F405647

General Info

Members Datasets Scaffolds Average Seq Length
320 248 269 320

Family's Representative Sequence

Representative Sequence 3300042002|Ga0439442_003232|Ga0439442_003232_637_1590
Length 317
Sequence MEMSDSVDFLPGKLDRSAAFYVAGHRGLVGSAIWGHLQSEGFQNLVGRSSAELDLKNRDAVFAFFAQEKPLYVVLAAAKVGGILANSTFPVDFLSENLRIQVNVLDAAREHGVERLLFLGSSCIYPKFAEQPIREESLLTYAIAKIAGIMQIQAVRRQYGLPWISAMPTNLYGPGDNFSPTGSHVLPALIRRYDEALRSGATSVTNWGTGTPRREFLHVDDMAAACLHLLENYDGPLQVNVGTGSDVSIKELASVVADAVGYEGTIAWDESKPDGTPQKLLDVSRLAKAGWTASITLSEGVRRTVEWYRANAAHLRG

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2643221615 Nocardioides sp. Root224 Isolate Unclassified
3 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
4 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
5 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
6 2739367653 Kocuria sp. OV113 Isolate Unclassified
7 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
8 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
9 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
10 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
11 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
12 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
13 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
14 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
15 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
16 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
17 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
18 2855730933 Achromobacter sp. HZ28 Isolate Nodule
19 2855767633 Achromobacter sp. HZ34 Isolate Nodule
20 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
21 2857727296 Kocuria sp. R-72562 Isolate Unclassified
22 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
23 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
24 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
25 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
26 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
27 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
28 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
29 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
30 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
31 2920879853 Kocuria salina CV6 Isolate Unclassified
32 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
33 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
34 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
35 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
36 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
37 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
38 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
39 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
40 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
41 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
42 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
43 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
44 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
45 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
46 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
47 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
48 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
49 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
50 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
51 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
52 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
53 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
54 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
55 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
56 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
57 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
58 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
59 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
60 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
61 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
62 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
66 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
67 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
68 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
69 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
73 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
74 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
77 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
78 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
82 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
88 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
122 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
123 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
124 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
125 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
126 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
127 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
128 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
129 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
130 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
131 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
132 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
133 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
134 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
135 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
136 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
137 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
138 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
139 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
140 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
141 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
142 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
143 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
144 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
145 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
146 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
147 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
148 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
149 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
150 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
153 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
154 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
155 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
156 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
157 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
158 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
159 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
160 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
161 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
162 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
163 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
164 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
165 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
166 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
167 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
168 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
169 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
170 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
171 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
172 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
173 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
174 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
175 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
176 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
177 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
178 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
179 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
180 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
181 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
182 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
183 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
184 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
185 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
186 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
187 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
188 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
189 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
190 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
191 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
192 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
193 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
194 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
195 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
196 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
197 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
198 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
199 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
200 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
201 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
202 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
203 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
204 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
205 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
206 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
207 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
208 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
209 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
210 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
211 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
212 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
213 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
214 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
215 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
221 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
222 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
223 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
224 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
225 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
226 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
227 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
228 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
229 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
230 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
231 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
232 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
233 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
234 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
235 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
236 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
237 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
238 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
239 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
240 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
241 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
242 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
243 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
244 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
245 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
246 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
247 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
248 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.75
Metatranscriptomes 0.31
Isolates 15.94

Biome Distribution

Category Percentage (%)
Aerial Root 0.94
Bulb 0
Endosphere 6.88
Nodule 0.62
Rhizoplane 8.12
Rhizosphere 70.62
Stem 0
Stem Tuber 0
Unclassified 12.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10002244 3300002459 Bacteria 3912
2 rootL2_10037346 3300003322 Bacteria 11078
3 Ga0006562J51391_1016623 3300003578 Bacteria 5462
4 Ga0070658_10000370 3300005327 Bacteria 39203
5 Ga0070658_10081913 3300005327 Bacteria 2651
6 Ga0070683_100110947 3300005329 Bacteria 2587
7 Ga0070670_100067058 3300005331 Bacteria 3080
8 Ga0070682_100084743 3300005337 Bacteria 2060
9 Ga0070660_100006078 3300005339 Bacteria 8347
10 Ga0070713_100442237 3300005436 Bacteria 1220
11 Ga0070707_100240232 3300005468 Bacteria 1763
12 Ga0070679_100447214 3300005530 Bacteria 1237
13 Ga0070684_100034584 3300005535 Bacteria 4321
14 Ga0068853_100074287 3300005539 Bacteria 2966
15 Ga0068853_100379934 3300005539 Bacteria 1319
16 Ga0070665_100000996 3300005548 Bacteria 35909
17 Ga0070665_100007768 3300005548 Bacteria 10892
18 Ga0068855_100078255 3300005563 Bacteria 3836
19 Ga0070702_100082209 3300005615 Bacteria 1932
20 Ga0068859_100029109 3300005617 Bacteria 5543
21 Ga0068864_100053279 3300005618 Bacteria 3489
22 Ga0068864_100063078 3300005618 Bacteria 3212
23 Ga0068863_100001133 3300005841 Bacteria 26626
24 Ga0081455_10000136 3300005937 Bacteria 85921
25 Ga0070717_10219687 3300006028 Bacteria 1670
26 Ga0075368_10027015 3300006042 Bacteria 2211
27 Ga0075363_100000033 3300006048 Bacteria 26948
28 Ga0075363_100091435 3300006048 Bacteria 1675
29 Ga0075364_10004005 3300006051 Bacteria 8461
30 Ga0075364_10026016 3300006051 Bacteria 3730
31 Ga0075370_10001825 3300006353 Bacteria 9524
32 Ga0075370_10047063 3300006353 Bacteria 2442
33 Ga0075428_100053271 3300006844 Bacteria 4433
34 Ga0075431_100211430 3300006847 Bacteria 1981
35 Ga0075429_100001794 3300006880 Bacteria 17788
36 Ga0097620_100029110 3300006931 Bacteria 5543
37 Ga0105244_10017902 3300009036 Bacteria 3990
38 Ga0105247_10017445 3300009101 Bacteria 4310
39 Ga0114129_10453349 3300009147 Bacteria 1682
40 Ga0114129_10485019 3300009147 Bacteria 1617
41 Ga0105248_10045209 3300009177 Bacteria 4938
42 Ga0105248_10154472 3300009177 Bacteria 2589
43 Ga0105237_10011668 3300009545 Bacteria 9298
44 Ga0157370_10001330 3300013104 Bacteria 30668
45 Ga0157369_10115088 3300013105 Bacteria 2856
46 Ga0163162_10541614 3300013306 Bacteria 1293
47 Ga0157372_10155568 3300013307 Bacteria 2640
48 Ga0157375_10113211 3300013308 Bacteria 2814
49 Ga0163163_10001654 3300014325 Bacteria 18775
50 Ga0163163_10017451 3300014325 Bacteria 6694
51 Ga0163163_10662238 3300014325 Bacteria 1107
52 Ga0209759_1013396 3300025256 Bacteria 2221
53 Ga0209025_1000003 3300025294 Bacteria 1366495
54 Ga0207655_1006279 3300025728 Bacteria 7903
55 Ga0207710_10002581 3300025900 Bacteria 8363
56 Ga0207705_10000811 3300025909 Bacteria 25635
57 Ga0207705_10002710 3300025909 Bacteria 13557
58 Ga0207671_10011907 3300025914 Bacteria 7033
59 Ga0207657_10000774 3300025919 Bacteria 33927
60 Ga0207650_10039028 3300025925 Bacteria 3470
61 Ga0207687_10263689 3300025927 Bacteria 1374
62 Ga0207700_10386967 3300025928 Bacteria 1224
63 Ga0207665_10032234 3300025939 Bacteria 3470
64 Ga0207711_10179033 3300025941 Bacteria 1927
65 Ga0207711_10182708 3300025941 Bacteria 1908
66 Ga0207667_10033638 3300025949 Bacteria 5510
67 Ga0207658_10005517 3300025986 Bacteria 8669
68 Ga0207639_10081159 3300026041 Bacteria 2568
69 Ga0207641_10010091 3300026088 Bacteria 7766
70 Ga0207641_10012986 3300026088 Bacteria 6834
71 Ga0207676_10015836 3300026095 Bacteria 5452
72 Ga0268266_10001219 3300028379 Bacteria 31613
73 Ga0268266_10010373 3300028379 Bacteria 8145
74 Ga0268264_10423561 3300028381 Bacteria 1284
75 Ga0316576_10045656 3300031727 Bacteria 3169
76 Ga0307405_10028871 3300031731 Bacteria 3236
77 Ga0307405_10071313 3300031731 Bacteria 2235
78 Ga0307410_10000981 3300031852 Bacteria 12297
79 Ga0307410_10135759 3300031852 Bacteria 1813
80 Ga0307406_10021433 3300031901 Bacteria 3822
81 Ga0307407_10002895 3300031903 Bacteria 6864
82 Ga0307412_10125628 3300031911 Bacteria 1855
83 Ga0307409_100001771 3300031995 Bacteria 10911
84 Ga0307409_100013481 3300031995 Bacteria 5263
85 Ga0307414_10085914 3300032004 Bacteria 2320
86 Ga0307414_10304281 3300032004 Bacteria 1350
87 Ga0307411_10048673 3300032005 Bacteria 2749
88 Ga0307415_100108746 3300032126 Bacteria 2052
89 Ga0316574_0054526 3300035398 Bacteria 2497
90 Ga0316584_0034137 3300036712 Bacteria 3771
91 Ga0395900_0417609 3300037418 Bacteria 1303
92 Ga0395898_0002334 3300037466 Bacteria 22639
93 Ga0395898_0071748 3300037466 Bacteria 3346
94 Ga0395898_0426390 3300037466 Bacteria 1264
95 Ga0395901_0396639 3300038443 Bacteria 1418
96 Ga0439436_0036382 3300041404 Bacteria 1420
97 Ga0439438_000639 3300041405 Bacteria 15753
98 Ga0439439_0001587 3300041406 Bacteria 4583
99 Ga0439439_0002670 3300041406 Bacteria 3821
100 Ga0439447_030311 3300041407 Bacteria 1364
101 Ga0439466_0005806 3300041411 Bacteria 4704
102 Ga0439466_0006360 3300041411 Bacteria 4495
103 Ga0439466_0020469 3300041411 Bacteria 2357
104 Ga0439465_0004920 3300041413 Bacteria 4294
105 Ga0439465_0008269 3300041413 Bacteria 3285
106 Ga0451791_0015129 3300041451 Bacteria 1049
107 Ga0439431_0003192 3300041997 Bacteria 3605
108 Ga0439431_0008036 3300041997 Bacteria 2364
109 Ga0439433_0000033 3300041999 Bacteria 17255
110 Ga0439442_000143 3300042002 Bacteria 17875
111 Ga0439442_003232 3300042002 Bacteria 3223
112 Ga0439442_006638 3300042002 Bacteria 2323
113 Ga0439442_008378 3300042002 Bacteria 2087
114 Ga0439432_000512 3300042006 Bacteria 14433
115 Ga0439449_0015575 3300042007 Bacteria 2858
116 Ga0439449_0094099 3300042007 Bacteria 1106
117 Ga0439452_000877 3300042010 Bacteria 13895
118 Ga0439457_000165 3300042014 Bacteria 17014
119 Ga0439457_000644 3300042014 Bacteria 10316
120 Ga0439457_001161 3300042014 Bacteria 7915
121 Ga0439462_0000065 3300042015 Bacteria 15578
122 Ga0450920_000268 3300042122 Bacteria 7805
123 Ga0450906_022731 3300042145 Bacteria 1118
124 Ga0450907_001569 3300042146 Bacteria 4858
125 Ga0450907_006194 3300042146 Bacteria 2002
126 Ga0450908_009989 3300042184 Bacteria 1756
127 Ga0450909_002580 3300042185 Bacteria 2568
128 Ga0439434_0000086 3300042435 Bacteria 23136
129 Ga0439434_0009795 3300042435 Bacteria 2819
130 Ga0450918_002615 3300042531 Bacteria 3400
131 Ga0450918_014737 3300042531 Bacteria 1358
132 Ga0466969_0000473 3300044656 Bacteria 22052
133 Ga0466972_0000561 3300044658 Bacteria 18133
134 Ga0466965_0109018 3300044683 Bacteria 1422
135 Ga0466966_0000212 3300044684 Bacteria 38899
136 Ga0466966_0034592 3300044684 Bacteria 3266
137 Ga0466961_0128360 3300044693 Bacteria 1589
138 Ga0466963_0033944 3300044694 Bacteria 3318
139 Ga0466963_0111206 3300044694 Bacteria 1881
140 Ga0466970_0007227 3300044765 Bacteria 5561
141 Ga0466960_0000462 3300044901 Bacteria 13932
142 Ga0466959_0009299 3300045049 Bacteria 6983
143 Ga0466959_0011143 3300045049 Bacteria 6452
144 Ga0466958_0160513 3300045836 Bacteria 1420
145 Ga0466967_0039835 3300045976 Bacteria 4042
146 Ga0466967_0046670 3300045976 Bacteria 3773
147 Ga0466967_0052250 3300045976 Bacteria 3586
148 Ga0466967_0057767 3300045976 Bacteria 3426
149 Ga0495592_0009672 3300046454 Bacteria 7256
150 Ga0495638_0001659 3300046460 Bacteria 19683
151 Ga0495651_0003723 3300046462 Bacteria 11682
152 Ga0495653_0008084 3300046463 Bacteria 8615
153 Ga0495580_0012516 3300046472 Bacteria 6504
154 Ga0495582_0099802 3300046473 Bacteria 1625
155 Ga0495662_0000503 3300046476 Bacteria 17777
156 Ga0495664_0012127 3300046477 Bacteria 4876
157 Ga0495608_0004287 3300046511 Bacteria 10215
158 Ga0495628_0014846 3300046516 Bacteria 6514
159 Ga0495630_0006365 3300046517 Bacteria 8392
160 Ga0495666_0000962 3300046526 Bacteria 13590
161 Ga0495652_0037117 3300046529 Bacteria 4229
162 Ga0495665_0000867 3300046531 Bacteria 15822
163 Ga0495640_0003625 3300046533 Bacteria 12396
164 Ga0495586_0004706 3300046535 Bacteria 7296
165 Ga0495587_0009280 3300046536 Bacteria 6310
166 Ga0495667_0209284 3300046559 Bacteria 1246
167 Ga0495668_0227563 3300046616 Bacteria 1021
168 Ga0495634_0024679 3300046642 Bacteria 4214
169 Ga0495611_0057189 3300046648 Bacteria 1767
170 Ga0495625_0046990 3300046660 Bacteria 3113
171 Ga0495635_0009620 3300046663 Bacteria 6756
172 Ga0495657_0035652 3300046675 Bacteria 3445
173 Ga0495599_0017027 3300046678 Bacteria 4515
174 Ga0495623_0121565 3300046679 Bacteria 1571
175 Ga0495646_0009230 3300046680 Bacteria 6258
176 Ga0495658_0200816 3300046683 Bacteria 1243
177 Ga0495613_0009016 3300046689 Bacteria 7399
178 Ga0495670_0024123 3300046691 Bacteria 3005
179 Ga0495649_0060219 3300046694 Bacteria 2043
180 Ga0495600_0006597 3300046809 Bacteria 7069
181 Ga0495581_0002358 3300047315 Bacteria 10656
182 Ga0495604_0003826 3300047317 Bacteria 11988
183 Ga0495674_0049044 3300047319 Bacteria 3733
184 Ga0495687_004462 3300047443 Bacteria 9435
185 Ga0495687_009734 3300047443 Bacteria 5340
186 Ga0495675_0014896 3300047444 Bacteria 4918
187 Ga0495684_0029238 3300047471 Bacteria 4229
188 Ga0495593_0018692 3300047673 Bacteria 3892
189 Ga0495602_0015427 3300048088 Bacteria 7710
190 Ga0495626_0092224 3300048091 Bacteria 1331
191 Ga0496100_0114940 3300048903 Bacteria 1876
192 Ga0496102_0000111 3300048905 Bacteria 117001
193 Ga0496102_0005824 3300048905 Bacteria 10483
194 Ga0496102_0131257 3300048905 Bacteria 2345
195 Ga0496102_0254475 3300048905 Bacteria 1656
196 Ga0496103_0000030 3300048906 Bacteria 211729
197 Ga0496104_0007656 3300048907 Bacteria 9563
198 Ga0496104_0052234 3300048907 Bacteria 3860
199 Ga0496104_0068153 3300048907 Bacteria 3381
200 Ga0496105_0319659 3300048908 Bacteria 1244
201 Ga0496106_0218906 3300048909 Bacteria 1518
202 Ga0496108_0021854 3300048911 Bacteria 5259
203 Ga0496108_0176466 3300048911 Bacteria 1850
204 Ga0496108_0177773 3300048911 Bacteria 1843
205 Ga0496110_0028871 3300048913 Bacteria 4768
206 Ga0496110_0054363 3300048913 Bacteria 3522
207 Ga0496111_0006731 3300048914 Bacteria 7483
208 Ga0496112_0009579 3300048915 Bacteria 8736
209 Ga0496113_0000625 3300048916 Bacteria 17778
210 Ga0496113_0210751 3300048916 Bacteria 1547
211 Ga0496114_0007100 3300048917 Bacteria 8835
212 Ga0496114_0009460 3300048917 Bacteria 7736
213 Ga0496114_0091763 3300048917 Bacteria 2580
214 Ga0496114_0289117 3300048917 Bacteria 1446
215 Ga0496115_0149594 3300048918 Bacteria 1927
216 Ga0496118_0008546 3300048921 Bacteria 10557
217 Ga0496120_0026471 3300048923 Bacteria 3581
218 Ga0496122_0000105 3300048925 Bacteria 194509
219 Ga0496123_0000075 3300048926 Bacteria 194499
220 Ga0496123_0049325 3300048926 Bacteria 2824
221 Ga0496124_0008968 3300048927 Bacteria 10352
222 Ga0496124_0013740 3300048927 Bacteria 7881
223 Ga0496124_0233376 3300048927 Bacteria 1373
224 Ga0496125_0000015 3300048928 Bacteria 516648
225 Ga0496125_0005377 3300048928 Bacteria 14283
226 Ga0496126_0001852 3300048929 Bacteria 30819
227 Ga0496126_0011880 3300048929 Bacteria 8955
228 Ga0501034_0068762 3300049571 Bacteria 3552
229 Ga0501034_0186552 3300049571 Bacteria 2037
230 Ga0501037_0033078 3300049573 Bacteria 3820
231 Ga0501038_0003960 3300049574 Bacteria 13757
232 Ga0501038_0034617 3300049574 Bacteria 4440
233 Ga0501038_0055995 3300049574 Bacteria 3387
234 Ga0501043_0063737 3300049579 Bacteria 2894
235 Ga0501047_0000127 3300049581 Bacteria 93760
236 Ga0501067_0002021 3300049583 Bacteria 11188
237 Ga0501069_0024733 3300049585 Bacteria 3277
238 Ga0501070_0010345 3300049586 Bacteria 7885
239 Ga0501070_0019188 3300049586 Bacteria 5734
240 Ga0501071_0061946 3300049587 Bacteria 2710
241 Ga0501072_0008027 3300049588 Bacteria 8012
242 Ga0501073_0002465 3300049589 Bacteria 13825
243 Ga0501073_0003474 3300049589 Bacteria 11826
244 Ga0501074_0001114 3300049590 Bacteria 17529
245 Ga0501074_0029024 3300049590 Bacteria 4007
246 Ga0501077_0004739 3300049593 Bacteria 8267
247 Ga0501079_0193416 3300049741 Bacteria 1588
248 Ga0501080_0004385 3300049742 Bacteria 12534
249 Ga0501083_0000004 3300049744 Bacteria 207886
250 Ga0501083_0004573 3300049744 Bacteria 9773
251 Ga0501044_0065372 3300049823 Bacteria 3709
252 nmdc:mga03683_14797_c1 3300050489 Bacteria 2895
253 nmdc:mga03n38_24674_c1 3300050490 Bacteria 2460
254 nmdc:mga00v17_9435_c1 3300050491 Bacteria 5281
255 nmdc:mga0yw44_15076_c1 3300050492 Bacteria 4127
256 nmdc:mga06z11_4303_c1 3300050494 Bacteria 5596
257 nmdc:mga07m45_26595_c1 3300050496 Bacteria 3181
258 nmdc:mga07m45_5496_c1 3300050496 Bacteria 6312
259 nmdc:mga09592_1557_c1 3300050508 Bacteria 18449
260 Ga0495601_0001958 3300053077 Bacteria 11511
261 Ga0495612_0018320 3300053078 Bacteria 2805
262 Ga0500610_0000272 3300053079 Bacteria 15730
263 Ga0495619_0008236 3300053085 Bacteria 6596
264 Ga0500556_0005151 3300053104 Bacteria 3697
265 Ga0500562_001323 3300053108 Bacteria 6115
266 Ga0500573_0000080 3300053140 Bacteria 46390
267 Ga0500573_0015761 3300053140 Bacteria 4287
268 Ga0500573_0029231 3300053140 Bacteria 3177
269 Ga0500616_0095839 3300053153 Bacteria 1460

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044693 Ga0466961_0128360 Ga0466961_0128360_690_1556 279
2 3300044694 Ga0466963_0033944 Ga0466963_0033944_1050_1916 279
3 3300044765 Ga0466970_0007227 Ga0466970_0007227_4659_5525 279
4 3300045836 Ga0466958_0160513 Ga0466958_0160513_290_1156 279
5 3300009036 Ga0105244_10017902 Ga0105244_100179021 282
6 3300041406 Ga0439439_0002670 Ga0439439_0002670_2377_3249 288
7 3300042014 Ga0439457_000165 Ga0439457_000165_4425_5297 288
8 3300042145 Ga0450906_022731 Ga0450906_022731_123_995 288
9 3300049579 Ga0501043_0063737 Ga0501043_0063737_1088_1960 290
10 3300046616 Ga0495668_0227563 Ga0495668_0227563_16_897 291
11 3300046648 Ga0495611_0057189 Ga0495611_0057189_283_1164 291
12 3300046694 Ga0495649_0060219 Ga0495649_0060219_770_1651 291
13 3300047443 Ga0495687_009734 Ga0495687_009734_1594_2475 291
14 3300041411 Ga0439466_0005806 Ga0439466_0005806_3338_4219 293
15 3300037466 Ga0395898_0002334 Ga0395898_0002334_20751_21635 294
16 iso_pu_bacteria 2904770941 2904773966 294
17 3300005436 Ga0070713_100442237 Ga0070713_1004422372 299
18 3300006028 Ga0070717_10219687 Ga0070717_102196872 299
19 3300025928 Ga0207700_10386967 Ga0207700_103869672 299
20 3300044656 Ga0466969_0000473 Ga0466969_0000473_1123_2031 299
21 3300044684 Ga0466966_0000212 Ga0466966_0000212_1773_2681 299
22 3300044694 Ga0466963_0111206 Ga0466963_0111206_739_1644 299
23 3300045049 Ga0466959_0011143 Ga0466959_0011143_4422_5330 299
24 3300045976 Ga0466967_0052250 Ga0466967_0052250_330_1232 299
25 3300049571 Ga0501034_0068762 Ga0501034_0068762_987_1892 299
26 3300049589 Ga0501073_0002465 Ga0501073_0002465_4298_5197 299
27 3300049593 Ga0501077_0004739 Ga0501077_0004739_256_1161 299
28 3300053078 Ga0495612_0018320 Ga0495612_0018320_1569_2474 299
29 iso_pu_bacteria 2863404153 2863407664 299
30 3300047443 Ga0495687_004462 Ga0495687_004462_7921_8967 304
31 3300049574 Ga0501038_0055995 Ga0501038_0055995_179_1096 305
32 3300042014 Ga0439457_001161 Ga0439457_001161_2353_3282 307
33 3300046454 Ga0495592_0009672 Ga0495592_0009672_4490_5419 307
34 3300046462 Ga0495651_0003723 Ga0495651_0003723_4458_5387 307
35 3300046463 Ga0495653_0008084 Ga0495653_0008084_2978_3907 307
36 3300046472 Ga0495580_0012516 Ga0495580_0012516_1208_2137 307
37 3300046476 Ga0495662_0000503 Ga0495662_0000503_12161_13090 307
38 3300046477 Ga0495664_0012127 Ga0495664_0012127_2978_3907 307
39 3300046511 Ga0495608_0004287 Ga0495608_0004287_5790_6719 307
40 3300046516 Ga0495628_0014846 Ga0495628_0014846_4298_5227 307
41 3300046517 Ga0495630_0006365 Ga0495630_0006365_3102_4031 307
42 3300046526 Ga0495666_0000962 Ga0495666_0000962_10194_11123 307
43 3300046529 Ga0495652_0037117 Ga0495652_0037117_503_1432 307
44 3300046531 Ga0495665_0000867 Ga0495665_0000867_11067_11996 307
45 3300046533 Ga0495640_0003625 Ga0495640_0003625_7839_8768 307
46 3300046535 Ga0495586_0004706 Ga0495586_0004706_4357_5286 307
47 3300046536 Ga0495587_0009280 Ga0495587_0009280_3266_4195 307
48 3300046559 Ga0495667_0209284 Ga0495667_0209284_12_941 307
49 3300046642 Ga0495634_0024679 Ga0495634_0024679_306_1235 307
50 3300046663 Ga0495635_0009620 Ga0495635_0009620_2850_3779 307
51 3300046675 Ga0495657_0035652 Ga0495657_0035652_1708_2637 307
52 3300046678 Ga0495599_0017027 Ga0495599_0017027_809_1738 307
53 3300046679 Ga0495623_0121565 Ga0495623_0121565_140_1069 307
54 3300046680 Ga0495646_0009230 Ga0495646_0009230_2798_3727 307
55 3300046689 Ga0495613_0009016 Ga0495613_0009016_3267_4196 307
56 3300046809 Ga0495600_0006597 Ga0495600_0006597_5835_6764 307
57 3300047315 Ga0495581_0002358 Ga0495581_0002358_3205_4134 307
58 3300047317 Ga0495604_0003826 Ga0495604_0003826_6390_7319 307
59 3300047319 Ga0495674_0049044 Ga0495674_0049044_2450_3379 307
60 3300047444 Ga0495675_0014896 Ga0495675_0014896_1988_2917 307
61 3300047471 Ga0495684_0029238 Ga0495684_0029238_2798_3727 307
62 3300047673 Ga0495593_0018692 Ga0495593_0018692_1611_2540 307
63 3300048088 Ga0495602_0015427 Ga0495602_0015427_2116_3045 307
64 3300053077 Ga0495601_0001958 Ga0495601_0001958_10208_11137 307
65 3300053085 Ga0495619_0008236 Ga0495619_0008236_2977_3906 307
66 iso_pu_bacteria 2855730933 2855731116 310
67 iso_pu_bacteria 2855767633 2855770283 310
68 iso_pu_bacteria 2881412998 2881414504 310
69 3300044658 Ga0466972_0000561 Ga0466972_0000561_4452_5393 311
70 3300009545 Ga0105237_10011668 Ga0105237_100116682 313
71 3300025914 Ga0207671_10011907 Ga0207671_100119073 313
72 3300031727 Ga0316576_10045656 Ga0316576_100456563 313
73 3300046691 Ga0495670_0024123 Ga0495670_0024123_1890_2831 313
74 iso_pu_bacteria 2857481737 2857483666 313
75 3300005327 Ga0070658_10081913 Ga0070658_100819133 314
76 3300005339 Ga0070660_100006078 Ga0070660_1000060787 314
77 3300005530 Ga0070679_100447214 Ga0070679_1004472141 314
78 3300005563 Ga0068855_100078255 Ga0068855_1000782553 314
79 3300025294 Ga0209025_1000003 Ga0209025_1000003249 314
80 3300025909 Ga0207705_10002710 Ga0207705_100027103 314
81 3300025919 Ga0207657_10000774 Ga0207657_1000077425 314
82 3300025949 Ga0207667_10033638 Ga0207667_100336381 314
83 3300005327 Ga0070658_10000370 Ga0070658_1000037015 315
84 3300005468 Ga0070707_100240232 Ga0070707_1002402321 315
85 3300025909 Ga0207705_10000811 Ga0207705_1000081112 315
86 3300035398 Ga0316574_0054526 Ga0316574_0054526_392_1339 315
87 3300036712 Ga0316584_0034137 Ga0316584_0034137_2096_3043 315
88 3300042002 Ga0439442_000143 Ga0439442_000143_16532_17479 315
89 3300042002 Ga0439442_003232 Ga0439442_003232_637_1590 315
90 3300042146 Ga0450907_006194 Ga0450907_006194_549_1496 315
91 3300005615 Ga0070702_100082209 Ga0070702_1000822092 316
92 3300044684 Ga0466966_0034592 Ga0466966_0034592_1915_2871 316
93 3300045049 Ga0466959_0009299 Ga0466959_0009299_1136_2092 316
94 3300048917 Ga0496114_0091763 Ga0496114_0091763_391_1341 316
95 3300049581 Ga0501047_0000127 Ga0501047_0000127_69152_70102 316
96 iso_pu_bacteria 2738543034 2739364472 316
97 iso_pu_bacteria 2523231044 2523383839 317
98 iso_pu_bacteria 2643221615 2644090875 317
99 iso_pu_bacteria 2643221657 2644320678 317
100 iso_pu_bacteria 2818991462 2819690812 317
101 iso_pu_bacteria 2818991469 2819728469 317
102 iso_pu_bacteria 2904497146 2904498814 317
103 iso_pu_bacteria 2946003308 2946003822 317
104 3300005937 Ga0081455_10000136 Ga0081455_1000013653 318
105 3300006051 Ga0075364_10004005 Ga0075364_100040054 318
106 3300006844 Ga0075428_100053271 Ga0075428_1000532714 318
107 3300006847 Ga0075431_100211430 Ga0075431_1002114302 318
108 3300006880 Ga0075429_100001794 Ga0075429_10000179410 318
109 3300013306 Ga0163162_10541614 Ga0163162_105416141 318
110 3300037466 Ga0395898_0426390 Ga0395898_0426390_67_1026 318
111 3300050491 nmdc:mga00v17_9435_c1 nmdc:mga00v17_9435_c1_2394_3350 318
112 3300050508 nmdc:mga09592_1557_c1 nmdc:mga09592_1557_c1_62_1045 318
113 iso_pu_bacteria 2905926851 2905928221 318
114 iso_pu_bacteria 8004021418 8004023836 318
115 3300048905 Ga0496102_0005824 Ga0496102_0005824_5217_6176 319
116 iso_pu_bacteria 2904501621 2904504729 319
117 iso_pu_bacteria 2945920336 2945921950 319
118 iso_pu_bacteria 2956939328 2956941610 319
119 iso_pu_bacteria 2738543028 2739329866 320
120 iso_pu_bacteria 2784746763 2785344441 320
121 iso_pu_bacteria 2808606371 2808895442 320
122 iso_pu_bacteria 2811994871 2812320051 320
123 iso_pu_bacteria 2902799365 2902802906 320
124 iso_pu_bacteria 2902810491 2902813813 320
125 iso_pu_bacteria 2904497146 2904500696 320
126 iso_pu_bacteria 2919391150 2919393685 320
127 iso_pu_bacteria 2939598168 2939599128 320
128 iso_pu_bacteria 2946037020 2946037812 320
129 iso_pu_bacteria 2946059875 2946061613 320
130 iso_pu_bacteria 8054107350 8054110827 320
131 3300013105 Ga0157369_10115088 Ga0157369_101150883 321
132 3300013307 Ga0157372_10155568 Ga0157372_101555682 321
133 3300048907 Ga0496104_0068153 Ga0496104_0068153_170_1141 321
134 3300048911 Ga0496108_0176466 Ga0496108_0176466_487_1458 321
135 3300048911 Ga0496108_0177773 Ga0496108_0177773_369_1340 321
136 3300048913 Ga0496110_0054363 Ga0496110_0054363_149_1120 321
137 3300048916 Ga0496113_0210751 Ga0496113_0210751_525_1496 321
138 3300048917 Ga0496114_0007100 Ga0496114_0007100_7764_8735 321
139 3300048917 Ga0496114_0009460 Ga0496114_0009460_1073_2044 321
140 3300048918 Ga0496115_0149594 Ga0496115_0149594_343_1314 321
141 3300048928 Ga0496125_0000015 Ga0496125_0000015_265347_266312 321
142 iso_pu_bacteria 2929212328 2929214149 321
143 iso_pu_bacteria 2939582691 2939586732 321
144 iso_pu_bacteria 2939660829 2939663373 321
145 iso_pu_bacteria 2974315732 2974319218 321
146 iso_pu_bacteria 2984523437 2984527445 321
147 3300006042 Ga0075368_10027015 Ga0075368_100270152 322
148 3300006048 Ga0075363_100000033 Ga0075363_10000003323 322
149 3300006048 Ga0075363_100091435 Ga0075363_1000914352 322
150 3300006051 Ga0075364_10026016 Ga0075364_100260163 322
151 3300006353 Ga0075370_10001825 Ga0075370_100018253 322
152 3300006353 Ga0075370_10047063 Ga0075370_100470633 322
153 3300013104 Ga0157370_10001330 Ga0157370_1000133026 322
154 3300032004 Ga0307414_10085914 Ga0307414_100859142 322
155 3300042002 Ga0439442_008378 Ga0439442_008378_197_1171 322
156 3300042007 Ga0439449_0015575 Ga0439449_0015575_14_985 322
157 3300045976 Ga0466967_0039835 Ga0466967_0039835_335_1312 322
158 3300045976 Ga0466967_0046670 Ga0466967_0046670_1865_2842 322
159 3300046660 Ga0495625_0046990 Ga0495625_0046990_2026_2997 322
160 3300048903 Ga0496100_0114940 Ga0496100_0114940_55_1032 322
161 3300048905 Ga0496102_0254475 Ga0496102_0254475_65_1033 322
162 3300048909 Ga0496106_0218906 Ga0496106_0218906_411_1388 322
163 3300048917 Ga0496114_0289117 Ga0496114_0289117_150_1127 322
164 3300048927 Ga0496124_0008968 Ga0496124_0008968_7906_8877 322
165 3300048927 Ga0496124_0233376 Ga0496124_0233376_341_1312 322
166 3300049583 Ga0501067_0002021 Ga0501067_0002021_9689_10666 322
167 3300049585 Ga0501069_0024733 Ga0501069_0024733_178_1188 322
168 3300049586 Ga0501070_0010345 Ga0501070_0010345_4765_5742 322
169 3300049586 Ga0501070_0019188 Ga0501070_0019188_4559_5569 322
170 3300049587 Ga0501071_0061946 Ga0501071_0061946_1115_2092 322
171 3300049588 Ga0501072_0008027 Ga0501072_0008027_1910_2887 322
172 3300049589 Ga0501073_0003474 Ga0501073_0003474_7821_8798 322
173 3300049590 Ga0501074_0001114 Ga0501074_0001114_9379_10356 322
174 3300049590 Ga0501074_0029024 Ga0501074_0029024_2337_3347 322
175 3300049742 Ga0501080_0004385 Ga0501080_0004385_11505_12482 322
176 3300049744 Ga0501083_0000004 Ga0501083_0000004_67668_68639 322
177 3300049744 Ga0501083_0004573 Ga0501083_0004573_2025_3002 322
178 3300050489 nmdc:mga03683_14797_c1 nmdc:mga03683_14797_c1_385_1353 322
179 3300050496 nmdc:mga07m45_5496_c1 nmdc:mga07m45_5496_c1_1039_2007 322
180 3300053079 Ga0500610_0000272 Ga0500610_0000272_9231_10202 322
181 iso_pu_bacteria 2811994872 2812322133 322
182 iso_pu_bacteria 2839986021 2839986672 322
183 iso_pu_bacteria 2852635781 2852636648 322
184 iso_pu_bacteria 2946024296 2946025037 322
185 iso_pu_bacteria 2977228692 2977231718 322
186 iso_pu_bacteria 2977264416 2977267031 322
187 3300005337 Ga0070682_100084743 Ga0070682_1000847432 323
188 3300009177 Ga0105248_10045209 Ga0105248_100452092 323
189 3300025927 Ga0207687_10263689 Ga0207687_102636891 323
190 3300025941 Ga0207711_10182708 Ga0207711_101827082 323
191 3300037466 Ga0395898_0071748 Ga0395898_0071748_1838_2809 323
192 3300048905 Ga0496102_0131257 Ga0496102_0131257_309_1280 323
193 3300050496 nmdc:mga07m45_26595_c1 nmdc:mga07m45_26595_c1_1620_2597 323
194 iso_pu_bacteria 2773857763 2774400722 323
195 3300002459 JGI24751J29686_10002244 JGI24751J29686_100022444 324
196 3300003322 rootL2_10037346 rootL2_100373467 324
197 3300003578 Ga0006562J51391_1016623 Ga0006562J51391_10166232 324
198 3300005329 Ga0070683_100110947 Ga0070683_1001109473 324
199 3300005331 Ga0070670_100067058 Ga0070670_1000670582 324
200 3300005535 Ga0070684_100034584 Ga0070684_1000345842 324
201 3300005539 Ga0068853_100074287 Ga0068853_1000742872 324
202 3300005539 Ga0068853_100379934 Ga0068853_1003799341 324
203 3300005548 Ga0070665_100000996 Ga0070665_10000099635 324
204 3300005548 Ga0070665_100007768 Ga0070665_1000077687 324
205 3300005617 Ga0068859_100029109 Ga0068859_1000291093 324
206 3300005618 Ga0068864_100053279 Ga0068864_1000532792 324
207 3300005618 Ga0068864_100063078 Ga0068864_1000630784 324
208 3300005841 Ga0068863_100001133 Ga0068863_1000011337 324
209 3300006931 Ga0097620_100029110 Ga0097620_1000291103 324
210 3300009101 Ga0105247_10017445 Ga0105247_100174452 324
211 3300009147 Ga0114129_10453349 Ga0114129_104533492 324
212 3300009147 Ga0114129_10485019 Ga0114129_104850192 324
213 3300009177 Ga0105248_10154472 Ga0105248_101544723 324
214 3300013308 Ga0157375_10113211 Ga0157375_101132112 324
215 3300014325 Ga0163163_10001654 Ga0163163_1000165415 324
216 3300014325 Ga0163163_10017451 Ga0163163_100174512 324
217 3300014325 Ga0163163_10662238 Ga0163163_106622381 324
218 3300025256 Ga0209759_1013396 Ga0209759_10133962 324
219 3300025728 Ga0207655_1006279 Ga0207655_10062796 324
220 3300025900 Ga0207710_10002581 Ga0207710_100025812 324
221 3300025925 Ga0207650_10039028 Ga0207650_100390284 324
222 3300025939 Ga0207665_10032234 Ga0207665_100322343 324
223 3300025941 Ga0207711_10179033 Ga0207711_101790332 324
224 3300025986 Ga0207658_10005517 Ga0207658_100055172 324
225 3300026041 Ga0207639_10081159 Ga0207639_100811593 324
226 3300026088 Ga0207641_10010091 Ga0207641_100100913 324
227 3300026088 Ga0207641_10012986 Ga0207641_100129866 324
228 3300026095 Ga0207676_10015836 Ga0207676_100158365 324
229 3300028379 Ga0268266_10001219 Ga0268266_1000121927 324
230 3300028379 Ga0268266_10010373 Ga0268266_100103732 324
231 3300028381 Ga0268264_10423561 Ga0268264_104235611 324
232 3300031731 Ga0307405_10028871 Ga0307405_100288712 324
233 3300031731 Ga0307405_10071313 Ga0307405_100713133 324
234 3300031852 Ga0307410_10000981 Ga0307410_1000098110 324
235 3300031852 Ga0307410_10135759 Ga0307410_101357592 324
236 3300031901 Ga0307406_10021433 Ga0307406_100214331 324
237 3300031903 Ga0307407_10002895 Ga0307407_100028953 324
238 3300031911 Ga0307412_10125628 Ga0307412_101256282 324
239 3300031995 Ga0307409_100001771 Ga0307409_1000017713 324
240 3300031995 Ga0307409_100013481 Ga0307409_1000134814 324
241 3300032004 Ga0307414_10304281 Ga0307414_103042812 324
242 3300032005 Ga0307411_10048673 Ga0307411_100486732 324
243 3300032126 Ga0307415_100108746 Ga0307415_1001087462 324
244 3300037418 Ga0395900_0417609 Ga0395900_0417609_165_1139 324
245 3300038443 Ga0395901_0396639 Ga0395901_0396639_364_1338 324
246 3300041404 Ga0439436_0036382 Ga0439436_0036382_197_1171 324
247 3300041405 Ga0439438_000639 Ga0439438_000639_11581_12555 324
248 3300041406 Ga0439439_0001587 Ga0439439_0001587_139_1113 324
249 3300041407 Ga0439447_030311 Ga0439447_030311_375_1349 324
250 3300041411 Ga0439466_0006360 Ga0439466_0006360_245_1222 324
251 3300041411 Ga0439466_0020469 Ga0439466_0020469_131_1105 324
252 3300041413 Ga0439465_0004920 Ga0439465_0004920_2963_3940 324
253 3300041413 Ga0439465_0008269 Ga0439465_0008269_1371_2345 324
254 3300041451 Ga0451791_0015129 Ga0451791_0015129_32_1012 324
255 3300041997 Ga0439431_0003192 Ga0439431_0003192_964_1941 324
256 3300041997 Ga0439431_0008036 Ga0439431_0008036_304_1278 324
257 3300041999 Ga0439433_0000033 Ga0439433_0000033_6080_7054 324
258 3300042002 Ga0439442_006638 Ga0439442_006638_287_1261 324
259 3300042006 Ga0439432_000512 Ga0439432_000512_1751_2725 324
260 3300042007 Ga0439449_0094099 Ga0439449_0094099_10_984 324
261 3300042010 Ga0439452_000877 Ga0439452_000877_9831_10805 324
262 3300042014 Ga0439457_000644 Ga0439457_000644_7482_8456 324
263 3300042015 Ga0439462_0000065 Ga0439462_0000065_12497_13471 324
264 3300042122 Ga0450920_000268 Ga0450920_000268_25_999 324
265 3300042146 Ga0450907_001569 Ga0450907_001569_287_1261 324
266 3300042184 Ga0450908_009989 Ga0450908_009989_98_1072 324
267 3300042185 Ga0450909_002580 Ga0450909_002580_1214_2188 324
268 3300042435 Ga0439434_0000086 Ga0439434_0000086_10710_11684 324
269 3300042435 Ga0439434_0009795 Ga0439434_0009795_1548_2525 324
270 3300042531 Ga0450918_002615 Ga0450918_002615_797_1771 324
271 3300042531 Ga0450918_014737 Ga0450918_014737_28_1077 324
272 3300044683 Ga0466965_0109018 Ga0466965_0109018_332_1321 324
273 3300044901 Ga0466960_0000462 Ga0466960_0000462_6404_7381 324
274 3300045976 Ga0466967_0057767 Ga0466967_0057767_177_1169 324
275 3300046460 Ga0495638_0001659 Ga0495638_0001659_18291_19274 324
276 3300046473 Ga0495582_0099802 Ga0495582_0099802_310_1293 324
277 3300046683 Ga0495658_0200816 Ga0495658_0200816_156_1139 324
278 3300048091 Ga0495626_0092224 Ga0495626_0092224_193_1176 324
279 3300048905 Ga0496102_0000111 Ga0496102_0000111_108928_109914 324
280 3300048906 Ga0496103_0000030 Ga0496103_0000030_204206_205192 324
281 3300048907 Ga0496104_0007656 Ga0496104_0007656_3542_4543 324
282 3300048907 Ga0496104_0052234 Ga0496104_0052234_1296_2270 324
283 3300048908 Ga0496105_0319659 Ga0496105_0319659_179_1153 324
284 3300048911 Ga0496108_0021854 Ga0496108_0021854_904_1905 324
285 3300048913 Ga0496110_0028871 Ga0496110_0028871_3774_4748 324
286 3300048914 Ga0496111_0006731 Ga0496111_0006731_2542_3543 324
287 3300048915 Ga0496112_0009579 Ga0496112_0009579_2992_3993 324
288 3300048916 Ga0496113_0000625 Ga0496113_0000625_7647_8648 324
289 3300048921 Ga0496118_0008546 Ga0496118_0008546_241_1227 324
290 3300048923 Ga0496120_0026471 Ga0496120_0026471_862_1908 324
291 3300048925 Ga0496122_0000105 Ga0496122_0000105_120953_121939 324
292 3300048926 Ga0496123_0000075 Ga0496123_0000075_72578_73564 324
293 3300048926 Ga0496123_0049325 Ga0496123_0049325_495_1475 324
294 3300048927 Ga0496124_0013740 Ga0496124_0013740_2876_3862 324
295 3300048928 Ga0496125_0005377 Ga0496125_0005377_5369_6355 324
296 3300048929 Ga0496126_0001852 Ga0496126_0001852_11820_12806 324
297 3300048929 Ga0496126_0011880 Ga0496126_0011880_2908_3909 324
298 3300049571 Ga0501034_0186552 Ga0501034_0186552_783_1766 324
299 3300049573 Ga0501037_0033078 Ga0501037_0033078_347_1333 324
300 3300049574 Ga0501038_0003960 Ga0501038_0003960_6253_7227 324
301 3300049574 Ga0501038_0034617 Ga0501038_0034617_2217_3194 324
302 3300049741 Ga0501079_0193416 Ga0501079_0193416_217_1206 324
303 3300049823 Ga0501044_0065372 Ga0501044_0065372_603_1577 324
304 3300050490 nmdc:mga03n38_24674_c1 nmdc:mga03n38_24674_c1_1401_2396 324
305 3300050492 nmdc:mga0yw44_15076_c1 nmdc:mga0yw44_15076_c1_932_1912 324
306 3300050494 nmdc:mga06z11_4303_c1 nmdc:mga06z11_4303_c1_2964_3959 324
307 3300053104 Ga0500556_0005151 Ga0500556_0005151_282_1265 324
308 3300053108 Ga0500562_001323 Ga0500562_001323_2727_3710 324
309 3300053140 Ga0500573_0000080 Ga0500573_0000080_29964_30938 324
310 3300053140 Ga0500573_0015761 Ga0500573_0015761_445_1428 324
311 3300053140 Ga0500573_0029231 Ga0500573_0029231_435_1433 324
312 3300053153 Ga0500616_0095839 Ga0500616_0095839_50_1030 324
313 iso_pu_bacteria 2739367653 2739604404 324
314 iso_pu_bacteria 2808606368 2808884555 324
315 iso_pu_bacteria 2816332305 2817509972 324
316 iso_pu_bacteria 2857727296 2857728836 324
317 iso_pu_bacteria 2920879853 2920883531 324
318 iso_pu_bacteria 2974315732 2974319189 324
319 iso_pu_bacteria 2984523437 2984527416 324
320 iso_pu_bacteria 2984592036 2984592380 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

20

242

0.95

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

34

304

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bsv-assembly1.cif.gz_A gdp-fucose synthetase from escherichia coli complex with nadph 0.9728 15 321
1e6u-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase 0.9698 15 317
1e7r-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase y136e 0.9696 15 317
1bws-assembly1.cif.gz_A crystal structure of gdp-4-keto-6-deoxy-d-mannose epimerase/reductase from escherichia coli a key enzyme in the biosynthesis of gdp-l-fucose 0.9678 15 317
1e7q-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase s107a 0.9665 15 317
ID Description Score Start End Superfamily
1bwsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.937 15 302 3.40.50.720
1bwsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9328 15 302 3.40.50.720
1e6uA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9255 180 317 3.90.25.10
1e6uA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.8976 180 317 3.90.25.10
af_A0A0R0KMW5_231_418_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8732 128 319 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A731UXI0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9988 69 167 GO:0050577
AF-A0A2M7R8L0-F1-model_v4 GDP-fucose synthetase 0.9978 12 167 GO:0050577
AF-A0A4Q3FS72-F1-model_v4 GDP-L-fucose synthase 0.9967 12 269 GO:0016853
GO:0050577
AF-A0A2A4Q680-F1-model_v4 GDP-fucose synthetase 0.9964 12 150 GO:0050577
AF-A0A4Q3TSA3-F1-model_v4 deleted 0.996 12 172

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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