F404597

General Info

Members Datasets Scaffolds Average Seq Length
318 215 306 430

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10021364|Ga0157370_100213642
Length 477
Sequence MQFNKQHFPGKPEVSLFARPYVFLPTIPRYPPMNDSIDRRQFLKRTGAASIGLAMAANLDSLVSANAGENSNMARKIGPNDRITAAVIGTNGRGLAHIQCLRRLSGVEIAYICDVDDRAIAKGIKTATANNKPAPKGIKDFREVLKDPSVDVVTIATPDHWHTPMAILAMAAGKHVYVEKPCSQNPYEGVLLLAAVDKYKRVVQMGAQRRSSAHMREIIPQIHAGIIGRTYYARGWYVNNRESIGHGKPAPVPEWLDYELWQGPAPRRPYVDNLIHYNEALNNGTHEIDVCRWALDVNWPSKVSSNGGRYQFQDDWQTPDTQVINCDFAEGKTLTWEGRSCNDFPIENKSRGALIYGTDGTAFLDGNDYIIYDKKKKIVKQAKGNEVVDPTNTVSASGIGMDTAHVANFLHAVRGQESLTCPIVEGYKSVSLLHLGNIAWRVGRELHCDPANGHILNDPEAAKLWRREYEPGWEPRV

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541284 Pedobacter sp. YR016 Isolate Unclassified
3 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
4 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
5 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
6 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
9 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
16 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
24 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
25 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
37 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
38 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
39 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
40 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
41 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
42 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
43 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
44 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
49 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
50 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
59 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
60 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
61 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
62 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
63 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
66 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
67 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
68 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
69 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
70 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
92 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
93 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
94 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
95 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
96 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
97 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
126 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
127 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
128 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
129 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
130 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
131 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
132 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
133 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
134 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
139 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
140 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
141 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
142 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
143 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
144 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
145 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
146 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
148 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
149 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
150 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
151 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
157 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
158 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
159 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
160 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
161 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
162 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
163 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
164 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
165 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
166 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
167 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
168 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
169 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
170 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
171 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
172 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
173 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
177 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
178 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
179 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
180 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
181 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
182 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
183 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
184 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
192 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
193 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
194 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
195 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
196 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
197 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
198 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
199 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
200 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
201 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
205 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
206 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
207 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
208 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
209 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
210 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
211 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
212 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
213 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
214 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
215 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.91
Metatranscriptomes 0.31
Isolates 3.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.72
Nodule 0
Rhizoplane 0.31
Rhizosphere 88.36
Stem 0
Stem Tuber 0
Unclassified 6.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000250 3300001990 Bacteria 17771
2 JGI24735J21928_10000014 3300002067 Bacteria 186670
3 JGI25162J39368_1000012 3300002737 Bacteria 373191
4 JGI25165J46597_1000620 3300003214 Bacteria 29837
5 rootH1_10032414 3300003316 Bacteria 11991
6 rootH2_10078689 3300003320 Bacteria 9127
7 rootH2_10139311 3300003320 Bacteria 2598
8 rootH1_10002605 3300003323 Bacteria 51064
9 rootH1_10068122 3300003323 Bacteria 4024
10 rootH1_10269910 3300003323 Bacteria 2305
11 Ga0058863_10624032 3300004799 Bacteria 3302
12 Ga0065714_10002468 3300005288 Bacteria 47042
13 Ga0065714_10004629 3300005288 Bacteria 13722
14 Ga0065704_10000216 3300005289 Bacteria 79434
15 Ga0065704_10076256 3300005289 Bacteria 5200
16 Ga0065712_10110977 3300005290 Bacteria 1826
17 Ga0065712_10129660 3300005290 Bacteria 1565
18 Ga0065707_10090186 3300005295 Bacteria 4185
19 Ga0070690_100056648 3300005330 Bacteria 2514
20 Ga0070690_100163648 3300005330 Bacteria 1526
21 Ga0068869_100005461 3300005334 Bacteria 7998
22 Ga0070666_10023817 3300005335 Bacteria 3986
23 Ga0070680_100008299 3300005336 Bacteria 7947
24 Ga0070680_100019634 3300005336 Bacteria 5360
25 Ga0070691_10029302 3300005341 Bacteria 2574
26 Ga0070687_100113324 3300005343 Bacteria 1539
27 Ga0070669_100001284 3300005353 Bacteria 18150
28 Ga0070669_100021162 3300005353 Unclassified 4648
29 Ga0070675_100124326 3300005354 Bacteria 2194
30 Ga0070688_100051706 3300005365 Bacteria 2564
31 Ga0070688_100132312 3300005365 Bacteria 1685
32 Ga0070703_10001519 3300005406 Bacteria 6925
33 Ga0070703_10002448 3300005406 Bacteria 5347
34 Ga0070714_100017079 3300005435 Bacteria 5875
35 Ga0070701_10001826 3300005438 Bacteria 8054
36 Ga0070705_100036088 3300005440 Bacteria 2776
37 Ga0070694_100011474 3300005444 Bacteria 5488
38 Ga0070708_100014792 3300005445 Bacteria 6431
39 Ga0070681_10000455 3300005458 Bacteria 33546
40 Ga0070706_100107942 3300005467 Bacteria 2590
41 Ga0070707_100059113 3300005468 Bacteria 3677
42 Ga0070698_100095933 3300005471 Bacteria 2943
43 Ga0070699_100010009 3300005518 Bacteria 8206
44 Ga0070699_100227956 3300005518 Bacteria 1661
45 Ga0070679_100000546 3300005530 Bacteria 31896
46 Ga0070679_100043805 3300005530 Bacteria 4456
47 Ga0070697_100142183 3300005536 Bacteria 2019
48 Ga0070672_100043050 3300005543 Bacteria 3479
49 Ga0070672_100048522 3300005543 Bacteria 3300
50 Ga0070686_100033861 3300005544 Bacteria 3143
51 Ga0070696_100038542 3300005546 Bacteria 3299
52 Ga0070696_100103890 3300005546 Bacteria 2039
53 Ga0070704_100022227 3300005549 Bacteria 4125
54 Ga0070704_100226044 3300005549 Bacteria 1524
55 Ga0068855_100000152 3300005563 Bacteria 87996
56 Ga0068855_100000771 3300005563 Bacteria 39483
57 Ga0068855_100151989 3300005563 Bacteria 2632
58 Ga0070664_100073448 3300005564 Unclassified 2935
59 Ga0068857_100090498 3300005577 Bacteria 2738
60 Ga0068854_100057273 3300005578 Bacteria 2811
61 Ga0068856_100000271 3300005614 Bacteria 56548
62 Ga0068856_100013921 3300005614 Bacteria 7780
63 Ga0070702_100152108 3300005615 Bacteria 1487
64 Ga0068852_100047470 3300005616 Unclassified 3664
65 Ga0068859_100010940 3300005617 Bacteria 9133
66 Ga0068859_100111267 3300005617 Bacteria 2801
67 Ga0068859_100222822 3300005617 Unclassified 1974
68 Ga0068861_100025257 3300005719 Bacteria 4307
69 Ga0068858_100055755 3300005842 Bacteria 3653
70 Ga0068862_100036137 3300005844 Bacteria 4186
71 Ga0070716_100001220 3300006173 Bacteria 11304
72 Ga0075366_10002687 3300006195 Bacteria 9174
73 Ga0075428_100025522 3300006844 Bacteria 6543
74 Ga0075428_100063337 3300006844 Bacteria 4048
75 Ga0075428_100112904 3300006844 Bacteria 2960
76 Ga0075430_100049339 3300006846 Bacteria 3553
77 Ga0075431_100002679 3300006847 Bacteria 17251
78 Ga0075433_10002613 3300006852 Bacteria 13738
79 Ga0075434_100007952 3300006871 Bacteria 9827
80 Ga0075429_100006942 3300006880 Bacteria 9838
81 Ga0075436_100035462 3300006914 Bacteria 3441
82 Ga0097620_100010940 3300006931 Bacteria 9133
83 Ga0097620_100111264 3300006931 Bacteria 2801
84 Ga0097620_100222822 3300006931 Unclassified 1974
85 Ga0099794_10080191 3300007265 Bacteria 1609
86 Ga0105240_10027037 3300009093 Bacteria 7520
87 Ga0105240_10071074 3300009093 Bacteria 4304
88 Ga0105240_10094292 3300009093 Bacteria 3651
89 Ga0105240_10128636 3300009093 Bacteria 3040
90 Ga0105240_10159645 3300009093 Bacteria 2679
91 Ga0111539_10006003 3300009094 Bacteria 15693
92 Ga0105245_10254144 3300009098 Bacteria 1708
93 Ga0114129_10001594 3300009147 Bacteria 30815
94 Ga0105243_10018582 3300009148 Bacteria 5268
95 Ga0105237_10004197 3300009545 Bacteria 16773
96 Ga0105237_10004348 3300009545 Bacteria 16418
97 Ga0105238_10003993 3300009551 Bacteria 14639
98 Ga0105238_10029174 3300009551 Bacteria 5621
99 Ga0105249_10012757 3300009553 Bacteria 7408
100 Ga0105239_10000013 3300010375 Bacteria 327371
101 Ga0105239_10000117 3300010375 Bacteria 112291
102 Ga0105239_10002322 3300010375 Bacteria 24279
103 Ga0105239_10004499 3300010375 Bacteria 16638
104 Ga0105239_10006696 3300010375 Bacteria 13312
105 Ga0105239_10181180 3300010375 Bacteria 2357
106 Ga0157373_10000172 3300013100 Bacteria 52820
107 Ga0157371_10002083 3300013102 Bacteria 19571
108 Ga0157371_10003097 3300013102 Bacteria 15414
109 Ga0157370_10001160 3300013104 Bacteria 32869
110 Ga0157370_10021364 3300013104 Bacteria 6449
111 Ga0157369_10024625 3300013105 Bacteria 6692
112 Ga0157378_10024164 3300013297 Bacteria 5345
113 Ga0157378_10098880 3300013297 Unclassified 2661
114 Ga0163162_10025184 3300013306 Bacteria 5881
115 Ga0163162_10036541 3300013306 Bacteria 4897
116 Ga0163162_10285972 3300013306 Bacteria 1781
117 Ga0157372_10027409 3300013307 Bacteria 6203
118 Ga0157375_10002891 3300013308 Bacteria 14879
119 Ga0157380_10003195 3300014326 Bacteria 11186
120 Ga0157380_10029885 3300014326 Bacteria 4168
121 Ga0157380_10196763 3300014326 Bacteria 1785
122 Ga0157380_10246174 3300014326 Unclassified 1615
123 Ga0157380_10265051 3300014326 Bacteria 1563
124 Ga0157380_10310035 3300014326 Bacteria 1458
125 Ga0157377_10062031 3300014745 Bacteria 2138
126 Ga0213876_10004555 3300021384 Bacteria 7738
127 Ga0207427_100106 3300025231 Bacteria 117041
128 Ga0209437_100041 3300025233 Bacteria 444465
129 Ga0209437_100226 3300025233 Bacteria 100303
130 Ga0209026_1001025 3300025250 Bacteria 13732
131 Ga0209233_1000089 3300025261 Bacteria 316381
132 Ga0209233_1003498 3300025261 Bacteria 5520
133 Ga0209455_1012000 3300025272 Bacteria 2097
134 Ga0209050_1001434 3300025298 Bacteria 25653
135 Ga0207653_10016352 3300025885 Bacteria 2331
136 Ga0207642_10021189 3300025899 Bacteria 2555
137 Ga0207688_10010331 3300025901 Bacteria 5083
138 Ga0207684_10007223 3300025910 Bacteria 10040
139 Ga0207684_10029577 3300025910 Bacteria 4663
140 Ga0207695_10024891 3300025913 Bacteria 6718
141 Ga0207695_10042241 3300025913 Bacteria 4872
142 Ga0207695_10055383 3300025913 Bacteria 4133
143 Ga0207695_10104413 3300025913 Bacteria 2823
144 Ga0207671_10001723 3300025914 Bacteria 24643
145 Ga0207671_10005944 3300025914 Bacteria 11058
146 Ga0207660_10031126 3300025917 Bacteria 3671
147 Ga0207660_10038053 3300025917 Bacteria 3356
148 Ga0207662_10020160 3300025918 Bacteria 3803
149 Ga0207662_10073731 3300025918 Bacteria 2071
150 Ga0207652_10005064 3300025921 Bacteria 10690
151 Ga0207652_10046447 3300025921 Bacteria 3705
152 Ga0207646_10001382 3300025922 Bacteria 30119
153 Ga0207646_10002153 3300025922 Bacteria 23521
154 Ga0207681_10011254 3300025923 Bacteria 5495
155 Ga0207681_10035359 3300025923 Bacteria 3291
156 Ga0207694_10016275 3300025924 Bacteria 5612
157 Ga0207650_10095789 3300025925 Bacteria 2276
158 Ga0207650_10103030 3300025925 Bacteria 2200
159 Ga0207659_10071801 3300025926 Bacteria 2529
160 Ga0207706_10235467 3300025933 Bacteria 1601
161 Ga0207665_10000967 3300025939 Bacteria 19446
162 Ga0207691_10003598 3300025940 Bacteria 15060
163 Ga0207691_10072576 3300025940 Bacteria 3105
164 Ga0207691_10110944 3300025940 Bacteria 2439
165 Ga0207691_10136296 3300025940 Bacteria 2165
166 Ga0207689_10016977 3300025942 Bacteria 6159
167 Ga0207667_10000009 3300025949 Bacteria 603135
168 Ga0207667_10001880 3300025949 Bacteria 26413
169 Ga0207667_10082020 3300025949 Bacteria 3341
170 Ga0207658_10233852 3300025986 Bacteria 1553
171 Ga0207708_10014996 3300026075 Bacteria 5808
172 Ga0207702_10000284 3300026078 Bacteria 58710
173 Ga0207648_10009444 3300026089 Bacteria 9343
174 Ga0207675_100010800 3300026118 Bacteria 8557
175 Ga0209588_1000679 3300027671 Bacteria 8556
176 Ga0268265_10054811 3300028380 Bacteria 3027
177 Ga0265337_1001298 3300028556 Bacteria 12502
178 Ga0265337_1035320 3300028556 Bacteria 1465
179 Ga0265318_10003552 3300028577 Bacteria 7815
180 Ga0307515_10000707 3300028794 Bacteria 76907
181 Ga0307515_10003035 3300028794 Bacteria 35572
182 Ga0265338_10000199 3300028800 Bacteria 113221
183 Ga0265338_10009436 3300028800 Bacteria 11631
184 Ga0265324_10028034 3300029957 Unclassified 1987
185 Ga0307511_10006500 3300030521 Bacteria 11771
186 Ga0265328_10010861 3300031239 Bacteria 3657
187 Ga0265320_10002874 3300031240 Bacteria 11824
188 Ga0265325_10001740 3300031241 Bacteria 15118
189 Ga0265325_10039281 3300031241 Bacteria 2493
190 Ga0265340_10011535 3300031247 Bacteria 4696
191 Ga0265327_10003398 3300031251 Bacteria 15284
192 Ga0265327_10009305 3300031251 Bacteria 7112
193 Ga0265316_10025161 3300031344 Bacteria 4971
194 Ga0307513_10151680 3300031456 Bacteria 2225
195 Ga0307509_10028648 3300031507 Bacteria 6189
196 Ga0265313_10034107 3300031595 Bacteria 2577
197 Ga0265342_10039162 3300031712 Bacteria 2881
198 Ga0316576_10030745 3300031727 Bacteria 3805
199 Ga0316576_10221450 3300031727 Bacteria 1423
200 Ga0307412_10000009 3300031911 Bacteria 445987
201 Ga0307414_10000207 3300032004 Bacteria 39639
202 Ga0307507_10000015 3300033179 Bacteria 237419
203 Ga0373955_0114646 3300035172 Bacteria 1561
204 Ga0373925_0030658 3300037068 Bacteria 3948
205 Ga0395899_0000237 3300037312 Bacteria 74249
206 Ga0436365_1584543 3300039437 Bacteria 38465
207 Ga0451577_0007140 3300042876 Bacteria 11016
208 Ga0451577_0018351 3300042876 Bacteria 6447
209 Ga0451577_0142227 3300042876 Bacteria 2156
210 Ga0466972_0000002 3300044658 Bacteria 408005
211 Ga0453683_0000136 3300044673 Bacteria 107540
212 Ga0453683_0017943 3300044673 Bacteria 4546
213 Ga0453683_0117082 3300044673 Bacteria 1677
214 Ga0453684_0000557 3300044712 Bacteria 140566
215 Ga0453684_0010426 3300044712 Bacteria 15897
216 Ga0453684_0033746 3300044712 Bacteria 7124
217 Ga0453684_0034931 3300044712 Bacteria 6962
218 Ga0453684_0051054 3300044712 Bacteria 5429
219 Ga0466970_0000187 3300044765 Bacteria 29931
220 Ga0451576_0000372 3300045051 Bacteria 106158
221 Ga0451576_0001046 3300045051 Bacteria 50952
222 Ga0451576_0004785 3300045051 Bacteria 17352
223 Ga0451576_0310050 3300045051 Bacteria 1651
224 Ga0495629_0099146 3300046459 Bacteria 2033
225 Ga0495638_0000006 3300046460 Bacteria 668846
226 Ga0495638_0006851 3300046460 Bacteria 8224
227 Ga0495638_0144035 3300046460 Bacteria 1388
228 Ga0495651_0056679 3300046462 Bacteria 3009
229 Ga0495651_0155903 3300046462 Bacteria 1641
230 Ga0495650_0000003 3300046471 Bacteria 900730
231 Ga0495582_0070079 3300046473 Bacteria 1939
232 Ga0495585_0000408 3300046492 Bacteria 41651
233 Ga0495585_0000652 3300046492 Bacteria 31861
234 Ga0495583_0016594 3300046506 Bacteria 3952
235 Ga0495606_0000145 3300046507 Bacteria 122857
236 Ga0495610_0001383 3300046512 Bacteria 21542
237 Ga0495616_0004914 3300046513 Bacteria 8353
238 Ga0495616_0005863 3300046513 Bacteria 7497
239 Ga0495630_0000010 3300046517 Bacteria 265324
240 Ga0495648_0005226 3300046524 Bacteria 10855
241 Ga0495648_0093695 3300046524 Bacteria 1674
242 Ga0495666_0002094 3300046526 Bacteria 9891
243 Ga0495586_0000032 3300046535 Bacteria 93203
244 Ga0495622_0049004 3300046557 Bacteria 1961
245 Ga0495633_0000044 3300046558 Bacteria 171185
246 Ga0495633_0003411 3300046558 Bacteria 10594
247 Ga0495668_0000012 3300046616 Bacteria 458817
248 Ga0495625_0000005 3300046660 Bacteria 596135
249 Ga0495625_0003718 3300046660 Bacteria 14874
250 Ga0495625_0005166 3300046660 Bacteria 12044
251 Ga0495625_0085839 3300046660 Bacteria 2184
252 Ga0495625_0144723 3300046660 Bacteria 1601
253 Ga0495661_0069950 3300046665 Bacteria 2055
254 Ga0495649_0000003 3300046694 Bacteria 880817
255 Ga0495660_0042629 3300046810 Bacteria 2507
256 Ga0495674_0013268 3300047319 Bacteria 7748
257 Ga0495676_0003779 3300047321 Bacteria 13759
258 Ga0495687_000833 3300047443 Bacteria 32923
259 Ga0495686_0000454 3300047472 Bacteria 61738
260 Ga0495686_0072712 3300047472 Bacteria 2114
261 Ga0495686_0095703 3300047472 Bacteria 1798
262 Ga0496125_0000078 3300048928 Bacteria 230157
263 Ga0495678_020239 3300049459 Bacteria 2951
264 Ga0501298_002690 3300049521 Bacteria 2712
265 Ga0501299_008321 3300049522 Bacteria 1684
266 Ga0501032_0271454 3300049569 Bacteria 1099
267 Ga0501034_0002226 3300049571 Bacteria 23906
268 Ga0501034_0297613 3300049571 Bacteria 1551
269 Ga0501036_0068015 3300049572 Bacteria 3014
270 Ga0501037_0018781 3300049573 Bacteria 5094
271 Ga0501039_0018085 3300049575 Bacteria 5409
272 Ga0501043_0006937 3300049579 Bacteria 9032
273 Ga0501047_0059438 3300049581 Bacteria 3690
274 Ga0501047_0074823 3300049581 Bacteria 3260
275 Ga0501198_004483 3300049649 Bacteria 1939
276 Ga0501201_000855 3300049651 Bacteria 2867
277 Ga0501202_001051 3300049652 Bacteria 4279
278 Ga0501207_000621 3300049654 Bacteria 4100
279 Ga0501217_001182 3300049661 Bacteria 4806
280 Ga0501222_000425 3300049662 Bacteria 6320
281 Ga0501243_004904 3300049675 Bacteria 2008
282 Ga0501259_000357 3300049688 Bacteria 7170
283 Ga0501221_000233 3300049704 Bacteria 8017
284 Ga0501225_0014996 3300049705 Bacteria 2162
285 Ga0501080_0050509 3300049742 Unclassified 3870
286 Ga0501035_0003921 3300049822 Bacteria 14188
287 Ga0501035_0305221 3300049822 Bacteria 1340
288 Ga0501044_0016924 3300049823 Bacteria 7822
289 Ga0501044_0108917 3300049823 Bacteria 2780
290 nmdc:mga0k408_41_c1 3300050493 Bacteria 56836
291 nmdc:mga05p37_1200_c1 3300050507 Bacteria 29977
292 nmdc:mga09592_31757_c1 3300050508 Bacteria 4401
293 nmdc:mga06r32_11542_c1 3300050510 Bacteria 7959
294 nmdc:mga08y16_13852_c1 3300050511 Bacteria 8487
295 nmdc:mga08y16_6422_c1 3300050511 Bacteria 12326
296 nmdc:mga0n895_12896_c1 3300050512 Bacteria 7512
297 nmdc:mga0n895_4222_c1 3300050512 Bacteria 11745
298 nmdc:mga0rr50_141855_c1 3300050513 Bacteria 1934
299 nmdc:mga08x19_75740_c1 3300050514 Bacteria 2201
300 nmdc:mga0a205_15183_c1 3300050515 Bacteria 7195
301 nmdc:mga0a205_17601_c1 3300050515 Bacteria 6705
302 nmdc:mga0a205_2031_c1 3300050515 Bacteria 17669
303 Ga0500651_0000118 3300053093 Bacteria 48836
304 Ga0500618_000061 3300053125 Bacteria 96180
305 Ga0500616_0000065 3300053153 Bacteria 239287
306 Ga0500616_0004810 3300053153 Bacteria 9451

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049569 Ga0501032_0271454 Ga0501032_0271454_82_1089 320
2 3300004799 Ga0058863_10624032 Ga0058863_106240322 336
3 3300005336 Ga0070680_100019634 Ga0070680_1000196342 336
4 3300005530 Ga0070679_100043805 Ga0070679_1000438053 336
5 3300025917 Ga0207660_10038053 Ga0207660_100380535 336
6 3300025921 Ga0207652_10046447 Ga0207652_100464472 336
7 3300046660 Ga0495625_0144723 Ga0495625_0144723_22_1152 365
8 3300014326 Ga0157380_10196763 Ga0157380_101967631 376
9 3300049652 Ga0501202_001051 Ga0501202_001051_3080_4255 379
10 3300046524 Ga0495648_0093695 Ga0495648_0093695_441_1643 383
11 3300025913 Ga0207695_10042241 Ga0207695_100422416 385
12 3300049822 Ga0501035_0305221 Ga0501035_0305221_73_1275 385
13 3300045051 Ga0451576_0310050 Ga0451576_0310050_433_1641 389
14 3300005330 Ga0070690_100056648 Ga0070690_1000566482 390
15 3300005438 Ga0070701_10001826 Ga0070701_100018267 390
16 3300005544 Ga0070686_100033861 Ga0070686_1000338612 390
17 3300005615 Ga0070702_100152108 Ga0070702_1001521082 390
18 3300025918 Ga0207662_10073731 Ga0207662_100737312 390
19 3300028800 Ga0265338_10009436 Ga0265338_100094365 390
20 3300031241 Ga0265325_10039281 Ga0265325_100392812 390
21 3300047472 Ga0495686_0072712 Ga0495686_0072712_17_1222 390
22 3300047472 Ga0495686_0095703 Ga0495686_0095703_559_1764 390
23 3300006844 Ga0075428_100063337 Ga0075428_1000633372 392
24 3300005518 Ga0070699_100227956 Ga0070699_1002279562 393
25 3300007265 Ga0099794_10080191 Ga0099794_100801911 393
26 3300046459 Ga0495629_0099146 Ga0495629_0099146_220_1539 393
27 3300046460 Ga0495638_0006851 Ga0495638_0006851_4347_5675 396
28 3300025986 Ga0207658_10233852 Ga0207658_102338521 399
29 3300025913 Ga0207695_10024891 Ga0207695_100248912 402
30 3300009093 Ga0105240_10027037 Ga0105240_100270375 403
31 3300049742 Ga0501080_0050509 Ga0501080_0050509_298_1665 405
32 3300029957 Ga0265324_10028034 Ga0265324_100280342 406
33 3300005336 Ga0070680_100008299 Ga0070680_1000082997 408
34 3300005458 Ga0070681_10000455 Ga0070681_1000045519 408
35 3300005530 Ga0070679_100000546 Ga0070679_1000005462 408
36 3300025917 Ga0207660_10031126 Ga0207660_100311262 408
37 3300025921 Ga0207652_10005064 Ga0207652_1000506410 408
38 3300049571 Ga0501034_0297613 Ga0501034_0297613_103_1446 408
39 3300014326 Ga0157380_10265051 Ga0157380_102650512 411
40 3300044712 Ga0453684_0051054 Ga0453684_0051054_4119_5390 411
41 3300048928 Ga0496125_0000078 Ga0496125_0000078_184739_186079 411
42 3300005563 Ga0068855_100000771 Ga0068855_1000007718 412
43 3300025949 Ga0207667_10001880 Ga0207667_1000188015 412
44 3300003320 rootH2_10078689 rootH2_100786893 413
45 3300028556 Ga0265337_1001298 Ga0265337_100129810 413
46 3300031247 Ga0265340_10011535 Ga0265340_100115354 413
47 3300031251 Ga0265327_10009305 Ga0265327_100093054 413
48 3300031712 Ga0265342_10039162 Ga0265342_100391622 413
49 3300005435 Ga0070714_100017079 Ga0070714_1000170793 414
50 3300044658 Ga0466972_0000002 Ga0466972_0000002_232058_233380 415
51 3300044765 Ga0466970_0000187 Ga0466970_0000187_7476_8798 415
52 3300003214 JGI25165J46597_1000620 JGI25165J46597_10006204 416
53 3300003323 rootH1_10002605 rootH1_1000260535 416
54 3300003323 rootH1_10068122 rootH1_100681222 416
55 3300009094 Ga0111539_10006003 Ga0111539_100060035 416
56 3300025231 Ga0207427_100106 Ga0207427_10010662 416
57 3300025233 Ga0209437_100226 Ga0209437_10022661 416
58 3300025261 Ga0209233_1000089 Ga0209233_100008961 416
59 3300050511 nmdc:mga08y16_6422_c1 nmdc:mga08y16_6422_c1_931_2268 416
60 3300046810 Ga0495660_0042629 Ga0495660_0042629_1112_2440 417
61 3300005341 Ga0070691_10029302 Ga0070691_100293022 418
62 3300005468 Ga0070707_100059113 Ga0070707_1000591133 418
63 3300005518 Ga0070699_100010009 Ga0070699_1000100098 418
64 3300005536 Ga0070697_100142183 Ga0070697_1001421832 418
65 3300009093 Ga0105240_10094292 Ga0105240_100942922 418
66 3300009551 Ga0105238_10029174 Ga0105238_100291745 418
67 3300025924 Ga0207694_10016275 Ga0207694_100162755 418
68 3300005406 Ga0070703_10001519 Ga0070703_100015196 419
69 3300005406 Ga0070703_10002448 Ga0070703_100024485 419
70 3300005440 Ga0070705_100036088 Ga0070705_1000360882 419
71 3300005444 Ga0070694_100011474 Ga0070694_1000114745 419
72 3300005445 Ga0070708_100014792 Ga0070708_1000147924 419
73 3300005471 Ga0070698_100095933 Ga0070698_1000959332 419
74 3300005546 Ga0070696_100038542 Ga0070696_1000385423 419
75 3300005546 Ga0070696_100103890 Ga0070696_1001038902 419
76 3300005549 Ga0070704_100022227 Ga0070704_1000222272 419
77 3300006173 Ga0070716_100001220 Ga0070716_1000012206 419
78 3300006844 Ga0075428_100025522 Ga0075428_1000255225 419
79 3300006846 Ga0075430_100049339 Ga0075430_1000493393 419
80 3300006852 Ga0075433_10002613 Ga0075433_1000261311 419
81 3300006871 Ga0075434_100007952 Ga0075434_1000079522 419
82 3300006914 Ga0075436_100035462 Ga0075436_1000354622 419
83 3300009093 Ga0105240_10159645 Ga0105240_101596452 419
84 3300009147 Ga0114129_10001594 Ga0114129_1000159411 419
85 3300009551 Ga0105238_10003993 Ga0105238_100039938 419
86 3300013104 Ga0157370_10001160 Ga0157370_1000116020 419
87 3300025885 Ga0207653_10016352 Ga0207653_100163522 419
88 3300025910 Ga0207684_10007223 Ga0207684_100072235 419
89 3300025910 Ga0207684_10029577 Ga0207684_100295774 419
90 3300025922 Ga0207646_10001382 Ga0207646_1000138210 419
91 3300025922 Ga0207646_10002153 Ga0207646_1000215311 419
92 3300025939 Ga0207665_10000967 Ga0207665_100009679 419
93 3300031251 Ga0265327_10003398 Ga0265327_1000339813 419
94 3300031344 Ga0265316_10025161 Ga0265316_100251611 419
95 3300031595 Ga0265313_10034107 Ga0265313_100341072 419
96 3300046513 Ga0495616_0004914 Ga0495616_0004914_312_1640 419
97 3300049459 Ga0495678_020239 Ga0495678_020239_1607_2935 419
98 3300050507 nmdc:mga05p37_1200_c1 nmdc:mga05p37_1200_c1_19986_21299 419
99 3300050512 nmdc:mga0n895_12896_c1 nmdc:mga0n895_12896_c1_429_1742 419
100 3300050512 nmdc:mga0n895_4222_c1 nmdc:mga0n895_4222_c1_2012_3325 419
101 3300050513 nmdc:mga0rr50_141855_c1 nmdc:mga0rr50_141855_c1_122_1432 419
102 3300050514 nmdc:mga08x19_75740_c1 nmdc:mga08x19_75740_c1_862_2175 419
103 3300050515 nmdc:mga0a205_15183_c1 nmdc:mga0a205_15183_c1_1238_2548 419
104 3300050515 nmdc:mga0a205_17601_c1 nmdc:mga0a205_17601_c1_2867_4180 419
105 3300050515 nmdc:mga0a205_2031_c1 nmdc:mga0a205_2031_c1_13808_15121 419
106 3300013297 Ga0157378_10024164 Ga0157378_100241642 420
107 3300013306 Ga0163162_10025184 Ga0163162_100251844 420
108 3300013306 Ga0163162_10285972 Ga0163162_102859722 420
109 3300027671 Ga0209588_1000679 Ga0209588_10006793 420
110 3300045051 Ga0451576_0001046 Ga0451576_0001046_4045_5370 420
111 3300045051 Ga0451576_0004785 Ga0451576_0004785_3926_5251 420
112 3300046460 Ga0495638_0144035 Ga0495638_0144035_28_1323 420
113 3300028800 Ga0265338_10000199 Ga0265338_1000019984 421
114 3300031241 Ga0265325_10001740 Ga0265325_100017402 421
115 3300028577 Ga0265318_10003552 Ga0265318_100035524 422
116 3300031239 Ga0265328_10010861 Ga0265328_100108613 422
117 3300031240 Ga0265320_10002874 Ga0265320_100028747 422
118 3300037068 Ga0373925_0030658 Ga0373925_0030658_2315_3655 422
119 3300046473 Ga0495582_0070079 Ga0495582_0070079_377_1717 422
120 3300046517 Ga0495630_0000010 Ga0495630_0000010_16100_17440 422
121 3300046526 Ga0495666_0002094 Ga0495666_0002094_1038_2378 422
122 3300046535 Ga0495586_0000032 Ga0495586_0000032_14743_16083 422
123 3300047319 Ga0495674_0013268 Ga0495674_0013268_5651_6991 422
124 3300047321 Ga0495676_0003779 Ga0495676_0003779_128_1468 422
125 3300047472 Ga0495686_0000454 Ga0495686_0000454_13701_15026 423
126 3300031727 Ga0316576_10221450 Ga0316576_102214501 424
127 3300053153 Ga0500616_0004810 Ga0500616_0004810_7683_8993 424
128 3300002737 JGI25162J39368_1000012 JGI25162J39368_100001257 425
129 3300005330 Ga0070690_100163648 Ga0070690_1001636481 425
130 3300005334 Ga0068869_100005461 Ga0068869_1000054611 425
131 3300005335 Ga0070666_10023817 Ga0070666_100238174 425
132 3300005343 Ga0070687_100113324 Ga0070687_1001133241 425
133 3300005353 Ga0070669_100021162 Ga0070669_1000211622 425
134 3300005365 Ga0070688_100051706 Ga0070688_1000517063 425
135 3300005467 Ga0070706_100107942 Ga0070706_1001079422 425
136 3300005543 Ga0070672_100043050 Ga0070672_1000430502 425
137 3300005549 Ga0070704_100226044 Ga0070704_1002260441 425
138 3300005563 Ga0068855_100000152 Ga0068855_10000015261 425
139 3300005564 Ga0070664_100073448 Ga0070664_1000734481 425
140 3300005616 Ga0068852_100047470 Ga0068852_1000474703 425
141 3300005617 Ga0068859_100111267 Ga0068859_1001112672 425
142 3300005719 Ga0068861_100025257 Ga0068861_1000252572 425
143 3300005842 Ga0068858_100055755 Ga0068858_1000557552 425
144 3300006931 Ga0097620_100111264 Ga0097620_1001112642 425
145 3300009098 Ga0105245_10254144 Ga0105245_102541441 425
146 3300009148 Ga0105243_10018582 Ga0105243_100185821 425
147 3300010375 Ga0105239_10000117 Ga0105239_1000011781 425
148 3300010375 Ga0105239_10181180 Ga0105239_101811802 425
149 3300013297 Ga0157378_10098880 Ga0157378_100988803 425
150 3300025233 Ga0209437_100041 Ga0209437_100041102 425
151 3300025899 Ga0207642_10021189 Ga0207642_100211892 425
152 3300025901 Ga0207688_10010331 Ga0207688_100103312 425
153 3300025918 Ga0207662_10020160 Ga0207662_100201603 425
154 3300025923 Ga0207681_10035359 Ga0207681_100353592 425
155 3300025940 Ga0207691_10003598 Ga0207691_100035988 425
156 3300025942 Ga0207689_10016977 Ga0207689_100169772 425
157 3300025949 Ga0207667_10000009 Ga0207667_100000097 425
158 3300026075 Ga0207708_10014996 Ga0207708_100149962 425
159 3300026089 Ga0207648_10009444 Ga0207648_100094444 425
160 3300035172 Ga0373955_0114646 Ga0373955_0114646_96_1469 425
161 3300044712 Ga0453684_0033746 Ga0453684_0033746_5229_6569 425
162 3300005563 Ga0068855_100151989 Ga0068855_1001519892 426
163 3300006195 Ga0075366_10002687 Ga0075366_100026872 426
164 3300009545 Ga0105237_10004348 Ga0105237_100043485 426
165 3300010375 Ga0105239_10002322 Ga0105239_100023224 426
166 3300014326 Ga0157380_10003195 Ga0157380_100031955 426
167 3300025914 Ga0207671_10005944 Ga0207671_100059446 426
168 3300025925 Ga0207650_10103030 Ga0207650_101030302 426
169 3300025940 Ga0207691_10110944 Ga0207691_101109442 426
170 3300025940 Ga0207691_10136296 Ga0207691_101362961 426
171 3300025949 Ga0207667_10082020 Ga0207667_100820202 426
172 3300028794 Ga0307515_10000707 Ga0307515_1000070755 426
173 3300028794 Ga0307515_10003035 Ga0307515_1000303526 426
174 3300046462 Ga0495651_0155903 Ga0495651_0155903_19_1350 426
175 3300046492 Ga0495585_0000408 Ga0495585_0000408_22136_23467 426
176 3300046524 Ga0495648_0005226 Ga0495648_0005226_428_1759 426
177 3300046557 Ga0495622_0049004 Ga0495622_0049004_210_1541 426
178 3300046558 Ga0495633_0000044 Ga0495633_0000044_16759_18090 426
179 3300046616 Ga0495668_0000012 Ga0495668_0000012_240944_242275 426
180 3300046660 Ga0495625_0003718 Ga0495625_0003718_4865_6196 426
181 3300046660 Ga0495625_0005166 Ga0495625_0005166_5685_7016 426
182 3300046660 Ga0495625_0085839 Ga0495625_0085839_382_1713 426
183 3300050493 nmdc:mga0k408_41_c1 nmdc:mga0k408_41_c1_15227_16558 426
184 3300053125 Ga0500618_000061 Ga0500618_000061_93076_94407 426
185 iso_pu_bacteria 2852623160 2852626962 426
186 iso_pu_bacteria 2884933994 2884935799 426
187 iso_pu_bacteria 2896109856 2896110665 426
188 3300033179 Ga0307507_10000015 Ga0307507_10000015130 427
189 iso_pu_bacteria 2842903701 2842904604 427
190 iso_pu_bacteria 2919437846 2919439175 427
191 3300014326 Ga0157380_10246174 Ga0157380_102461741 428
192 3300025250 Ga0209026_1001025 Ga0209026_100102512 428
193 3300025298 Ga0209050_1001434 Ga0209050_10014349 428
194 3300031456 Ga0307513_10151680 Ga0307513_101516802 428
195 3300046460 Ga0495638_0000006 Ga0495638_0000006_76761_78083 428
196 3300049581 Ga0501047_0074823 Ga0501047_0074823_1407_2750 428
197 3300053153 Ga0500616_0000065 Ga0500616_0000065_54498_55820 428
198 iso_pu_bacteria 2599185184 2599477764 428
199 iso_pu_bacteria 2738541284 2738760604 428
200 iso_pu_bacteria 2775506987 2776612754 428
201 iso_pu_bacteria 2910245624 2910246634 428
202 iso_pu_bacteria 2928078545 2928079680 428
203 iso_pu_bacteria 2928147474 2928147843 428
204 iso_pu_bacteria 2932082852 2932086694 428
205 3300006844 Ga0075428_100112904 Ga0075428_1001129042 429
206 3300006847 Ga0075431_100002679 Ga0075431_10000267911 429
207 3300006880 Ga0075429_100006942 Ga0075429_1000069424 429
208 3300025261 Ga0209233_1003498 Ga0209233_10034983 429
209 3300030521 Ga0307511_10006500 Ga0307511_100065007 429
210 3300037312 Ga0395899_0000237 Ga0395899_0000237_25107_26432 429
211 3300050508 nmdc:mga09592_31757_c1 nmdc:mga09592_31757_c1_1814_3148 429
212 3300050510 nmdc:mga06r32_11542_c1 nmdc:mga06r32_11542_c1_1914_3248 429
213 3300005288 Ga0065714_10002468 Ga0065714_1000246825 430
214 3300005289 Ga0065704_10000216 Ga0065704_1000021633 430
215 3300005289 Ga0065704_10076256 Ga0065704_100762562 430
216 3300005290 Ga0065712_10129660 Ga0065712_101296601 430
217 3300005354 Ga0070675_100124326 Ga0070675_1001243262 430
218 3300013100 Ga0157373_10000172 Ga0157373_100001725 430
219 3300013102 Ga0157371_10002083 Ga0157371_100020836 430
220 3300013102 Ga0157371_10003097 Ga0157371_100030973 430
221 3300014326 Ga0157380_10310035 Ga0157380_103100351 430
222 3300031911 Ga0307412_10000009 Ga0307412_10000009367 430
223 3300032004 Ga0307414_10000207 Ga0307414_100002078 430
224 3300053093 Ga0500651_0000118 Ga0500651_0000118_9472_10839 430
225 3300005290 Ga0065712_10110977 Ga0065712_101109772 431
226 3300005295 Ga0065707_10090186 Ga0065707_100901862 431
227 3300005353 Ga0070669_100001284 Ga0070669_1000012849 431
228 3300005365 Ga0070688_100132312 Ga0070688_1001323121 431
229 3300005543 Ga0070672_100048522 Ga0070672_1000485223 431
230 3300005577 Ga0068857_100090498 Ga0068857_1000904983 431
231 3300005578 Ga0068854_100057273 Ga0068854_1000572732 431
232 3300005614 Ga0068856_100000271 Ga0068856_10000027129 431
233 3300005617 Ga0068859_100010940 Ga0068859_10001094011 431
234 3300005617 Ga0068859_100222822 Ga0068859_1002228222 431
235 3300005844 Ga0068862_100036137 Ga0068862_1000361374 431
236 3300006931 Ga0097620_100010940 Ga0097620_10001094011 431
237 3300006931 Ga0097620_100222822 Ga0097620_1002228222 431
238 3300009545 Ga0105237_10004197 Ga0105237_100041978 431
239 3300009553 Ga0105249_10012757 Ga0105249_100127573 431
240 3300010375 Ga0105239_10006696 Ga0105239_100066967 431
241 3300013104 Ga0157370_10021364 Ga0157370_100213642 431
242 3300013308 Ga0157375_10002891 Ga0157375_100028919 431
243 3300014326 Ga0157380_10029885 Ga0157380_100298854 431
244 3300014745 Ga0157377_10062031 Ga0157377_100620312 431
245 3300025913 Ga0207695_10055383 Ga0207695_100553832 431
246 3300025914 Ga0207671_10001723 Ga0207671_1000172310 431
247 3300025923 Ga0207681_10011254 Ga0207681_100112543 431
248 3300025925 Ga0207650_10095789 Ga0207650_100957892 431
249 3300025926 Ga0207659_10071801 Ga0207659_100718012 431
250 3300025933 Ga0207706_10235467 Ga0207706_102354671 431
251 3300025940 Ga0207691_10072576 Ga0207691_100725762 431
252 3300026078 Ga0207702_10000284 Ga0207702_1000028431 431
253 3300026118 Ga0207675_100010800 Ga0207675_1000108002 431
254 3300028380 Ga0268265_10054811 Ga0268265_100548112 431
255 3300028556 Ga0265337_1035320 Ga0265337_10353201 431
256 3300042876 Ga0451577_0007140 Ga0451577_0007140_7892_9235 431
257 3300044712 Ga0453684_0010426 Ga0453684_0010426_7889_9232 431
258 3300045051 Ga0451576_0000372 Ga0451576_0000372_96927_98270 431
259 3300049521 Ga0501298_002690 Ga0501298_002690_729_2072 431
260 3300049522 Ga0501299_008321 Ga0501299_008321_279_1622 431
261 3300049571 Ga0501034_0002226 Ga0501034_0002226_2069_3409 431
262 3300049572 Ga0501036_0068015 Ga0501036_0068015_936_2276 431
263 3300049573 Ga0501037_0018781 Ga0501037_0018781_513_1853 431
264 3300049575 Ga0501039_0018085 Ga0501039_0018085_1105_2445 431
265 3300049579 Ga0501043_0006937 Ga0501043_0006937_247_1587 431
266 3300049581 Ga0501047_0059438 Ga0501047_0059438_28_1368 431
267 3300049649 Ga0501198_004483 Ga0501198_004483_420_1763 431
268 3300049651 Ga0501201_000855 Ga0501201_000855_1489_2832 431
269 3300049654 Ga0501207_000621 Ga0501207_000621_2672_4015 431
270 3300049661 Ga0501217_001182 Ga0501217_001182_727_2070 431
271 3300049662 Ga0501222_000425 Ga0501222_000425_3087_4430 431
272 3300049675 Ga0501243_004904 Ga0501243_004904_327_1670 431
273 3300049688 Ga0501259_000357 Ga0501259_000357_5779_7122 431
274 3300049704 Ga0501221_000233 Ga0501221_000233_6610_7953 431
275 3300049705 Ga0501225_0014996 Ga0501225_0014996_481_1824 431
276 3300049822 Ga0501035_0003921 Ga0501035_0003921_4215_5555 431
277 3300049823 Ga0501044_0016924 Ga0501044_0016924_3867_5207 431
278 3300049823 Ga0501044_0108917 Ga0501044_0108917_921_2261 431
279 3300050511 nmdc:mga08y16_13852_c1 nmdc:mga08y16_13852_c1_254_1597 431
280 3300001990 JGI24737J22298_10000250 JGI24737J22298_1000025011 432
281 3300002067 JGI24735J21928_10000014 JGI24735J21928_10000014116 432
282 3300003316 rootH1_10032414 rootH1_100324146 432
283 3300003320 rootH2_10139311 rootH2_101393111 432
284 3300003323 rootH1_10269910 rootH1_102699102 432
285 3300005288 Ga0065714_10004629 Ga0065714_100046296 432
286 3300005614 Ga0068856_100013921 Ga0068856_1000139212 432
287 3300009093 Ga0105240_10071074 Ga0105240_100710743 432
288 3300009093 Ga0105240_10128636 Ga0105240_101286362 432
289 3300010375 Ga0105239_10000013 Ga0105239_10000013240 432
290 3300010375 Ga0105239_10004499 Ga0105239_100044993 432
291 3300013105 Ga0157369_10024625 Ga0157369_100246253 432
292 3300013306 Ga0163162_10036541 Ga0163162_100365412 432
293 3300013307 Ga0157372_10027409 Ga0157372_100274093 432
294 3300021384 Ga0213876_10004555 Ga0213876_100045552 432
295 3300025272 Ga0209455_1012000 Ga0209455_10120002 432
296 3300025913 Ga0207695_10104413 Ga0207695_101044131 432
297 3300031507 Ga0307509_10028648 Ga0307509_100286483 432
298 3300031727 Ga0316576_10030745 Ga0316576_100307452 432
299 3300039437 Ga0436365_1584543 Ga0436365_1584543_21694_23037 432
300 3300042876 Ga0451577_0018351 Ga0451577_0018351_2886_4229 432
301 3300042876 Ga0451577_0142227 Ga0451577_0142227_411_1754 432
302 3300044673 Ga0453683_0000136 Ga0453683_0000136_39629_40972 432
303 3300044673 Ga0453683_0017943 Ga0453683_0017943_1959_3302 432
304 3300044673 Ga0453683_0117082 Ga0453683_0117082_283_1626 432
305 3300044712 Ga0453684_0000557 Ga0453684_0000557_77208_78551 432
306 3300044712 Ga0453684_0034931 Ga0453684_0034931_5570_6913 432
307 3300046462 Ga0495651_0056679 Ga0495651_0056679_343_1674 432
308 3300046471 Ga0495650_0000003 Ga0495650_0000003_58674_60005 432
309 3300046492 Ga0495585_0000652 Ga0495585_0000652_1784_3115 432
310 3300046506 Ga0495583_0016594 Ga0495583_0016594_1124_2455 432
311 3300046507 Ga0495606_0000145 Ga0495606_0000145_6956_8287 432
312 3300046512 Ga0495610_0001383 Ga0495610_0001383_12715_14046 432
313 3300046513 Ga0495616_0005863 Ga0495616_0005863_4759_6090 432
314 3300046558 Ga0495633_0003411 Ga0495633_0003411_270_1601 432
315 3300046660 Ga0495625_0000005 Ga0495625_0000005_176242_177573 432
316 3300046665 Ga0495661_0069950 Ga0495661_0069950_33_1364 432
317 3300046694 Ga0495649_0000003 Ga0495649_0000003_176263_177594 432
318 3300047443 Ga0495687_000833 Ga0495687_000833_30900_32231 432

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

83

207

0.88

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

280

442

0.82

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

351

474

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8595 38 397
4had-assembly1.cif.gz_C crystal structure of probable oxidoreductase protein from rhizobium etli cfn 42 0.8526 38 403
7bvj-assembly3.cif.gz_C udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8511 38 397
4had-assembly1.cif.gz_D crystal structure of probable oxidoreductase protein from rhizobium etli cfn 42 0.8488 38 403
4had-assembly1.cif.gz_C crystal structure of probable oxidoreductase protein from rhizobium etli cfn 42 0.8477 38 403
ID Description Score Start End Superfamily
af_Q2G1E6_2_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 38 159 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9131 39 161 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9119 38 159 3.40.50.720
af_P75931_1_120_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9075 38 161 3.40.50.720
af_P39353_1_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9003 39 161 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A644YXV6-F1-model_v4 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase 0.9551 111 432 GO:0000166
AF-A0A117M0K8-F1-model_v4 Tat (Twin-arginine translocation) pathway signal sequence 0.9538 145 432
AF-A0A518DRJ1-F1-model_v4 Inositol 2-dehydrogenase (EC 1.1.1.18) 0.9383 36 432 GO:0000166
GO:0050112
AF-A0A455UKN8-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9376 38 162 GO:0000166
AF-A0A1W9LA85-F1-model_v4 Oxidoreductase 0.9331 24 285 GO:0000166

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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