F403871

General Info

Members Datasets Scaffolds Average Seq Length
316 167 262 375

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0001262|Ga0496115_0001262_8550_9842
Length 430
Sequence MTFMPSLPTATPSGRGAAPIAILAVAAFVIVTTEFLIVGLLPALAHELRISISAAGQLVTLFAFTVMLFGPLLTGLLSHVERKRLFVIILLIFAVSNALAAMAPNIWVLALARFIAALLLPVFWGTASETAGQLAGPLRAGRAVSMVYLGISAALLFGIPLGTLAAHAFGWRVAFALLAGLSLLMAMLIAAFMPTLALPGRMRLVEQARILRDPRFVAHVGLSVLIFTAMFTAYTYLADTLETLVGVAPGQVGWWLMGFGAIGLIGNWLGGRAVDRSPLGATAFFVVILGIGMAASVSLAGARGWFDLPFVFWGVAYTALFPICQVRVMRVASHAQALAGTLNVSAANAGIGLGAMIGGLVIPHWGLPAVGYLATAMAVLALLAIPFIARLRTSQAYTSDLSRCQVFTPTTVACGESDLSPLHPTIARKT

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
4 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
5 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
6 2721755523 Delftia sp. HK171 Isolate Unclassified
7 2738541277 Variovorax sp. GV051 Isolate Unclassified
8 2738541297 Duganella sp. GV083 Isolate Unclassified
9 2738541357 Duganella sp. GV053 Isolate Unclassified
10 2738543003 Duganella sp. GV066 Isolate Unclassified
11 2738543019 Variovorax sp. GV040 Isolate Unclassified
12 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
13 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
14 2738543026 Duganella sp. GV089 Isolate Unclassified
15 2738543029 Duganella sp. GV039 Isolate Unclassified
16 2739367700 Dyella sp. YR388 Isolate Unclassified
17 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
18 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
19 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
20 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
21 2821131069 Duganella sp. 1224 Isolate Unclassified
22 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
23 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
24 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
25 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
26 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
27 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
28 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
29 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
30 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
31 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
32 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
33 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
34 2857558681 Duganella sp. R-74565 Isolate Unclassified
35 2858950400 Achromobacter sp. K91 Isolate Unclassified
36 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
37 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
38 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
39 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
40 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
41 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
42 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
43 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
44 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
45 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
46 2928963466 Dyella japonica 1073 Isolate Unclassified
47 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
48 2941479691
49 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
50 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
51 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
52 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
53 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
54 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
55 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
56 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
57 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
58 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
59 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
60 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
61 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
62 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
63 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
64 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
65 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
66 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
67 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
81 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
82 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
85 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
88 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
102 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
103 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
104 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
105 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
106 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
107 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
116 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
117 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
141 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
142 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
159 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
164 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
165 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
166 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
167 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.91
Metatranscriptomes 0
Isolates 17.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.65
Nodule 2.22
Rhizoplane 2.53
Rhizosphere 67.09
Stem 0
Stem Tuber 0
Unclassified 21.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_4645546 2162886011 Bacteria 3981
2 JGI25162J39368_1003560 3300002737 Bacteria 4380
3 rootH2_10005102 3300003320 Bacteria 36213
4 rootH1_10012428 3300003323 Bacteria 18800
5 Ga0055542_1000223 3300003762 Bacteria 68138
6 Ga0055536_1000398 3300003781 Bacteria 31589
7 Ga0065165_1006495 3300005262 Bacteria 6112
8 Ga0065712_10067823 3300005290 Bacteria 28676
9 Ga0070661_100023013 3300005344 Bacteria 4463
10 Ga0068851_10049992 3300005834 Bacteria 2122
11 Ga0068860_100072308 3300005843 Unclassified 3277
12 Ga0075362_10089504 3300006177 Bacteria 1427
13 Ga0075369_10064387 3300006186 Bacteria 1605
14 Ga0105251_10000037 3300009011 Bacteria 117409
15 Ga0105251_10000246 3300009011 Bacteria 54734
16 Ga0105251_10015166 3300009011 Bacteria 4223
17 Ga0105251_10021254 3300009011 Bacteria 3392
18 Ga0105251_10042926 3300009011 Bacteria 2192
19 Ga0105244_10002076 3300009036 Bacteria 15415
20 Ga0105250_10000197 3300009092 Bacteria 51321
21 Ga0105250_10020963 3300009092 Bacteria 2639
22 Ga0105250_10030780 3300009092 Bacteria 2157
23 Ga0105250_10036425 3300009092 Bacteria 1974
24 Ga0105243_10006211 3300009148 Bacteria 9240
25 Ga0105243_10051928 3300009148 Bacteria 3245
26 Ga0105248_10146577 3300009177 Bacteria 2664
27 Ga0105238_10000712 3300009551 Bacteria 34771
28 Ga0105246_10015409 3300011119 Bacteria 4829
29 Ga0157373_10001460 3300013100 Bacteria 18078
30 Ga0157373_10044117 3300013100 Bacteria 3184
31 Ga0157371_10000001 3300013102 Bacteria 1162285
32 Ga0157370_10000379 3300013104 Bacteria 56039
33 Ga0157370_10152944 3300013104 Bacteria 2147
34 Ga0157369_10333627 3300013105 Bacteria 1575
35 Ga0157372_10004296 3300013307 Bacteria 15231
36 Ga0182008_10012149 3300014497 Bacteria 4553
37 Ga0182006_1000417 3300015261 Bacteria 34124
38 Ga0182007_10011370 3300015262 Bacteria 3468
39 Ga0182005_1013162 3300015265 Bacteria 2328
40 Ga0228711_1000090 3300022739 Bacteria 71335
41 Ga0209672_101178 3300025228 Bacteria 10653
42 Ga0207427_103517 3300025231 Bacteria 3227
43 Ga0209437_100844 3300025233 Bacteria 13302
44 Ga0209258_102069 3300025242 Bacteria 5691
45 Ga0209148_1000005 3300025254 Bacteria 1806504
46 Ga0209233_1020834 3300025261 Bacteria 1710
47 Ga0209676_1000190 3300025292 Bacteria 140482
48 Ga0207696_1000117 3300025711 Bacteria 148004
49 Ga0207696_1004189 3300025711 Bacteria 6277
50 Ga0207696_1010056 3300025711 Bacteria 3491
51 Ga0207655_1000039 3300025728 Bacteria 341249
52 Ga0207655_1000100 3300025728 Bacteria 186348
53 Ga0207655_1003727 3300025728 Bacteria 11191
54 Ga0207655_1015699 3300025728 Bacteria 4193
55 Ga0207655_1053609 3300025728 Bacteria 1610
56 Ga0207713_1000160 3300025735 Bacteria 100682
57 Ga0207713_1000226 3300025735 Bacteria 76459
58 Ga0207713_1013358 3300025735 Bacteria 4333
59 Ga0207713_1032607 3300025735 Bacteria 2285
60 Ga0207695_10001540 3300025913 Bacteria 37977
61 Ga0207671_10001875 3300025914 Bacteria 23385
62 Ga0207694_10001517 3300025924 Bacteria 19777
63 Ga0207694_10025459 3300025924 Bacteria 4498
64 Ga0207709_10001923 3300025935 Bacteria 13649
65 Ga0207709_10001957 3300025935 Bacteria 13470
66 Ga0207709_10033377 3300025935 Bacteria 3021
67 Ga0207711_10059309 3300025941 Bacteria 3295
68 Ga0207667_10198219 3300025949 Bacteria 2060
69 Ga0207640_10013050 3300025981 Bacteria 4751
70 Ga0307412_10000583 3300031911 Bacteria 21605
71 Ga0307510_10190472 3300033180 Bacteria 1600
72 Ga0439438_000131 3300041405 Bacteria 34055
73 Ga0439438_000746 3300041405 Bacteria 14598
74 Ga0439447_002133 3300041407 Bacteria 7257
75 Ga0439466_0013305 3300041411 Bacteria 3012
76 Ga0439452_002180 3300042010 Bacteria 7400
77 Ga0439463_022553 3300042016 Bacteria 1576
78 Ga0495617_000023 3300046452 Bacteria 183865
79 Ga0495617_001131 3300046452 Bacteria 12060
80 Ga0495627_000354 3300046453 Bacteria 43047
81 Ga0495603_0044064 3300046455 Bacteria 2663
82 Ga0495591_000035 3300046458 Bacteria 169656
83 Ga0495591_000054 3300046458 Bacteria 135364
84 Ga0495591_000116 3300046458 Bacteria 92275
85 Ga0495638_0000009 3300046460 Bacteria 525345
86 Ga0495638_0000094 3300046460 Bacteria 142168
87 Ga0495638_0097713 3300046460 Bacteria 1760
88 Ga0495653_0000014 3300046463 Bacteria 215253
89 Ga0495653_0002851 3300046463 Bacteria 13814
90 Ga0495650_0000073 3300046471 Bacteria 253286
91 Ga0495650_0000111 3300046471 Bacteria 197931
92 Ga0495650_0000395 3300046471 Bacteria 73239
93 Ga0495650_0002042 3300046471 Bacteria 17626
94 Ga0495650_0002240 3300046471 Bacteria 16176
95 Ga0495650_0011069 3300046471 Bacteria 4978
96 Ga0495605_0000001 3300046474 Bacteria 614538
97 Ga0495605_0000128 3300046474 Bacteria 100439
98 Ga0495605_0000603 3300046474 Bacteria 28310
99 Ga0495605_0004976 3300046474 Bacteria 7764
100 Ga0495605_0006143 3300046474 Bacteria 6925
101 Ga0495605_0023358 3300046474 Bacteria 3254
102 Ga0495585_0000072 3300046492 Bacteria 102939
103 Ga0495585_0000431 3300046492 Bacteria 40250
104 Ga0495596_0000791 3300046500 Bacteria 19236
105 Ga0495607_0000037 3300046501 Bacteria 138869
106 Ga0495607_0000053 3300046501 Bacteria 118035
107 Ga0495607_0000448 3300046501 Bacteria 41496
108 Ga0495607_0000493 3300046501 Bacteria 39452
109 Ga0495607_0000891 3300046501 Bacteria 27865
110 Ga0495607_0001075 3300046501 Bacteria 24954
111 Ga0495607_0006549 3300046501 Bacteria 8190
112 Ga0495607_0010931 3300046501 Bacteria 6072
113 Ga0495607_0011819 3300046501 Bacteria 5789
114 Ga0495607_0014300 3300046501 Bacteria 5173
115 Ga0495607_0022592 3300046501 Bacteria 3947
116 Ga0495607_0058622 3300046501 Bacteria 2200
117 Ga0495583_0000281 3300046506 Bacteria 82123
118 Ga0495583_0000924 3300046506 Bacteria 34532
119 Ga0495583_0050347 3300046506 Bacteria 1904
120 Ga0495606_0000011 3300046507 Bacteria 296816
121 Ga0495606_0000047 3300046507 Bacteria 207892
122 Ga0495606_0000085 3300046507 Bacteria 158006
123 Ga0495606_0000191 3300046507 Bacteria 107427
124 Ga0495606_0000255 3300046507 Bacteria 93984
125 Ga0495606_0000769 3300046507 Bacteria 49226
126 Ga0495606_0000774 3300046507 Bacteria 48973
127 Ga0495606_0003778 3300046507 Bacteria 15737
128 Ga0495610_0000007 3300046512 Bacteria 820919
129 Ga0495610_0003075 3300046512 Bacteria 13332
130 Ga0495610_0003405 3300046512 Bacteria 12410
131 Ga0495610_0017361 3300046512 Bacteria 4106
132 Ga0495616_0009819 3300046513 Bacteria 5573
133 Ga0495616_0017431 3300046513 Bacteria 3962
134 Ga0495616_0025790 3300046513 Bacteria 3135
135 Ga0495620_0000069 3300046515 Bacteria 86730
136 Ga0495620_0009709 3300046515 Bacteria 5108
137 Ga0495632_0000037 3300046519 Bacteria 158699
138 Ga0495632_0002263 3300046519 Bacteria 14832
139 Ga0495637_0000313 3300046520 Bacteria 37785
140 Ga0495637_0009568 3300046520 Bacteria 4724
141 Ga0495637_0014933 3300046520 Bacteria 3654
142 Ga0495637_0016202 3300046520 Bacteria 3487
143 Ga0495643_0000095 3300046522 Bacteria 148901
144 Ga0495643_0000261 3300046522 Bacteria 77011
145 Ga0495643_0001189 3300046522 Bacteria 25346
146 Ga0495643_0002120 3300046522 Bacteria 16364
147 Ga0495643_0017489 3300046522 Bacteria 4190
148 Ga0495648_0002406 3300046524 Bacteria 17366
149 Ga0495648_0008772 3300046524 Bacteria 7913
150 Ga0495648_0008926 3300046524 Bacteria 7835
151 Ga0495648_0013092 3300046524 Bacteria 6150
152 Ga0495648_0028450 3300046524 Bacteria 3722
153 Ga0495648_0082639 3300046524 Bacteria 1822
154 Ga0495654_0000034 3300046530 Bacteria 196519
155 Ga0495654_0000853 3300046530 Bacteria 23109
156 Ga0495654_0012154 3300046530 Bacteria 4633
157 Ga0495654_0048363 3300046530 Bacteria 2087
158 Ga0495654_0065455 3300046530 Bacteria 1735
159 Ga0495654_0069879 3300046530 Bacteria 1666
160 Ga0495609_0000013 3300046538 Bacteria 328540
161 Ga0495609_0001250 3300046538 Bacteria 17487
162 Ga0495609_0001600 3300046538 Bacteria 14800
163 Ga0495597_0000085 3300046542 Bacteria 82014
164 Ga0495597_0000628 3300046542 Bacteria 28802
165 Ga0495622_0023185 3300046557 Bacteria 2893
166 Ga0495622_0057229 3300046557 Bacteria 1807
167 Ga0495668_0010511 3300046616 Bacteria 5599
168 Ga0495668_0013731 3300046616 Bacteria 4766
169 Ga0495611_0001615 3300046648 Bacteria 10973
170 Ga0495625_0000016 3300046660 Bacteria 311353
171 Ga0495625_0034491 3300046660 Bacteria 3734
172 Ga0495625_0112831 3300046660 Bacteria 1857
173 Ga0495625_0136738 3300046660 Bacteria 1656
174 Ga0495661_0000010 3300046665 Bacteria 284261
175 Ga0495661_0000057 3300046665 Bacteria 135044
176 Ga0495661_0001699 3300046665 Bacteria 17842
177 Ga0495661_0004323 3300046665 Bacteria 10286
178 Ga0495661_0045948 3300046665 Bacteria 2668
179 Ga0495671_0000009 3300046692 Bacteria 369875
180 Ga0495671_0001131 3300046692 Bacteria 18367
181 Ga0495671_0025751 3300046692 Bacteria 3054
182 Ga0495671_0040864 3300046692 Bacteria 2337
183 Ga0495671_0092543 3300046692 Bacteria 1479
184 Ga0495649_0000110 3300046694 Bacteria 72175
185 Ga0495649_0000938 3300046694 Bacteria 23043
186 Ga0495649_0001262 3300046694 Bacteria 19481
187 Ga0495649_0070972 3300046694 Bacteria 1867
188 Ga0495660_0003692 3300046810 Bacteria 9413
189 Ga0495660_0006767 3300046810 Bacteria 6759
190 Ga0495660_0010044 3300046810 Bacteria 5505
191 Ga0495660_0036503 3300046810 Bacteria 2741
192 Ga0495672_0000013 3300047320 Bacteria 511827
193 Ga0495672_0003126 3300047320 Bacteria 14429
194 Ga0495672_0019865 3300047320 Bacteria 4418
195 Ga0495672_0052087 3300047320 Bacteria 2406
196 Ga0495676_0000001 3300047321 Bacteria 624167
197 Ga0495676_0009826 3300047321 Bacteria 8692
198 Ga0495683_0000914 3300047323 Bacteria 20821
199 Ga0495683_0002538 3300047323 Bacteria 10967
200 Ga0495683_0003044 3300047323 Bacteria 9854
201 Ga0495677_0007188 3300047445 Bacteria 4167
202 Ga0495679_001223 3300047446 Bacteria 15226
203 Ga0495673_0000015 3300047469 Bacteria 598766
204 Ga0495673_0000032 3300047469 Bacteria 375856
205 Ga0495673_0002398 3300047469 Bacteria 13227
206 Ga0495673_0003650 3300047469 Bacteria 10051
207 Ga0495673_0006758 3300047469 Bacteria 6703
208 Ga0495673_0014445 3300047469 Bacteria 4106
209 Ga0495673_0016541 3300047469 Bacteria 3769
210 Ga0495673_0031042 3300047469 Bacteria 2505
211 Ga0495686_0014131 3300047472 Bacteria 5506
212 Ga0495686_0069611 3300047472 Bacteria 2169
213 Ga0495686_0108264 3300047472 Bacteria 1670
214 Ga0495626_0000008 3300048091 Bacteria 271853
215 Ga0495626_0000026 3300048091 Bacteria 207698
216 Ga0496104_0104137 3300048907 Bacteria 2719
217 Ga0496114_0002820 3300048917 Bacteria 13318
218 Ga0496115_0000046 3300048918 Bacteria 112212
219 Ga0496115_0001262 3300048918 Bacteria 18137
220 Ga0496115_0020538 3300048918 Bacteria 5095
221 Ga0496116_0004282 3300048919 Bacteria 13683
222 Ga0496117_0054676 3300048920 Bacteria 2795
223 Ga0496118_0001857 3300048921 Bacteria 30242
224 Ga0496118_0076606 3300048921 Bacteria 2377
225 Ga0496118_0088694 3300048921 Bacteria 2138
226 Ga0496119_0000189 3300048922 Bacteria 87262
227 Ga0496120_0001997 3300048923 Bacteria 22204
228 Ga0496121_0000242 3300048924 Bacteria 116995
229 Ga0496121_0003237 3300048924 Bacteria 23413
230 Ga0496121_0037233 3300048924 Bacteria 4324
231 Ga0496121_0075079 3300048924 Bacteria 2702
232 Ga0496121_0109328 3300048924 Unclassified 2113
233 Ga0496122_0000766 3300048925 Bacteria 62103
234 Ga0496122_0007990 3300048925 Bacteria 11559
235 Ga0496122_0021476 3300048925 Bacteria 5778
236 Ga0496122_0027331 3300048925 Bacteria 4883
237 Ga0496123_0000320 3300048926 Bacteria 91826
238 Ga0496123_0014642 3300048926 Bacteria 6483
239 Ga0496123_0035690 3300048926 Bacteria 3539
240 Ga0496123_0054241 3300048926 Bacteria 2641
241 Ga0496123_0107481 3300048926 Bacteria 1605
242 Ga0496124_0000004 3300048927 Bacteria 976131
243 Ga0496124_0000248 3300048927 Bacteria 104502
244 Ga0496124_0000284 3300048927 Bacteria 96345
245 Ga0496124_0001275 3300048927 Bacteria 38325
246 Ga0496124_0001908 3300048927 Bacteria 28611
247 Ga0496124_0002350 3300048927 Bacteria 24975
248 Ga0496124_0003301 3300048927 Bacteria 19889
249 Ga0496126_0002296 3300048929 Bacteria 26320
250 Ga0496126_0083029 3300048929 Bacteria 2828
251 Ga0495678_000008 3300049459 Bacteria 445926
252 Ga0495678_013656 3300049459 Bacteria 3803
253 Ga0495678_035829 3300049459 Bacteria 2030
254 Ga0495682_0000014 3300049460 Bacteria 249706
255 Ga0500594_0006235 3300053118 Bacteria 2674
256 Ga0500618_000439 3300053125 Bacteria 27279
257 Ga0500618_001143 3300053125 Bacteria 12886
258 Ga0500618_004826 3300053125 Bacteria 4217
259 Ga0500618_009244 3300053125 Bacteria 2700
260 Ga0500573_0007355 3300053140 Bacteria 6001
261 Ga0500586_007007 3300053145 Bacteria 2976
262 Ga0500634_0033892 3300053161 Bacteria 2783

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300047472 Ga0495686_0014131 Ga0495686_0014131_3539_4654 316
2 3300048925 Ga0496122_0021476 Ga0496122_0021476_1780_2739 316
3 3300049459 Ga0495678_035829 Ga0495678_035829_811_1926 316
4 3300042016 Ga0439463_022553 Ga0439463_022553_430_1545 320
5 3300046492 Ga0495585_0000072 Ga0495585_0000072_58354_59469 320
6 3300046665 Ga0495661_0000010 Ga0495661_0000010_168684_169799 320
7 3300046471 Ga0495650_0002240 Ga0495650_0002240_1843_2958 323
8 3300046512 Ga0495610_0017361 Ga0495610_0017361_2531_3646 323
9 3300046471 Ga0495650_0000073 Ga0495650_0000073_67363_68478 328
10 3300046474 Ga0495605_0004976 Ga0495605_0004976_2223_3338 328
11 3300046512 Ga0495610_0003405 Ga0495610_0003405_9965_11080 328
12 3300046513 Ga0495616_0009819 Ga0495616_0009819_691_1806 328
13 3300046515 Ga0495620_0009709 Ga0495620_0009709_1412_2527 328
14 3300046522 Ga0495643_0017489 Ga0495643_0017489_2537_3652 328
15 3300046538 Ga0495609_0000013 Ga0495609_0000013_92901_94016 328
16 3300046557 Ga0495622_0023185 Ga0495622_0023185_1137_2252 328
17 3300046810 Ga0495660_0010044 Ga0495660_0010044_3129_4244 328
18 3300047320 Ga0495672_0019865 Ga0495672_0019865_2680_3795 328
19 3300047321 Ga0495676_0000001 Ga0495676_0000001_413139_414254 328
20 3300047446 Ga0495679_001223 Ga0495679_001223_1264_2379 328
21 3300048091 Ga0495626_0000008 Ga0495626_0000008_63406_64521 328
22 3300046524 Ga0495648_0082639 Ga0495648_0082639_478_1641 332
23 3300009011 Ga0105251_10000246 Ga0105251_1000024619 337
24 3300009092 Ga0105250_10000197 Ga0105250_1000019720 337
25 3300046692 Ga0495671_0025751 Ga0495671_0025751_786_1970 337
26 3300046530 Ga0495654_0048363 Ga0495654_0048363_796_1983 339
27 3300046692 Ga0495671_0040864 Ga0495671_0040864_287_1474 339
28 3300047469 Ga0495673_0014445 Ga0495673_0014445_2815_4002 339
29 3300048924 Ga0496121_0037233 Ga0496121_0037233_1205_2353 342
30 3300047323 Ga0495683_0000914 Ga0495683_0000914_7165_8325 343
31 3300013100 Ga0157373_10001460 Ga0157373_100014608 344
32 3300046474 Ga0495605_0000001 Ga0495605_0000001_424865_426055 344
33 3300046506 Ga0495583_0050347 Ga0495583_0050347_39_1229 344
34 3300046524 Ga0495648_0008926 Ga0495648_0008926_891_2075 344
35 3300053118 Ga0500594_0006235 Ga0500594_0006235_435_1619 344
36 3300046507 Ga0495606_0000774 Ga0495606_0000774_31143_32306 345
37 3300046520 Ga0495637_0016202 Ga0495637_0016202_518_1633 345
38 3300046660 Ga0495625_0112831 Ga0495625_0112831_461_1609 345
39 3300046471 Ga0495650_0011069 Ga0495650_0011069_1242_2390 346
40 3300046506 Ga0495583_0000281 Ga0495583_0000281_18778_19968 346
41 3300046519 Ga0495632_0000037 Ga0495632_0000037_113147_114337 346
42 3300046665 Ga0495661_0000057 Ga0495661_0000057_78638_79828 346
43 3300046501 Ga0495607_0000493 Ga0495607_0000493_15872_17032 347
44 3300046507 Ga0495606_0000085 Ga0495606_0000085_49949_51079 347
45 3300046452 Ga0495617_001131 Ga0495617_001131_4974_6137 348
46 3300048926 Ga0496123_0014642 Ga0496123_0014642_2790_3929 348
47 3300047472 Ga0495686_0108264 Ga0495686_0108264_258_1400 350
48 3300009011 Ga0105251_10000037 Ga0105251_1000003769 351
49 3300025735 Ga0207713_1000226 Ga0207713_10002267 351
50 3300033180 Ga0307510_10190472 Ga0307510_101904722 351
51 3300046507 Ga0495606_0000047 Ga0495606_0000047_99974_101161 351
52 3300046530 Ga0495654_0000853 Ga0495654_0000853_8170_9357 351
53 3300046616 Ga0495668_0013731 Ga0495668_0013731_560_1747 351
54 3300046648 Ga0495611_0001615 Ga0495611_0001615_6472_7659 351
55 3300046660 Ga0495625_0000016 Ga0495625_0000016_309755_310942 351
56 3300048924 Ga0496121_0003237 Ga0496121_0003237_16199_17392 351
57 3300048926 Ga0496123_0035690 Ga0496123_0035690_1486_2679 351
58 3300053125 Ga0500618_001143 Ga0500618_001143_5590_6729 351
59 3300013104 Ga0157370_10152944 Ga0157370_101529442 352
60 3300046474 Ga0495605_0006143 Ga0495605_0006143_1627_2820 352
61 3300046507 Ga0495606_0003778 Ga0495606_0003778_10362_11555 352
62 3300046530 Ga0495654_0000034 Ga0495654_0000034_133421_134569 352
63 3300013105 Ga0157369_10333627 Ga0157369_103336272 353
64 3300046458 Ga0495591_000054 Ga0495591_000054_27873_29060 353
65 3300046501 Ga0495607_0022592 Ga0495607_0022592_1382_2575 353
66 3300046694 Ga0495649_0000110 Ga0495649_0000110_23674_24858 353
67 3300031911 Ga0307412_10000583 Ga0307412_1000058316 354
68 3300046463 Ga0495653_0000014 Ga0495653_0000014_144631_145770 354
69 3300047469 Ga0495673_0003650 Ga0495673_0003650_3561_4751 354
70 3300047469 Ga0495673_0000015 Ga0495673_0000015_17954_19081 356
71 3300048927 Ga0496124_0003301 Ga0496124_0003301_13920_15107 356
72 3300046507 Ga0495606_0000255 Ga0495606_0000255_16716_17900 357
73 3300046692 Ga0495671_0001131 Ga0495671_0001131_817_1998 357
74 3300046694 Ga0495649_0001262 Ga0495649_0001262_1456_2640 357
75 3300053125 Ga0500618_004826 Ga0500618_004826_2942_4126 357
76 3300046616 Ga0495668_0010511 Ga0495668_0010511_26_1222 358
77 3300046692 Ga0495671_0000009 Ga0495671_0000009_111795_112937 358
78 3300046522 Ga0495643_0000095 Ga0495643_0000095_27841_29022 359
79 3300009011 Ga0105251_10042926 Ga0105251_100429262 360
80 3300025711 Ga0207696_1000117 Ga0207696_1000117111 360
81 3300025728 Ga0207655_1015699 Ga0207655_10156993 360
82 3300025735 Ga0207713_1000160 Ga0207713_100016019 360
83 3300046507 Ga0495606_0000011 Ga0495606_0000011_104924_106123 360
84 3300046810 Ga0495660_0006767 Ga0495660_0006767_4379_5575 360
85 3300047320 Ga0495672_0052087 Ga0495672_0052087_1115_2311 360
86 3300006177 Ga0075362_10089504 Ga0075362_100895041 361
87 3300048926 Ga0496123_0107481 Ga0496123_0107481_62_1180 361
88 3300046522 Ga0495643_0002120 Ga0495643_0002120_5444_6628 363
89 3300046694 Ga0495649_0070972 Ga0495649_0070972_232_1416 363
90 3300047320 Ga0495672_0000013 Ga0495672_0000013_152880_153998 363
91 3300009011 Ga0105251_10021254 Ga0105251_100212544 364
92 3300015265 Ga0182005_1013162 Ga0182005_10131622 364
93 3300025728 Ga0207655_1000100 Ga0207655_100010025 364
94 3300025735 Ga0207713_1032607 Ga0207713_10326072 364
95 3300046458 Ga0495591_000116 Ga0495591_000116_4891_6081 364
96 3300046474 Ga0495605_0000128 Ga0495605_0000128_29924_31114 364
97 3300046501 Ga0495607_0000037 Ga0495607_0000037_3412_4599 364
98 3300046501 Ga0495607_0000053 Ga0495607_0000053_80355_81545 364
99 3300046515 Ga0495620_0000069 Ga0495620_0000069_16091_17281 364
100 3300046520 Ga0495637_0000313 Ga0495637_0000313_23432_24619 364
101 3300046530 Ga0495654_0069879 Ga0495654_0069879_284_1471 364
102 3300046665 Ga0495661_0001699 Ga0495661_0001699_40_1230 364
103 3300047469 Ga0495673_0006758 Ga0495673_0006758_639_1829 364
104 3300047469 Ga0495673_0016541 Ga0495673_0016541_353_1540 364
105 3300048927 Ga0496124_0000284 Ga0496124_0000284_60321_61511 364
106 3300049459 Ga0495678_000008 Ga0495678_000008_439337_440524 364
107 3300049460 Ga0495682_0000014 Ga0495682_0000014_151842_153032 364
108 3300013104 Ga0157370_10000379 Ga0157370_100003794 365
109 3300046452 Ga0495617_000023 Ga0495617_000023_105553_106704 365
110 3300046501 Ga0495607_0011819 Ga0495607_0011819_3985_5181 365
111 3300046501 Ga0495607_0000448 Ga0495607_0000448_3119_4303 366
112 3300046513 Ga0495616_0017431 Ga0495616_0017431_514_1698 366
113 3300046501 Ga0495607_0006549 Ga0495607_0006549_6342_7535 367
114 3300046692 Ga0495671_0092543 Ga0495671_0092543_233_1381 367
115 3300048922 Ga0496119_0000189 Ga0496119_0000189_75692_76903 367
116 3300048923 Ga0496120_0001997 Ga0496120_0001997_2970_4181 367
117 3300053125 Ga0500618_009244 Ga0500618_009244_667_1935 368
118 3300046522 Ga0495643_0001189 Ga0495643_0001189_15384_16601 369
119 3300048927 Ga0496124_0002350 Ga0496124_0002350_17559_18755 369
120 3300009177 Ga0105248_10146577 Ga0105248_101465773 370
121 3300025941 Ga0207711_10059309 Ga0207711_100593093 370
122 3300046460 Ga0495638_0097713 Ga0495638_0097713_501_1652 370
123 3300046506 Ga0495583_0000924 Ga0495583_0000924_2087_3298 370
124 3300046520 Ga0495637_0009568 Ga0495637_0009568_456_1619 370
125 3300048921 Ga0496118_0076606 Ga0496118_0076606_913_2094 370
126 3300048924 Ga0496121_0075079 Ga0496121_0075079_84_1265 370
127 3300046512 Ga0495610_0000007 Ga0495610_0000007_388353_389492 371
128 3300046524 Ga0495648_0028450 Ga0495648_0028450_1837_2991 372
129 3300047323 Ga0495683_0003044 Ga0495683_0003044_120_1274 372
130 3300048925 Ga0496122_0027331 Ga0496122_0027331_766_1920 372
131 3300053145 Ga0500586_007007 Ga0500586_007007_1258_2412 372
132 iso_pu_bacteria 2738541297 2738827567 372
133 iso_pu_bacteria 2738541357 2739151363 372
134 iso_pu_bacteria 2738543003 2739193283 372
135 iso_pu_bacteria 2738543026 2739319759 372
136 iso_pu_bacteria 2738543029 2739338000 372
137 iso_pu_bacteria 2821131069 2821136055 372
138 3300009011 Ga0105251_10015166 Ga0105251_100151662 373
139 3300013102 Ga0157371_10000001 Ga0157371_1000000169 373
140 3300025711 Ga0207696_1004189 Ga0207696_10041896 373
141 3300041405 Ga0439438_000746 Ga0439438_000746_6750_7940 373
142 3300048927 Ga0496124_0000004 Ga0496124_0000004_480916_482040 373
143 iso_pu_bacteria 2857558681 2857561399 373
144 3300025949 Ga0207667_10198219 Ga0207667_101982192 374
145 iso_pu_bacteria 2857357740 2857366112 374
146 3300005834 Ga0068851_10049992 Ga0068851_100499922 375
147 3300009551 Ga0105238_10000712 Ga0105238_1000071214 375
148 3300025913 Ga0207695_10001540 Ga0207695_100015404 375
149 3300025914 Ga0207671_10001875 Ga0207671_1000187526 375
150 3300025924 Ga0207694_10001517 Ga0207694_1000151714 375
151 3300025981 Ga0207640_10013050 Ga0207640_100130502 375
152 3300053125 Ga0500618_000439 Ga0500618_000439_22462_23673 375
153 3300003323 rootH1_10012428 rootH1_100124282 376
154 3300009092 Ga0105250_10036425 Ga0105250_100364252 376
155 3300015261 Ga0182006_1000417 Ga0182006_100041733 376
156 3300015262 Ga0182007_10011370 Ga0182007_100113702 376
157 3300046471 Ga0495650_0000395 Ga0495650_0000395_51097_52245 376
158 3300046492 Ga0495585_0000431 Ga0495585_0000431_37407_38555 376
159 3300046524 Ga0495648_0008772 Ga0495648_0008772_1870_3000 376
160 3300046530 Ga0495654_0012154 Ga0495654_0012154_3445_4590 376
161 3300046665 Ga0495661_0045948 Ga0495661_0045948_1481_2632 376
162 3300046810 Ga0495660_0036503 Ga0495660_0036503_865_2058 376
163 3300047469 Ga0495673_0000032 Ga0495673_0000032_184296_185444 376
164 3300003320 rootH2_10005102 rootH2_1000510216 377
165 3300009092 Ga0105250_10030780 Ga0105250_100307802 377
166 3300025711 Ga0207696_1010056 Ga0207696_10100563 377
167 3300046501 Ga0495607_0014300 Ga0495607_0014300_1813_3009 377
168 3300025728 Ga0207655_1000039 Ga0207655_1000039177 378
169 3300025735 Ga0207713_1013358 Ga0207713_10133584 378
170 3300046453 Ga0495627_000354 Ga0495627_000354_34066_35262 378
171 3300048917 Ga0496114_0002820 Ga0496114_0002820_11806_13017 378
172 3300048921 Ga0496118_0001857 Ga0496118_0001857_14000_15211 378
173 3300048925 Ga0496122_0000766 Ga0496122_0000766_33698_34909 378
174 3300048926 Ga0496123_0000320 Ga0496123_0000320_8168_9379 378
175 3300048927 Ga0496124_0000248 Ga0496124_0000248_78592_79776 378
176 3300048927 Ga0496124_0001908 Ga0496124_0001908_11362_12573 378
177 3300053140 Ga0500573_0007355 Ga0500573_0007355_1869_3065 378
178 3300005344 Ga0070661_100023013 Ga0070661_1000230133 379
179 3300005843 Ga0068860_100072308 Ga0068860_1000723082 379
180 3300013100 Ga0157373_10044117 Ga0157373_100441172 379
181 3300022739 Ga0228711_1000090 Ga0228711_10000902 379
182 3300025924 Ga0207694_10025459 Ga0207694_100254592 379
183 3300048918 Ga0496115_0020538 Ga0496115_0020538_3875_5080 379
184 3300048924 Ga0496121_0109328 Ga0496121_0109328_342_1547 379
185 3300046522 Ga0495643_0000261 Ga0495643_0000261_31558_32769 380
186 3300009092 Ga0105250_10020963 Ga0105250_100209633 381
187 3300013307 Ga0157372_10004296 Ga0157372_100042969 381
188 3300046455 Ga0495603_0044064 Ga0495603_0044064_552_1736 381
189 3300046538 Ga0495609_0001600 Ga0495609_0001600_9708_10904 381
190 3300047321 Ga0495676_0009826 Ga0495676_0009826_1334_2518 381
191 3300047469 Ga0495673_0031042 Ga0495673_0031042_770_1966 381
192 3300046660 Ga0495625_0034491 Ga0495625_0034491_1543_2739 382
193 3300041405 Ga0439438_000131 Ga0439438_000131_856_2046 384
194 3300041407 Ga0439447_002133 Ga0439447_002133_4974_6164 384
195 3300041411 Ga0439466_0013305 Ga0439466_0013305_1239_2429 384
196 3300042010 Ga0439452_002180 Ga0439452_002180_1575_2765 384
197 3300046471 Ga0495650_0002042 Ga0495650_0002042_1154_2356 384
198 3300046474 Ga0495605_0023358 Ga0495605_0023358_168_1370 384
199 3300046500 Ga0495596_0000791 Ga0495596_0000791_318_1520 384
200 3300046538 Ga0495609_0001250 Ga0495609_0001250_6694_7896 384
201 3300047320 Ga0495672_0003126 Ga0495672_0003126_7743_8945 384
202 3300047323 Ga0495683_0002538 Ga0495683_0002538_1680_2882 384
203 3300046463 Ga0495653_0002851 Ga0495653_0002851_6581_7780 385
204 3300046501 Ga0495607_0058622 Ga0495607_0058622_298_1497 385
205 3300046507 Ga0495606_0000191 Ga0495606_0000191_99224_100423 385
206 3300046542 Ga0495597_0000628 Ga0495597_0000628_1451_2749 385
207 iso_pu_bacteria 2818991440 2819566406 385
208 iso_pu_bacteria 2904463128 2904467021 385
209 3300046458 Ga0495591_000035 Ga0495591_000035_11341_12537 386
210 3300046474 Ga0495605_0000603 Ga0495605_0000603_16765_17961 386
211 3300046501 Ga0495607_0000891 Ga0495607_0000891_6717_7913 386
212 3300046520 Ga0495637_0014933 Ga0495637_0014933_1367_2563 386
213 3300046530 Ga0495654_0065455 Ga0495654_0065455_349_1545 386
214 3300046542 Ga0495597_0000085 Ga0495597_0000085_60657_61853 386
215 3300046810 Ga0495660_0003692 Ga0495660_0003692_1620_2816 386
216 3300046501 Ga0495607_0001075 Ga0495607_0001075_53_1219 387
217 3300046513 Ga0495616_0025790 Ga0495616_0025790_915_2081 387
218 3300046519 Ga0495632_0002263 Ga0495632_0002263_3040_4206 387
219 3300046665 Ga0495661_0004323 Ga0495661_0004323_6840_8006 387
220 3300047445 Ga0495677_0007188 Ga0495677_0007188_2884_4050 387
221 3300003781 Ga0055536_1000398 Ga0055536_10003986 388
222 3300025292 Ga0209676_1000190 Ga0209676_100019051 388
223 3300046524 Ga0495648_0013092 Ga0495648_0013092_2171_3424 388
224 iso_pu_bacteria 2738543020 2739286563 388
225 iso_pu_bacteria 2738543021 2739291876 388
226 3300006186 Ga0075369_10064387 Ga0075369_100643871 389
227 iso_pu_bacteria 2838714209 2838719275 389
228 iso_pu_bacteria 2838719591 2838724651 389
229 iso_pu_bacteria 2842170452 2842175521 389
230 iso_pu_bacteria 2842187318 2842192379 389
231 iso_pu_bacteria 2842211629 2842216779 389
232 iso_pu_bacteria 2842224351 2842229333 389
233 iso_pu_bacteria 2941479691 2941485019 389
234 iso_pu_bacteria 3007872151 3007872158 389
235 iso_pu_bacteria 2599185236 2599723568 390
236 iso_pu_bacteria 2600255283 2601623695 390
237 iso_pu_bacteria 2806310737 2807407953 390
238 iso_pu_bacteria 2806310745 2807456256 390
239 iso_pu_bacteria 8056120720 8056124003 390
240 iso_pu_bacteria 8056137416 8056139777 390
241 iso_pu_bacteria 2928963466 2928967183 391
242 iso_pu_bacteria 3007419365 3007423517 391
243 3300046512 Ga0495610_0003075 Ga0495610_0003075_11277_12461 392
244 3300048919 Ga0496116_0004282 Ga0496116_0004282_2843_4027 392
245 3300048920 Ga0496117_0054676 Ga0496117_0054676_1081_2265 392
246 3300048921 Ga0496118_0088694 Ga0496118_0088694_912_2096 392
247 3300048924 Ga0496121_0000242 Ga0496121_0000242_4569_5750 392
248 3300048925 Ga0496122_0007990 Ga0496122_0007990_9788_10972 392
249 3300048926 Ga0496123_0054241 Ga0496123_0054241_144_1328 392
250 3300048927 Ga0496124_0001275 Ga0496124_0001275_10493_11677 392
251 3300049459 Ga0495678_013656 Ga0495678_013656_1591_2775 392
252 iso_pu_bacteria 2842805378 2842805407 392
253 iso_pu_bacteria 2919134579 2919135046 392
254 iso_pu_bacteria 8054929484 8054931507 392
255 iso_pu_bacteria 2858950400 2858953192 393
256 iso_pu_bacteria 2919501602 2919501616 393
257 iso_pu_bacteria 2926063275 2926063289 393
258 iso_pu_bacteria 2941475908 2941476287 393
259 3300047469 Ga0495673_0002398 Ga0495673_0002398_7327_8517 394
260 iso_pu_bacteria 2738541277 2738721174 394
261 iso_pu_bacteria 2738543019 2739280373 394
262 iso_pu_bacteria 2857542790 2857546003 394
263 iso_pu_bacteria 2904439833 2904443677 394
264 iso_pu_bacteria 2904530477 2904532576 394
265 iso_pu_bacteria 2904584206 2904585070 394
266 iso_pu_bacteria 2904589729 2904593419 394
267 iso_pu_bacteria 2904601388 2904605602 394
268 3300002737 JGI25162J39368_1003560 JGI25162J39368_10035603 395
269 3300003762 Ga0055542_1000223 Ga0055542_10002238 395
270 3300005262 Ga0065165_1006495 Ga0065165_10064954 395
271 3300025231 Ga0207427_103517 Ga0207427_1035173 395
272 3300025233 Ga0209437_100844 Ga0209437_1008448 395
273 3300025242 Ga0209258_102069 Ga0209258_1020697 395
274 3300025254 Ga0209148_1000005 Ga0209148_1000005802 395
275 3300025261 Ga0209233_1020834 Ga0209233_10208341 395
276 3300025728 Ga0207655_1053609 Ga0207655_10536091 395
277 3300025935 Ga0207709_10001957 Ga0207709_100019575 395
278 3300046507 Ga0495606_0000769 Ga0495606_0000769_16970_18253 395
279 3300046694 Ga0495649_0000938 Ga0495649_0000938_6905_8188 395
280 3300048918 Ga0496115_0000046 Ga0496115_0000046_93968_95251 395
281 3300048929 Ga0496126_0002296 Ga0496126_0002296_24517_25800 395
282 3300053161 Ga0500634_0033892 Ga0500634_0033892_710_1903 395
283 iso_pu_bacteria 2599185155 2599330288 395
284 3300014497 Ga0182008_10012149 Ga0182008_100121494 396
285 3300046524 Ga0495648_0002406 Ga0495648_0002406_1106_2302 396
286 3300046501 Ga0495607_0010931 Ga0495607_0010931_71_1270 397
287 3300047472 Ga0495686_0069611 Ga0495686_0069611_833_2032 397
288 iso_pu_bacteria 2739367700 2739731057 397
289 iso_pu_bacteria 2808606418 2809143103 397
290 3300048091 Ga0495626_0000026 Ga0495626_0000026_140477_141679 398
291 iso_pu_bacteria 2919155634 2919159099 398
292 iso_pu_bacteria 3007803356 3007803823 398
293 3300009036 Ga0105244_10002076 Ga0105244_100020768 399
294 3300009148 Ga0105243_10006211 Ga0105243_100062116 399
295 3300011119 Ga0105246_10015409 Ga0105246_100154095 399
296 3300025728 Ga0207655_1003727 Ga0207655_10037278 399
297 3300025935 Ga0207709_10033377 Ga0207709_100333772 399
298 3300048918 Ga0496115_0001262 Ga0496115_0001262_8550_9842 399
299 iso_pu_bacteria 2547132130 2547502276 399
300 iso_pu_bacteria 2721755523 2722885720 399
301 iso_pu_bacteria 2961064222 2961065582 399
302 iso_pu_bacteria 2826581358 2826586023 400
303 iso_pu_bacteria 2842815866 2842819058 400
304 iso_pu_bacteria 2842849001 2842853405 400
305 3300009148 Ga0105243_10051928 Ga0105243_100519281 401
306 3300025935 Ga0207709_10001923 Ga0207709_100019235 401
307 3300046460 Ga0495638_0000094 Ga0495638_0000094_130858_132063 401
308 3300046471 Ga0495650_0000111 Ga0495650_0000111_75924_77129 401
309 3300048907 Ga0496104_0104137 Ga0496104_0104137_1073_2278 401
310 3300025228 Ga0209672_101178 Ga0209672_1011782 403
311 3300046460 Ga0495638_0000009 Ga0495638_0000009_441446_442729 403
312 3300046557 Ga0495622_0057229 Ga0495622_0057229_498_1781 403
313 3300046660 Ga0495625_0136738 Ga0495625_0136738_166_1449 403
314 3300048929 Ga0496126_0083029 Ga0496126_0083029_637_1920 403
315 2162886011 MRS1b_contig_4645546 MRS1b_0353.00003280 404
316 3300005290 Ga0065712_10067823 Ga0065712_1006782319 404

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

23

345

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.9055 21 396
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8939 21 396
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8743 17 397
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8657 17 397
3wdo-assembly1.cif.gz_A structure of e. coli yajr transporter 0.8608 17 387
ID Description Score Start End Superfamily
af_P77389_5_379_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9669 21 390 1.20.1250.20
af_P9WJX7_21_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9615 21 202 1.20.1250.20
af_P77389_5_379_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9519 21 390 1.20.1250.20
af_Q8I2Z2_801_1011_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9209 17 194 1.20.1250.20
af_P0ADL1_13_393_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9202 21 387 1.20.1250.20
ID Description Score Start End GO Terms
AF-H6CRL4-F1-model_v4 deleted 0.9826 47 390
AF-A0A0N0XL78-F1-model_v4 Inner membrane transport protein YdhP 0.9759 17 390 GO:0005886
GO:0022857
AF-D5U7V7-F1-model_v4 Major facilitator superfamily MFS_1 0.9718 16 399 GO:0005886
GO:0022857
AF-A0A5N4EP21-F1-model_v4 MFS transporter 0.9699 12 399 GO:0005886
GO:0022857
AF-A0A4S8EW21-F1-model_v4 MFS transporter 0.9674 21 394 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
89.2 0.87 High
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Predicted Structure (AlphaFold2)

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