F405232

General Info

Members Datasets Scaffolds Average Seq Length
319 229 636 260

Family's Representative Sequence

Representative Sequence 3300046665|Ga0495661_0134196|Ga0495661_0134196_10_975
Length 321
Sequence MFDDGDEAFKKVGFHRAEHSGCIDLTRLFYLFGGVFPALYTTARGDNQTAGNCRVAEERKMDLGIHNKVALVMGAGGGLGGAIAQTLAKEGAKIVVADINPDALASIESALKSAGADVLALQWDLSDLAVVDDRIARIESHFGPVDILVNNTGGPPPTPAFGQPSDVWMKNFQLMVLSVIAITDRVLPGMREKNWGRIITSTSSGVVAPIANLGISNALRLSLVGWSKTLSREVAREGVTANVILPGRISTDRIRFLDEAKAKREGRNVEDVSTQSTESIPVGRYGTPQEYADVVAFLASANASYVTGTVQRVDGGLLSNI

Samples

Sample ID Description Type Environment
1 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
12 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
42 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
56 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
80 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
81 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
82 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
96 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
97 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
98 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
99 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
125 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
136 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
137 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
162 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
163 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
164 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
167 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
171 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
174 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
175 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
178 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
179 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
180 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
181 2508501050 Microvirga lupini Lut6 Isolate Nodule
182 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
183 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
184 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
185 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
186 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
187 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
188 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
189 2643221629 Devosia sp. Root105 Isolate Unclassified
190 2643221662 Devosia sp. Root413D1 Isolate Unclassified
191 2643221733 Bosea sp. Root381 Isolate Unclassified
192 2643221734 Bosea sp. Root670 Isolate Unclassified
193 2738543019 Variovorax sp. GV040 Isolate Unclassified
194 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
195 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
196 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
197 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
198 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
199 2818991467 Bosea vestrisii 3192 Isolate Unclassified
200 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
201 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
202 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
203 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
204 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
205 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
206 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
207 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
208 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
209 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
210 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
211 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
212 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
213 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
214 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
215 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
216 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
217 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
218 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
219 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
220 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
221 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
222 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
223 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
224 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
225 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
226 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
227 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule
228 8057575449 Rhizobium mayense CCGE526 Isolate Nodule
229 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.13
Metatranscriptomes 0.63
Isolates 17.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.06
Nodule 8.78
Rhizoplane 0.94
Rhizosphere 51.72
Stem 0
Stem Tuber 0
Unclassified 3.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495661_0134196 3300046665 Bacteria 1353
2 SwRhRL2b_contig_1629645 2162886007 Bacteria 1193
3 JGI25165J46597_1001378 3300003214 Bacteria 13378
4 rootH2_10025300 3300003320 Bacteria 7978
5 rootL2_10002654 3300003322 Bacteria 33800
6 rootL2_10055886 3300003322 Bacteria 22951
7 rootH1_10053178 3300003323 Bacteria 7303
8 JGI25160J50197_1000032 3300003354 Bacteria 174525
9 JGI25161J50226_1000017 3300003374 Bacteria 174525
10 Ga0006562J51391_1149412 3300003578 Bacteria 2830
11 Ga0006562J51391_1149413 3300003578 Bacteria 1310
12 Ga0055533_1000072 3300003756 Bacteria 144571
13 Ga0055532_1000013 3300003758 Bacteria 380677
14 Ga0055527_1000010 3300003760 Bacteria 380677
15 Ga0055535_1000010 3300003761 Bacteria 380677
16 Ga0055542_1000016 3300003762 Bacteria 380677
17 Ga0055542_1008273 3300003762 Bacteria 2045
18 Ga0055529_1000012 3300003763 Bacteria 380677
19 Ga0055526_1000062 3300003771 Bacteria 104151
20 Ga0055524_1000011 3300003775 Bacteria 261442
21 Ga0055543_1000039 3300004625 Bacteria 123885
22 Ga0065165_1000179 3300005262 Bacteria 112568
23 Ga0070661_100274471 3300005344 Bacteria 1306
24 Ga0070713_100289024 3300005436 Bacteria 1506
25 Ga0070663_100665222 3300005455 Bacteria 882
26 Ga0070681_10073177 3300005458 Bacteria 3389
27 Ga0070679_100404418 3300005530 Bacteria 1311
28 Ga0068853_100066164 3300005539 Bacteria 3138
29 Ga0070665_100718546 3300005548 Bacteria 1012
30 Ga0075364_10375578 3300006051 Bacteria 969
31 Ga0075369_10095110 3300006186 Bacteria 1332
32 Ga0068865_100045388 3300006881 Bacteria 3012
33 Ga0105240_10034275 3300009093 Bacteria 6550
34 Ga0105240_10105135 3300009093 Bacteria 3427
35 Ga0105240_10692168 3300009093 Unclassified 1113
36 Ga0114129_10030588 3300009147 Bacteria 7617
37 Ga0105237_10007146 3300009545 Bacteria 12269
38 Ga0105238_10002200 3300009551 Bacteria 19682
39 Ga0105238_10011630 3300009551 Bacteria 8866
40 Ga0105239_10022662 3300010375 Bacteria 6923
41 Ga0105239_10336407 3300010375 Bacteria 1703
42 Ga0157373_10000650 3300013100 Bacteria 27304
43 Ga0157370_10112760 3300013104 Bacteria 2541
44 Ga0157370_10330311 3300013104 Bacteria 1406
45 Ga0157369_10713346 3300013105 Bacteria 1033
46 Ga0171462_1010 3300013250 Bacteria 310590
47 Ga0171462_1023 3300013250 Bacteria 136797
48 Ga0171462_1054 3300013250 Bacteria 31131
49 Ga0163162_10051822 3300013306 Unclassified 4119
50 Ga0157379_10435192 3300014968 Bacteria 1209
51 Ga0183361_10007 3300016635 Bacteria 339575
52 Ga0209674_100011 3300025226 Bacteria 997175
53 Ga0209672_100002 3300025228 Bacteria 1733325
54 Ga0209147_100003 3300025229 Bacteria 1733325
55 Ga0207427_101714 3300025231 Bacteria 7254
56 Ga0209258_100042 3300025242 Bacteria 380729
57 Ga0209258_113712 3300025242 Bacteria 959
58 Ga0209148_1000006 3300025254 Bacteria 1733325
59 Ga0209148_1000602 3300025254 Bacteria 32396
60 Ga0209233_1000033 3300025261 Bacteria 596094
61 Ga0209455_1000003 3300025272 Bacteria 1471893
62 Ga0209455_1000196 3300025272 Bacteria 88682
63 Ga0209673_1007005 3300025273 Bacteria 5306
64 Ga0209130_1000035 3300025284 Bacteria 296161
65 Ga0209130_1000092 3300025284 Bacteria 149162
66 Ga0209675_1000274 3300025291 Bacteria 49492
67 Ga0209564_1000143 3300025295 Bacteria 177136
68 Ga0209256_1000111 3300025299 Bacteria 178442
69 Ga0207426_1000017 3300025302 Bacteria 577913
70 Ga0207426_1000022 3300025302 Bacteria 547377
71 Ga0209051_1000350 3300025303 Bacteria 68654
72 Ga0209257_1029456 3300025304 Bacteria 1788
73 Ga0207695_10100702 3300025913 Bacteria 2884
74 Ga0207671_10028202 3300025914 Bacteria 4197
75 Ga0207649_10276107 3300025920 Bacteria 1220
76 Ga0207694_10003188 3300025924 Bacteria 13089
77 Ga0207694_10008743 3300025924 Bacteria 7642
78 Ga0207700_10172777 3300025928 Bacteria 1804
79 Ga0207664_10719615 3300025929 Bacteria 898
80 Ga0207709_10000077 3300025935 Bacteria 169923
81 Ga0207704_10029762 3300025938 Bacteria 3051
82 Ga0207639_10024718 3300026041 Bacteria 4351
83 Ga0207639_10048401 3300026041 Bacteria 3218
84 Ga0207678_10058055 3300026067 Bacteria 3330
85 Ga0307515_10079328 3300028794 Bacteria 4302
86 Ga0307408_100001144 3300031548 Bacteria 20165
87 Ga0307408_100042958 3300031548 Bacteria 3214
88 Ga0307508_10016165 3300031616 Bacteria 6795
89 Ga0316576_10072638 3300031727 Bacteria 2540
90 Ga0307516_10026706 3300031730 Bacteria 5861
91 Ga0307516_10048467 3300031730 Bacteria 4180
92 Ga0307516_10141219 3300031730 Bacteria 2178
93 Ga0307405_10120085 3300031731 Bacteria 1797
94 Ga0307406_10000141 3300031901 Bacteria 43017
95 Ga0307412_10036495 3300031911 Bacteria 3150
96 Ga0307412_10218997 3300031911 Bacteria 1458
97 Ga0307510_10062511 3300033180 Bacteria 3804
98 Ga0307510_10183564 3300033180 Bacteria 1651
99 Ga0316584_0158479 3300036712 Bacteria 1682
100 Ga0436360_1235558 3300039438 Bacteria 4473
101 Ga0439465_0020185 3300041413 Bacteria 2086
102 Ga0439465_0045162 3300041413 Bacteria 1432
103 Ga0451833_1454973 3300041491 Bacteria 2939
104 Ga0451837_1617295 3300041494 Bacteria 2685
105 Ga0451843_0334061 3300041509 Bacteria 18899
106 Ga0451853_0676815 3300041512 Bacteria 2192
107 Ga0466957_0077024 3300044842 Unclassified 2072
108 Ga0451576_0084299 3300045051 Bacteria 3306
109 Ga0495627_000007 3300046453 Bacteria 575915
110 Ga0495592_0043205 3300046454 Bacteria 3373
111 Ga0495592_0175979 3300046454 Bacteria 1461
112 Ga0495629_0006240 3300046459 Bacteria 8846
113 Ga0495638_0000636 3300046460 Bacteria 38518
114 Ga0495638_0000794 3300046460 Bacteria 33330
115 Ga0495638_0003912 3300046460 Bacteria 11521
116 Ga0495651_0002672 3300046462 Bacteria 13844
117 Ga0495651_0138156 3300046462 Bacteria 1771
118 Ga0495653_0038737 3300046463 Bacteria 3740
119 Ga0495653_0050466 3300046463 Bacteria 3200
120 Ga0495650_0027598 3300046471 Bacteria 2620
121 Ga0495605_0000658 3300046474 Bacteria 26313
122 Ga0495605_0022746 3300046474 Unclassified 3305
123 Ga0495664_0042937 3300046477 Bacteria 2679
124 Ga0495596_0071239 3300046500 Bacteria 1350
125 Ga0495607_0000024 3300046501 Bacteria 159904
126 Ga0495607_0100296 3300046501 Bacteria 1552
127 Ga0495606_0097366 3300046507 Bacteria 1798
128 Ga0495606_0132075 3300046507 Bacteria 1483
129 Ga0495610_0025647 3300046512 Bacteria 3159
130 Ga0495616_0011852 3300046513 Bacteria 4969
131 Ga0495616_0161350 3300046513 Bacteria 1008
132 Ga0495618_0047475 3300046514 Bacteria 2710
133 Ga0495620_0048404 3300046515 Bacteria 1825
134 Ga0495620_0081466 3300046515 Unclassified 1309
135 Ga0495628_0000179 3300046516 Bacteria 55815
136 Ga0495628_0039824 3300046516 Bacteria 3757
137 Ga0495628_0052982 3300046516 Unclassified 3204
138 Ga0495630_0048283 3300046517 Bacteria 3185
139 Ga0495632_0128426 3300046519 Bacteria 1181
140 Ga0495637_0000279 3300046520 Bacteria 40327
141 Ga0495643_0224617 3300046522 Bacteria 889
142 Ga0495648_0004816 3300046524 Bacteria 11388
143 Ga0495648_0032959 3300046524 Bacteria 3391
144 Ga0495663_0003857 3300046525 Bacteria 4275
145 Ga0495652_0003775 3300046529 Bacteria 14784
146 Ga0495654_0010946 3300046530 Bacteria 4928
147 Ga0495654_0067100 3300046530 Bacteria 1709
148 Ga0495640_0063427 3300046533 Bacteria 2503
149 Ga0495587_0001588 3300046536 Bacteria 15129
150 Ga0495645_0073011 3300046543 Bacteria 2472
151 Ga0495667_0001846 3300046559 Bacteria 14066
152 Ga0495656_0044184 3300046615 Bacteria 1874
153 Ga0495625_0003310 3300046660 Bacteria 16253
154 Ga0495625_0013551 3300046660 Bacteria 6542
155 Ga0495625_0310853 3300046660 Bacteria 1006
156 Ga0495635_0209895 3300046663 Bacteria 1319
157 Ga0495661_0029524 3300046665 Bacteria 3498
158 Ga0495657_0019735 3300046675 Bacteria 4859
159 Ga0495657_0089230 3300046675 Bacteria 1981
160 Ga0495657_0214470 3300046675 Bacteria 1169
161 Ga0495599_0007297 3300046678 Bacteria 6695
162 Ga0495599_0015460 3300046678 Bacteria 4736
163 Ga0495623_0162472 3300046679 Bacteria 1311
164 Ga0495646_0026888 3300046680 Unclassified 3612
165 Ga0495646_0046613 3300046680 Bacteria 2642
166 Ga0495646_0077124 3300046680 Bacteria 1950
167 Ga0495624_0136580 3300046690 Unclassified 1503
168 Ga0495670_0000775 3300046691 Bacteria 15311
169 Ga0495649_0073787 3300046694 Bacteria 1828
170 Ga0495649_0154939 3300046694 Bacteria 1203
171 Ga0495589_0098573 3300046794 Bacteria 1415
172 Ga0495600_0006786 3300046809 Bacteria 6979
173 Ga0495660_0005079 3300046810 Bacteria 7907
174 Ga0495604_0015742 3300047317 Bacteria 6036
175 Ga0495604_0042482 3300047317 Bacteria 3562
176 Ga0495604_0186594 3300047317 Bacteria 1447
177 Ga0495604_0348653 3300047317 Unclassified 984
178 Ga0495674_0011690 3300047319 Bacteria 8282
179 Ga0495672_0008111 3300047320 Bacteria 7799
180 Ga0495672_0010818 3300047320 Bacteria 6475
181 Ga0495676_0178309 3300047321 Bacteria 1491
182 Ga0495680_0016715 3300047322 Bacteria 6293
183 Ga0495680_0016955 3300047322 Bacteria 6238
184 Ga0495683_0089680 3300047323 Bacteria 1491
185 Ga0495683_0128591 3300047323 Unclassified 1196
186 Ga0495675_0000012 3300047444 Bacteria 146748
187 Ga0495675_0048794 3300047444 Bacteria 2692
188 Ga0495685_082775 3300047447 Bacteria 1068
189 Ga0495673_0000530 3300047469 Bacteria 39656
190 Ga0495681_0076768 3300047470 Bacteria 1501
191 Ga0495684_0000152 3300047471 Bacteria 51013
192 Ga0495684_0026007 3300047471 Bacteria 4498
193 Ga0495686_0000223 3300047472 Bacteria 104265
194 Ga0495686_0008288 3300047472 Bacteria 7646
195 Ga0495686_0053753 3300047472 Bacteria 2523
196 Ga0495602_0003796 3300048088 Bacteria 15712
197 Ga0495602_0013227 3300048088 Bacteria 8442
198 Ga0495615_0001060 3300048090 Bacteria 3922
199 Ga0496102_0089936 3300048905 Bacteria 2841
200 Ga0496115_0468496 3300048918 Bacteria 1016
201 Ga0496116_0130201 3300048919 Unclassified 1436
202 Ga0496117_0000428 3300048920 Bacteria 70517
203 Ga0496118_0094710 3300048921 Bacteria 2041
204 Ga0496119_0000478 3300048922 Bacteria 54715
205 Ga0496119_0056870 3300048922 Bacteria 2367
206 Ga0496121_0025220 3300048924 Bacteria 5650
207 Ga0496121_0104023 3300048924 Bacteria 2183
208 Ga0496121_0108516 3300048924 Bacteria 2123
209 Ga0496121_0109726 3300048924 Bacteria 2107
210 Ga0496121_0134760 3300048924 Bacteria 1842
211 Ga0496121_0153889 3300048924 Bacteria 1689
212 Ga0496121_0441530 3300048924 Bacteria 841
213 Ga0496122_0000634 3300048925 Bacteria 71553
214 Ga0496122_0004291 3300048925 Bacteria 17864
215 Ga0496123_0000736 3300048926 Bacteria 53090
216 Ga0496123_0003420 3300048926 Bacteria 17864
217 Ga0496123_0014488 3300048926 Bacteria 6531
218 Ga0496125_0130068 3300048928 Bacteria 1774
219 Ga0496125_0137709 3300048928 Bacteria 1704
220 Ga0496126_0000139 3300048929 Bacteria 167097
221 Ga0496126_0000306 3300048929 Bacteria 104116
222 Ga0496126_0061086 3300048929 Bacteria 3387
223 Ga0496126_0135940 3300048929 Bacteria 2120
224 Ga0496126_0138875 3300048929 Bacteria 2093
225 Ga0496126_0254578 3300048929 Bacteria 1462
226 Ga0495678_000143 3300049459 Bacteria 86601
227 Ga0495682_0013144 3300049460 Bacteria 3156
228 Ga0501034_0000182 3300049571 Bacteria 117605
229 Ga0501034_0022443 3300049571 Bacteria 6432
230 Ga0501036_0335086 3300049572 Bacteria 1264
231 Ga0501068_0445447 3300049584 Unclassified 837
232 Ga0501070_0027515 3300049586 Bacteria 4770
233 Ga0501070_0405488 3300049586 Bacteria 1102
234 Ga0501035_0063038 3300049822 Bacteria 3298
235 Ga0501035_0418669 3300049822 Bacteria 1112
236 Ga0501044_0041750 3300049823 Bacteria 4775
237 nmdc:mga0sz30_73937_c1 3300050516 Bacteria 1469
238 Ga0495655_0031842 3300053083 Bacteria 1286
239 Ga0500578_0048797 3300053086 Bacteria 2716
240 Ga0500643_055474 3300053087 Bacteria 1122
241 Ga0500641_0005082 3300053096 Bacteria 4662
242 Ga0500650_0001074 3300053098 Bacteria 7853
243 Ga0500556_0000023 3300053104 Bacteria 168755
244 Ga0500562_006887 3300053108 Bacteria 2868
245 Ga0500608_025333 3300053122 Bacteria 2775
246 Ga0500642_0000005 3300053130 Bacteria 422725
247 Ga0500658_0000786 3300053134 Bacteria 13133
248 Ga0500568_0000246 3300053139 Bacteria 46161
249 Ga0500568_0000485 3300053139 Bacteria 29364
250 Ga0500568_0000561 3300053139 Bacteria 27307
251 Ga0500577_0000078 3300053142 Bacteria 22529
252 Ga0500577_0022144 3300053142 Bacteria 2105
253 Ga0500590_000606 3300053148 Bacteria 12747
254 Ga0500590_023347 3300053148 Bacteria 3212
255 Ga0500604_0000183 3300053151 Bacteria 17820
256 Ga0500604_0000324 3300053151 Bacteria 13292
257 Ga0500616_0000877 3300053153 Bacteria 33135
258 Ga0500616_0001349 3300053153 Bacteria 23983
259 Ga0500619_004069 3300053154 Bacteria 3091
260 Ga0500619_092294 3300053154 Bacteria 1023
261 Ga0500634_0000319 3300053161 Bacteria 15330
262 Ga0500636_0010984 3300053177 Bacteria 5295
263 Ga0500645_015458 3300053730 Bacteria 2417
264 2508726992 2508501050 Bacteria 9633614
265 2512351917 2512047030 Bacteria 9031815
266 2513636551 2513237093 Bacteria 7545552
267 2513711190 2513237103 Bacteria 7647401
268 2514014795 2513237161 Bacteria 8871253
269 2517041117 2516653077 Bacteria 7555578
270 2517099718 2517093000 Bacteria 7412387
271 2603862116 2602042107 Bacteria 6226103
272 2644168594 2643221629 Bacteria 5850260
273 2644350104 2643221662 Bacteria 5851492
274 2644728666 2643221733 Bacteria 5690728
275 2644736127 2643221734 Bacteria 5365412
276 2739284618 2738543019 Bacteria 7459457
277 2776264773 2775506901 Bacteria 9631051
278 2808973567 2808606384 Bacteria 8474373
279 2809008416 2808606390 Bacteria 8476311
280 2809015246 2808606391 Bacteria 8308166
281 2819612083 2818991448 Bacteria 6772224
282 2819721157 2818991467 Bacteria 5893227
283 2841911861 2841911363 Bacteria 6173697
284 2841916637 2841911363 Bacteria 6173697
285 2841921314 2841917233 Bacteria 6173500
286 2841922534 2841917233 Bacteria 6173500
287 2841952055 2841949485 Bacteria 8680857
288 2842221696 2842217011 Bacteria 7497767
289 2842325619 2842324504 Bacteria 9364110
290 2842349898 2842348783 Bacteria 9002918
291 2842454872 2842454564 Bacteria 8730687
292 2852393125 2852387548 Bacteria 8025568
293 2852394746 2852387548 Bacteria 8025568
294 2904439382 2904434214 Bacteria 6230908
295 2904485908 2904483920 Bacteria 7545285
296 2917703364 2917699015 Bacteria 7043791
297 2917705325 2917699015 Bacteria 7043791
298 2919077422 2919073203 Bacteria 6531949
299 2919532680 2919527303 Bacteria 7718827
300 2932800855 2932794094 Bacteria 7915132
301 2936371047 2936367885 Bacteria 7324495
302 2977835596 2977828996 Bacteria 7007971
303 3005409942 3005409236 Bacteria 7188837
304 3005413863 3005409236 Bacteria 7188837
305 639644889 639633055 Bacteria 7751309
306 8005380373 8005376324 Bacteria 6590079
307 8005562406 8005556819 Bacteria 6908598
308 8005567224 8005563573 Bacteria 7153261
309 8005648445 8005645114 Bacteria 6950293
310 8018165456 8018163183 Bacteria 7277977
311 8019626118 8019619141 Bacteria 9218857
312 8024489228 8024486573 Bacteria 6540512
313 8045866931 8045864390 Bacteria 5043873
314 8046769017 8046767195 Bacteria 7547379
315 8046771293 8046767195 Bacteria 7547379
316 8057533827 8057529695 Bacteria 6306553
317 8057576087 8057575449 Bacteria 7367519
318 8057877741 8057874678 Bacteria 7494653
319 Ga0495661_0134196
320 SwRhRL2b_contig_1629645
321 JGI25165J46597_1001378
322 rootH2_10025300
323 rootL2_10002654
324 rootL2_10055886
325 rootH1_10053178
326 JGI25160J50197_1000032
327 JGI25161J50226_1000017
328 Ga0006562J51391_1149412
329 Ga0006562J51391_1149413
330 Ga0055533_1000072
331 Ga0055532_1000013
332 Ga0055527_1000010
333 Ga0055535_1000010
334 Ga0055542_1000016
335 Ga0055542_1008273
336 Ga0055529_1000012
337 Ga0055526_1000062
338 Ga0055524_1000011
339 Ga0055543_1000039
340 Ga0065165_1000179
341 Ga0070661_100274471
342 Ga0070713_100289024
343 Ga0070663_100665222
344 Ga0070681_10073177
345 Ga0070679_100404418
346 Ga0068853_100066164
347 Ga0070665_100718546
348 Ga0075364_10375578
349 Ga0075369_10095110
350 Ga0068865_100045388
351 Ga0105240_10034275
352 Ga0105240_10105135
353 Ga0105240_10692168
354 Ga0114129_10030588
355 Ga0105237_10007146
356 Ga0105238_10002200
357 Ga0105238_10011630
358 Ga0105239_10022662
359 Ga0105239_10336407
360 Ga0157373_10000650
361 Ga0157370_10112760
362 Ga0157370_10330311
363 Ga0157369_10713346
364 Ga0171462_1010
365 Ga0171462_1023
366 Ga0171462_1054
367 Ga0163162_10051822
368 Ga0157379_10435192
369 Ga0183361_10007
370 Ga0209674_100011
371 Ga0209672_100002
372 Ga0209147_100003
373 Ga0207427_101714
374 Ga0209258_100042
375 Ga0209258_113712
376 Ga0209148_1000006
377 Ga0209148_1000602
378 Ga0209233_1000033
379 Ga0209455_1000003
380 Ga0209455_1000196
381 Ga0209673_1007005
382 Ga0209130_1000035
383 Ga0209130_1000092
384 Ga0209675_1000274
385 Ga0209564_1000143
386 Ga0209256_1000111
387 Ga0207426_1000017
388 Ga0207426_1000022
389 Ga0209051_1000350
390 Ga0209257_1029456
391 Ga0207695_10100702
392 Ga0207671_10028202
393 Ga0207649_10276107
394 Ga0207694_10003188
395 Ga0207694_10008743
396 Ga0207700_10172777
397 Ga0207664_10719615
398 Ga0207709_10000077
399 Ga0207704_10029762
400 Ga0207639_10024718
401 Ga0207639_10048401
402 Ga0207678_10058055
403 Ga0307515_10079328
404 Ga0307408_100001144
405 Ga0307408_100042958
406 Ga0307508_10016165
407 Ga0316576_10072638
408 Ga0307516_10026706
409 Ga0307516_10048467
410 Ga0307516_10141219
411 Ga0307405_10120085
412 Ga0307406_10000141
413 Ga0307412_10036495
414 Ga0307412_10218997
415 Ga0307510_10062511
416 Ga0307510_10183564
417 Ga0316584_0158479
418 Ga0436360_1235558
419 Ga0439465_0020185
420 Ga0439465_0045162
421 Ga0451833_1454973
422 Ga0451837_1617295
423 Ga0451843_0334061
424 Ga0451853_0676815
425 Ga0466957_0077024
426 Ga0451576_0084299
427 Ga0495627_000007
428 Ga0495592_0043205
429 Ga0495592_0175979
430 Ga0495629_0006240
431 Ga0495638_0000636
432 Ga0495638_0000794
433 Ga0495638_0003912
434 Ga0495651_0002672
435 Ga0495651_0138156
436 Ga0495653_0038737
437 Ga0495653_0050466
438 Ga0495650_0027598
439 Ga0495605_0000658
440 Ga0495605_0022746
441 Ga0495664_0042937
442 Ga0495596_0071239
443 Ga0495607_0000024
444 Ga0495607_0100296
445 Ga0495606_0097366
446 Ga0495606_0132075
447 Ga0495610_0025647
448 Ga0495616_0011852
449 Ga0495616_0161350
450 Ga0495618_0047475
451 Ga0495620_0048404
452 Ga0495620_0081466
453 Ga0495628_0000179
454 Ga0495628_0039824
455 Ga0495628_0052982
456 Ga0495630_0048283
457 Ga0495632_0128426
458 Ga0495637_0000279
459 Ga0495643_0224617
460 Ga0495648_0004816
461 Ga0495648_0032959
462 Ga0495663_0003857
463 Ga0495652_0003775
464 Ga0495654_0010946
465 Ga0495654_0067100
466 Ga0495640_0063427
467 Ga0495587_0001588
468 Ga0495645_0073011
469 Ga0495667_0001846
470 Ga0495656_0044184
471 Ga0495625_0003310
472 Ga0495625_0013551
473 Ga0495625_0310853
474 Ga0495635_0209895
475 Ga0495661_0029524
476 Ga0495657_0019735
477 Ga0495657_0089230
478 Ga0495657_0214470
479 Ga0495599_0007297
480 Ga0495599_0015460
481 Ga0495623_0162472
482 Ga0495646_0026888
483 Ga0495646_0046613
484 Ga0495646_0077124
485 Ga0495624_0136580
486 Ga0495670_0000775
487 Ga0495649_0073787
488 Ga0495649_0154939
489 Ga0495589_0098573
490 Ga0495600_0006786
491 Ga0495660_0005079
492 Ga0495604_0015742
493 Ga0495604_0042482
494 Ga0495604_0186594
495 Ga0495604_0348653
496 Ga0495674_0011690
497 Ga0495672_0008111
498 Ga0495672_0010818
499 Ga0495676_0178309
500 Ga0495680_0016715
501 Ga0495680_0016955
502 Ga0495683_0089680
503 Ga0495683_0128591
504 Ga0495675_0000012
505 Ga0495675_0048794
506 Ga0495685_082775
507 Ga0495673_0000530
508 Ga0495681_0076768
509 Ga0495684_0000152
510 Ga0495684_0026007
511 Ga0495686_0000223
512 Ga0495686_0008288
513 Ga0495686_0053753
514 Ga0495602_0003796
515 Ga0495602_0013227
516 Ga0495615_0001060
517 Ga0496102_0089936
518 Ga0496115_0468496
519 Ga0496116_0130201
520 Ga0496117_0000428
521 Ga0496118_0094710
522 Ga0496119_0000478
523 Ga0496119_0056870
524 Ga0496121_0025220
525 Ga0496121_0104023
526 Ga0496121_0108516
527 Ga0496121_0109726
528 Ga0496121_0134760
529 Ga0496121_0153889
530 Ga0496121_0441530
531 Ga0496122_0000634
532 Ga0496122_0004291
533 Ga0496123_0000736
534 Ga0496123_0003420
535 Ga0496123_0014488
536 Ga0496125_0130068
537 Ga0496125_0137709
538 Ga0496126_0000139
539 Ga0496126_0000306
540 Ga0496126_0061086
541 Ga0496126_0135940
542 Ga0496126_0138875
543 Ga0496126_0254578
544 Ga0495678_000143
545 Ga0495682_0013144
546 Ga0501034_0000182
547 Ga0501034_0022443
548 Ga0501036_0335086
549 Ga0501068_0445447
550 Ga0501070_0027515
551 Ga0501070_0405488
552 Ga0501035_0063038
553 Ga0501035_0418669
554 Ga0501044_0041750
555 nmdc:mga0sz30_73937_c1
556 Ga0495655_0031842
557 Ga0500578_0048797
558 Ga0500643_055474
559 Ga0500641_0005082
560 Ga0500650_0001074
561 Ga0500556_0000023
562 Ga0500562_006887
563 Ga0500608_025333
564 Ga0500642_0000005
565 Ga0500658_0000786
566 Ga0500568_0000246
567 Ga0500568_0000485
568 Ga0500568_0000561
569 Ga0500577_0000078
570 Ga0500577_0022144
571 Ga0500590_000606
572 Ga0500590_023347
573 Ga0500604_0000183
574 Ga0500604_0000324
575 Ga0500616_0000877
576 Ga0500616_0001349
577 Ga0500619_004069
578 Ga0500619_092294
579 Ga0500634_0000319
580 Ga0500636_0010984
581 Ga0500645_015458
582 2508726992
583 2512351917
584 2513636551
585 2513711190
586 2514014795
587 2517041117
588 2517099718
589 2603862116
590 2644168594
591 2644350104
592 2644728666
593 2644736127
594 2739284618
595 2776264773
596 2808973567
597 2809008416
598 2809015246
599 2819612083
600 2819721157
601 2841911861
602 2841916637
603 2841921314
604 2841922534
605 2841952055
606 2842221696
607 2842325619
608 2842349898
609 2842454872
610 2852393125
611 2852394746
612 2904439382
613 2904485908
614 2917703364
615 2917705325
616 2919077422
617 2919532680
618 2932800855
619 2936371047
620 2977835596
621 3005409942
622 3005413863
623 639644889
624 8005380373
625 8005562406
626 8005567224
627 8005648445
628 8018165456
629 8019626118
630 8024489228
631 8045866931
632 8046769017
633 8046771293
634 8057533827
635 8057576087
636 8057877741

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

68

262

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

74

318

0.92

PF08659

KR

KR domain

69

169

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhb-assembly1.cif.gz_B-2 crystal structure of nadph and 4-hydroxyphenylpyruvic acid bound aerf from microcystis aeruginosa 0.9434 1 254
5idy-assembly1.cif.gz_B crystal structure of an oxidoreductase from burkholderia vietnamiensis in complex with nadp 0.9399 1 252
2ewm-assembly1.cif.gz_A-2 crystal structure of the (s)-specific 1-phenylethanol dehydrogenase of the denitrifying bacterium strain ebn1 0.9381 5 255
5vps-assembly1.cif.gz_A crystal structure of an sdr from burkholderia ambifaria in complex with nadph with a tcep adduct 0.9354 1 258
8g93-assembly1.cif.gz_A crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9342 4 188
ID Description Score Start End Superfamily
5va8D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9333 1 258 3.40.50.720
5va8D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9298 1 258 3.40.50.720
5jy1D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9294 1 254 3.40.50.720
af_Q5M875_26_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9274 4 188 3.40.50.720
3ai1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9254 1 258 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6B1CEC0-F1-model_v4 deleted 0.9621 1 258
AF-A0A3C1N6A8-F1-model_v4 Short-chain dehydrogenase 0.9592 104 253
AF-A0A6B1CEC0-F1-model_v4 deleted 0.9585 1 258
AF-A0A2E1TSF4-F1-model_v4 3-oxoacyl-ACP reductase 0.9558 84 252
AF-A0A661UD25-F1-model_v4 3-oxoacyl-ACP reductase 0.9523 1 258

Map