F405455

General Info

Members Datasets Scaffolds Average Seq Length
320 201 640 755

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100001009|Ga0068861_1000010099
Length 884
Sequence MFRRLIPLLAAGALCATPASAHQYELGTLVIGHPWARPTAPGMPLGAAYLSITNNGKYADALVAASSPAAARVEFHQTTLADGMARMRPLTEIAIAPGATVKIEPGGIHVMLADLKAPLEPGKPVPLELEFRVAGKLTVELSIEARDAPPAAENAMKESLGVVTVTARRPSSLPTQIPTTIEGISGETVKRTVNATDSEDALKYFPSLNVRKRYIGDFDHAVLASRASGTQNSARSLVYADGILLSNLLGNGASFTPRWGLVTPEEIERVDVLYGPFSAAYSGNSVGAVVDYVTRMPASLELRASASTFVEDFDVYSTDQSYGGWQASASYGDAQGDSAWWVNFNRLDSRSHPIAYATRLVAAGVPGTGGTPVTGALAARNPRNQDWWLLGATNTIDTVQDHVKVKFAQEFGDDWRLAYTFGAWRNDAERTSDTWLHDGAGAPVYAGNVNIDGRVFAIGATDLGPANSELTHLMHGLSLRRRHLGGWDLEAAASLYDYQRDSTRSPIVAMPVAAGGGAGRIADQQGTGWSTLALRMSYGASSDAAHFVELGLSSDHYRLRSEVLATDDWLMGAAGARVAAFRGDTTLTSLYAQDSWRFAPDWQATLGARLEYWQAEDGALSNATQTLAFPSRSDTYISPKLALSWAVSGITTLKASVGRAFRVPTVAELYQGSIAANSIVNNDPDLAPERSWTAELSAVNDLDHGRLRATLFFEDTRDALYSQVNVAAGSTVTTVQNVDHIGTYGAELAGEWRALETLELSASLTWAHSRILENDAFPASVGARQPRVPDWRATALASWQPREHLTASLGARYSGLQYGQLDNGDVHGNSYTGTSDYLVFDARLRFAFGHLHAALGIDNLGNERYWAFHPYSRRTYNAEIAAEL

Samples

Sample ID Description Type Environment
1 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
81 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
120 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
121 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
124 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
142 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
143 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
153 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
159 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
160 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
161 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
164 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
165 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
167 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
168 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
169 2547132374 Acidovorax radicis N35 Isolate Unclassified
170 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
171 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
172 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
173 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
174 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
175 2643221556 Massilia sp. Root1485 Isolate Unclassified
176 2643221570 Acidovorax sp. Root568 Isolate Unclassified
177 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
178 2643221596 Acidovorax sp. Root70 Isolate Unclassified
179 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
180 2643221638 Duganella sp. Root336D2 Isolate Unclassified
181 2643221645 Massilia sp. Root351 Isolate Unclassified
182 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
183 2643221652 Acidovorax sp. Root402 Isolate Unclassified
184 2643221664 Massilia sp. Root418 Isolate Unclassified
185 2643221684 Massilia sp. Root133 Isolate Unclassified
186 2643221717 Acidovorax sp. Root267 Isolate Unclassified
187 2738541280 Massilia sp. GV090 Isolate Unclassified
188 2738541297 Duganella sp. GV083 Isolate Unclassified
189 2738541300 Massilia sp. GV016 Isolate Unclassified
190 2738541357 Duganella sp. GV053 Isolate Unclassified
191 2738543003 Duganella sp. GV066 Isolate Unclassified
192 2738543018 Massilia sp. GV045 Isolate Unclassified
193 2738543026 Duganella sp. GV089 Isolate Unclassified
194 2738543029 Duganella sp. GV039 Isolate Unclassified
195 2738543030 Massilia sp. GV097 Isolate Unclassified
196 2821131069 Duganella sp. 1224 Isolate Unclassified
197 2842711865 Duganella sp. R-73148 Isolate Unclassified
198 2857558681 Duganella sp. R-74565 Isolate Unclassified
199 2904424332 Duganella sp. 1411 Isolate Rhizosphere
200 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
201 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.38
Metatranscriptomes 0
Isolates 10.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.38
Nodule 0.62
Rhizoplane 1.25
Rhizosphere 64.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068861_100001009 3300005719 Bacteria 17193
2 JGI25158J39367_1000640 3300002739 Bacteria 6919
3 JGI25152J39213_1000003 3300002773 Bacteria 214804
4 JGI25150J39212_1000919 3300002774 Bacteria 9554
5 rootL2_10007027 3300003322 Bacteria 10464
6 rootL2_10120770 3300003322 Bacteria 6345
7 JGI25160J50197_1008610 3300003354 Bacteria 3874
8 JGI25161J50226_1000914 3300003374 Bacteria 10621
9 Ga0055526_1000023 3300003771 Bacteria 163444
10 Ga0055526_1000593 3300003771 Bacteria 28490
11 Ga0055524_1000050 3300003775 Bacteria 149338
12 Ga0055524_1000480 3300003775 Bacteria 31434
13 Ga0055530_10000319 3300003791 Bacteria 43619
14 Ga0055543_1000407 3300004625 Bacteria 27176
15 Ga0065165_1000344 3300005262 Bacteria 76165
16 Ga0065165_1000820 3300005262 Bacteria 41193
17 Ga0070676_10003544 3300005328 Bacteria 8165
18 Ga0070676_10012208 3300005328 Bacteria 4684
19 Ga0070690_100012802 3300005330 Bacteria 4941
20 Ga0070670_100001954 3300005331 Bacteria 16897
21 Ga0070670_100013728 3300005331 Bacteria 6941
22 Ga0068869_100012678 3300005334 Bacteria 5575
23 Ga0070666_10004612 3300005335 Bacteria 8406
24 Ga0070675_100020051 3300005354 Bacteria 5333
25 Ga0070675_100066262 3300005354 Bacteria 2987
26 Ga0070671_100012115 3300005355 Bacteria 6939
27 Ga0070662_100001282 3300005457 Bacteria 15459
28 Ga0070662_100025507 3300005457 Bacteria 4083
29 Ga0070679_100074971 3300005530 Bacteria 3373
30 Ga0070672_100014085 3300005543 Bacteria 5659
31 Ga0070672_100022615 3300005543 Bacteria 4622
32 Ga0070665_100001400 3300005548 Bacteria 28350
33 Ga0068864_100005443 3300005618 Bacteria 10442
34 Ga0068861_100004347 3300005719 Bacteria 9506
35 Ga0068861_100008108 3300005719 Bacteria 7226
36 Ga0068861_100034164 3300005719 Bacteria 3759
37 Ga0068860_100001365 3300005843 Bacteria 26507
38 Ga0068862_100034175 3300005844 Bacteria 4301
39 Ga0075370_10006769 3300006353 Bacteria 5792
40 Ga0075428_100020589 3300006844 Bacteria 7305
41 Ga0068865_100026110 3300006881 Bacteria 3848
42 Ga0099826_10000001 3300006948 Bacteria 1155201
43 Ga0105242_10042529 3300009176 Bacteria 3670
44 Ga0105242_10045308 3300009176 Bacteria 3564
45 Ga0105248_10039436 3300009177 Bacteria 5289
46 Ga0105249_10004392 3300009553 Bacteria 12195
47 Ga0157370_10008747 3300013104 Bacteria 10888
48 Ga0157374_10000156 3300013296 Bacteria 62978
49 Ga0157375_10023275 3300013308 Bacteria 5713
50 Ga0157375_10043032 3300013308 Bacteria 4377
51 Ga0157380_10000963 3300014326 Bacteria 18228
52 Ga0157380_10011422 3300014326 Bacteria 6416
53 Ga0182008_10006714 3300014497 Bacteria 6405
54 Ga0163161_10013833 3300017792 Bacteria 5620
55 Ga0213872_10000083 3300021361 Bacteria 87967
56 Ga0213872_10000094 3300021361 Bacteria 82769
57 Ga0213872_10000279 3300021361 Bacteria 43537
58 Ga0213872_10018190 3300021361 Bacteria 3241
59 Ga0209436_100533 3300025208 Bacteria 16546
60 Ga0209436_100714 3300025208 Bacteria 13922
61 Ga0207425_1000014 3300025245 Bacteria 481113
62 Ga0207425_1000313 3300025245 Bacteria 35023
63 Ga0209646_1000049 3300025246 Bacteria 301924
64 Ga0209148_1001068 3300025254 Bacteria 16753
65 Ga0209129_1000017 3300025258 Bacteria 480935
66 Ga0209129_1001978 3300025258 Bacteria 10671
67 Ga0209565_1000527 3300025263 Bacteria 27101
68 Ga0209565_1000585 3300025263 Bacteria 24617
69 Ga0209565_1001098 3300025263 Bacteria 13364
70 Ga0209565_1001109 3300025263 Bacteria 13204
71 Ga0209455_1000026 3300025272 Bacteria 653778
72 Ga0209130_1000581 3300025284 Bacteria 35580
73 Ga0209130_1000629 3300025284 Bacteria 33099
74 Ga0209130_1001558 3300025284 Bacteria 14527
75 Ga0209564_1000002 3300025295 Bacteria 1636803
76 Ga0209564_1000071 3300025295 Bacteria 301332
77 Ga0209564_1012849 3300025295 Bacteria 3610
78 Ga0209564_1014066 3300025295 Bacteria 3353
79 Ga0209758_1000038 3300025297 Bacteria 433771
80 Ga0209050_1000011 3300025298 Bacteria 914037
81 Ga0209050_1000418 3300025298 Bacteria 78617
82 Ga0209050_1000799 3300025298 Bacteria 44543
83 Ga0209050_1003109 3300025298 Bacteria 12723
84 Ga0209256_1000005 3300025299 Bacteria 1315082
85 Ga0209256_1000118 3300025299 Bacteria 168228
86 Ga0209256_1000446 3300025299 Bacteria 63058
87 Ga0209256_1001324 3300025299 Bacteria 26461
88 Ga0209256_1001862 3300025299 Bacteria 19490
89 Ga0207426_1001600 3300025302 Bacteria 18026
90 Ga0209257_1000003 3300025304 Bacteria 1702593
91 Ga0209257_1011434 3300025304 Bacteria 4274
92 Ga0207682_10007817 3300025893 Bacteria 4248
93 Ga0207682_10012003 3300025893 Bacteria 3381
94 Ga0207680_10011718 3300025903 Bacteria 4440
95 Ga0207680_10012928 3300025903 Bacteria 4267
96 Ga0207645_10016618 3300025907 Bacteria 4868
97 Ga0207662_10024779 3300025918 Bacteria 3453
98 Ga0207657_10041767 3300025919 Bacteria 4052
99 Ga0207681_10001939 3300025923 Bacteria 13264
100 Ga0207650_10001505 3300025925 Bacteria 16672
101 Ga0207650_10013238 3300025925 Bacteria 5707
102 Ga0207644_10018115 3300025931 Bacteria 4762
103 Ga0207644_10039127 3300025931 Bacteria 3346
104 Ga0207706_10000737 3300025933 Bacteria 34092
105 Ga0207706_10032602 3300025933 Bacteria 4639
106 Ga0207706_10033763 3300025933 Bacteria 4553
107 Ga0207686_10041441 3300025934 Bacteria 2808
108 Ga0207691_10016402 3300025940 Bacteria 7033
109 Ga0207691_10038939 3300025940 Bacteria 4399
110 Ga0207691_10040382 3300025940 Bacteria 4311
111 Ga0207691_10048614 3300025940 Bacteria 3888
112 Ga0207711_10010959 3300025941 Bacteria 7533
113 Ga0207689_10015518 3300025942 Bacteria 6452
114 Ga0207712_10013150 3300025961 Bacteria 5304
115 Ga0207658_10004433 3300025986 Bacteria 9765
116 Ga0207703_10002577 3300026035 Bacteria 15653
117 Ga0207641_10043715 3300026088 Bacteria 3764
118 Ga0207648_10005661 3300026089 Bacteria 12546
119 Ga0207675_100001371 3300026118 Bacteria 24423
120 Ga0207675_100002423 3300026118 Bacteria 18485
121 Ga0207675_100009560 3300026118 Bacteria 9067
122 Ga0207675_100011891 3300026118 Bacteria 8134
123 Ga0207683_10056763 3300026121 Bacteria 3436
124 Ga0209282_1000001 3300027666 Bacteria 2450367
125 Ga0268265_10008779 3300028380 Bacteria 6828
126 Ga0268264_10001001 3300028381 Bacteria 28672
127 Ga0307517_10004486 3300028786 Bacteria 21426
128 Ga0307515_10007106 3300028794 Bacteria 22238
129 Ga0307515_10028243 3300028794 Bacteria 9544
130 Ga0307512_10022012 3300030522 Bacteria 5740
131 Ga0316180_1004602 3300030736 Bacteria 3911
132 Ga0307513_10061816 3300031456 Bacteria 3962
133 Ga0307513_10129239 3300031456 Bacteria 2475
134 Ga0307509_10000405 3300031507 Bacteria 72472
135 Ga0307509_10001479 3300031507 Bacteria 39686
136 Ga0307509_10037679 3300031507 Bacteria 5283
137 Ga0307408_100000302 3300031548 Bacteria 47286
138 Ga0307408_100000443 3300031548 Bacteria 36595
139 Ga0307408_100002108 3300031548 Bacteria 14315
140 Ga0307508_10000690 3300031616 Bacteria 40442
141 Ga0307516_10000406 3300031730 Bacteria 56288
142 Ga0307516_10001028 3300031730 Bacteria 38713
143 Ga0307416_100014677 3300032002 Bacteria 5382
144 Ga0307411_10025960 3300032005 Bacteria 3518
145 Ga0307510_10001950 3300033180 Bacteria 23220
146 Ga0307510_10031984 3300033180 Bacteria 5934
147 Ga0395899_0039151 3300037312 Bacteria 3550
148 Ga0395900_0000263 3300037418 Bacteria 81724
149 Ga0395900_0102153 3300037418 Bacteria 2945
150 Ga0395898_0003423 3300037466 Bacteria 17769
151 Ga0395898_0079450 3300037466 Bacteria 3164
152 Ga0395905_0000432 3300037471 Bacteria 58505
153 Ga0395905_0002167 3300037471 Bacteria 22207
154 Ga0395905_0030184 3300037471 Bacteria 5109
155 Ga0395905_0090699 3300037471 Bacteria 2865
156 Ga0395901_0071785 3300038443 Bacteria 3608
157 Ga0436361_0145892 3300039447 Bacteria 5198
158 Ga0436361_0288336 3300039447 Bacteria 47657
159 Ga0436361_0840015 3300039447 Bacteria 9467
160 Ga0436361_1218614 3300039447 Bacteria 24357
161 Ga0451802_0474997 3300041460 Bacteria 4173
162 Ga0451577_0003947 3300042876 Bacteria 16007
163 Ga0466972_0011055 3300044658 Bacteria 4531
164 Ga0466966_0007018 3300044684 Bacteria 7459
165 Ga0466961_0008069 3300044693 Bacteria 6710
166 Ga0466961_0021146 3300044693 Bacteria 4188
167 Ga0453684_0067225 3300044712 Bacteria 4559
168 Ga0466968_0000513 3300044735 Bacteria 13172
169 Ga0495617_000013 3300046452 Bacteria 290031
170 Ga0495617_000376 3300046452 Bacteria 24740
171 Ga0495617_000519 3300046452 Bacteria 20095
172 Ga0495617_000632 3300046452 Bacteria 17654
173 Ga0495590_0000016 3300046457 Bacteria 225874
174 Ga0495629_0002907 3300046459 Bacteria 13063
175 Ga0495638_0000057 3300046460 Bacteria 193690
176 Ga0495638_0001795 3300046460 Bacteria 18682
177 Ga0495653_0000025 3300046463 Bacteria 160471
178 Ga0495653_0036371 3300046463 Bacteria 3878
179 Ga0495653_0053397 3300046463 Bacteria 3092
180 Ga0495650_0000208 3300046471 Bacteria 127362
181 Ga0495650_0001363 3300046471 Bacteria 24205
182 Ga0495650_0002923 3300046471 Bacteria 12976
183 Ga0495582_0024499 3300046473 Bacteria 3302
184 Ga0495584_0001038 3300046491 Bacteria 17341
185 Ga0495584_0001789 3300046491 Bacteria 12494
186 Ga0495585_0000084 3300046492 Bacteria 98839
187 Ga0495585_0001149 3300046492 Bacteria 21610
188 Ga0495585_0017941 3300046492 Bacteria 4083
189 Ga0495607_0014991 3300046501 Bacteria 5037
190 Ga0495583_0000157 3300046506 Bacteria 113758
191 Ga0495583_0000178 3300046506 Bacteria 108556
192 Ga0495583_0002441 3300046506 Bacteria 15886
193 Ga0495583_0004060 3300046506 Bacteria 10755
194 Ga0495606_0000058 3300046507 Bacteria 194187
195 Ga0495606_0000137 3300046507 Bacteria 124670
196 Ga0495606_0000573 3300046507 Bacteria 58366
197 Ga0495606_0008053 3300046507 Bacteria 9249
198 Ga0495610_0000012 3300046512 Bacteria 517442
199 Ga0495610_0002129 3300046512 Bacteria 16840
200 Ga0495610_0020791 3300046512 Bacteria 3632
201 Ga0495616_0000577 3300046513 Bacteria 27599
202 Ga0495616_0002675 3300046513 Bacteria 11688
203 Ga0495616_0009746 3300046513 Bacteria 5597
204 Ga0495632_0001689 3300046519 Bacteria 18062
205 Ga0495643_0000194 3300046522 Bacteria 96362
206 Ga0495643_0001009 3300046522 Bacteria 28773
207 Ga0495643_0002570 3300046522 Bacteria 14178
208 Ga0495644_0000142 3300046523 Bacteria 34605
209 Ga0495648_0000002 3300046524 Bacteria 593972
210 Ga0495648_0000118 3300046524 Bacteria 95878
211 Ga0495648_0001741 3300046524 Bacteria 21023
212 Ga0495648_0002539 3300046524 Bacteria 16737
213 Ga0495642_0001147 3300046528 Bacteria 12180
214 Ga0495642_0006298 3300046528 Bacteria 4552
215 Ga0495665_0012223 3300046531 Bacteria 4646
216 Ga0495609_0006665 3300046538 Bacteria 5861
217 Ga0495609_0025798 3300046538 Bacteria 2692
218 Ga0495597_0000080 3300046542 Bacteria 84504
219 Ga0495597_0000214 3300046542 Bacteria 52996
220 Ga0495597_0013764 3300046542 Bacteria 3868
221 Ga0495622_0000344 3300046557 Bacteria 33349
222 Ga0495633_0000073 3300046558 Bacteria 130286
223 Ga0495633_0002801 3300046558 Bacteria 12057
224 Ga0495633_0005521 3300046558 Bacteria 7697
225 Ga0495633_0013592 3300046558 Bacteria 4284
226 Ga0495668_0000132 3300046616 Bacteria 112674
227 Ga0495668_0000613 3300046616 Bacteria 43104
228 Ga0495611_0000826 3300046648 Bacteria 17086
229 Ga0495625_0000177 3300046660 Bacteria 98918
230 Ga0495625_0008270 3300046660 Bacteria 8896
231 Ga0495625_0016086 3300046660 Bacteria 5896
232 Ga0495625_0020862 3300046660 Bacteria 5051
233 Ga0495625_0026847 3300046660 Bacteria 4343
234 Ga0495659_0000047 3300046664 Bacteria 55056
235 Ga0495661_0000734 3300046665 Bacteria 32062
236 Ga0495588_0000078 3300046674 Bacteria 214254
237 Ga0495588_0016117 3300046674 Bacteria 3608
238 Ga0495670_0000181 3300046691 Bacteria 28175
239 Ga0495671_0000101 3300046692 Bacteria 78511
240 Ga0495671_0000514 3300046692 Bacteria 29672
241 Ga0495671_0000724 3300046692 Bacteria 23825
242 Ga0495649_0005502 3300046694 Bacteria 8035
243 Ga0495660_0001154 3300046810 Bacteria 18748
244 Ga0495660_0004597 3300046810 Bacteria 8325
245 Ga0495604_0070542 3300047317 Bacteria 2645
246 Ga0495636_0004844 3300047318 Bacteria 5271
247 Ga0495674_0027317 3300047319 Bacteria 5215
248 Ga0495672_0000170 3300047320 Bacteria 94669
249 Ga0495672_0000461 3300047320 Bacteria 48032
250 Ga0495683_0001601 3300047323 Bacteria 14569
251 Ga0495687_000007 3300047443 Bacteria 552679
252 Ga0495687_000102 3300047443 Bacteria 129228
253 Ga0495687_000209 3300047443 Bacteria 83956
254 Ga0495687_002602 3300047443 Bacteria 14189
255 Ga0495687_016582 3300047443 Bacteria 3702
256 Ga0495677_0000137 3300047445 Bacteria 34846
257 Ga0495673_0000015 3300047469 Bacteria 598766
258 Ga0495673_0000044 3300047469 Bacteria 283033
259 Ga0495686_0012721 3300047472 Bacteria 5875
260 Ga0495602_0024218 3300048088 Bacteria 5893
261 Ga0496102_0000200 3300048905 Bacteria 81231
262 Ga0496103_0028119 3300048906 Bacteria 3410
263 Ga0496103_0062093 3300048906 Bacteria 2325
264 Ga0496121_0039129 3300048924 Bacteria 4186
265 Ga0496122_0016070 3300048925 Bacteria 7113
266 Ga0496123_0000961 3300048926 Bacteria 44538
267 Ga0496123_0015431 3300048926 Bacteria 6265
268 Ga0495678_000602 3300049459 Bacteria 33862
269 Ga0495682_0000984 3300049460 Bacteria 17002
270 Ga0501033_0009357 3300049570 Bacteria 7541
271 Ga0500578_0000406 3300053086 Bacteria 52894
272 Ga0500644_0001272 3300053088 Bacteria 6884
273 Ga0500651_0009466 3300053093 Bacteria 5792
274 Ga0500594_0001001 3300053118 Bacteria 6056
275 Ga0500607_004344 3300053121 Bacteria 9809
276 Ga0500642_0000436 3300053130 Bacteria 13402
277 Ga0500652_018164 3300053131 Bacteria 2591
278 Ga0500559_0000265 3300053136 Bacteria 40939
279 Ga0500586_000205 3300053145 Bacteria 11512
280 Ga0500586_000206 3300053145 Bacteria 11510
281 Ga0500619_000187 3300053154 Bacteria 14576
282 Ga0500622_0001047 3300053156 Bacteria 23044
283 Ga0500622_0009470 3300053156 Bacteria 5389
284 Ga0500636_0017838 3300053177 Bacteria 4195
285 Ga0500636_0029279 3300053177 Bacteria 3252
286 Ga0500637_0002251 3300053178 Bacteria 8508
287 2525558422 2524614729 Bacteria 3091755
288 2548501376 2547132374 Bacteria 5530232
289 2587730591 2585428057 Bacteria 6737412
290 2587736819 2585428058 Bacteria 6853932
291 2588294934 2588253510 Bacteria 6901809
292 2630650404 2627854209 Bacteria 3093011
293 2643791161 2643221554 Bacteria 6603920
294 2643802646 2643221556 Bacteria 7251154
295 2643868403 2643221570 Bacteria 5103772
296 2643967793 2643221592 Bacteria 6608788
297 2643994514 2643221596 Bacteria 5006805
298 2644140615 2643221625 Bacteria 6512927
299 2644215370 2643221638 Bacteria 6579467
300 2644252102 2643221645 Bacteria 7207331
301 2644273582 2643221648 Bacteria 6521465
302 2644295339 2643221652 Bacteria 5140275
303 2644360738 2643221664 Bacteria 7272945
304 2644472151 2643221684 Bacteria 7145183
305 2644649079 2643221717 Bacteria 5676132
306 2738740205 2738541280 Bacteria 6630198
307 2738828186 2738541297 Bacteria 6549566
308 2738843548 2738541300 Bacteria 6675882
309 2739151982 2738541357 Bacteria 6549408
310 2739193997 2738543003 Bacteria 6549560
311 2739275378 2738543018 Bacteria 6718814
312 2739320378 2738543026 Bacteria 6549408
313 2739338714 2738543029 Bacteria 6549249
314 2739344422 2738543030 Bacteria 6719714
315 2821132545 2821131069 Bacteria 6108407
316 2842713641 2842711865 Bacteria 7155354
317 2857560223 2857558681 Bacteria 6617694
318 2904424860 2904424332 Bacteria 7633521
319 2990715430 2990710928 Bacteria 5002431
320 8047675269 8047673197 Bacteria 7395230
321 Ga0068861_100001009
322 JGI25158J39367_1000640
323 JGI25152J39213_1000003
324 JGI25150J39212_1000919
325 rootL2_10007027
326 rootL2_10120770
327 JGI25160J50197_1008610
328 JGI25161J50226_1000914
329 Ga0055526_1000023
330 Ga0055526_1000593
331 Ga0055524_1000050
332 Ga0055524_1000480
333 Ga0055530_10000319
334 Ga0055543_1000407
335 Ga0065165_1000344
336 Ga0065165_1000820
337 Ga0070676_10003544
338 Ga0070676_10012208
339 Ga0070690_100012802
340 Ga0070670_100001954
341 Ga0070670_100013728
342 Ga0068869_100012678
343 Ga0070666_10004612
344 Ga0070675_100020051
345 Ga0070675_100066262
346 Ga0070671_100012115
347 Ga0070662_100001282
348 Ga0070662_100025507
349 Ga0070679_100074971
350 Ga0070672_100014085
351 Ga0070672_100022615
352 Ga0070665_100001400
353 Ga0068864_100005443
354 Ga0068861_100004347
355 Ga0068861_100008108
356 Ga0068861_100034164
357 Ga0068860_100001365
358 Ga0068862_100034175
359 Ga0075370_10006769
360 Ga0075428_100020589
361 Ga0068865_100026110
362 Ga0099826_10000001
363 Ga0105242_10042529
364 Ga0105242_10045308
365 Ga0105248_10039436
366 Ga0105249_10004392
367 Ga0157370_10008747
368 Ga0157374_10000156
369 Ga0157375_10023275
370 Ga0157375_10043032
371 Ga0157380_10000963
372 Ga0157380_10011422
373 Ga0182008_10006714
374 Ga0163161_10013833
375 Ga0213872_10000083
376 Ga0213872_10000094
377 Ga0213872_10000279
378 Ga0213872_10018190
379 Ga0209436_100533
380 Ga0209436_100714
381 Ga0207425_1000014
382 Ga0207425_1000313
383 Ga0209646_1000049
384 Ga0209148_1001068
385 Ga0209129_1000017
386 Ga0209129_1001978
387 Ga0209565_1000527
388 Ga0209565_1000585
389 Ga0209565_1001098
390 Ga0209565_1001109
391 Ga0209455_1000026
392 Ga0209130_1000581
393 Ga0209130_1000629
394 Ga0209130_1001558
395 Ga0209564_1000002
396 Ga0209564_1000071
397 Ga0209564_1012849
398 Ga0209564_1014066
399 Ga0209758_1000038
400 Ga0209050_1000011
401 Ga0209050_1000418
402 Ga0209050_1000799
403 Ga0209050_1003109
404 Ga0209256_1000005
405 Ga0209256_1000118
406 Ga0209256_1000446
407 Ga0209256_1001324
408 Ga0209256_1001862
409 Ga0207426_1001600
410 Ga0209257_1000003
411 Ga0209257_1011434
412 Ga0207682_10007817
413 Ga0207682_10012003
414 Ga0207680_10011718
415 Ga0207680_10012928
416 Ga0207645_10016618
417 Ga0207662_10024779
418 Ga0207657_10041767
419 Ga0207681_10001939
420 Ga0207650_10001505
421 Ga0207650_10013238
422 Ga0207644_10018115
423 Ga0207644_10039127
424 Ga0207706_10000737
425 Ga0207706_10032602
426 Ga0207706_10033763
427 Ga0207686_10041441
428 Ga0207691_10016402
429 Ga0207691_10038939
430 Ga0207691_10040382
431 Ga0207691_10048614
432 Ga0207711_10010959
433 Ga0207689_10015518
434 Ga0207712_10013150
435 Ga0207658_10004433
436 Ga0207703_10002577
437 Ga0207641_10043715
438 Ga0207648_10005661
439 Ga0207675_100001371
440 Ga0207675_100002423
441 Ga0207675_100009560
442 Ga0207675_100011891
443 Ga0207683_10056763
444 Ga0209282_1000001
445 Ga0268265_10008779
446 Ga0268264_10001001
447 Ga0307517_10004486
448 Ga0307515_10007106
449 Ga0307515_10028243
450 Ga0307512_10022012
451 Ga0316180_1004602
452 Ga0307513_10061816
453 Ga0307513_10129239
454 Ga0307509_10000405
455 Ga0307509_10001479
456 Ga0307509_10037679
457 Ga0307408_100000302
458 Ga0307408_100000443
459 Ga0307408_100002108
460 Ga0307508_10000690
461 Ga0307516_10000406
462 Ga0307516_10001028
463 Ga0307416_100014677
464 Ga0307411_10025960
465 Ga0307510_10001950
466 Ga0307510_10031984
467 Ga0395899_0039151
468 Ga0395900_0000263
469 Ga0395900_0102153
470 Ga0395898_0003423
471 Ga0395898_0079450
472 Ga0395905_0000432
473 Ga0395905_0002167
474 Ga0395905_0030184
475 Ga0395905_0090699
476 Ga0395901_0071785
477 Ga0436361_0145892
478 Ga0436361_0288336
479 Ga0436361_0840015
480 Ga0436361_1218614
481 Ga0451802_0474997
482 Ga0451577_0003947
483 Ga0466972_0011055
484 Ga0466966_0007018
485 Ga0466961_0008069
486 Ga0466961_0021146
487 Ga0453684_0067225
488 Ga0466968_0000513
489 Ga0495617_000013
490 Ga0495617_000376
491 Ga0495617_000519
492 Ga0495617_000632
493 Ga0495590_0000016
494 Ga0495629_0002907
495 Ga0495638_0000057
496 Ga0495638_0001795
497 Ga0495653_0000025
498 Ga0495653_0036371
499 Ga0495653_0053397
500 Ga0495650_0000208
501 Ga0495650_0001363
502 Ga0495650_0002923
503 Ga0495582_0024499
504 Ga0495584_0001038
505 Ga0495584_0001789
506 Ga0495585_0000084
507 Ga0495585_0001149
508 Ga0495585_0017941
509 Ga0495607_0014991
510 Ga0495583_0000157
511 Ga0495583_0000178
512 Ga0495583_0002441
513 Ga0495583_0004060
514 Ga0495606_0000058
515 Ga0495606_0000137
516 Ga0495606_0000573
517 Ga0495606_0008053
518 Ga0495610_0000012
519 Ga0495610_0002129
520 Ga0495610_0020791
521 Ga0495616_0000577
522 Ga0495616_0002675
523 Ga0495616_0009746
524 Ga0495632_0001689
525 Ga0495643_0000194
526 Ga0495643_0001009
527 Ga0495643_0002570
528 Ga0495644_0000142
529 Ga0495648_0000002
530 Ga0495648_0000118
531 Ga0495648_0001741
532 Ga0495648_0002539
533 Ga0495642_0001147
534 Ga0495642_0006298
535 Ga0495665_0012223
536 Ga0495609_0006665
537 Ga0495609_0025798
538 Ga0495597_0000080
539 Ga0495597_0000214
540 Ga0495597_0013764
541 Ga0495622_0000344
542 Ga0495633_0000073
543 Ga0495633_0002801
544 Ga0495633_0005521
545 Ga0495633_0013592
546 Ga0495668_0000132
547 Ga0495668_0000613
548 Ga0495611_0000826
549 Ga0495625_0000177
550 Ga0495625_0008270
551 Ga0495625_0016086
552 Ga0495625_0020862
553 Ga0495625_0026847
554 Ga0495659_0000047
555 Ga0495661_0000734
556 Ga0495588_0000078
557 Ga0495588_0016117
558 Ga0495670_0000181
559 Ga0495671_0000101
560 Ga0495671_0000514
561 Ga0495671_0000724
562 Ga0495649_0005502
563 Ga0495660_0001154
564 Ga0495660_0004597
565 Ga0495604_0070542
566 Ga0495636_0004844
567 Ga0495674_0027317
568 Ga0495672_0000170
569 Ga0495672_0000461
570 Ga0495683_0001601
571 Ga0495687_000007
572 Ga0495687_000102
573 Ga0495687_000209
574 Ga0495687_002602
575 Ga0495687_016582
576 Ga0495677_0000137
577 Ga0495673_0000015
578 Ga0495673_0000044
579 Ga0495686_0012721
580 Ga0495602_0024218
581 Ga0496102_0000200
582 Ga0496103_0028119
583 Ga0496103_0062093
584 Ga0496121_0039129
585 Ga0496122_0016070
586 Ga0496123_0000961
587 Ga0496123_0015431
588 Ga0495678_000602
589 Ga0495682_0000984
590 Ga0501033_0009357
591 Ga0500578_0000406
592 Ga0500644_0001272
593 Ga0500651_0009466
594 Ga0500594_0001001
595 Ga0500607_004344
596 Ga0500642_0000436
597 Ga0500652_018164
598 Ga0500559_0000265
599 Ga0500586_000205
600 Ga0500586_000206
601 Ga0500619_000187
602 Ga0500622_0001047
603 Ga0500622_0009470
604 Ga0500636_0017838
605 Ga0500636_0029279
606 Ga0500637_0002251
607 2525558422
608 2548501376
609 2587730591
610 2587736819
611 2588294934
612 2630650404
613 2643791161
614 2643802646
615 2643868403
616 2643967793
617 2643994514
618 2644140615
619 2644215370
620 2644252102
621 2644273582
622 2644295339
623 2644360738
624 2644472151
625 2644649079
626 2738740205
627 2738828186
628 2738843548
629 2739151982
630 2739193997
631 2739275378
632 2739320378
633 2739338714
634 2739344422
635 2821132545
636 2842713641
637 2857560223
638 2904424860
639 2990715430
640 8047675269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04314

PCuAC

Copper chaperone PCu(A)C

31

139

0.98

PF07715

Plug

TonB-dependent Receptor Plug Domain

174

289

0.84

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

344

860

0.71

PF14905

OMP_b-brl_3

Outer membrane protein beta-barrel family

549

880

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2guf-assembly1.cif.gz_A in meso crystal structure of the cobalamin transporter, btub 0.8185 36 737
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.816 38 737
1nqg-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli, with bound calcium 0.8135 36 737
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8087 36 737
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.8077 38 737
ID Description Score Start End Superfamily
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.785 34 737 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7834 151 737 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.78 151 737 2.40.170.20
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7697 154 737 2.40.170.20
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.769 34 737 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A661BC67-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.8972 536 733 GO:0009279
GO:0015344
AF-A0A388PUK7-F1-model_v4 TonB-dependent receptor plug domain-containing protein 0.8624 17 305 GO:0009279
GO:0015344
AF-A0A7Y4N318-F1-model_v4 deleted 0.8485 491 735
AF-A0A6L7QEZ5-F1-model_v4 TonB-dependent receptor 0.8351 475 735 GO:0009279
GO:0015344
AF-A0A0P1MZM7-F1-model_v4 Iron complex outermembrane recepter protein 0.8337 38 737 GO:0009279
GO:0015344

Map