F404306

General Info

Members Datasets Scaffolds Average Seq Length
317 185 634 401

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0002966|Ga0495625_0002966_7713_9029
Length 438
Sequence LIAWWRIRPWPNGSPKRWSKKKSCPTIEPQMKIYVVGGAVRDELLGLPVQDHDYVVVGATPEDMLAQGFRPVGKDFPVFLHPDTQEEYALARTERKTAPGYKGFVFHTDSAVTLEQDLARRDLTINAIAKSEDGVLVDPYDGQGDIGKRVFRHVSDAFIEDPVRILRLARFAARFPDFTVAPETNALMQKMVAAGEVDALVPERVWQELARGMMEQTPSRMFNVLRDCGALARILPELDALWGVPQPAKYHPEIDTGVHVMMVLDYAAGRGYSLGVRFAALMHDLGKGTTPPDLWPSHHGHEGRSVELVQGICDRLKVPNDCRDVAVITAREHGNVGRAFELRPATIVNLLARCDGFRKPARFHDMLQASECDRRGRTGFEDVAFPQLDYLMGALKAAQGVDAGAIAAKFKEQPQRIPEAIVAARTEAVAEYAANAAN

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
12 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
30 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
31 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
32 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
38 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
40 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
41 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
42 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
61 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
62 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
75 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
78 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
82 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
83 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
84 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
85 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
86 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
87 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
88 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
106 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
107 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
135 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
140 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
168 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
169 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
170 2734482258 Glomeribacter sp. phylotype 3 Isolate Unclassified
171 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
172 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
173 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
174 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
175 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
176 2818991436 Collimonas arenae 515 Isolate Unclassified
177 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
178 2821131069 Duganella sp. 1224 Isolate Unclassified
179 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
180 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
181 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
182 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
183 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
184 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
185 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.32
Metatranscriptomes 0
Isolates 5.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.26
Nodule 0.95
Rhizoplane 4.42
Rhizosphere 76.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0002966 3300046660 Bacteria 17641
2 JGI25155J39150_1000249 3300002704 Bacteria 20726
3 JGI25155J39150_1000328 3300002704 Bacteria 15729
4 JGI25156J39149_1000117 3300002705 Bacteria 57700
5 JGI25162J39368_1000148 3300002737 Bacteria 76611
6 JGI25154J39366_1000107 3300002738 Bacteria 73482
7 JGI25154J39366_1000440 3300002738 Bacteria 22091
8 JGI25157J39369_1000884 3300002741 Bacteria 14427
9 JGI25165J46597_1000030 3300003214 Bacteria 305254
10 Ga0055538_1000017 3300003751 Bacteria 305254
11 Ga0055539_1000022 3300003752 Bacteria 305254
12 Ga0055533_1000030 3300003756 Bacteria 305254
13 Ga0055532_1000044 3300003758 Bacteria 191110
14 Ga0055525_1000034 3300003759 Bacteria 305254
15 Ga0055535_1004355 3300003761 Bacteria 3470
16 Ga0055541_1000015 3300003841 Bacteria 305254
17 Ga0070658_10012833 3300005327 Bacteria 6723
18 Ga0070680_100092226 3300005336 Bacteria 2508
19 Ga0070682_100015436 3300005337 Bacteria 4426
20 Ga0070678_100212743 3300005456 Bacteria 1603
21 Ga0068855_100054306 3300005563 Bacteria 4708
22 Ga0068858_100000730 3300005842 Bacteria 34410
23 Ga0105251_10020002 3300009011 Bacteria 3523
24 Ga0105244_10000573 3300009036 Bacteria 32996
25 Ga0105240_10015068 3300009093 Bacteria 10523
26 Ga0105241_10008195 3300009174 Bacteria 7691
27 Ga0105241_10238484 3300009174 Bacteria 1536
28 Ga0105242_10002628 3300009176 Bacteria 14086
29 Ga0157380_10003160 3300014326 Bacteria 11249
30 Ga0182008_10012455 3300014497 Bacteria 4490
31 Ga0182008_10021653 3300014497 Bacteria 3301
32 Ga0157379_10110110 3300014968 Bacteria 2474
33 Ga0182005_1000142 3300015265 Bacteria 50650
34 Ga0213872_10004144 3300021361 Bacteria 7793
35 Ga0209435_100004 3300025206 Bacteria 633417
36 Ga0209435_100215 3300025206 Bacteria 16415
37 Ga0209784_100034 3300025224 Bacteria 305504
38 Ga0209566_100038 3300025225 Bacteria 305504
39 Ga0209674_100056 3300025226 Bacteria 305504
40 Ga0209147_100011 3300025229 Bacteria 702140
41 Ga0209563_100057 3300025230 Bacteria 305604
42 Ga0209437_100071 3300025233 Bacteria 305604
43 Ga0209437_100393 3300025233 Bacteria 42190
44 Ga0209258_100528 3300025242 Bacteria 36442
45 Ga0207425_1001711 3300025245 Bacteria 8707
46 Ga0209646_1000149 3300025246 Bacteria 100004
47 Ga0209646_1000191 3300025246 Bacteria 75546
48 Ga0209646_1000233 3300025246 Bacteria 57776
49 Ga0209026_1000066 3300025250 Bacteria 207691
50 Ga0209026_1003369 3300025250 Bacteria 5293
51 Ga0209677_100035 3300025253 Bacteria 305504
52 Ga0209759_1000072 3300025256 Bacteria 178206
53 Ga0209759_1000182 3300025256 Bacteria 102836
54 Ga0209233_1000094 3300025261 Bacteria 305604
55 Ga0209025_1001479 3300025294 Bacteria 30558
56 Ga0209758_1001578 3300025297 Bacteria 26056
57 Ga0207655_1003118 3300025728 Bacteria 12571
58 Ga0207713_1059539 3300025735 Bacteria 1465
59 Ga0207654_10003785 3300025911 Bacteria 7627
60 Ga0207695_10002079 3300025913 Bacteria 30518
61 Ga0207695_10189686 3300025913 Bacteria 1973
62 Ga0207660_10078892 3300025917 Bacteria 2414
63 Ga0207652_10307604 3300025921 Bacteria 1431
64 Ga0207694_10060133 3300025924 Bacteria 2957
65 Ga0207686_10002028 3300025934 Bacteria 11173
66 Ga0207667_10034970 3300025949 Bacteria 5393
67 Ga0207703_10004391 3300026035 Bacteria 11592
68 Ga0265327_10008719 3300031251 Bacteria 7496
69 Ga0307408_100201295 3300031548 Bacteria 1612
70 Ga0307408_100350187 3300031548 Bacteria 1253
71 Ga0316579_10015479 3300031691 Bacteria 3313
72 Ga0373929_0011072 3300035085 Bacteria 1694
73 Ga0373939_0018680 3300035114 Bacteria 1861
74 Ga0316582_0005719 3300036647 Bacteria 6447
75 Ga0316582_0120156 3300036647 Bacteria 1757
76 Ga0316584_0149857 3300036712 Bacteria 1737
77 Ga0395899_0008638 3300037312 Bacteria 7836
78 Ga0395899_0200029 3300037312 Bacteria 1394
79 Ga0395900_0013435 3300037418 Bacteria 8367
80 Ga0395900_0019939 3300037418 Bacteria 6835
81 Ga0395900_0162854 3300037418 Bacteria 2274
82 Ga0395900_0278312 3300037418 Bacteria 1666
83 Ga0395898_0026072 3300037466 Bacteria 5885
84 Ga0395898_0068829 3300037466 Bacteria 3425
85 Ga0395898_0074037 3300037466 Bacteria 3290
86 Ga0395905_0022063 3300037471 Bacteria 6022
87 Ga0395905_0036181 3300037471 Bacteria 4636
88 Ga0395905_0243410 3300037471 Bacteria 1680
89 Ga0395901_0000284 3300038443 Bacteria 62845
90 Ga0395901_0003656 3300038443 Bacteria 15505
91 Ga0395901_0094236 3300038443 Bacteria 3136
92 Ga0436361_0665206 3300039447 Bacteria 10628
93 Ga0450904_000559 3300042139 Bacteria 7012
94 Ga0466966_0013156 3300044684 Bacteria 5480
95 Ga0466957_0000028 3300044842 Bacteria 53151
96 Ga0466957_0015348 3300044842 Bacteria 4475
97 Ga0466957_0084540 3300044842 Bacteria 1981
98 Ga0451576_0032332 3300045051 Bacteria 5573
99 Ga0495617_000017 3300046452 Bacteria 253066
100 Ga0495617_014485 3300046452 Bacteria 2679
101 Ga0495627_000837 3300046453 Bacteria 22173
102 Ga0495627_029217 3300046453 Bacteria 1755
103 Ga0495592_0044762 3300046454 Bacteria 3305
104 Ga0495590_0004273 3300046457 Bacteria 5772
105 Ga0495590_0006292 3300046457 Bacteria 4646
106 Ga0495590_0019837 3300046457 Bacteria 2392
107 Ga0495591_004310 3300046458 Bacteria 7012
108 Ga0495638_0000408 3300046460 Bacteria 52490
109 Ga0495653_0000056 3300046463 Bacteria 100732
110 Ga0495653_0005041 3300046463 Bacteria 10719
111 Ga0495650_0000283 3300046471 Bacteria 96503
112 Ga0495580_0016106 3300046472 Bacteria 5619
113 Ga0495605_0000969 3300046474 Bacteria 19529
114 Ga0495605_0002733 3300046474 Bacteria 10772
115 Ga0495605_0038648 3300046474 Bacteria 2393
116 Ga0495584_0001029 3300046491 Bacteria 17393
117 Ga0495584_0005174 3300046491 Bacteria 6924
118 Ga0495584_0015270 3300046491 Bacteria 3912
119 Ga0495584_0020020 3300046491 Bacteria 3399
120 Ga0495585_0003165 3300046492 Bacteria 11264
121 Ga0495585_0006895 3300046492 Bacteria 6999
122 Ga0495596_0002558 3300046500 Bacteria 9681
123 Ga0495596_0006106 3300046500 Bacteria 5601
124 Ga0495596_0013469 3300046500 Bacteria 3469
125 Ga0495596_0019226 3300046500 Bacteria 2808
126 Ga0495607_0001973 3300046501 Bacteria 17294
127 Ga0495607_0004700 3300046501 Bacteria 9993
128 Ga0495607_0142760 3300046501 Bacteria 1233
129 Ga0495583_0000137 3300046506 Bacteria 123815
130 Ga0495583_0000231 3300046506 Bacteria 93091
131 Ga0495583_0005301 3300046506 Bacteria 8810
132 Ga0495583_0006704 3300046506 Bacteria 7460
133 Ga0495583_0023321 3300046506 Bacteria 3134
134 Ga0495606_0045739 3300046507 Bacteria 2898
135 Ga0495610_0045400 3300046512 Bacteria 2174
136 Ga0495616_0000724 3300046513 Bacteria 24371
137 Ga0495616_0008215 3300046513 Bacteria 6197
138 Ga0495616_0036954 3300046513 Bacteria 2516
139 Ga0495628_0003718 3300046516 Bacteria 13583
140 Ga0495630_0014626 3300046517 Bacteria 5719
141 Ga0495631_0005580 3300046518 Bacteria 6577
142 Ga0495631_0008394 3300046518 Bacteria 5205
143 Ga0495631_0014814 3300046518 Bacteria 3754
144 Ga0495631_0028940 3300046518 Bacteria 2524
145 Ga0495632_0028701 3300046519 Bacteria 2902
146 Ga0495637_0039628 3300046520 Bacteria 2032
147 Ga0495643_0000108 3300046522 Bacteria 136032
148 Ga0495643_0002706 3300046522 Bacteria 13654
149 Ga0495644_0006626 3300046523 Bacteria 4487
150 Ga0495644_0017888 3300046523 Bacteria 2707
151 Ga0495644_0023718 3300046523 Bacteria 2334
152 Ga0495644_0033358 3300046523 Bacteria 1945
153 Ga0495648_0000464 3300046524 Bacteria 43552
154 Ga0495648_0000669 3300046524 Bacteria 36637
155 Ga0495648_0026428 3300046524 Bacteria 3908
156 Ga0495648_0048216 3300046524 Bacteria 2625
157 Ga0495648_0126597 3300046524 Bacteria 1364
158 Ga0495666_0005815 3300046526 Bacteria 6219
159 Ga0495642_0000052 3300046528 Bacteria 70857
160 Ga0495642_0004912 3300046528 Bacteria 5158
161 Ga0495642_0018931 3300046528 Bacteria 2696
162 Ga0495642_0025490 3300046528 Bacteria 2344
163 Ga0495642_0038596 3300046528 Bacteria 1935
164 Ga0495652_0014677 3300046529 Bacteria 7024
165 Ga0495654_0011391 3300046530 Bacteria 4814
166 Ga0495654_0021953 3300046530 Bacteria 3319
167 Ga0495654_0048830 3300046530 Bacteria 2075
168 Ga0495665_0005204 3300046531 Bacteria 7012
169 Ga0495665_0032612 3300046531 Bacteria 2786
170 Ga0495586_0004559 3300046535 Bacteria 7405
171 Ga0495609_0001957 3300046538 Bacteria 13084
172 Ga0495609_0005929 3300046538 Bacteria 6315
173 Ga0495609_0011061 3300046538 Bacteria 4309
174 Ga0495597_0000997 3300046542 Bacteria 21707
175 Ga0495597_0002711 3300046542 Bacteria 10925
176 Ga0495597_0003113 3300046542 Bacteria 9956
177 Ga0495645_0040522 3300046543 Bacteria 3398
178 Ga0495622_0001357 3300046557 Bacteria 12511
179 Ga0495622_0014039 3300046557 Bacteria 3717
180 Ga0495633_0003582 3300046558 Bacteria 10273
181 Ga0495633_0004799 3300046558 Bacteria 8476
182 Ga0495633_0009103 3300046558 Bacteria 5514
183 Ga0495633_0075749 3300046558 Bacteria 1567
184 Ga0495656_0016408 3300046615 Bacteria 2809
185 Ga0495668_0000611 3300046616 Bacteria 43129
186 Ga0495668_0005546 3300046616 Bacteria 8502
187 Ga0495668_0098777 3300046616 Bacteria 1597
188 Ga0495634_0012376 3300046642 Bacteria 6177
189 Ga0495611_0007583 3300046648 Bacteria 4603
190 Ga0495611_0008307 3300046648 Bacteria 4397
191 Ga0495611_0058806 3300046648 Bacteria 1744
192 Ga0495611_0085374 3300046648 Bacteria 1455
193 Ga0495625_0028953 3300046660 Bacteria 4146
194 Ga0495625_0157131 3300046660 Bacteria 1525
195 Ga0495635_0004426 3300046663 Bacteria 9732
196 Ga0495659_0000552 3300046664 Bacteria 13839
197 Ga0495661_0000953 3300046665 Bacteria 26274
198 Ga0495661_0002977 3300046665 Bacteria 12781
199 Ga0495661_0003902 3300046665 Bacteria 10887
200 Ga0495661_0032082 3300046665 Bacteria 3324
201 Ga0495588_0005339 3300046674 Bacteria 5714
202 Ga0495588_0007355 3300046674 Bacteria 5006
203 Ga0495588_0060576 3300046674 Bacteria 1959
204 Ga0495623_0013583 3300046679 Bacteria 5279
205 Ga0495623_0082795 3300046679 Bacteria 1983
206 Ga0495669_0000142 3300046684 Bacteria 45458
207 Ga0495669_0005067 3300046684 Bacteria 5478
208 Ga0495613_0023713 3300046689 Bacteria 4573
209 Ga0495613_0049635 3300046689 Bacteria 3096
210 Ga0495624_0014226 3300046690 Bacteria 5405
211 Ga0495670_0000621 3300046691 Bacteria 16985
212 Ga0495670_0000692 3300046691 Bacteria 16035
213 Ga0495670_0003531 3300046691 Bacteria 7678
214 Ga0495670_0010622 3300046691 Bacteria 4524
215 Ga0495670_0062800 3300046691 Bacteria 1869
216 Ga0495670_0066193 3300046691 Bacteria 1822
217 Ga0495670_0099246 3300046691 Bacteria 1498
218 Ga0495671_0000444 3300046692 Bacteria 32799
219 Ga0495671_0006652 3300046692 Bacteria 6660
220 Ga0495671_0009299 3300046692 Bacteria 5492
221 Ga0495671_0010842 3300046692 Bacteria 5038
222 Ga0495649_0007736 3300046694 Bacteria 6524
223 Ga0495649_0074048 3300046694 Bacteria 1824
224 Ga0495589_0005950 3300046794 Bacteria 6438
225 Ga0495600_0014820 3300046809 Bacteria 4917
226 Ga0495600_0025006 3300046809 Bacteria 3847
227 Ga0495660_0001887 3300046810 Bacteria 13753
228 Ga0495660_0007771 3300046810 Bacteria 6297
229 Ga0495660_0017870 3300046810 Bacteria 4079
230 Ga0495581_0003853 3300047315 Bacteria 8631
231 Ga0495581_0011172 3300047315 Bacteria 5190
232 Ga0495604_0006690 3300047317 Bacteria 9137
233 Ga0495604_0008964 3300047317 Bacteria 7910
234 Ga0495672_0034321 3300047320 Bacteria 3136
235 Ga0495672_0084030 3300047320 Bacteria 1766
236 Ga0495676_0000097 3300047321 Bacteria 65781
237 Ga0495680_0002098 3300047322 Bacteria 20711
238 Ga0495683_0000502 3300047323 Bacteria 30212
239 Ga0495683_0000603 3300047323 Bacteria 26959
240 Ga0495683_0101464 3300047323 Bacteria 1383
241 Ga0495687_000042 3300047443 Bacteria 218868
242 Ga0495687_000115 3300047443 Bacteria 122883
243 Ga0495687_000462 3300047443 Bacteria 49713
244 Ga0495687_007426 3300047443 Bacteria 6453
245 Ga0495687_007427 3300047443 Bacteria 6453
246 Ga0495675_0004121 3300047444 Bacteria 8806
247 Ga0495677_0002829 3300047445 Bacteria 6760
248 Ga0495677_0002851 3300047445 Bacteria 6734
249 Ga0495677_0003532 3300047445 Bacteria 6068
250 Ga0495677_0004112 3300047445 Bacteria 5617
251 Ga0495679_003710 3300047446 Bacteria 7265
252 Ga0495685_000229 3300047447 Bacteria 19134
253 Ga0495673_0002980 3300047469 Bacteria 11408
254 Ga0495681_0002244 3300047470 Bacteria 13902
255 Ga0495681_0011373 3300047470 Bacteria 5303
256 Ga0495681_0074948 3300047470 Bacteria 1524
257 Ga0495686_0002633 3300047472 Bacteria 16597
258 Ga0495686_0091779 3300047472 Bacteria 1843
259 Ga0495593_0000482 3300047673 Bacteria 22413
260 Ga0495602_0006021 3300048088 Bacteria 12734
261 Ga0495602_0054410 3300048088 Bacteria 3533
262 Ga0495614_0001510 3300048089 Bacteria 10073
263 Ga0495626_0000043 3300048091 Bacteria 168109
264 Ga0495626_0001507 3300048091 Bacteria 18382
265 Ga0495626_0002451 3300048091 Bacteria 12859
266 Ga0495626_0005922 3300048091 Bacteria 7041
267 Ga0495626_0006093 3300048091 Bacteria 6923
268 Ga0495626_0035086 3300048091 Bacteria 2395
269 Ga0495626_0037354 3300048091 Bacteria 2308
270 Ga0496101_0012642 3300048904 Bacteria 5639
271 Ga0496102_0002888 3300048905 Bacteria 14569
272 Ga0496102_0024621 3300048905 Bacteria 5352
273 Ga0496103_0004018 3300048906 Bacteria 8934
274 Ga0496103_0006827 3300048906 Bacteria 6813
275 Ga0496103_0017361 3300048906 Bacteria 4307
276 Ga0496106_0009812 3300048909 Bacteria 7071
277 Ga0496107_0012613 3300048910 Bacteria 5902
278 Ga0496109_0016006 3300048912 Bacteria 6554
279 Ga0496111_0149176 3300048914 Bacteria 1734
280 Ga0496112_0181755 3300048915 Bacteria 2067
281 Ga0496114_0001027 3300048917 Bacteria 20976
282 Ga0496114_0149731 3300048917 Bacteria 2024
283 Ga0496115_0072700 3300048918 Bacteria 2790
284 Ga0496117_0069812 3300048920 Bacteria 2364
285 Ga0496121_0039667 3300048924 Bacteria 4144
286 Ga0496121_0070574 3300048924 Bacteria 2813
287 Ga0496122_0000980 3300048925 Bacteria 51101
288 Ga0496122_0003149 3300048925 Bacteria 22078
289 Ga0496123_0000916 3300048926 Bacteria 46316
290 Ga0496123_0000966 3300048926 Bacteria 44396
291 Ga0496123_0004260 3300048926 Bacteria 15229
292 Ga0496124_0085403 3300048927 Bacteria 2586
293 Ga0496125_0003497 3300048928 Bacteria 18979
294 Ga0496125_0004292 3300048928 Bacteria 16553
295 Ga0495678_014461 3300049459 Bacteria 3669
296 Ga0501047_0126321 3300049581 Bacteria 2438
297 Ga0501071_0012419 3300049587 Bacteria 5777
298 Ga0501044_0064702 3300049823 Bacteria 3732
299 Ga0500618_000961 3300053125 Bacteria 14710
300 2511249575 2511231003 Bacteria 5606035
301 2550695362 2548876994 Bacteria 4904866
302 2735816913 2734482258 Unclassified 2930739
303 2765571390 2765235838 Bacteria 5445269
304 2808982442 2808606386 Bacteria 4471946
305 2809129731 2808606415 Bacteria 4576710
306 2809146008 2808606418 Bacteria 6724496
307 2809149214 2808606419 Bacteria 4576925
308 2819542340 2818991436 Bacteria 5376622
309 2819592948 2818991445 Bacteria 4955017
310 2821135367 2821131069 Bacteria 6108407
311 2839099231 2839094727 Bacteria 5534556
312 2852619355 2852618963 Bacteria 4577824
313 2884812070 2884811622 Bacteria 5552861
314 2884838540 2884836552 Bacteria 5219991
315 2884854831 2884852848 Bacteria 5221161
316 2896156500 2896154374 Bacteria 5221518
317 8047676217 8047673197 Bacteria 7395230
318 Ga0495625_0002966
319 JGI25155J39150_1000249
320 JGI25155J39150_1000328
321 JGI25156J39149_1000117
322 JGI25162J39368_1000148
323 JGI25154J39366_1000107
324 JGI25154J39366_1000440
325 JGI25157J39369_1000884
326 JGI25165J46597_1000030
327 Ga0055538_1000017
328 Ga0055539_1000022
329 Ga0055533_1000030
330 Ga0055532_1000044
331 Ga0055525_1000034
332 Ga0055535_1004355
333 Ga0055541_1000015
334 Ga0070658_10012833
335 Ga0070680_100092226
336 Ga0070682_100015436
337 Ga0070678_100212743
338 Ga0068855_100054306
339 Ga0068858_100000730
340 Ga0105251_10020002
341 Ga0105244_10000573
342 Ga0105240_10015068
343 Ga0105241_10008195
344 Ga0105241_10238484
345 Ga0105242_10002628
346 Ga0157380_10003160
347 Ga0182008_10012455
348 Ga0182008_10021653
349 Ga0157379_10110110
350 Ga0182005_1000142
351 Ga0213872_10004144
352 Ga0209435_100004
353 Ga0209435_100215
354 Ga0209784_100034
355 Ga0209566_100038
356 Ga0209674_100056
357 Ga0209147_100011
358 Ga0209563_100057
359 Ga0209437_100071
360 Ga0209437_100393
361 Ga0209258_100528
362 Ga0207425_1001711
363 Ga0209646_1000149
364 Ga0209646_1000191
365 Ga0209646_1000233
366 Ga0209026_1000066
367 Ga0209026_1003369
368 Ga0209677_100035
369 Ga0209759_1000072
370 Ga0209759_1000182
371 Ga0209233_1000094
372 Ga0209025_1001479
373 Ga0209758_1001578
374 Ga0207655_1003118
375 Ga0207713_1059539
376 Ga0207654_10003785
377 Ga0207695_10002079
378 Ga0207695_10189686
379 Ga0207660_10078892
380 Ga0207652_10307604
381 Ga0207694_10060133
382 Ga0207686_10002028
383 Ga0207667_10034970
384 Ga0207703_10004391
385 Ga0265327_10008719
386 Ga0307408_100201295
387 Ga0307408_100350187
388 Ga0316579_10015479
389 Ga0373929_0011072
390 Ga0373939_0018680
391 Ga0316582_0005719
392 Ga0316582_0120156
393 Ga0316584_0149857
394 Ga0395899_0008638
395 Ga0395899_0200029
396 Ga0395900_0013435
397 Ga0395900_0019939
398 Ga0395900_0162854
399 Ga0395900_0278312
400 Ga0395898_0026072
401 Ga0395898_0068829
402 Ga0395898_0074037
403 Ga0395905_0022063
404 Ga0395905_0036181
405 Ga0395905_0243410
406 Ga0395901_0000284
407 Ga0395901_0003656
408 Ga0395901_0094236
409 Ga0436361_0665206
410 Ga0450904_000559
411 Ga0466966_0013156
412 Ga0466957_0000028
413 Ga0466957_0015348
414 Ga0466957_0084540
415 Ga0451576_0032332
416 Ga0495617_000017
417 Ga0495617_014485
418 Ga0495627_000837
419 Ga0495627_029217
420 Ga0495592_0044762
421 Ga0495590_0004273
422 Ga0495590_0006292
423 Ga0495590_0019837
424 Ga0495591_004310
425 Ga0495638_0000408
426 Ga0495653_0000056
427 Ga0495653_0005041
428 Ga0495650_0000283
429 Ga0495580_0016106
430 Ga0495605_0000969
431 Ga0495605_0002733
432 Ga0495605_0038648
433 Ga0495584_0001029
434 Ga0495584_0005174
435 Ga0495584_0015270
436 Ga0495584_0020020
437 Ga0495585_0003165
438 Ga0495585_0006895
439 Ga0495596_0002558
440 Ga0495596_0006106
441 Ga0495596_0013469
442 Ga0495596_0019226
443 Ga0495607_0001973
444 Ga0495607_0004700
445 Ga0495607_0142760
446 Ga0495583_0000137
447 Ga0495583_0000231
448 Ga0495583_0005301
449 Ga0495583_0006704
450 Ga0495583_0023321
451 Ga0495606_0045739
452 Ga0495610_0045400
453 Ga0495616_0000724
454 Ga0495616_0008215
455 Ga0495616_0036954
456 Ga0495628_0003718
457 Ga0495630_0014626
458 Ga0495631_0005580
459 Ga0495631_0008394
460 Ga0495631_0014814
461 Ga0495631_0028940
462 Ga0495632_0028701
463 Ga0495637_0039628
464 Ga0495643_0000108
465 Ga0495643_0002706
466 Ga0495644_0006626
467 Ga0495644_0017888
468 Ga0495644_0023718
469 Ga0495644_0033358
470 Ga0495648_0000464
471 Ga0495648_0000669
472 Ga0495648_0026428
473 Ga0495648_0048216
474 Ga0495648_0126597
475 Ga0495666_0005815
476 Ga0495642_0000052
477 Ga0495642_0004912
478 Ga0495642_0018931
479 Ga0495642_0025490
480 Ga0495642_0038596
481 Ga0495652_0014677
482 Ga0495654_0011391
483 Ga0495654_0021953
484 Ga0495654_0048830
485 Ga0495665_0005204
486 Ga0495665_0032612
487 Ga0495586_0004559
488 Ga0495609_0001957
489 Ga0495609_0005929
490 Ga0495609_0011061
491 Ga0495597_0000997
492 Ga0495597_0002711
493 Ga0495597_0003113
494 Ga0495645_0040522
495 Ga0495622_0001357
496 Ga0495622_0014039
497 Ga0495633_0003582
498 Ga0495633_0004799
499 Ga0495633_0009103
500 Ga0495633_0075749
501 Ga0495656_0016408
502 Ga0495668_0000611
503 Ga0495668_0005546
504 Ga0495668_0098777
505 Ga0495634_0012376
506 Ga0495611_0007583
507 Ga0495611_0008307
508 Ga0495611_0058806
509 Ga0495611_0085374
510 Ga0495625_0028953
511 Ga0495625_0157131
512 Ga0495635_0004426
513 Ga0495659_0000552
514 Ga0495661_0000953
515 Ga0495661_0002977
516 Ga0495661_0003902
517 Ga0495661_0032082
518 Ga0495588_0005339
519 Ga0495588_0007355
520 Ga0495588_0060576
521 Ga0495623_0013583
522 Ga0495623_0082795
523 Ga0495669_0000142
524 Ga0495669_0005067
525 Ga0495613_0023713
526 Ga0495613_0049635
527 Ga0495624_0014226
528 Ga0495670_0000621
529 Ga0495670_0000692
530 Ga0495670_0003531
531 Ga0495670_0010622
532 Ga0495670_0062800
533 Ga0495670_0066193
534 Ga0495670_0099246
535 Ga0495671_0000444
536 Ga0495671_0006652
537 Ga0495671_0009299
538 Ga0495671_0010842
539 Ga0495649_0007736
540 Ga0495649_0074048
541 Ga0495589_0005950
542 Ga0495600_0014820
543 Ga0495600_0025006
544 Ga0495660_0001887
545 Ga0495660_0007771
546 Ga0495660_0017870
547 Ga0495581_0003853
548 Ga0495581_0011172
549 Ga0495604_0006690
550 Ga0495604_0008964
551 Ga0495672_0034321
552 Ga0495672_0084030
553 Ga0495676_0000097
554 Ga0495680_0002098
555 Ga0495683_0000502
556 Ga0495683_0000603
557 Ga0495683_0101464
558 Ga0495687_000042
559 Ga0495687_000115
560 Ga0495687_000462
561 Ga0495687_007426
562 Ga0495687_007427
563 Ga0495675_0004121
564 Ga0495677_0002829
565 Ga0495677_0002851
566 Ga0495677_0003532
567 Ga0495677_0004112
568 Ga0495679_003710
569 Ga0495685_000229
570 Ga0495673_0002980
571 Ga0495681_0002244
572 Ga0495681_0011373
573 Ga0495681_0074948
574 Ga0495686_0002633
575 Ga0495686_0091779
576 Ga0495593_0000482
577 Ga0495602_0006021
578 Ga0495602_0054410
579 Ga0495614_0001510
580 Ga0495626_0000043
581 Ga0495626_0001507
582 Ga0495626_0002451
583 Ga0495626_0005922
584 Ga0495626_0006093
585 Ga0495626_0035086
586 Ga0495626_0037354
587 Ga0496101_0012642
588 Ga0496102_0002888
589 Ga0496102_0024621
590 Ga0496103_0004018
591 Ga0496103_0006827
592 Ga0496103_0017361
593 Ga0496106_0009812
594 Ga0496107_0012613
595 Ga0496109_0016006
596 Ga0496111_0149176
597 Ga0496112_0181755
598 Ga0496114_0001027
599 Ga0496114_0149731
600 Ga0496115_0072700
601 Ga0496117_0069812
602 Ga0496121_0039667
603 Ga0496121_0070574
604 Ga0496122_0000980
605 Ga0496122_0003149
606 Ga0496123_0000916
607 Ga0496123_0000966
608 Ga0496123_0004260
609 Ga0496124_0085403
610 Ga0496125_0003497
611 Ga0496125_0004292
612 Ga0495678_014461
613 Ga0501047_0126321
614 Ga0501071_0012419
615 Ga0501044_0064702
616 Ga0500618_000961
617 2511249575
618 2550695362
619 2735816913
620 2765571390
621 2808982442
622 2809129731
623 2809146008
624 2809149214
625 2819542340
626 2819592948
627 2821135367
628 2839099231
629 2852619355
630 2884812070
631 2884838540
632 2884854831
633 2896156500
634 8047676217

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

177

241

0.97

PF01966

HD

HD domain

256

371

0.88

PF01743

PolyA_pol

Poly A polymerase head domain

33

152

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1miy-assembly1.cif.gz_A crystal structure of bacillus stearothermophilus cca-adding enzyme in complex with ctp 0.7536 3 402
3h39-assembly3.cif.gz_B the complex structure of cca-adding enzyme with atp 0.724 2 399
5hc9-assembly2.cif.gz_B thermotoga maritima cca-adding enzyme complexed with trna_cca 0.7109 2 371
3h3a-assembly1.cif.gz_A the complex structure of cca-adding enzyme with ctp 0.7044 2 399
1ou5-assembly1.cif.gz_B crystal structure of human cca-adding enzyme 0.6954 2 345
ID Description Score Start End Superfamily
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.9869 125 347 1.10.3090.10
af_P06961_1_124_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9787 1 123 3.30.460.10
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.9697 125 347 1.10.3090.10
af_P06961_1_124_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9634 1 123 3.30.460.10
3h37A02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.8675 120 197 1.10.110.30
ID Description Score Start End GO Terms
AF-A0A381EW65-F1-model_v4 deleted 0.9935 179 403
AF-A0A1G0R5M7-F1-model_v4 deleted 0.9917 162 407
AF-A0A257GT81-F1-model_v4 Multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 0.9898 204 377 GO:0016740
AF-K2D2H6-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9896 1 208 GO:0003723
GO:0005524
GO:0008033
GO:0016779
GO:0042245
GO:0046872
AF-A0A354ISY6-F1-model_v4 Multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase (EC 2.7.7.72, EC 3.1.4.16) 0.9883 1 201 GO:0003723
GO:0005524
GO:0008033
GO:0008663
GO:0042245
GO:0046872
GO:0160016

Map