F404231

General Info

Members Datasets Scaffolds Average Seq Length
317 205 634 334

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10348654|Ga0307414_103486541
Length 365
Sequence MSSTTVATGTDAPRQPSGTAGRRGGPGFLAGPVGRNLGLVVALAVLCIVGAATAPDQFLTVDNVLTILRLAAVIGVVSIGMTFVIIGGGIDLSVGAIVALSSVWATTLATQAMAADFHWIVMVVTALLVGAGCGLVNGIVIAYGKLVAFIATLAMLAAARGLAEIIANRRTQIVQDRDFLAFFSGDVLGVPTLVVIFALVAVAGWVLLNRTTFGRRTFAVGGNAEAARLAGIRVQRHTMWLYVLSGVTCGIAAVMLMARTTTGSSTHGTLYELDAIAAVVIGGTLLIGGRGTIVGTVLGVLIFTTLGNVFTLNNLSSSAQAVARGVIIVVAVLLQMRLATGSFSLRRLGRGSDSGSPPTTDAPRA

Samples

Sample ID Description Type Environment
1 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
51 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
57 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
63 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
67 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
68 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
69 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
70 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
71 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
72 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
73 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
76 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
77 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
78 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
79 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
80 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
92 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
93 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
136 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
137 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
145 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
146 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
147 2643221546 Microbacterium sp. Root53 Isolate Unclassified
148 2643221566 Microbacterium sp. Root166 Isolate Unclassified
149 2643221597 Microbacterium sp. Root180 Isolate Unclassified
150 2643221613 Oerskovia sp. Root22 Isolate Unclassified
151 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
152 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
153 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
154 2643221721 Oerskovia sp. Root918 Isolate Unclassified
155 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
156 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
157 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
158 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
159 2687453737 Frankia sp. BMG5.36 Isolate Nodule
160 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
161 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
162 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
163 2773857759 Microbacterium sp. 1294 Isolate Unclassified
164 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
165 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
166 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
167 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
168 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
169 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
170 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
171 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
172 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
173 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
174 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
175 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
176 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
177 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
178 2881633906 Lactiplantibacillus garii FI11369 Isolate Unclassified
179 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
180 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
181 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
182 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
183 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
184 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
185 2919069694 Microbacterium sp. 1154 Isolate Unclassified
186 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
187 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
188 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
189 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
190 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
191 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
192 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
193 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
194 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
195 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
196 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
197 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
198 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
199 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
200 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
201 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
202 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
203 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
204 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
205 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.5
Metatranscriptomes 0
Isolates 20.5

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 6.31
Nodule 0.63
Rhizoplane 10.09
Rhizosphere 63.72
Stem 0
Stem Tuber 0
Unclassified 0.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307414_10348654 3300032004 Bacteria 1270
2 LJQas_1000143 3300000549 Bacteria 12620
3 JGI25406J46586_10005222 3300003203 Bacteria 6020
4 Ga0065714_10106299 3300005288 Bacteria 1551
5 Ga0070683_100112459 3300005329 Bacteria 2570
6 Ga0070680_100203270 3300005336 Bacteria 1671
7 Ga0070668_100027792 3300005347 Bacteria 4294
8 Ga0070668_100153147 3300005347 Bacteria 1866
9 Ga0070671_100144381 3300005355 Bacteria 2009
10 Ga0070667_100012184 3300005367 Bacteria 7116
11 Ga0070710_10083986 3300005437 Bacteria 1865
12 Ga0070663_100000090 3300005455 Bacteria 41066
13 Ga0070663_100071095 3300005455 Bacteria 2531
14 Ga0070679_100414947 3300005530 Bacteria 1292
15 Ga0070665_100237758 3300005548 Bacteria 1822
16 Ga0068862_100412195 3300005844 Bacteria 1266
17 Ga0081539_10000124 3300005985 Bacteria 180973
18 Ga0081539_10012492 3300005985 Bacteria 6541
19 Ga0081539_10034946 3300005985 Bacteria 3029
20 Ga0075365_10002235 3300006038 Bacteria 9365
21 Ga0075365_10254425 3300006038 Bacteria 1234
22 Ga0075364_10004032 3300006051 Bacteria 8428
23 Ga0075364_10037589 3300006051 Bacteria 3135
24 Ga0075367_10037513 3300006178 Bacteria 2817
25 Ga0075369_10001873 3300006186 Bacteria 7353
26 Ga0075370_10159353 3300006353 Bacteria 1324
27 Ga0075429_100203039 3300006880 Bacteria 1737
28 Ga0105245_10063772 3300009098 Bacteria 3328
29 Ga0105245_10079382 3300009098 Bacteria 2996
30 Ga0105245_10410540 3300009098 Bacteria 1355
31 Ga0114129_10281356 3300009147 Bacteria 2222
32 Ga0105243_10588990 3300009148 Bacteria 1069
33 Ga0105242_10291790 3300009176 Bacteria 1485
34 Ga0105242_10566873 3300009176 Bacteria 1091
35 Ga0105248_10158631 3300009177 Bacteria 2552
36 Ga0105249_10030748 3300009553 Bacteria 4854
37 Ga0105029_102101 3300009984 Bacteria 1279
38 Ga0105239_10368623 3300010375 Bacteria 1623
39 Ga0157370_10076589 3300013104 Bacteria 3151
40 Ga0171462_1004 3300013250 Bacteria 678877
41 Ga0163162_10078444 3300013306 Bacteria 3368
42 Ga0163162_10276380 3300013306 Bacteria 1812
43 Ga0157375_10109834 3300013308 Bacteria 2854
44 Ga0157375_10142584 3300013308 Bacteria 2524
45 Ga0163163_10235459 3300014325 Bacteria 1880
46 Ga0163163_10361110 3300014325 Bacteria 1509
47 Ga0157380_10035454 3300014326 Bacteria 3854
48 Ga0157380_10302788 3300014326 Bacteria 1473
49 Ga0207688_10060246 3300025901 Bacteria 2138
50 Ga0207662_10067768 3300025918 Bacteria 2153
51 Ga0207652_10058037 3300025921 Bacteria 3335
52 Ga0207652_10433069 3300025921 Bacteria 1186
53 Ga0207644_10242909 3300025931 Bacteria 1434
54 Ga0207669_10148060 3300025937 Bacteria 1640
55 Ga0207689_10026638 3300025942 Bacteria 4842
56 Ga0207712_10275076 3300025961 Bacteria 1372
57 Ga0207668_10067049 3300025972 Bacteria 2546
58 Ga0207668_10198640 3300025972 Bacteria 1595
59 Ga0207658_10043183 3300025986 Bacteria 3276
60 Ga0207658_10207927 3300025986 Bacteria 1638
61 Ga0207678_10000390 3300026067 Bacteria 39978
62 Ga0207674_10022382 3300026116 Bacteria 6787
63 Ga0207674_10128204 3300026116 Bacteria 2502
64 Ga0207683_10149798 3300026121 Bacteria 2105
65 Ga0268265_10393844 3300028380 Bacteria 1278
66 Ga0307515_10203532 3300028794 Bacteria 1847
67 Ga0307515_10226234 3300028794 Bacteria 1675
68 Ga0307513_10001613 3300031456 Bacteria 32387
69 Ga0307513_10008947 3300031456 Bacteria 12721
70 Ga0307513_10089465 3300031456 Bacteria 3143
71 Ga0307514_10002631 3300031649 Bacteria 18347
72 Ga0307405_10020767 3300031731 Bacteria 3677
73 Ga0307405_10066186 3300031731 Bacteria 2303
74 Ga0307405_10073804 3300031731 Bacteria 2204
75 Ga0307518_10005256 3300031838 Bacteria 9252
76 Ga0307410_10019247 3300031852 Bacteria 4148
77 Ga0307410_10056081 3300031852 Bacteria 2678
78 Ga0307410_10057536 3300031852 Bacteria 2648
79 Ga0307410_10063346 3300031852 Bacteria 2536
80 Ga0307410_10151592 3300031852 Bacteria 1727
81 Ga0307410_10179801 3300031852 Bacteria 1601
82 Ga0307410_10298712 3300031852 Bacteria 1270
83 Ga0307406_10070537 3300031901 Bacteria 2288
84 Ga0307406_10158415 3300031901 Bacteria 1624
85 Ga0307407_10023897 3300031903 Bacteria 3195
86 Ga0307407_10066724 3300031903 Bacteria 2123
87 Ga0307407_10137867 3300031903 Bacteria 1570
88 Ga0307412_10066526 3300031911 Bacteria 2443
89 Ga0307412_10090712 3300031911 Bacteria 2137
90 Ga0307409_100012370 3300031995 Bacteria 5436
91 Ga0307409_100021204 3300031995 Bacteria 4449
92 Ga0307409_100029026 3300031995 Bacteria 3952
93 Ga0307409_100046212 3300031995 Bacteria 3294
94 Ga0307409_100081472 3300031995 Bacteria 2616
95 Ga0307409_100117021 3300031995 Bacteria 2248
96 Ga0307409_100139234 3300031995 Bacteria 2088
97 Ga0307409_100161159 3300031995 Bacteria 1962
98 Ga0307409_100184957 3300031995 Bacteria 1848
99 Ga0307409_100259402 3300031995 Bacteria 1594
100 Ga0307409_100332225 3300031995 Bacteria 1427
101 Ga0307416_100031888 3300032002 Bacteria 3974
102 Ga0307416_100045284 3300032002 Bacteria 3463
103 Ga0307416_100047994 3300032002 Bacteria 3384
104 Ga0307416_100057410 3300032002 Bacteria 3149
105 Ga0307416_100062617 3300032002 Bacteria 3043
106 Ga0307416_100174147 3300032002 Bacteria 2008
107 Ga0307416_100248059 3300032002 Bacteria 1731
108 Ga0307416_100328443 3300032002 Bacteria 1536
109 Ga0307414_10046767 3300032004 Bacteria 2973
110 Ga0307414_10049521 3300032004 Bacteria 2906
111 Ga0307414_10107547 3300032004 Bacteria 2114
112 Ga0307411_10000275 3300032005 Bacteria 17018
113 Ga0307411_10224259 3300032005 Bacteria 1460
114 Ga0307415_100007328 3300032126 Bacteria 6026
115 Ga0307415_100028192 3300032126 Bacteria 3568
116 Ga0307415_100039649 3300032126 Bacteria 3115
117 Ga0307415_100070842 3300032126 Bacteria 2449
118 Ga0307415_100262594 3300032126 Bacteria 1410
119 Ga0307507_10019560 3300033179 Bacteria 7621
120 Ga0307507_10032104 3300033179 Bacteria 5492
121 Ga0307507_10051774 3300033179 Bacteria 3946
122 Ga0307510_10030596 3300033180 Bacteria 6100
123 Ga0395898_0003913 3300037466 Bacteria 16444
124 Ga0395901_0062383 3300038443 Bacteria 3879
125 Ga0395901_0145115 3300038443 Bacteria 2495
126 Ga0451789_0116312 3300041443 Bacteria 1508
127 Ga0451791_0089617 3300041451 Bacteria 4489
128 Ga0451793_0018765 3300041452 Bacteria 1843
129 Ga0451793_0067795 3300041452 Bacteria 3582
130 Ga0451797_0030670 3300041453 Bacteria 5293
131 Ga0451795_0144382 3300041456 Bacteria 1922
132 Ga0451795_0593722 3300041456 Bacteria 1462
133 Ga0451807_1618522 3300041486 Bacteria 1729
134 Ga0451807_2068624 3300041486 Bacteria 1837
135 Ga0451849_1567588 3300041505 Bacteria 1258
136 Ga0451843_1199858 3300041509 Bacteria 4738
137 Ga0451853_1947541 3300041512 Bacteria 2112
138 Ga0451853_2391345 3300041512 Bacteria 1339
139 Ga0439449_0094900 3300042007 Bacteria 1102
140 Ga0439458_0001914 3300042157 Bacteria 5154
141 Ga0439459_0019735 3300042438 Bacteria 1280
142 Ga0466972_0014939 3300044658 Bacteria 3884
143 Ga0466972_0097730 3300044658 Bacteria 1390
144 Ga0466965_0000006 3300044683 Bacteria 158069
145 Ga0466965_0081318 3300044683 Bacteria 1638
146 Ga0466965_0120028 3300044683 Bacteria 1357
147 Ga0466963_0068764 3300044694 Bacteria 2379
148 Ga0466963_0078124 3300044694 Bacteria 2237
149 Ga0466963_0171318 3300044694 Bacteria 1513
150 Ga0466968_0046137 3300044735 Bacteria 1851
151 Ga0466968_0085697 3300044735 Bacteria 1390
152 Ga0466970_0018291 3300044765 Bacteria 3626
153 Ga0466957_0042689 3300044842 Bacteria 2744
154 Ga0466960_0004762 3300044901 Bacteria 5332
155 Ga0466960_0011226 3300044901 Bacteria 3739
156 Ga0466960_0030280 3300044901 Bacteria 2490
157 Ga0466960_0039416 3300044901 Bacteria 2228
158 Ga0466960_0042866 3300044901 Bacteria 2150
159 Ga0466959_0102992 3300045049 Bacteria 2042
160 Ga0466967_0390463 3300045976 Bacteria 1353
161 Ga0495638_0173385 3300046460 Bacteria 1236
162 Ga0495641_0078468 3300046461 Bacteria 1480
163 Ga0495653_0177268 3300046463 Bacteria 1466
164 Ga0495650_0086609 3300046471 Bacteria 1199
165 Ga0495644_0032394 3300046523 Bacteria 1975
166 Ga0495672_0027262 3300047320 Bacteria 3632
167 Ga0495672_0051181 3300047320 Bacteria 2434
168 Ga0495614_0055392 3300048089 Bacteria 1701
169 Ga0496100_0127494 3300048903 Bacteria 1788
170 Ga0496101_0206412 3300048904 Bacteria 1521
171 Ga0496102_0021845 3300048905 Bacteria 5664
172 Ga0496104_0112342 3300048907 Bacteria 2613
173 Ga0496105_0005761 3300048908 Bacteria 9442
174 Ga0496105_0265192 3300048908 Bacteria 1388
175 Ga0496105_0442402 3300048908 Bacteria 1027
176 Ga0496108_0009691 3300048911 Bacteria 7804
177 Ga0496108_0054431 3300048911 Bacteria 3358
178 Ga0496108_0095475 3300048911 Bacteria 2531
179 Ga0496108_0353148 3300048911 Bacteria 1283
180 Ga0496109_0002599 3300048912 Bacteria 15128
181 Ga0496109_0151268 3300048912 Bacteria 2173
182 Ga0496109_0460455 3300048912 Bacteria 1201
183 Ga0496110_0008361 3300048913 Bacteria 8323
184 Ga0496110_0161430 3300048913 Bacteria 2032
185 Ga0496111_0000596 3300048914 Bacteria 19029
186 Ga0496111_0007283 3300048914 Bacteria 7241
187 Ga0496111_0111279 3300048914 Bacteria 2017
188 Ga0496114_0103349 3300048917 Bacteria 2435
189 Ga0496114_0252621 3300048917 Bacteria 1551
190 Ga0496114_0381608 3300048917 Bacteria 1248
191 Ga0496115_0177016 3300048918 Bacteria 1764
192 Ga0496117_0001060 3300048920 Bacteria 41966
193 Ga0496117_0011609 3300048920 Bacteria 7873
194 Ga0496118_0171438 3300048921 Bacteria 1325
195 Ga0496122_0000846 3300048925 Bacteria 57849
196 Ga0496122_0029643 3300048925 Bacteria 4608
197 Ga0496123_0009262 3300048926 Bacteria 8896
198 Ga0496123_0115741 3300048926 Bacteria 1520
199 Ga0496123_0140697 3300048926 Bacteria 1320
200 Ga0496124_0157368 3300048927 Bacteria 1775
201 Ga0496126_0148652 3300048929 Bacteria 2010
202 Ga0501031_0015971 3300049568 Bacteria 4875
203 Ga0501033_0011536 3300049570 Bacteria 6761
204 Ga0501033_0178329 3300049570 Bacteria 1524
205 Ga0501034_0007568 3300049571 Bacteria 11556
206 Ga0501034_0057569 3300049571 Bacteria 3907
207 Ga0501036_0022750 3300049572 Bacteria 5277
208 Ga0501036_0307554 3300049572 Bacteria 1325
209 Ga0501037_0071413 3300049573 Bacteria 2525
210 Ga0501038_0005920 3300049574 Bacteria 11301
211 Ga0501038_0041412 3300049574 Bacteria 4017
212 Ga0501038_0067135 3300049574 Bacteria 3052
213 Ga0501038_0254580 3300049574 Bacteria 1390
214 Ga0501039_0028965 3300049575 Bacteria 4265
215 Ga0501039_0098417 3300049575 Bacteria 2282
216 Ga0501039_0189568 3300049575 Bacteria 1617
217 Ga0501040_0155127 3300049576 Bacteria 1617
218 Ga0501041_0134127 3300049577 Bacteria 1543
219 Ga0501042_0008015 3300049578 Bacteria 6951
220 Ga0501043_0009821 3300049579 Bacteria 7502
221 Ga0501043_0015485 3300049579 Bacteria 5974
222 Ga0501047_0063884 3300049581 Bacteria 3551
223 Ga0501047_0137768 3300049581 Bacteria 2320
224 Ga0501048_0005798 3300049582 Bacteria 9391
225 Ga0501070_0000810 3300049586 Bacteria 28411
226 Ga0501070_0003038 3300049586 Bacteria 14613
227 Ga0501070_0049231 3300049586 Bacteria 3500
228 Ga0501070_0205437 3300049586 Bacteria 1617
229 Ga0501071_0270408 3300049587 Bacteria 1285
230 Ga0501073_0000012 3300049589 Bacteria 161319
231 Ga0501261_006873 3300049690 Unclassified 1455
232 Ga0501080_0000025 3300049742 Bacteria 89908
233 Ga0501083_0022860 3300049744 Bacteria 4339
234 Ga0501044_0003918 3300049823 Bacteria 16685
235 Ga0501044_0016132 3300049823 Bacteria 8030
236 nmdc:mga00v17_22469_c1 3300050491 Bacteria 3639
237 nmdc:mga0yw44_2759_c1 3300050492 Bacteria 7600
238 nmdc:mga0yw44_55678_c1 3300050492 Bacteria 2407
239 nmdc:mga0yw44_8522_c1 3300050492 Bacteria 5116
240 nmdc:mga09592_289804_c1 3300050508 Bacteria 1419
241 nmdc:mga08y16_87276_c1 3300050511 Bacteria 3250
242 Ga0500644_0034318 3300053088 Bacteria 1636
243 Ga0500562_030107 3300053108 Bacteria 1429
244 Ga0500652_119038 3300053131 Bacteria 1104
245 Ga0500568_0000664 3300053139 Bacteria 24869
246 Ga0500573_0041487 3300053140 Bacteria 2657
247 Ga0500573_0075100 3300053140 Bacteria 1924
248 Ga0500604_0074046 3300053151 Bacteria 1091
249 Ga0500616_0000113 3300053153 Bacteria 150722
250 Ga0500616_0002007 3300053153 Bacteria 18019
251 Ga0501084_0183578 3300054114 Bacteria 1766
252 Ga0466962_0064960 3300061719 Bacteria 1742
253 2555230632 2554235227 Bacteria 3637389
254 2586063812 2585427649 Bacteria 9053857
255 2588107339 2585428157 Bacteria 3018951
256 2643751805 2643221546 Bacteria 2910897
257 2643846535 2643221566 Bacteria 3460379
258 2643996645 2643221597 Bacteria 3347721
259 2644083486 2643221613 Bacteria 4622396
260 2644457932 2643221681 Bacteria 3707866
261 2644506754 2643221690 Bacteria 4654705
262 2644527745 2643221694 Bacteria 4392972
263 2644664319 2643221721 Bacteria 4486924
264 2644670634 2643221722 Bacteria 4247614
265 2645722794 2643221961 Bacteria 3919167
266 2645725757 2643221962 Bacteria 3874254
267 2655031985 2654587600 Bacteria 3911798
268 2689960886 2687453737 Bacteria 11203906
269 2689996122 2687453743 Bacteria 8361025
270 2753071656 2751185734 Bacteria 8863695
271 2753076436 2751185734 Bacteria 8863695
272 2774379823 2773857758 Bacteria 3592392
273 2774383145 2773857759 Bacteria 2963774
274 2774397740 2773857763 Bacteria 4180068
275 2791915104 2791354901 Bacteria 8322202
276 2808629752 2808606306 Bacteria 3608896
277 2808630218 2808606306 Bacteria 3608896
278 2809228205 2808606447 Bacteria 3572005
279 2809586938 2808606522 Bacteria 9488490
280 2812324965 2811994872 Bacteria 4121241
281 2816510678 2816332139 Bacteria 9138787
282 2844853156 2844852863 Bacteria 3849151
283 2852634916 2852632344 Bacteria 3463163
284 2852648168 2852646457 Bacteria 3408613
285 2852678117 2852677369 Bacteria 3768884
286 2857737662 2857737099 Bacteria 3104305
287 2866617101 2866612099 Bacteria 7543886
288 2870722898 2870721527 Bacteria 9689237
289 2870723219 2870721527 Bacteria 9689237
290 2881635906 2881633906 Bacteria 2972201
291 2891329033 2891326441 Bacteria 6439512
292 2899363568 2899359706 Bacteria 10940472
293 2904512605 2904509784 Bacteria 3520416
294 2905930659 2905926851 Bacteria 4423176
295 2908679145 2908678064 Bacteria 3482747
296 2915772121 2915768154 Bacteria 8424322
297 2919069787 2919069694 Bacteria 3622919
298 2919444520 2919443155 Bacteria 4072969
299 2935412048 2935409751 Bacteria 4179611
300 2935892919 2935890801 Bacteria 4593001
301 2939659540 2939657138 Bacteria 3740283
302 2939662135 2939660829 Bacteria 3784848
303 2945970189 2945968032 Bacteria 4111363
304 2946035257 2946033335 Bacteria 3835514
305 2977229353 2977228692 Bacteria 3450105
306 2977238603 2977236895 Bacteria 3569373
307 2977264531 2977264416 Bacteria 3750737
308 2984543615 2984542743 Bacteria 3569378
309 3002999684 3002998708 Bacteria 11715108
310 8003318918 8003314358 Bacteria 10575343
311 8004215338 8004212874 Bacteria 2861420
312 8046355178 8046352972 Bacteria 3613806
313 8047710964 8047710418 Bacteria 11023148
314 8054475485 8054472261 Bacteria 7464355
315 8055034812 8055034563 Bacteria 3562128
316 8056038431 8056037122 Bacteria 3854319
317 8057347642 8057345674 Bacteria 4160394
318 Ga0307414_10348654
319 LJQas_1000143
320 JGI25406J46586_10005222
321 Ga0065714_10106299
322 Ga0070683_100112459
323 Ga0070680_100203270
324 Ga0070668_100027792
325 Ga0070668_100153147
326 Ga0070671_100144381
327 Ga0070667_100012184
328 Ga0070710_10083986
329 Ga0070663_100000090
330 Ga0070663_100071095
331 Ga0070679_100414947
332 Ga0070665_100237758
333 Ga0068862_100412195
334 Ga0081539_10000124
335 Ga0081539_10012492
336 Ga0081539_10034946
337 Ga0075365_10002235
338 Ga0075365_10254425
339 Ga0075364_10004032
340 Ga0075364_10037589
341 Ga0075367_10037513
342 Ga0075369_10001873
343 Ga0075370_10159353
344 Ga0075429_100203039
345 Ga0105245_10063772
346 Ga0105245_10079382
347 Ga0105245_10410540
348 Ga0114129_10281356
349 Ga0105243_10588990
350 Ga0105242_10291790
351 Ga0105242_10566873
352 Ga0105248_10158631
353 Ga0105249_10030748
354 Ga0105029_102101
355 Ga0105239_10368623
356 Ga0157370_10076589
357 Ga0171462_1004
358 Ga0163162_10078444
359 Ga0163162_10276380
360 Ga0157375_10109834
361 Ga0157375_10142584
362 Ga0163163_10235459
363 Ga0163163_10361110
364 Ga0157380_10035454
365 Ga0157380_10302788
366 Ga0207688_10060246
367 Ga0207662_10067768
368 Ga0207652_10058037
369 Ga0207652_10433069
370 Ga0207644_10242909
371 Ga0207669_10148060
372 Ga0207689_10026638
373 Ga0207712_10275076
374 Ga0207668_10067049
375 Ga0207668_10198640
376 Ga0207658_10043183
377 Ga0207658_10207927
378 Ga0207678_10000390
379 Ga0207674_10022382
380 Ga0207674_10128204
381 Ga0207683_10149798
382 Ga0268265_10393844
383 Ga0307515_10203532
384 Ga0307515_10226234
385 Ga0307513_10001613
386 Ga0307513_10008947
387 Ga0307513_10089465
388 Ga0307514_10002631
389 Ga0307405_10020767
390 Ga0307405_10066186
391 Ga0307405_10073804
392 Ga0307518_10005256
393 Ga0307410_10019247
394 Ga0307410_10056081
395 Ga0307410_10057536
396 Ga0307410_10063346
397 Ga0307410_10151592
398 Ga0307410_10179801
399 Ga0307410_10298712
400 Ga0307406_10070537
401 Ga0307406_10158415
402 Ga0307407_10023897
403 Ga0307407_10066724
404 Ga0307407_10137867
405 Ga0307412_10066526
406 Ga0307412_10090712
407 Ga0307409_100012370
408 Ga0307409_100021204
409 Ga0307409_100029026
410 Ga0307409_100046212
411 Ga0307409_100081472
412 Ga0307409_100117021
413 Ga0307409_100139234
414 Ga0307409_100161159
415 Ga0307409_100184957
416 Ga0307409_100259402
417 Ga0307409_100332225
418 Ga0307416_100031888
419 Ga0307416_100045284
420 Ga0307416_100047994
421 Ga0307416_100057410
422 Ga0307416_100062617
423 Ga0307416_100174147
424 Ga0307416_100248059
425 Ga0307416_100328443
426 Ga0307414_10046767
427 Ga0307414_10049521
428 Ga0307414_10107547
429 Ga0307411_10000275
430 Ga0307411_10224259
431 Ga0307415_100007328
432 Ga0307415_100028192
433 Ga0307415_100039649
434 Ga0307415_100070842
435 Ga0307415_100262594
436 Ga0307507_10019560
437 Ga0307507_10032104
438 Ga0307507_10051774
439 Ga0307510_10030596
440 Ga0395898_0003913
441 Ga0395901_0062383
442 Ga0395901_0145115
443 Ga0451789_0116312
444 Ga0451791_0089617
445 Ga0451793_0018765
446 Ga0451793_0067795
447 Ga0451797_0030670
448 Ga0451795_0144382
449 Ga0451795_0593722
450 Ga0451807_1618522
451 Ga0451807_2068624
452 Ga0451849_1567588
453 Ga0451843_1199858
454 Ga0451853_1947541
455 Ga0451853_2391345
456 Ga0439449_0094900
457 Ga0439458_0001914
458 Ga0439459_0019735
459 Ga0466972_0014939
460 Ga0466972_0097730
461 Ga0466965_0000006
462 Ga0466965_0081318
463 Ga0466965_0120028
464 Ga0466963_0068764
465 Ga0466963_0078124
466 Ga0466963_0171318
467 Ga0466968_0046137
468 Ga0466968_0085697
469 Ga0466970_0018291
470 Ga0466957_0042689
471 Ga0466960_0004762
472 Ga0466960_0011226
473 Ga0466960_0030280
474 Ga0466960_0039416
475 Ga0466960_0042866
476 Ga0466959_0102992
477 Ga0466967_0390463
478 Ga0495638_0173385
479 Ga0495641_0078468
480 Ga0495653_0177268
481 Ga0495650_0086609
482 Ga0495644_0032394
483 Ga0495672_0027262
484 Ga0495672_0051181
485 Ga0495614_0055392
486 Ga0496100_0127494
487 Ga0496101_0206412
488 Ga0496102_0021845
489 Ga0496104_0112342
490 Ga0496105_0005761
491 Ga0496105_0265192
492 Ga0496105_0442402
493 Ga0496108_0009691
494 Ga0496108_0054431
495 Ga0496108_0095475
496 Ga0496108_0353148
497 Ga0496109_0002599
498 Ga0496109_0151268
499 Ga0496109_0460455
500 Ga0496110_0008361
501 Ga0496110_0161430
502 Ga0496111_0000596
503 Ga0496111_0007283
504 Ga0496111_0111279
505 Ga0496114_0103349
506 Ga0496114_0252621
507 Ga0496114_0381608
508 Ga0496115_0177016
509 Ga0496117_0001060
510 Ga0496117_0011609
511 Ga0496118_0171438
512 Ga0496122_0000846
513 Ga0496122_0029643
514 Ga0496123_0009262
515 Ga0496123_0115741
516 Ga0496123_0140697
517 Ga0496124_0157368
518 Ga0496126_0148652
519 Ga0501031_0015971
520 Ga0501033_0011536
521 Ga0501033_0178329
522 Ga0501034_0007568
523 Ga0501034_0057569
524 Ga0501036_0022750
525 Ga0501036_0307554
526 Ga0501037_0071413
527 Ga0501038_0005920
528 Ga0501038_0041412
529 Ga0501038_0067135
530 Ga0501038_0254580
531 Ga0501039_0028965
532 Ga0501039_0098417
533 Ga0501039_0189568
534 Ga0501040_0155127
535 Ga0501041_0134127
536 Ga0501042_0008015
537 Ga0501043_0009821
538 Ga0501043_0015485
539 Ga0501047_0063884
540 Ga0501047_0137768
541 Ga0501048_0005798
542 Ga0501070_0000810
543 Ga0501070_0003038
544 Ga0501070_0049231
545 Ga0501070_0205437
546 Ga0501071_0270408
547 Ga0501073_0000012
548 Ga0501261_006873
549 Ga0501080_0000025
550 Ga0501083_0022860
551 Ga0501044_0003918
552 Ga0501044_0016132
553 nmdc:mga00v17_22469_c1
554 nmdc:mga0yw44_2759_c1
555 nmdc:mga0yw44_55678_c1
556 nmdc:mga0yw44_8522_c1
557 nmdc:mga09592_289804_c1
558 nmdc:mga08y16_87276_c1
559 Ga0500644_0034318
560 Ga0500562_030107
561 Ga0500652_119038
562 Ga0500568_0000664
563 Ga0500573_0041487
564 Ga0500573_0075100
565 Ga0500604_0074046
566 Ga0500616_0000113
567 Ga0500616_0002007
568 Ga0501084_0183578
569 Ga0466962_0064960
570 2555230632
571 2586063812
572 2588107339
573 2643751805
574 2643846535
575 2643996645
576 2644083486
577 2644457932
578 2644506754
579 2644527745
580 2644664319
581 2644670634
582 2645722794
583 2645725757
584 2655031985
585 2689960886
586 2689996122
587 2753071656
588 2753076436
589 2774379823
590 2774383145
591 2774397740
592 2791915104
593 2808629752
594 2808630218
595 2809228205
596 2809586938
597 2812324965
598 2816510678
599 2844853156
600 2852634916
601 2852648168
602 2852678117
603 2857737662
604 2866617101
605 2870722898
606 2870723219
607 2881635906
608 2891329033
609 2899363568
610 2904512605
611 2905930659
612 2908679145
613 2915772121
614 2919069787
615 2919444520
616 2935412048
617 2935892919
618 2939659540
619 2939662135
620 2945970189
621 2946035257
622 2977229353
623 2977238603
624 2977264531
625 2984543615
626 3002999684
627 8003318918
628 8004215338
629 8046355178
630 8047710964
631 8054475485
632 8055034812
633 8056038431
634 8057347642

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

63

334

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.5948 66 303
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5937 49 310
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.5758 36 305
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5659 49 310
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.5564 66 303
ID Description Score Start End Superfamily
af_P0AGI4_56_383_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8481 65 304 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8413 65 304 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8351 65 304 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8336 65 304 1.10.3470.10
af_P37772_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8126 66 303 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A6N7YZG5-F1-model_v4 ABC transporter permease 0.8908 45 314 GO:0005886
GO:0022857
AF-A0A1H2A143-F1-model_v4 Monosaccharide ABC transporter membrane protein, CUT2 family 0.8835 27 314 GO:0005886
GO:0022857
AF-A0A511JC31-F1-model_v4 Sugar ABC transporter permease 0.8804 31 313 GO:0005886
GO:0022857
AF-A0A4R2CR61-F1-model_v4 Ribose transport system permease protein 0.8802 24 315 GO:0005886
GO:0022857
AF-A0A101KXJ0-F1-model_v4 Sugar ABC transporter permease 0.8795 40 313 GO:0005886
GO:0022857

Map