F404693

General Info

Members Datasets Scaffolds Average Seq Length
318 184 636 292

Family's Representative Sequence

Representative Sequence 3300035117|Ga0373953_0021435|Ga0373953_0021435_1027_1998
Length 323
Sequence MNLPDLRHLRYFMAVAEHRHFGRAAAALHISQPPLSRAIRDLEERLGATLLARSRRRVELTPEGAHFFEQARRLAESLERAVAEVRRMAGGERGRLRIGFVSLADYGGVLPGLLKACKTAHPGVSLALREMLSPDQAVALAAGELDFGLLLPPVPGRATLEHLVVQRERFVAALPEGHRLAQGGKRARASLTMAALAGEAFVMIPREIAPGLYDIVTGLAARAGFSLTIAQEAIQMQTVVSLVSSGLGAAIVPASVANLGRRGVVYRPLADQHPALELQLAWRRGALGAAGRDFLALAKRRLAARNLARRSPDVPRGIWRGGP

Samples

Sample ID Description Type Environment
1 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
111 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
112 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
113 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
114 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
115 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
117 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
118 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
119 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
120 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
121 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
122 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
123 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
124 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
134 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
140 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
141 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
149 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
161 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
162 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
181 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
182 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.31
Rhizosphere 99.69
Stem 0
Stem Tuber 0
Unclassified 0.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373953_0021435 3300035117 Bacteria 2425
2 Ga0070676_10113793 3300005328 Bacteria 1689
3 Ga0070683_100096688 3300005329 Bacteria 2778
4 Ga0070690_100000049 3300005330 Bacteria 57074
5 Ga0068869_100005690 3300005334 Bacteria 7862
6 Ga0068869_100157917 3300005334 Bacteria 1764
7 Ga0070680_100001101 3300005336 Bacteria 19393
8 Ga0070680_100010905 3300005336 Bacteria 7021
9 Ga0070682_100008419 3300005337 Bacteria 5818
10 Ga0068868_100000087 3300005338 Bacteria 56475
11 Ga0068868_100204800 3300005338 Bacteria 1646
12 Ga0070689_100000249 3300005340 Bacteria 31452
13 Ga0070689_100051938 3300005340 Bacteria 3170
14 Ga0070691_10198802 3300005341 Bacteria 1052
15 Ga0070687_100001636 3300005343 Bacteria 7993
16 Ga0070687_100028560 3300005343 Bacteria 2707
17 Ga0070687_100187101 3300005343 Bacteria 1245
18 Ga0070668_100053123 3300005347 Bacteria 3125
19 Ga0070669_100004670 3300005353 Bacteria 9888
20 Ga0070675_100538200 3300005354 Bacteria 1055
21 Ga0070674_100124731 3300005356 Bacteria 1911
22 Ga0070673_100122232 3300005364 Bacteria 2174
23 Ga0070673_100173839 3300005364 Bacteria 1840
24 Ga0070688_100076495 3300005365 Bacteria 2154
25 Ga0070688_100268991 3300005365 Bacteria 1220
26 Ga0070701_10000703 3300005438 Bacteria 11831
27 Ga0070705_100000060 3300005440 Bacteria 56895
28 Ga0070700_100000293 3300005441 Bacteria 26344
29 Ga0070700_100000630 3300005441 Bacteria 17495
30 Ga0070700_100042386 3300005441 Bacteria 2794
31 Ga0070700_100111759 3300005441 Bacteria 1817
32 Ga0070694_100000591 3300005444 Bacteria 20014
33 Ga0070694_100013746 3300005444 Bacteria 5061
34 Ga0070694_100067152 3300005444 Bacteria 2461
35 Ga0070694_100139769 3300005444 Bacteria 1757
36 Ga0070681_10002528 3300005458 Bacteria 16770
37 Ga0070681_10039524 3300005458 Bacteria 4729
38 Ga0068867_100000199 3300005459 Bacteria 39822
39 Ga0068867_100000589 3300005459 Bacteria 24060
40 Ga0068867_100350860 3300005459 Bacteria 1231
41 Ga0070685_10218232 3300005466 Bacteria 1248
42 Ga0070699_100011579 3300005518 Bacteria 7615
43 Ga0070679_100027982 3300005530 Bacteria 5555
44 Ga0070679_100076093 3300005530 Bacteria 3346
45 Ga0070684_100119529 3300005535 Bacteria 2370
46 Ga0070686_100000446 3300005544 Bacteria 25626
47 Ga0070686_100013770 3300005544 Bacteria 4639
48 Ga0070695_100000012 3300005545 Bacteria 69784
49 Ga0070695_100065592 3300005545 Bacteria 2365
50 Ga0070695_100090001 3300005545 Bacteria 2047
51 Ga0070695_100178564 3300005545 Bacteria 1503
52 Ga0070696_100000264 3300005546 Bacteria 31689
53 Ga0070696_100001511 3300005546 Bacteria 15284
54 Ga0070696_100031006 3300005546 Bacteria 3663
55 Ga0070696_100186530 3300005546 Bacteria 1541
56 Ga0070693_100000027 3300005547 Bacteria 56179
57 Ga0070693_100141949 3300005547 Bacteria 1513
58 Ga0070704_100000170 3300005549 Bacteria 25888
59 Ga0070704_100056650 3300005549 Bacteria 2784
60 Ga0068855_100010275 3300005563 Bacteria 11289
61 Ga0068854_100035586 3300005578 Bacteria 3486
62 Ga0068854_100310355 3300005578 Bacteria 1279
63 Ga0068856_100058223 3300005614 Bacteria 3816
64 Ga0070702_100000599 3300005615 Bacteria 13230
65 Ga0068852_100225530 3300005616 Bacteria 1784
66 Ga0068859_100000392 3300005617 Bacteria 43640
67 Ga0068859_100061719 3300005617 Bacteria 3777
68 Ga0068859_100101309 3300005617 Bacteria 2937
69 Ga0068866_10000043 3300005718 Bacteria 48570
70 Ga0068861_100000331 3300005719 Bacteria 26725
71 Ga0068861_100001807 3300005719 Bacteria 13779
72 Ga0068861_100173687 3300005719 Bacteria 1788
73 Ga0068870_10045791 3300005840 Bacteria 2292
74 Ga0068858_100001435 3300005842 Bacteria 24513
75 Ga0068860_100003708 3300005843 Bacteria 15716
76 Ga0068860_100083263 3300005843 Bacteria 3042
77 Ga0068862_100000274 3300005844 Bacteria 57686
78 Ga0068862_100001087 3300005844 Bacteria 25912
79 Ga0068862_100027158 3300005844 Bacteria 4817
80 Ga0068862_100478932 3300005844 Bacteria 1178
81 Ga0081539_10001356 3300005985 Bacteria 42605
82 Ga0070715_10038488 3300006163 Bacteria 1986
83 Ga0097621_100001287 3300006237 Bacteria 17257
84 Ga0097621_100001352 3300006237 Bacteria 16880
85 Ga0068871_100072909 3300006358 Bacteria 2829
86 Ga0075428_100000433 3300006844 Bacteria 41623
87 Ga0075428_100037988 3300006844 Bacteria 5299
88 Ga0075428_100132786 3300006844 Bacteria 2707
89 Ga0075430_100003888 3300006846 Bacteria 12579
90 Ga0075430_100010428 3300006846 Bacteria 7866
91 Ga0075430_100122448 3300006846 Bacteria 2168
92 Ga0075431_100044964 3300006847 Bacteria 4552
93 Ga0075431_100099106 3300006847 Bacteria 3008
94 Ga0075433_10000369 3300006852 Bacteria 28286
95 Ga0075434_100000187 3300006871 Bacteria 40764
96 Ga0075434_100001022 3300006871 Bacteria 22777
97 Ga0075434_100317815 3300006871 Bacteria 1577
98 Ga0075429_100000037 3300006880 Bacteria 62099
99 Ga0075429_100026413 3300006880 Bacteria 5041
100 Ga0068865_100005996 3300006881 Bacteria 7402
101 Ga0075436_100000899 3300006914 Bacteria 19772
102 Ga0075436_100016561 3300006914 Bacteria 5046
103 Ga0075436_100121466 3300006914 Bacteria 1828
104 Ga0097620_100000392 3300006931 Bacteria 43640
105 Ga0097620_100061717 3300006931 Bacteria 3777
106 Ga0097620_100101314 3300006931 Bacteria 2937
107 Ga0075435_100000126 3300007076 Bacteria 43549
108 Ga0075435_100011178 3300007076 Bacteria 6587
109 Ga0075435_100013976 3300007076 Bacteria 5987
110 Ga0099794_10001777 3300007265 Bacteria 7682
111 Ga0099794_10105404 3300007265 Bacteria 1410
112 Ga0111539_10039019 3300009094 Bacteria 5727
113 Ga0111539_10045011 3300009094 Bacteria 5284
114 Ga0111539_10055258 3300009094 Bacteria 4720
115 Ga0111539_10168046 3300009094 Bacteria 2563
116 Ga0111539_10414151 3300009094 Bacteria 1569
117 Ga0105245_10000177 3300009098 Bacteria 60854
118 Ga0114129_10001488 3300009147 Bacteria 31713
119 Ga0114129_10557794 3300009147 Bacteria 1489
120 Ga0105243_10003048 3300009148 Bacteria 13815
121 Ga0105242_10000061 3300009176 Bacteria 75148
122 Ga0105242_10000867 3300009176 Bacteria 23483
123 Ga0105249_10003246 3300009553 Bacteria 14082
124 Ga0105239_10051234 3300010375 Bacteria 4526
125 Ga0157378_10000685 3300013297 Bacteria 31864
126 Ga0163162_10115946 3300013306 Bacteria 2779
127 Ga0157372_10402772 3300013307 Bacteria 1594
128 Ga0157375_10275430 3300013308 Bacteria 1845
129 Ga0157380_10015471 3300014326 Bacteria 5609
130 Ga0157380_10053248 3300014326 Bacteria 3208
131 Ga0157379_10251084 3300014968 Bacteria 1606
132 Ga0157376_10021945 3300014969 Bacteria 4967
133 Ga0157376_10046315 3300014969 Bacteria 3586
134 Ga0207653_10011203 3300025885 Bacteria 2798
135 Ga0207642_10017347 3300025899 Bacteria 2736
136 Ga0207647_10300716 3300025904 Bacteria 914
137 Ga0207685_10037971 3300025905 Bacteria 1777
138 Ga0207643_10006012 3300025908 Bacteria 6486
139 Ga0207643_10047994 3300025908 Bacteria 2418
140 Ga0207707_10003550 3300025912 Bacteria 13810
141 Ga0207660_10005071 3300025917 Bacteria 8577
142 Ga0207660_10156073 3300025917 Bacteria 1757
143 Ga0207662_10000029 3300025918 Bacteria 65163
144 Ga0207662_10056341 3300025918 Bacteria 2347
145 Ga0207662_10056620 3300025918 Bacteria 2342
146 Ga0207662_10073552 3300025918 Bacteria 2073
147 Ga0207662_10178604 3300025918 Bacteria 1365
148 Ga0207652_10029063 3300025921 Bacteria 4617
149 Ga0207652_10202558 3300025921 Bacteria 1786
150 Ga0207681_10000912 3300025923 Bacteria 19295
151 Ga0207687_10000628 3300025927 Bacteria 23816
152 Ga0207686_10004447 3300025934 Bacteria 7512
153 Ga0207686_10014286 3300025934 Bacteria 4415
154 Ga0207709_10001598 3300025935 Bacteria 15441
155 Ga0207709_10001706 3300025935 Bacteria 14799
156 Ga0207670_10002227 3300025936 Bacteria 10141
157 Ga0207670_10402047 3300025936 Bacteria 1095
158 Ga0207704_10000150 3300025938 Bacteria 37227
159 Ga0207704_10000892 3300025938 Bacteria 13241
160 Ga0207711_10122036 3300025941 Bacteria 2327
161 Ga0207689_10000209 3300025942 Bacteria 51679
162 Ga0207689_10169375 3300025942 Bacteria 1800
163 Ga0207667_10008829 3300025949 Bacteria 11929
164 Ga0207651_10126612 3300025960 Bacteria 1947
165 Ga0207712_10077443 3300025961 Bacteria 2410
166 Ga0207712_10085201 3300025961 Bacteria 2311
167 Ga0207668_10031287 3300025972 Bacteria 3503
168 Ga0207640_10023572 3300025981 Bacteria 3701
169 Ga0207640_10338044 3300025981 Bacteria 1205
170 Ga0207677_10005498 3300026023 Bacteria 6881
171 Ga0207703_10014663 3300026035 Bacteria 6116
172 Ga0207703_10047071 3300026035 Bacteria 3476
173 Ga0207708_10000189 3300026075 Bacteria 48580
174 Ga0207708_10003009 3300026075 Bacteria 12422
175 Ga0207708_10090871 3300026075 Bacteria 2354
176 Ga0207708_10167414 3300026075 Bacteria 1738
177 Ga0207702_10479512 3300026078 Bacteria 1210
178 Ga0207648_10000055 3300026089 Bacteria 106101
179 Ga0207648_10000242 3300026089 Bacteria 58883
180 Ga0207675_100000188 3300026118 Bacteria 56065
181 Ga0207675_100003332 3300026118 Bacteria 15727
182 Ga0207675_100211710 3300026118 Bacteria 1864
183 Ga0207683_10555411 3300026121 Bacteria 1062
184 Ga0209588_1067135 3300027671 Bacteria 1159
185 Ga0207428_10003824 3300027907 Bacteria 14441
186 Ga0207428_10049152 3300027907 Bacteria 3381
187 Ga0207428_10055381 3300027907 Bacteria 3153
188 Ga0268265_10003713 3300028380 Bacteria 10858
189 Ga0268265_10006516 3300028380 Bacteria 7912
190 Ga0268265_10092829 3300028380 Bacteria 2417
191 Ga0268265_10402106 3300028380 Unclassified 1266
192 Ga0268264_10001818 3300028381 Bacteria 19514
193 Ga0268264_10130315 3300028381 Bacteria 2228
194 Ga0307408_100017741 3300031548 Bacteria 4769
195 Ga0307405_10145722 3300031731 Bacteria 1658
196 Ga0307411_10086402 3300032005 Bacteria 2176
197 Ga0373958_0015235 3300034819 Bacteria 1355
198 Ga0373926_0000079 3300035083 Bacteria 18567
199 Ga0373928_0009793 3300035084 Bacteria 1876
200 Ga0373940_0004376 3300035088 Bacteria 2981
201 Ga0373949_0060843 3300035090 Bacteria 971
202 Ga0373923_0157055 3300035111 Bacteria 1036
203 Ga0373923_0165201 3300035111 Bacteria 1011
204 Ga0373939_0002070 3300035114 Bacteria 4784
205 Ga0373939_0037343 3300035114 Bacteria 1442
206 Ga0373941_0003007 3300035115 Bacteria 3776
207 Ga0373945_0010172 3300035116 Bacteria 3093
208 Ga0373945_0027773 3300035116 Bacteria 1978
209 Ga0373954_0000535 3300035118 Bacteria 14204
210 Ga0373957_0078715 3300035120 Bacteria 1299
211 Ga0373943_0180255 3300035170 Bacteria 1160
212 Ga0373942_0002461 3300035207 Bacteria 4490
213 Ga0373942_0046468 3300035207 Bacteria 1203
214 Ga0373961_0019161 3300035241 Bacteria 1795
215 Ga0373961_0029722 3300035241 Bacteria 1515
216 Ga0373924_0017408 3300035410 Bacteria 2757
217 Ga0373924_0022331 3300035410 Bacteria 2474
218 Ga0373931_0000859 3300035691 Bacteria 12815
219 Ga0373931_0004697 3300035691 Bacteria 6254
220 Ga0373931_0013407 3300035691 Bacteria 3991
221 Ga0373931_0090950 3300035691 Bacteria 1700
222 Ga0373935_0112919 3300035692 Bacteria 1805
223 Ga0373927_0006580 3300035695 Bacteria 7915
224 Ga0373927_0009031 3300035695 Bacteria 6693
225 Ga0373933_0117946 3300035724 Bacteria 1660
226 Ga0373947_0058157 3300035725 Bacteria 2342
227 Ga0373937_0000145 3300036401 Bacteria 68629
228 Ga0373937_0098202 3300036401 Bacteria 2716
229 Ga0373937_0327842 3300036401 Bacteria 1449
230 Ga0373937_0403086 3300036401 Bacteria 1298
231 Ga0373925_0019478 3300037068 Bacteria 4936
232 Ga0436360_0792004 3300039438 Bacteria 2481
233 Ga0451807_0092065 3300041486 Bacteria 2389
234 Ga0439441_000176 3300042001 Bacteria 5703
235 Ga0466963_0182807 3300044694 Bacteria 1464
236 Ga0466964_0019078 3300044706 Bacteria 2635
237 Ga0451576_0003615 3300045051 Bacteria 21012
238 Ga0451576_0015211 3300045051 Bacteria 8533
239 Ga0451576_0029661 3300045051 Bacteria 5852
240 Ga0451576_0081098 3300045051 Bacteria 3374
241 Ga0451576_0214266 3300045051 Bacteria 2011
242 Ga0466967_0000299 3300045976 Bacteria 22210
243 Ga0495592_0000208 3300046454 Bacteria 50220
244 Ga0495580_0000377 3300046472 Bacteria 36420
245 Ga0495662_0019107 3300046476 Bacteria 3316
246 Ga0495608_0002374 3300046511 Bacteria 13547
247 Ga0495618_0015073 3300046514 Bacteria 4715
248 Ga0495628_0001270 3300046516 Bacteria 23088
249 Ga0495630_0008087 3300046517 Bacteria 7560
250 Ga0495630_0013797 3300046517 Bacteria 5875
251 Ga0495666_0039330 3300046526 Bacteria 2296
252 Ga0495642_0013520 3300046528 Bacteria 3159
253 Ga0495665_0019013 3300046531 Bacteria 3692
254 Ga0495640_0015586 3300046533 Bacteria 5713
255 Ga0495640_0141548 3300046533 Bacteria 1550
256 Ga0495586_0002833 3300046535 Bacteria 9368
257 Ga0495586_0150700 3300046535 Bacteria 1308
258 Ga0495621_0007938 3300046539 Bacteria 3161
259 Ga0495621_0014247 3300046539 Bacteria 2513
260 Ga0495621_0028765 3300046539 Bacteria 1891
261 Ga0495621_0075038 3300046539 Bacteria 1252
262 Ga0495645_0121865 3300046543 Bacteria 1835
263 Ga0495634_0006900 3300046642 Bacteria 8583
264 Ga0495635_0321737 3300046663 Bacteria 1035
265 Ga0495647_0003252 3300046681 Bacteria 5199
266 Ga0495658_0008145 3300046683 Bacteria 5190
267 Ga0495669_0004340 3300046684 Bacteria 5853
268 Ga0495613_0009125 3300046689 Bacteria 7354
269 Ga0495581_0036430 3300047315 Bacteria 2847
270 Ga0495604_0001095 3300047317 Bacteria 22480
271 Ga0495636_0004083 3300047318 Bacteria 5713
272 Ga0495680_0000180 3300047322 Bacteria 66863
273 Ga0495684_0149380 3300047471 Bacteria 1748
274 Ga0501039_0230479 3300049575 Bacteria 1456
275 Ga0501048_0068176 3300049582 Bacteria 2514
276 Ga0501071_0000636 3300049587 Bacteria 18262
277 Ga0501071_0149083 3300049587 Bacteria 1744
278 Ga0501072_0008124 3300049588 Bacteria 7964
279 Ga0501072_0046328 3300049588 Bacteria 3422
280 Ga0501072_0094303 3300049588 Bacteria 2378
281 Ga0501073_0184675 3300049589 Bacteria 1443
282 Ga0501074_0052156 3300049590 Bacteria 2953
283 Ga0501074_0213345 3300049590 Bacteria 1375
284 Ga0501075_0015079 3300049591 Bacteria 5545
285 Ga0501075_0283982 3300049591 Bacteria 1261
286 Ga0501080_0003945 3300049742 Bacteria 13138
287 Ga0501080_0052217 3300049742 Bacteria 3805
288 Ga0501081_0091872 3300049743 Bacteria 2135
289 nmdc:mga05p37_387_c1 3300050507 Bacteria 47694
290 nmdc:mga09592_167897_c1 3300050508 Bacteria 1897
291 nmdc:mga09592_171771_c1 3300050508 Bacteria 1874
292 nmdc:mga09592_212_c1 3300050508 Bacteria 41841
293 nmdc:mga09592_531903_c1 3300050508 Bacteria 1010
294 nmdc:mga0qj67_111227_c1 3300050509 Bacteria 2212
295 nmdc:mga0qj67_13881_c1 3300050509 Bacteria 6082
296 nmdc:mga0qj67_23433_c1 3300050509 Bacteria 4750
297 nmdc:mga0qj67_5766_c1 3300050509 Bacteria 9063
298 nmdc:mga06r32_149882_c1 3300050510 Bacteria 2310
299 nmdc:mga06r32_225883_c1 3300050510 Bacteria 1861
300 nmdc:mga06r32_275839_c1 3300050510 Bacteria 1669
301 nmdc:mga06r32_48564_c1 3300050510 Bacteria 4057
302 nmdc:mga08y16_12981_c1 3300050511 Bacteria 8765
303 nmdc:mga08y16_18585_c1 3300050511 Bacteria 7323
304 nmdc:mga08y16_24378_c1 3300050511 Bacteria 6385
305 nmdc:mga0n895_51252_c1 3300050512 Bacteria 4049
306 nmdc:mga0n895_58_c1 3300050512 Bacteria 65261
307 nmdc:mga0n895_619_c1 3300050512 Bacteria 24714
308 nmdc:mga0rr50_121087_c1 3300050513 Bacteria 2083
309 nmdc:mga0rr50_12556_c1 3300050513 Bacteria 5482
310 nmdc:mga0rr50_254800_c1 3300050513 Bacteria 1458
311 nmdc:mga0rr50_3841_c1 3300050513 Bacteria 8723
312 nmdc:mga0rr50_50046_c1 3300050513 Bacteria 3095
313 nmdc:mga08x19_2080_c1 3300050514 Bacteria 12243
314 nmdc:mga08x19_727_c1 3300050514 Bacteria 21023
315 nmdc:mga0a205_4300_c1 3300050515 Bacteria 12783
316 Ga0495601_0075157 3300053077 Bacteria 2163
317 Ga0495619_0181285 3300053085 Bacteria 1457
318 Ga0501084_0020258 3300054114 Bacteria 5545
319 Ga0373953_0021435
320 Ga0070676_10113793
321 Ga0070683_100096688
322 Ga0070690_100000049
323 Ga0068869_100005690
324 Ga0068869_100157917
325 Ga0070680_100001101
326 Ga0070680_100010905
327 Ga0070682_100008419
328 Ga0068868_100000087
329 Ga0068868_100204800
330 Ga0070689_100000249
331 Ga0070689_100051938
332 Ga0070691_10198802
333 Ga0070687_100001636
334 Ga0070687_100028560
335 Ga0070687_100187101
336 Ga0070668_100053123
337 Ga0070669_100004670
338 Ga0070675_100538200
339 Ga0070674_100124731
340 Ga0070673_100122232
341 Ga0070673_100173839
342 Ga0070688_100076495
343 Ga0070688_100268991
344 Ga0070701_10000703
345 Ga0070705_100000060
346 Ga0070700_100000293
347 Ga0070700_100000630
348 Ga0070700_100042386
349 Ga0070700_100111759
350 Ga0070694_100000591
351 Ga0070694_100013746
352 Ga0070694_100067152
353 Ga0070694_100139769
354 Ga0070681_10002528
355 Ga0070681_10039524
356 Ga0068867_100000199
357 Ga0068867_100000589
358 Ga0068867_100350860
359 Ga0070685_10218232
360 Ga0070699_100011579
361 Ga0070679_100027982
362 Ga0070679_100076093
363 Ga0070684_100119529
364 Ga0070686_100000446
365 Ga0070686_100013770
366 Ga0070695_100000012
367 Ga0070695_100065592
368 Ga0070695_100090001
369 Ga0070695_100178564
370 Ga0070696_100000264
371 Ga0070696_100001511
372 Ga0070696_100031006
373 Ga0070696_100186530
374 Ga0070693_100000027
375 Ga0070693_100141949
376 Ga0070704_100000170
377 Ga0070704_100056650
378 Ga0068855_100010275
379 Ga0068854_100035586
380 Ga0068854_100310355
381 Ga0068856_100058223
382 Ga0070702_100000599
383 Ga0068852_100225530
384 Ga0068859_100000392
385 Ga0068859_100061719
386 Ga0068859_100101309
387 Ga0068866_10000043
388 Ga0068861_100000331
389 Ga0068861_100001807
390 Ga0068861_100173687
391 Ga0068870_10045791
392 Ga0068858_100001435
393 Ga0068860_100003708
394 Ga0068860_100083263
395 Ga0068862_100000274
396 Ga0068862_100001087
397 Ga0068862_100027158
398 Ga0068862_100478932
399 Ga0081539_10001356
400 Ga0070715_10038488
401 Ga0097621_100001287
402 Ga0097621_100001352
403 Ga0068871_100072909
404 Ga0075428_100000433
405 Ga0075428_100037988
406 Ga0075428_100132786
407 Ga0075430_100003888
408 Ga0075430_100010428
409 Ga0075430_100122448
410 Ga0075431_100044964
411 Ga0075431_100099106
412 Ga0075433_10000369
413 Ga0075434_100000187
414 Ga0075434_100001022
415 Ga0075434_100317815
416 Ga0075429_100000037
417 Ga0075429_100026413
418 Ga0068865_100005996
419 Ga0075436_100000899
420 Ga0075436_100016561
421 Ga0075436_100121466
422 Ga0097620_100000392
423 Ga0097620_100061717
424 Ga0097620_100101314
425 Ga0075435_100000126
426 Ga0075435_100011178
427 Ga0075435_100013976
428 Ga0099794_10001777
429 Ga0099794_10105404
430 Ga0111539_10039019
431 Ga0111539_10045011
432 Ga0111539_10055258
433 Ga0111539_10168046
434 Ga0111539_10414151
435 Ga0105245_10000177
436 Ga0114129_10001488
437 Ga0114129_10557794
438 Ga0105243_10003048
439 Ga0105242_10000061
440 Ga0105242_10000867
441 Ga0105249_10003246
442 Ga0105239_10051234
443 Ga0157378_10000685
444 Ga0163162_10115946
445 Ga0157372_10402772
446 Ga0157375_10275430
447 Ga0157380_10015471
448 Ga0157380_10053248
449 Ga0157379_10251084
450 Ga0157376_10021945
451 Ga0157376_10046315
452 Ga0207653_10011203
453 Ga0207642_10017347
454 Ga0207647_10300716
455 Ga0207685_10037971
456 Ga0207643_10006012
457 Ga0207643_10047994
458 Ga0207707_10003550
459 Ga0207660_10005071
460 Ga0207660_10156073
461 Ga0207662_10000029
462 Ga0207662_10056341
463 Ga0207662_10056620
464 Ga0207662_10073552
465 Ga0207662_10178604
466 Ga0207652_10029063
467 Ga0207652_10202558
468 Ga0207681_10000912
469 Ga0207687_10000628
470 Ga0207686_10004447
471 Ga0207686_10014286
472 Ga0207709_10001598
473 Ga0207709_10001706
474 Ga0207670_10002227
475 Ga0207670_10402047
476 Ga0207704_10000150
477 Ga0207704_10000892
478 Ga0207711_10122036
479 Ga0207689_10000209
480 Ga0207689_10169375
481 Ga0207667_10008829
482 Ga0207651_10126612
483 Ga0207712_10077443
484 Ga0207712_10085201
485 Ga0207668_10031287
486 Ga0207640_10023572
487 Ga0207640_10338044
488 Ga0207677_10005498
489 Ga0207703_10014663
490 Ga0207703_10047071
491 Ga0207708_10000189
492 Ga0207708_10003009
493 Ga0207708_10090871
494 Ga0207708_10167414
495 Ga0207702_10479512
496 Ga0207648_10000055
497 Ga0207648_10000242
498 Ga0207675_100000188
499 Ga0207675_100003332
500 Ga0207675_100211710
501 Ga0207683_10555411
502 Ga0209588_1067135
503 Ga0207428_10003824
504 Ga0207428_10049152
505 Ga0207428_10055381
506 Ga0268265_10003713
507 Ga0268265_10006516
508 Ga0268265_10092829
509 Ga0268265_10402106
510 Ga0268264_10001818
511 Ga0268264_10130315
512 Ga0307408_100017741
513 Ga0307405_10145722
514 Ga0307411_10086402
515 Ga0373958_0015235
516 Ga0373926_0000079
517 Ga0373928_0009793
518 Ga0373940_0004376
519 Ga0373949_0060843
520 Ga0373923_0157055
521 Ga0373923_0165201
522 Ga0373939_0002070
523 Ga0373939_0037343
524 Ga0373941_0003007
525 Ga0373945_0010172
526 Ga0373945_0027773
527 Ga0373954_0000535
528 Ga0373957_0078715
529 Ga0373943_0180255
530 Ga0373942_0002461
531 Ga0373942_0046468
532 Ga0373961_0019161
533 Ga0373961_0029722
534 Ga0373924_0017408
535 Ga0373924_0022331
536 Ga0373931_0000859
537 Ga0373931_0004697
538 Ga0373931_0013407
539 Ga0373931_0090950
540 Ga0373935_0112919
541 Ga0373927_0006580
542 Ga0373927_0009031
543 Ga0373933_0117946
544 Ga0373947_0058157
545 Ga0373937_0000145
546 Ga0373937_0098202
547 Ga0373937_0327842
548 Ga0373937_0403086
549 Ga0373925_0019478
550 Ga0436360_0792004
551 Ga0451807_0092065
552 Ga0439441_000176
553 Ga0466963_0182807
554 Ga0466964_0019078
555 Ga0451576_0003615
556 Ga0451576_0015211
557 Ga0451576_0029661
558 Ga0451576_0081098
559 Ga0451576_0214266
560 Ga0466967_0000299
561 Ga0495592_0000208
562 Ga0495580_0000377
563 Ga0495662_0019107
564 Ga0495608_0002374
565 Ga0495618_0015073
566 Ga0495628_0001270
567 Ga0495630_0008087
568 Ga0495630_0013797
569 Ga0495666_0039330
570 Ga0495642_0013520
571 Ga0495665_0019013
572 Ga0495640_0015586
573 Ga0495640_0141548
574 Ga0495586_0002833
575 Ga0495586_0150700
576 Ga0495621_0007938
577 Ga0495621_0014247
578 Ga0495621_0028765
579 Ga0495621_0075038
580 Ga0495645_0121865
581 Ga0495634_0006900
582 Ga0495635_0321737
583 Ga0495647_0003252
584 Ga0495658_0008145
585 Ga0495669_0004340
586 Ga0495613_0009125
587 Ga0495581_0036430
588 Ga0495604_0001095
589 Ga0495636_0004083
590 Ga0495680_0000180
591 Ga0495684_0149380
592 Ga0501039_0230479
593 Ga0501048_0068176
594 Ga0501071_0000636
595 Ga0501071_0149083
596 Ga0501072_0008124
597 Ga0501072_0046328
598 Ga0501072_0094303
599 Ga0501073_0184675
600 Ga0501074_0052156
601 Ga0501074_0213345
602 Ga0501075_0015079
603 Ga0501075_0283982
604 Ga0501080_0003945
605 Ga0501080_0052217
606 Ga0501081_0091872
607 nmdc:mga05p37_387_c1
608 nmdc:mga09592_167897_c1
609 nmdc:mga09592_171771_c1
610 nmdc:mga09592_212_c1
611 nmdc:mga09592_531903_c1
612 nmdc:mga0qj67_111227_c1
613 nmdc:mga0qj67_13881_c1
614 nmdc:mga0qj67_23433_c1
615 nmdc:mga0qj67_5766_c1
616 nmdc:mga06r32_149882_c1
617 nmdc:mga06r32_225883_c1
618 nmdc:mga06r32_275839_c1
619 nmdc:mga06r32_48564_c1
620 nmdc:mga08y16_12981_c1
621 nmdc:mga08y16_18585_c1
622 nmdc:mga08y16_24378_c1
623 nmdc:mga0n895_51252_c1
624 nmdc:mga0n895_58_c1
625 nmdc:mga0n895_619_c1
626 nmdc:mga0rr50_121087_c1
627 nmdc:mga0rr50_12556_c1
628 nmdc:mga0rr50_254800_c1
629 nmdc:mga0rr50_3841_c1
630 nmdc:mga0rr50_50046_c1
631 nmdc:mga08x19_2080_c1
632 nmdc:mga08x19_727_c1
633 nmdc:mga0a205_4300_c1
634 Ga0495601_0075157
635 Ga0495619_0181285
636 Ga0501084_0020258

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

6

65

0.98

PF03466

LysR_substrate

LysR substrate binding domain

89

303

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o8z-assembly1.cif.gz_A conformational dynamism for dna interaction in salmonella typhimurium rcsb response regulator. 0.9059 5 48
3clo-assembly1.cif.gz_B crystal structure of putative transcriptional regulator containing a luxr dna binding domain (np_811094.1) from bacteroides thetaiotaomicron vpi-5482 at 2.04 a resolution 0.8917 4 49
6zj2-assembly3.cif.gz_M structure of rcsb from salmonella enterica serovar typhimurium bound to promoter rpra in the presence of phosphomimetic bef3- 0.8844 7 49
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.8823 4 49
7r3h-assembly2.cif.gz_C pross optimitzed variant of rhlr (75 mutations) in complex with native autoinducer c4-hsl 0.8817 3 48
ID Description Score Start End Superfamily
af_P9WPH5_284_409_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.9703 6 47 1.10.10.2840
af_O50442_408_536_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.9692 5 50 1.10.10.2840
af_P37047_258_384_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.9467 8 50 1.10.10.2840
af_P9WMF5_6_80_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9237 4 54 1.10.10.10
3ispB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.915 5 54 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A519IVZ9-F1-model_v4 deleted 0.8699 132 279
AF-A0A1B8NV40-F1-model_v4 HTH-type transcriptional regulator GltR 0.868 133 280 GO:0003677
GO:0003700
GO:0032993
AF-A0A4R7H2E3-F1-model_v4 deleted 0.8669 111 256
AF-A0A519I3J6-F1-model_v4 deleted 0.8596 140 274
AF-A0A4R7H2E3-F1-model_v4 deleted 0.856 111 256

Map