3332
46 Ga0075364_10080179 3300006051 Bacteria 2157
47 Ga0075364_10247505 3300006051 Bacteria 1211
48 Ga0075434_100163652 3300006871 Bacteria 2245
49 Ga0075434_100224544 3300006871 Bacteria 1898
50 Ga0105251_10001750 3300009011 Bacteria 18123
51 Ga0105251_10013427 3300009011 Bacteria 4582
52 Ga0105243_10016308 3300009148 Bacteria 5620
53 Ga0105243_10070032 3300009148 Bacteria 2831
54 Ga0105243_10098413 3300009148 Bacteria 2423
55 Ga0105028_102749 3300009993 Bacteria 1850
56 Ga0157373_10068698 3300013100 Bacteria 2505
57 Ga0157371_10054634 3300013102 Bacteria 2835
58 Ga0157371_10253440 3300013102 Bacteria 1268
59 Ga0157370_10022903 3300013104 Bacteria 6211
60 Ga0157370_10104423 3300013104 Bacteria 2652
61 Ga0157369_10044387 3300013105 Bacteria 4838
62 Ga0157372_10097618 3300013307 Bacteria 3351
63 Ga0182008_10000745 3300014497 Bacteria 22965
64 Ga0182008_10027170 3300014497 Bacteria 2901
65 Ga0182006_1015811 3300015261 Bacteria 3228
66 Ga0182006_1022070 3300015261 Bacteria 2650
67 Ga0182006_1083150 3300015261 Bacteria 1165
68 Ga0182007_10000311 3300015262 Bacteria 31137
69 Ga0182005_1000334 3300015265 Bacteria 27479
70 Ga0183360_10001 3300015689 Bacteria 3943671
71 Ga0163161_10028776 3300017792 Bacteria 3948
72 Ga0163161_10054925 3300017792 Bacteria 2891
73 Ga0163161_10257192 3300017792 Bacteria 1363
74 Ga0207425_1000028 3300025245 Bacteria 286333
75 Ga0209129_1000065 3300025258 Bacteria 232568
76 Ga0209565_1000031 3300025263 Bacteria 320341
77 Ga0209673_1000484 3300025273 Bacteria 66361
78 Ga0209673_1005025 3300025273 Bacteria 6830
79 Ga0209130_1006086 3300025284 Bacteria 3998
80 Ga0209675_1000015 3300025291 Bacteria 403517
81 Ga0209675_1012412 3300025291 Bacteria 2746
82 Ga0209676_1000024 3300025292 Bacteria 578839
83 Ga0209676_1000225 3300025292 Bacteria 124018
84 Ga0209676_1001462 3300025292 Bacteria 22110
85 Ga0209676_1002669 3300025292 Bacteria 12106
86 Ga0209676_1027026 3300025292 Bacteria 1811
87 Ga0209025_1000002 3300025294 Bacteria 1393142
88 Ga0209025_1000015 3300025294 Bacteria 808120
89 Ga0209025_1006757 3300025294 Bacteria 8797
90 Ga0209564_1000480 3300025295 Bacteria 66421
91 Ga0209564_1013608 3300025295 Bacteria 3437
92 Ga0209758_1000003 3300025297 Bacteria 1398533
93 Ga0209758_1007835 3300025297 Bacteria 7120
94 Ga0209050_1000201 3300025298 Bacteria 134028
95 Ga0209050_1001448 3300025298 Bacteria 25493
96 Ga0209050_1005904 3300025298 Bacteria 7477
97 Ga0209050_1038878 3300025298 Bacteria 1349
98 Ga0209256_1004284 3300025299 Bacteria 9085
99 Ga0209256_1008832 3300025299 Bacteria 4561
100 Ga0209256_1014438 3300025299 Bacteria 2842
101 Ga0209257_1000148 3300025304 Bacteria 193131
102 Ga0209257_1000180 3300025304 Bacteria 158090
103 Ga0209257_1000208 3300025304 Bacteria 141393
104 Ga0209257_1001906 3300025304 Bacteria 22534
105 Ga0209257_1002013 3300025304 Bacteria 21724
106 Ga0209257_1005324 3300025304 Bacteria 9122
107 Ga0209257_1017663 3300025304 Bacteria 2796
108 Ga0207713_1000393 3300025735 Bacteria 47322
109 Ga0207713_1009318 3300025735 Bacteria 5547
110 Ga0207681_10096836 3300025923 Bacteria 2119
111 Ga0207650_10198688 3300025925 Bacteria 1605
112 Ga0207644_10069051 3300025931 Bacteria 2579
113 Ga0207709_10000892 3300025935 Bacteria 22573
114 Ga0207709_10018008 3300025935 Bacteria 3951
115 Ga0207691_10015056 3300025940 Bacteria 7361
116 Ga0207711_10341234 3300025941 Bacteria 1386
117 Ga0207679_10305707 3300025945 Bacteria 1372
118 Ga0207668_10005407 3300025972 Bacteria 7522
119 Ga0207678_10139309 3300026067 Bacteria 2070
120 Ga0209371_1000004 3300027312 Bacteria 1098197
121 Ga0209371_1000044 3300027312 Bacteria 327086
122 Ga0209970_1001576 3300027614 Bacteria 3982
123 Ga0209983_1001058 3300027665 Bacteria 6064
124 Ga0209971_1014903 3300027682 Bacteria 1842
125 Ga0209974_10007122 3300027876 Bacteria 3865
126 Ga0268266_10605336 3300028379 Bacteria 1053
127 Ga0268256_1000005 3300030500 Bacteria 1082342
128 Ga0268256_1000046 3300030500 Bacteria 327003
129 Ga0316176_1035196 3300030732 Bacteria 4398
130 Ga0316183_1112192 3300030742 Bacteria 3952
131 Ga0307509_10068979 3300031507 Bacteria 3698
132 Ga0307408_100014857 3300031548 Bacteria 5178
133 Ga0307408_100164023 3300031548 Bacteria 1768
134 Ga0307410_10018701 3300031852 Bacteria 4193
135 Ga0307406_10002829 3300031901 Bacteria 9457
136 Ga0307406_10205863 3300031901 Bacteria 1452
137 Ga0307407_10151861 3300031903 Bacteria 1506
138 Ga0307412_10139632 3300031911 Bacteria 1772
139 Ga0307412_10418171 3300031911 Bacteria 1096
140 Ga0307409_100323705 3300031995 Bacteria 1444
141 Ga0307414_10002089 3300032004 Bacteria 10394
142 Ga0307414_10013706 3300032004 Bacteria 4835
143 Ga0307414_10037178 3300032004 Bacteria 3258
144 Ga0307414_10042369 3300032004 Bacteria 3092
145 Ga0307414_10145693 3300032004 Bacteria 1860
146 Ga0307411_10015781 3300032005 Bacteria 4255
147 Ga0307411_10272516 3300032005 Bacteria 1343
148 Ga0307507_10075371 3300033179 Bacteria 3018
149 Ga0395905_0000855 3300037471 Bacteria 39769
150 Ga0395905_0027025 3300037471 Bacteria 5411
151 Ga0395905_0229356 3300037471 Bacteria 1737
152 Ga0395905_0345552 3300037471 Bacteria 1379
153 Ga0395901_0013949 3300038443 Bacteria 8179
154 Ga0237819_00006 3300038705 Bacteria 78253
155 Ga0237816_00467 3300039145 Bacteria 3425
156 Ga0439436_0001797 3300041404 Bacteria 6318
157 Ga0439436_0014897 3300041404 Bacteria 2342
158 Ga0439447_001803 3300041407 Bacteria 7844
159 Ga0439465_0000538 3300041413 Bacteria 11374
160 Ga0439465_0013864 3300041413 Bacteria 2509
161 Ga0451793_0610660 3300041452 Bacteria 1344
162 Ga0451795_0694669 3300041456 Bacteria 1843
163 Ga0451807_0241764 3300041486 Bacteria 1384
164 Ga0451807_1155419 3300041486 Bacteria 2649
165 Ga0451837_0285352 3300041494 Bacteria 924
166 Ga0439445_0002429 3300042004 Bacteria 4146
167 Ga0439449_0000048 3300042007 Bacteria 36681
168 Ga0439449_0004578 3300042007 Bacteria 5346
169 Ga0439449_0033077 3300042007 Bacteria 1927
170 Ga0451577_0002087 3300042876 Bacteria 24590
171 Ga0453684_0087357 3300044712 Bacteria 3865
172 Ga0451576_0195970 3300045051 Bacteria 2110
173 Ga0495627_017777 3300046453 Bacteria 2409
174 Ga0495638_0005405 3300046460 Bacteria 9508
175 Ga0495638_0034979 3300046460 Bacteria 3204
176 Ga0495607_0008374 3300046501 Bacteria 7073
177 Ga0495606_0066697 3300046507 Bacteria 2281
178 Ga0495610_0002267 3300046512 Bacteria 16255
179 Ga0495610_0045590 3300046512 Bacteria 2168
180 Ga0495616_0104695 3300046513 Bacteria 1322
181 Ga0495631_0016790 3300046518 Bacteria 3479
182 Ga0495643_0001267 3300046522 Bacteria 24200
183 Ga0495663_0015448 3300046525 Bacteria 2151
184 Ga0495598_0113437 3300046537 Bacteria 911
185 Ga0495656_0007003 3300046615 Bacteria 3970
186 Ga0495671_0011600 3300046692 Bacteria 4842
187 Ga0495636_0020050 3300047318 Bacteria 2692
188 Ga0495672_0001346 3300047320 Bacteria 24356
189 Ga0495681_0043082 3300047470 Bacteria 2179
190 Ga0496100_0158895 3300048903 Bacteria 1619
191 Ga0496108_0269013 3300048911 Bacteria 1483
192 Ga0496112_0160521 3300048915 Bacteria 2214
193 Ga0496113_0263396 3300048916 Bacteria 1377
194 Ga0496114_0021142 3300048917 Bacteria 5291
195 Ga0496115_0330330 3300048918 Bacteria 1246
196 Ga0496116_0069288 3300048919 Bacteria 2243
197 Ga0496117_0001068 3300048920 Bacteria 41562
198 Ga0496117_0015502 3300048920 Bacteria 6491
199 Ga0496117_0028228 3300048920 Bacteria 4350
200 Ga0496118_0001160 3300048921 Bacteria 40619
201 Ga0496118_0065596 3300048921 Bacteria 2656
202 Ga0496118_0099251 3300048921 Bacteria 1974
203 Ga0496119_0000929 3300048922 Bacteria 37913
204 Ga0496119_0032188 3300048922 Bacteria 3499
205 Ga0496120_0000943 3300048923 Bacteria 39981
206 Ga0496120_0031146 3300048923 Bacteria 3234
207 Ga0496121_0006274 3300048924 Bacteria 14866
208 Ga0496121_0060545 3300048924 Bacteria 3113
209 Ga0496122_0009022 3300048925 Bacteria 10589
210 Ga0496122_0018188 3300048925 Bacteria 6508
211 Ga0496122_0020793 3300048925 Bacteria 5907
212 Ga0496122_0138673 3300048925 Bacteria 1526
213 Ga0496123_0007154 3300048926 Bacteria 10599
214 Ga0496123_0018023 3300048926 Bacteria 5648
215 Ga0496123_0031384 3300048926 Bacteria 3867
216 Ga0496123_0046424 3300048926 Bacteria 2946
217 Ga0496123_0148224 3300048926 Bacteria 1270
218 Ga0496124_0000032 3300048927 Bacteria 332524
219 Ga0496124_0001083 3300048927 Bacteria 42950
220 Ga0496124_0029845 3300048927 Bacteria 4850
221 Ga0496124_0118680 3300048927 Bacteria 2117
222 Ga0496124_0166385 3300048927 Bacteria 1713
223 Ga0496124_0331701 3300048927 Bacteria 1084
224 Ga0496125_0047814 3300048928 Bacteria 3573
225 Ga0496125_0068110 3300048928 Bacteria 2801
226 Ga0496125_0079356 3300048928 Bacteria 2518
227 Ga0496125_0088493 3300048928 Bacteria 2333
228 Ga0496125_0103387 3300048928 Bacteria 2090
229 Ga0496125_0215752 3300048928 Bacteria 1241
230 Ga0496126_0032196 3300048929 Bacteria 4942
231 Ga0496126_0037743 3300048929 Bacteria 4504
232 Ga0496126_0060614 3300048929 Bacteria 3402
233 Ga0501032_0035192 3300049569 Bacteria 3426
234 Ga0501032_0074239 3300049569 Bacteria 2266
235 Ga0501033_0004728 3300049570 Bacteria 10895
236 Ga0501033_0015922 3300049570 Bacteria 5696
237 Ga0501034_0010693 3300049571 Bacteria 9532
238 Ga0501034_0012346 3300049571 Bacteria 8826
239 Ga0501034_0051132 3300049571 Bacteria 4167
240 Ga0501036_0139804 3300049572 Bacteria 2044
241 Ga0501037_0053989 3300049573 Bacteria 2939
242 Ga0501038_0084824 3300049574 Bacteria 2665
243 Ga0501043_0001038 3300049579 Bacteria 24393
244 Ga0501043_0028401 3300049579 Bacteria 4391
245 Ga0501068_0282475 3300049584 Bacteria 1061
246 Ga0501069_0010337 3300049585 Bacteria 4938
247 Ga0501070_0033640 3300049586 Bacteria 4290
248 Ga0501071_0161787 3300049587 Bacteria 1673
249 Ga0501074_0004172 3300049590 Bacteria 10322
250 Ga0501225_0003316 3300049705 Bacteria 4907
251 Ga0501080_0030016 3300049742 Bacteria 5062
252 Ga0501265_001304 3300049762 Bacteria 2804
253 Ga0501035_0327277 3300049822 Bacteria 1286
254 nmdc:mga00v17_32937_c1 3300050491 Bacteria 3066
255 nmdc:mga00v17_38099_c1 3300050491 Bacteria 2874
256 Ga0500634_0000094 3300053161 Bacteria 34789
257 2547501359 2547132130 Bacteria 4660562
258 2572253467 2571042365 Bacteria 3289345
259 2578459163 2576861471 Bacteria 4648976
260 2643818961 2643221559 Bacteria 4424915
261 2643879482 2643221573 Bacteria 4784121
262 2643905725 2643221579 Bacteria 4443405
263 2643913142 2643221581 Bacteria 3893603
264 2643941368 2643221586 Bacteria 4446529
265 2643974362 2643221593 Bacteria 6296053
266 2644080387 2643221612 Bacteria 4361984
267 2644662906 2643221720 Bacteria 4694283
268 2644697000 2643221727 Bacteria 4415595
269 2644698139 2643221728 Bacteria 4797149
270 2747951029 2747842428 Bacteria 4689383
271 2748017172 2747842501 Bacteria 5293829
272 2765578154 2765235840 Bacteria 4663337
273 2816516216 2816332141 Bacteria 4436036
274 2819660349 2818991457 Bacteria 5323295
275 2842393597 2842391507 Bacteria 4486072
276 2842759370 2842757796 Bacteria 3981385
277 2842783581 2842780639 Bacteria 4337790
278 2848700052 2848694841 Bacteria 9205737
279 2852651523 2852649853 Bacteria 4036942
280 2852689117 2852684882 Bacteria 5463342
281 2857442988 2857442823 Bacteria 4562550
282 2874220809 2874220319 Bacteria 4594709
283 2894414682 2894414249 Bacteria 4405451
284 2895499176 2895498888 Bacteria 5283788
285 2895512198 2895511927 Bacteria 6802080
286 2895522209 2895522137 Bacteria 3284416
287 2895527348 2895525241 Bacteria 3388457
288 2919090839 2919089067 Bacteria 4560942
289 2919130381 2919130084 Bacteria 5301837
290 2919136971 2919134579 Bacteria 4480386
291 2919516513 2919513703 Bacteria 3844312
292 2919678603 2919675420 Bacteria 3969095
293 2923517825 2923516293 Bacteria 3716336
294 2928496823 2928496128 Bacteria 4631123
295 2929198614 2929195423 Bacteria 5325372
296 2931381569 2931380184 Bacteria 4455911
297 2937611640 2937610967 Bacteria 4618818
298 2939592220 2939589442 Bacteria 4214238
299 2939625075 2939622612 Bacteria 4698046
300 2939627574 2939626828 Bacteria 4695272
301 2941476951 2941475908 Bacteria 4145589
302 2941489569 2941489479 Bacteria 6313767
303 2961047574 2961047084 Bacteria 4594415
304 2961068404 2961064222 Bacteria 4749990
305 2974309603 2974307012 Bacteria 4172388
306 2977250350 2977247770 Bacteria 4160543
307 2984515184 2984514374 Bacteria 4172479
308 2987607539 2987605356 Bacteria 4187822
309 2995950894 2995948881 Bacteria 6358104
310 8002871695 8002869464 Bacteria 3588529
311 8021624851 8021622325 Bacteria 4844743
312 8021627832 8021626552 Bacteria 4665214
313 8021649629 8021648035 Bacteria 4772378
314 Ga0055536_1035177
315 SwRhRL2b_contig_2935707
316 SwRhRL2b_contig_3613000
317 JGI25152J39213_1000231
318 JGI25150J39212_1000095
319 JGI25151J46595_10000183
320 JGI25151J46595_10000477
321 JGI25153J46596_10000291
322 rootH2_10192204
323 rootL2_10259149
324 rootH1_10214631
325 Ga0055526_1000157
326 Ga0055526_1000464
327 Ga0055526_1005359
328 Ga0055537_1000169
329 Ga0055524_1010902
330 Ga0055524_1013079
331 Ga0055536_1004696
332 Ga0055536_1007409
333 Ga0055536_1035173
334 Ga0055534_1000404
335 Ga0055528_1000587
336 Ga0055530_10013191
337 Ga0055530_10013227
338 Ga0055531_10024899
339 Ga0055531_10031182
340 Ga0055531_10044012
341 Ga0055531_10044282
342 Ga0058692_1000017
343 Ga0058692_1000022
344 Ga0065704_10000275
345 Ga0065704_10072183
346 Ga0065704_10077686
347 Ga0070670_100017706
348 Ga0070669_100056506
349 Ga0070669_100105452
350 Ga0070669_100377205
351 Ga0070674_100030917
352 Ga0070667_100203596
353 Ga0070663_100040451
354 Ga0070698_100015822
355 Ga0070672_100017776
356 Ga0070665_100167758
357 Ga0081539_10034272
358 Ga0075364_10032977
359 Ga0075364_10080179
360 Ga0075364_10247505
361 Ga0075434_100163652
362 Ga0075434_100224544
363 Ga0105251_10001750
364 Ga0105251_10013427
365 Ga0105243_10016308
366 Ga0105243_10070032
367 Ga0105243_10098413
368 Ga0105028_102749
369 Ga0157373_10068698
370 Ga0157371_10054634
371 Ga0157371_10253440
372 Ga0157370_10022903
373 Ga0157370_10104423
374 Ga0157369_10044387
375 Ga0157372_10097618
376 Ga0182008_10000745
377 Ga0182008_10027170
378 Ga0182006_1015811
379 Ga0182006_1022070
380 Ga0182006_1083150
381 Ga0182007_10000311
382 Ga0182005_1000334
383 Ga0183360_10001
384 Ga0163161_10028776
385 Ga0163161_10054925
386 Ga0163161_10257192
387 Ga0207425_1000028
388 Ga0209129_1000065
389 Ga0209565_1000031
390 Ga0209673_1000484
391 Ga0209673_1005025
392 Ga0209130_1006086
393 Ga0209675_1000015
394 Ga0209675_1012412
395 Ga0209676_1000024
396 Ga0209676_1000225
397 Ga0209676_1001462
398 Ga0209676_1002669
399 Ga0209676_1027026
400 Ga0209025_1000002
401 Ga0209025_1000015
402 Ga0209025_1006757
403 Ga0209564_1000480
404 Ga0209564_1013608
405 Ga0209758_1000003
406 Ga0209758_1007835
407 Ga0209050_1000201
408 Ga0209050_1001448
409 Ga0209050_1005904
410 Ga0209050_1038878
411 Ga0209256_1004284
412 Ga0209256_1008832
413 Ga0209256_1014438
414 Ga0209257_1000148
415 Ga0209257_1000180
416 Ga0209257_1000208
417 Ga0209257_1001906
418 Ga0209257_1002013
419 Ga0209257_1005324
420 Ga0209257_1017663
421 Ga0207713_1000393
422 Ga0207713_1009318
423 Ga0207681_10096836
424 Ga0207650_10198688
425 Ga0207644_10069051
426 Ga0207709_10000892
427 Ga0207709_10018008
428 Ga0207691_10015056
429 Ga0207711_10341234
430 Ga0207679_10305707
431 Ga0207668_10005407
432 Ga0207678_10139309
433 Ga0209371_1000004
434 Ga0209371_1000044
435 Ga0209970_1001576
436 Ga0209983_1001058
437 Ga0209971_1014903
438 Ga0209974_10007122
439 Ga0268266_10605336
440 Ga0268256_1000005
441 Ga0268256_1000046
442 Ga0316176_1035196
443 Ga0316183_1112192
444 Ga0307509_10068979
445 Ga0307408_100014857
446 Ga0307408_100164023
447 Ga0307410_10018701
448 Ga0307406_10002829
449 Ga0307406_10205863
450 Ga0307407_10151861
451 Ga0307412_10139632
452 Ga0307412_10418171
453 Ga0307409_100323705
454 Ga0307414_10002089
455 Ga0307414_10013706
456 Ga0307414_10037178
457 Ga0307414_10042369
458 Ga0307414_10145693
459 Ga0307411_10015781
460 Ga0307411_10272516
461 Ga0307507_10075371
462 Ga0395905_0000855
463 Ga0395905_0027025
464 Ga0395905_0229356
465 Ga0395905_0345552
466 Ga0395901_0013949
467 Ga0237819_00006
468 Ga0237816_00467
469 Ga0439436_0001797
470 Ga0439436_0014897
471 Ga0439447_001803
472 Ga0439465_0000538
473 Ga0439465_0013864
474 Ga0451793_0610660
475 Ga0451795_0694669
476 Ga0451807_0241764
477 Ga0451807_1155419
478 Ga0451837_0285352
479 Ga0439445_0002429
480 Ga0439449_0000048
481 Ga0439449_0004578
482 Ga0439449_0033077
483 Ga0451577_0002087
484 Ga0453684_0087357
485 Ga0451576_0195970
486 Ga0495627_017777
487 Ga0495638_0005405
488 Ga0495638_0034979
489 Ga0495607_0008374
490 Ga0495606_0066697
491 Ga0495610_0002267
492 Ga0495610_0045590
493 Ga0495616_0104695
494 Ga0495631_0016790
495 Ga0495643_0001267
496 Ga0495663_0015448
497 Ga0495598_0113437
498 Ga0495656_0007003
499 Ga0495671_0011600
500 Ga0495636_0020050
501 Ga0495672_0001346
502 Ga0495681_0043082
503 Ga0496100_0158895
504 Ga0496108_0269013
505 Ga0496112_0160521
506 Ga0496113_0263396
507 Ga0496114_0021142
508 Ga0496115_0330330
509 Ga0496116_0069288
510 Ga0496117_0001068
511 Ga0496117_0015502
512 Ga0496117_0028228
513 Ga0496118_0001160
514 Ga0496118_0065596
515 Ga0496118_0099251
516 Ga0496119_0000929
517 Ga0496119_0032188
518 Ga0496120_0000943
519 Ga0496120_0031146
520 Ga0496121_0006274
521 Ga0496121_0060545
522 Ga0496122_0009022
523 Ga0496122_0018188
524 Ga0496122_0020793
525 Ga0496122_0138673
526 Ga0496123_0007154
527 Ga0496123_0018023
528 Ga0496123_0031384
529 Ga0496123_0046424
530 Ga0496123_0148224
531 Ga0496124_0000032
532 Ga0496124_0001083
533 Ga0496124_0029845
534 Ga0496124_0118680
535 Ga0496124_0166385
536 Ga0496124_0331701
537 Ga0496125_0047814
538 Ga0496125_0068110
539 Ga0496125_0079356
540 Ga0496125_0088493
541 Ga0496125_0103387
542 Ga0496125_0215752
543 Ga0496126_0032196
544 Ga0496126_0037743
545 Ga0496126_0060614
546 Ga0501032_0035192
547 Ga0501032_0074239
548 Ga0501033_0004728
549 Ga0501033_0015922
550 Ga0501034_0010693
551 Ga0501034_0012346
552 Ga0501034_0051132
553 Ga0501036_0139804
554 Ga0501037_0053989
555 Ga0501038_0084824
556 Ga0501043_0001038
557 Ga0501043_0028401
558 Ga0501068_0282475
559 Ga0501069_0010337
560 Ga0501070_0033640
561 Ga0501071_0161787
562 Ga0501074_0004172
563 Ga0501225_0003316
564 Ga0501080_0030016
565 Ga0501265_001304
566 Ga0501035_0327277
567 nmdc:mga00v17_32937_c1
568 nmdc:mga00v17_38099_c1
569 Ga0500634_0000094
570 2547501359
571 2572253467
572 2578459163
573 2643818961
574 2643879482
575 2643905725
576 2643913142
577 2643941368
578 2643974362
579 2644080387
580 2644662906
581 2644697000
582 2644698139
583 2747951029
584 2748017172
585 2765578154
586 2816516216
587 2819660349
588 2842393597
589 2842759370
590 2842783581
591 2848700052
592 2852651523
593 2852689117
594 2857442988
595 2874220809
596 2894414682
597 2895499176
598 2895512198
599 2895522209
600 2895527348
601 2919090839
602 2919130381
603 2919136971
604 2919516513
605 2919678603
606 2923517825
607 2928496823
608 2929198614
609 2931381569
610 2937611640
611 2939592220
612 2939625075
613 2939627574
614 2941476951
615 2941489569
616 2961047574
617 2961068404
618 2974309603
619 2977250350
620 2984515184
621 2987607539
622 2995950894
623 8002871695
624 8021624851
625 8021627832
626 8021649629

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06574

FAD_syn

FAD synthetase

55

211

0.98

PF01687

Flavokinase

Riboflavin kinase

228

349

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a89-assembly1.cif.gz_A crystal structure of the riboflavin kinase module of fad synthetase from corynebacterium ammoniagenes in complex with fmn and adp(p 21 21 21) 0.8903 189 307
1s4m-assembly1.cif.gz_A crystal structure of flavin binding to fad synthetase from thermotoga maritina 0.8801 19 307
2i1l-assembly2.cif.gz_B crystal structure of the c2 form of fad synthetase from thermotoga maritima 0.8791 19 307
1t6z-assembly1.cif.gz_B crystal structure of riboflavin bound tm379 0.8785 19 307
1s4m-assembly2.cif.gz_B crystal structure of flavin binding to fad synthetase from thermotoga maritina 0.8751 19 307
ID Description Score Start End Superfamily
af_P0AG40_1_186_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.954 3 186 3.40.50.620
af_P0AG40_1_186_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9392 3 186 3.40.50.620
af_I6X5C9_8_196_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9374 3 186 3.40.50.620
af_P0AG40_187_311_2.40.30.30 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Riboflavin kinase-like 0.9329 187 310 2.40.30.30
af_P0AG40_187_311_2.40.30.30 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Riboflavin kinase-like 0.9186 187 310 2.40.30.30
ID Description Score Start End GO Terms
AF-A0A7V5ZEA9-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9831 16 182 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398
AF-A0A2N1X852-F1-model_v4 deleted 0.9771 1 97
AF-A0A375CQ85-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9659 3 187 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398
AF-A0A536EM64-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9616 4 180 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398
AF-T1BQG4-F1-model_v4 Riboflavin biosynthesis protein RibF 0.9611 70 225 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398

Map