F405648

General Info

Members Datasets Scaffolds Average Seq Length
320 187 640 137

Family's Representative Sequence

Representative Sequence 3300042533|Ga0450901_030454|Ga0450901_030454_45_464
Length 139
Sequence MAARTKARKRALDVLFEAEQRQVDPTTLLAERVADPGTAQTALPQYAVDIVEGVLAHRDRIDELIETYSHGWTLERMPAVDRALLRIGGWEILFNDDVPDVVAIDEAVDLARSLSTDDSPSFVNGLLARIVEMKPTITA

Samples

Sample ID Description Type Environment
1 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
30 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
62 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
63 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
64 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
65 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
66 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
67 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
68 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
69 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
70 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
71 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
72 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
73 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
74 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
75 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
85 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
88 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
89 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
97 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
98 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
134 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
135 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
136 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
137 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
138 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
139 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
140 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
145 2643221549 Agromyces sp. Root1464 Isolate Unclassified
146 2643221572 Leifsonia sp. Root60 Isolate Unclassified
147 2643221575 Microbacterium sp. Root61 Isolate Unclassified
148 2643221619 Agromyces sp. Root81 Isolate Unclassified
149 2643221649 Leifsonia sp. Root4 Isolate Unclassified
150 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
151 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
152 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
153 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
154 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
155 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
156 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
157 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
158 2773857759 Microbacterium sp. 1294 Isolate Unclassified
159 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
160 2808606372 Agromyces sp. 23-23 Isolate Unclassified
161 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
162 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
163 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
164 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
165 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
166 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
167 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
168 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
169 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
170 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
171 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
172 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
173 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
174 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
175 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
176 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
177 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
178 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
179 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
180 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
181 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
182 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
183 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
184 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
185 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
186 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
187 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.38
Metatranscriptomes 1.56
Isolates 14.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 10.62
Nodule 0
Rhizoplane 5.94
Rhizosphere 66.25
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0450901_030454 3300042533 Bacteria 595
2 JGI24740J21852_10026773 3300001979 Bacteria 1927
3 Ga0006562J51391_1112895 3300003578 Bacteria 1471
4 Ga0065714_10020896 3300005288 Bacteria 1609
5 Ga0070658_10000237 3300005327 Bacteria 48878
6 Ga0070658_10067506 3300005327 Bacteria 2922
7 Ga0070682_101033720 3300005337 Bacteria 684
8 Ga0070675_100279551 3300005354 Bacteria 1466
9 Ga0070667_101265716 3300005367 Bacteria 691
10 Ga0070710_10409310 3300005437 Bacteria 911
11 Ga0070663_100118774 3300005455 Bacteria 1995
12 Ga0070663_100733901 3300005455 Bacteria 842
13 Ga0068853_101112734 3300005539 Bacteria 762
14 Ga0068855_100152778 3300005563 Bacteria 2624
15 Ga0068861_100062449 3300005719 Bacteria 2862
16 Ga0075364_10026688 3300006051 Bacteria 3686
17 Ga0075364_10026800 3300006051 Bacteria 3679
18 Ga0075364_10057541 3300006051 Bacteria 2547
19 Ga0075364_10139526 3300006051 Bacteria 1630
20 Ga0075364_10207350 3300006051 Bacteria 1329
21 Ga0075364_10367155 3300006051 Bacteria 981
22 Ga0075364_10443177 3300006051 Bacteria 887
23 Ga0075364_10827978 3300006051 Bacteria 631
24 Ga0075370_10076909 3300006353 Bacteria 1915
25 Ga0075370_10503244 3300006353 Bacteria 731
26 Ga0075370_11050866 3300006353 Bacteria 500
27 Ga0075430_100645018 3300006846 Bacteria 873
28 Ga0105244_10019435 3300009036 Bacteria 3791
29 Ga0105244_10058873 3300009036 Bacteria 1937
30 Ga0111539_11446343 3300009094 Bacteria 797
31 Ga0105243_10007693 3300009148 Bacteria 8282
32 Ga0105243_10060196 3300009148 Bacteria 3033
33 Ga0105243_10185209 3300009148 Bacteria 1814
34 Ga0105243_10710389 3300009148 Bacteria 981
35 Ga0105249_10177166 3300009553 Bacteria 2071
36 Ga0105246_10958241 3300011119 Bacteria 772
37 Ga0157371_10002721 3300013102 Bacteria 16651
38 Ga0157371_10532822 3300013102 Bacteria 869
39 Ga0157371_11161676 3300013102 Bacteria 594
40 Ga0157370_10012548 3300013104 Bacteria 8784
41 Ga0157370_10301179 3300013104 Bacteria 1480
42 Ga0157369_10025220 3300013105 Bacteria 6600
43 Ga0163162_12955996 3300013306 Bacteria 546
44 Ga0157375_10811980 3300013308 Bacteria 1083
45 Ga0163163_10511903 3300014325 Bacteria 1262
46 Ga0157380_10039593 3300014326 Bacteria 3667
47 Ga0182006_1306806 3300015261 Bacteria 521
48 Ga0224712_10097116 3300022467 Bacteria 1243
49 Ga0207655_1006468 3300025728 Bacteria 7759
50 Ga0207655_1150082 3300025728 Bacteria 738
51 Ga0207692_10236485 3300025898 Bacteria 1089
52 Ga0207688_10203576 3300025901 Bacteria 1187
53 Ga0207647_10422917 3300025904 Bacteria 749
54 Ga0207645_10506548 3300025907 Bacteria 818
55 Ga0207705_10000006 3300025909 Bacteria 657147
56 Ga0207659_10104232 3300025926 Bacteria 2145
57 Ga0207709_10008746 3300025935 Bacteria 5584
58 Ga0207709_10113781 3300025935 Bacteria 1814
59 Ga0207709_10586865 3300025935 Bacteria 881
60 Ga0207689_10019688 3300025942 Bacteria 5687
61 Ga0207667_10009075 3300025949 Bacteria 11758
62 Ga0207712_10446151 3300025961 Bacteria 1096
63 Ga0207658_10261493 3300025986 Bacteria 1475
64 Ga0207639_10800847 3300026041 Bacteria 878
65 Ga0207678_10195621 3300026067 Bacteria 1728
66 Ga0207678_10622022 3300026067 Bacteria 947
67 Ga0207676_10672329 3300026095 Bacteria 1001
68 Ga0207675_100102916 3300026118 Bacteria 2691
69 Ga0268265_10448024 3300028380 Bacteria 1205
70 Ga0307408_100634393 3300031548 Bacteria 953
71 Ga0307514_10005788 3300031649 Bacteria 10919
72 Ga0307405_10446151 3300031731 Bacteria 1025
73 Ga0307405_10667224 3300031731 Bacteria 857
74 Ga0307405_10667440 3300031731 Bacteria 857
75 Ga0307413_10505595 3300031824 Bacteria 971
76 Ga0307413_10795844 3300031824 Bacteria 794
77 Ga0307413_11381113 3300031824 Bacteria 619
78 Ga0307413_12204237 3300031824 Bacteria 500
79 Ga0307410_10721496 3300031852 Bacteria 842
80 Ga0307406_10000108 3300031901 Bacteria 48095
81 Ga0307406_10040620 3300031901 Bacteria 2893
82 Ga0307406_10072154 3300031901 Bacteria 2265
83 Ga0307406_10098155 3300031901 Bacteria 1988
84 Ga0307407_10045016 3300031903 Bacteria 2491
85 Ga0307407_11515790 3300031903 Bacteria 530
86 Ga0307409_100867382 3300031995 Bacteria 914
87 Ga0307409_101103110 3300031995 Bacteria 815
88 Ga0307409_101485806 3300031995 Bacteria 705
89 Ga0307416_100385623 3300032002 Bacteria 1433
90 Ga0307416_100898075 3300032002 Bacteria 986
91 Ga0307416_101065186 3300032002 Bacteria 913
92 Ga0307414_10079785 3300032004 Bacteria 2391
93 Ga0307414_10135400 3300032004 Bacteria 1920
94 Ga0307414_10238218 3300032004 Bacteria 1505
95 Ga0307414_10981587 3300032004 Bacteria 777
96 Ga0307415_100336775 3300032126 Bacteria 1265
97 Ga0307415_100896348 3300032126 Bacteria 817
98 Ga0395900_0024033 3300037418 Bacteria 6235
99 Ga0395901_0104376 3300038443 Bacteria 2975
100 Ga0439466_0022779 3300041411 Bacteria 2208
101 Ga0439465_0033959 3300041413 Bacteria 1632
102 Ga0439465_0139262 3300041413 Bacteria 861
103 Ga0451789_0090894 3300041443 Bacteria 1044
104 Ga0451789_0981278 3300041443 Bacteria 1380
105 Ga0451791_0018396 3300041451 Bacteria 638
106 Ga0451791_0337388 3300041451 Bacteria 665
107 Ga0451793_1191807 3300041452 Bacteria 1201
108 Ga0451793_1604454 3300041452 Bacteria 1198
109 Ga0451793_1703532 3300041452 Bacteria 1139
110 Ga0451797_0866377 3300041453 Bacteria 538
111 Ga0451797_1400304 3300041453 Bacteria 1319
112 Ga0451795_0338101 3300041456 Bacteria 784
113 Ga0451806_029992 3300041462 Bacteria 705
114 Ga0451806_514644 3300041462 Bacteria 1663
115 Ga0451806_519250 3300041462 Bacteria 1539
116 Ga0451807_0976019 3300041486 Bacteria 706
117 Ga0451807_1475531 3300041486 Bacteria 780
118 Ga0451835_1081012 3300041492 Bacteria 573
119 Ga0451837_0419532 3300041494 Bacteria 854
120 Ga0451841_0878630 3300041498 Bacteria 567
121 Ga0450906_065530 3300042145 Bacteria 648
122 Ga0450907_073485 3300042146 Bacteria 593
123 Ga0450918_033359 3300042531 Bacteria 913
124 Ga0466965_0005741 3300044683 Bacteria 5601
125 Ga0466965_0048843 3300044683 Bacteria 2097
126 Ga0466965_0357101 3300044683 Bacteria 801
127 Ga0466965_0458419 3300044683 Bacteria 711
128 Ga0466970_0000039 3300044765 Bacteria 47478
129 Ga0466957_0038136 3300044842 Bacteria 2895
130 Ga0466960_0003363 3300044901 Bacteria 6141
131 Ga0466967_0306186 3300045976 Bacteria 1530
132 Ga0466967_0695156 3300045976 Bacteria 1007
133 Ga0495627_080259 3300046453 Bacteria 946
134 Ga0495627_117352 3300046453 Bacteria 753
135 Ga0495638_0019724 3300046460 Bacteria 4458
136 Ga0495610_0200402 3300046512 Bacteria 818
137 Ga0495656_0027647 3300046615 Bacteria 2268
138 Ga0495625_0094174 3300046660 Bacteria 2067
139 Ga0495625_0100760 3300046660 Bacteria 1985
140 Ga0495613_0224382 3300046689 Bacteria 1318
141 Ga0495670_0275363 3300046691 Bacteria 900
142 Ga0495649_0323667 3300046694 Bacteria 782
143 Ga0495672_0017547 3300047320 Bacteria 4785
144 Ga0495672_0127156 3300047320 Bacteria 1346
145 Ga0495686_0297413 3300047472 Bacteria 892
146 Ga0496109_0854986 3300048912 Bacteria 848
147 Ga0496111_0576926 3300048914 Bacteria 824
148 Ga0496113_0124755 3300048916 Bacteria 2016
149 Ga0496115_0431235 3300048918 Bacteria 1067
150 Ga0496117_0000128 3300048920 Bacteria 166039
151 Ga0496117_0001642 3300048920 Bacteria 31427
152 Ga0496117_0347570 3300048920 Bacteria 767
153 Ga0496117_0577838 3300048920 Bacteria 530
154 Ga0496118_0004353 3300048921 Bacteria 16850
155 Ga0496119_0002636 3300048922 Bacteria 19439
156 Ga0496119_0198212 3300048922 Bacteria 1041
157 Ga0496120_0022945 3300048923 Bacteria 3915
158 Ga0496120_0032972 3300048923 Bacteria 3116
159 Ga0496120_0263183 3300048923 Bacteria 804
160 Ga0496122_0000240 3300048925 Bacteria 123001
161 Ga0496122_0004129 3300048925 Bacteria 18364
162 Ga0496122_0005349 3300048925 Bacteria 15341
163 Ga0496122_0090553 3300048925 Bacteria 2087
164 Ga0496122_0094455 3300048925 Bacteria 2024
165 Ga0496123_0000076 3300048926 Bacteria 194050
166 Ga0496123_0006901 3300048926 Bacteria 10864
167 Ga0496123_0081398 3300048926 Bacteria 1968
168 Ga0496124_0003349 3300048927 Bacteria 19720
169 Ga0496124_0110410 3300048927 Bacteria 2214
170 Ga0496124_0454231 3300048927 Bacteria 873
171 Ga0496125_0013256 3300048928 Bacteria 8113
172 Ga0496125_0062145 3300048928 Bacteria 2989
173 Ga0496126_0006703 3300048929 Bacteria 12792
174 Ga0496126_0055808 3300048929 Bacteria 3572
175 Ga0496126_0088488 3300048929 Bacteria 2727
176 Ga0496126_1392750 3300048929 Bacteria 506
177 Ga0501317_036166 3300049533 Bacteria 737
178 Ga0501317_058830 3300049533 Bacteria 626
179 Ga0501031_0029260 3300049568 Bacteria 3593
180 Ga0501031_0176792 3300049568 Bacteria 1395
181 Ga0501032_0002467 3300049569 Bacteria 14446
182 Ga0501032_0070353 3300049569 Bacteria 2333
183 Ga0501033_0002039 3300049570 Bacteria 17558
184 Ga0501033_0005446 3300049570 Bacteria 10085
185 Ga0501033_0038626 3300049570 Bacteria 3567
186 Ga0501033_0147007 3300049570 Bacteria 1701
187 Ga0501033_0240359 3300049570 Bacteria 1285
188 Ga0501033_0407202 3300049570 Bacteria 948
189 Ga0501033_0511134 3300049570 Bacteria 830
190 Ga0501034_0002512 3300049571 Bacteria 22010
191 Ga0501034_0011869 3300049571 Bacteria 9013
192 Ga0501034_0019043 3300049571 Bacteria 7032
193 Ga0501034_0104586 3300049571 Bacteria 2824
194 Ga0501034_0208784 3300049571 Bacteria 1909
195 Ga0501034_0343013 3300049571 Bacteria 1423
196 Ga0501036_0006708 3300049572 Bacteria 9356
197 Ga0501036_0009233 3300049572 Bacteria 8107
198 Ga0501036_0745602 3300049572 Bacteria 808
199 Ga0501037_0001179 3300049573 Bacteria 19299
200 Ga0501037_0012642 3300049573 Bacteria 6220
201 Ga0501038_0015936 3300049574 Bacteria 6830
202 Ga0501038_0020210 3300049574 Bacteria 5991
203 Ga0501038_0682169 3300049574 Bacteria 771
204 Ga0501039_0000678 3300049575 Bacteria 24589
205 Ga0501039_0250962 3300049575 Bacteria 1391
206 Ga0501041_0223822 3300049577 Bacteria 1181
207 Ga0501042_0007615 3300049578 Bacteria 7105
208 Ga0501042_0161375 3300049578 Bacteria 1617
209 Ga0501042_0184111 3300049578 Bacteria 1507
210 Ga0501043_0006926 3300049579 Bacteria 9040
211 Ga0501043_0014495 3300049579 Bacteria 6170
212 Ga0501043_0029091 3300049579 Bacteria 4339
213 Ga0501043_0104978 3300049579 Bacteria 2220
214 Ga0501043_0197623 3300049579 Bacteria 1562
215 Ga0501043_0320675 3300049579 Bacteria 1181
216 Ga0501043_0623408 3300049579 Bacteria 795
217 Ga0501046_0005735 3300049580 Bacteria 11080
218 Ga0501046_0064326 3300049580 Bacteria 2863
219 Ga0501046_0690726 3300049580 Bacteria 719
220 Ga0501047_0029279 3300049581 Bacteria 5311
221 Ga0501047_0134728 3300049581 Bacteria 2350
222 Ga0501047_0439789 3300049581 Bacteria 1134
223 Ga0501047_1265950 3300049581 Bacteria 551
224 Ga0501048_0014545 3300049582 Bacteria 5823
225 Ga0501048_0053519 3300049582 Bacteria 2870
226 Ga0501067_0355949 3300049583 Bacteria 816
227 Ga0501068_0051528 3300049584 Bacteria 2490
228 Ga0501069_0037634 3300049585 Bacteria 2670
229 Ga0501069_0253016 3300049585 Bacteria 1028
230 Ga0501070_0004606 3300049586 Bacteria 11824
231 Ga0501070_0008288 3300049586 Bacteria 8785
232 Ga0501070_0221266 3300049586 Bacteria 1552
233 Ga0501070_1309475 3300049586 Bacteria 553
234 Ga0501071_0000126 3300049587 Bacteria 30914
235 Ga0501073_0021937 3300049589 Bacteria 4600
236 Ga0501073_0072346 3300049589 Bacteria 2401
237 Ga0501079_0380074 3300049741 Bacteria 1107
238 Ga0501080_0236818 3300049742 Bacteria 1667
239 Ga0501083_0000003 3300049744 Bacteria 235949
240 Ga0501083_0044350 3300049744 Bacteria 3010
241 Ga0501083_0045962 3300049744 Bacteria 2953
242 Ga0501035_0022099 3300049822 Bacteria 5843
243 Ga0501035_0035370 3300049822 Bacteria 4533
244 Ga0501035_0095984 3300049822 Bacteria 2605
245 Ga0501035_0609145 3300049822 Bacteria 889
246 Ga0501044_0004064 3300049823 Bacteria 16403
247 Ga0501044_0036713 3300049823 Bacteria 5125
248 Ga0501044_0086639 3300049823 Bacteria 3163
249 Ga0501044_1115121 3300049823 Bacteria 658
250 Ga0501045_0049191 3300049824 Bacteria 3074
251 nmdc:mga00v17_103909_c1 3300050491 Bacteria 1796
252 nmdc:mga00v17_257479_c1 3300050491 Bacteria 1132
253 nmdc:mga00v17_274203_c1 3300050491 Bacteria 1095
254 nmdc:mga00v17_56106_c1 3300050491 Bacteria 2407
255 nmdc:mga00v17_760753_c1 3300050491 Bacteria 619
256 nmdc:mga00v17_979561_c1 3300050491 Bacteria 533
257 nmdc:mga0yw44_1003624_c1 3300050492 Bacteria 565
258 nmdc:mga0yw44_394310_c1 3300050492 Bacteria 935
259 nmdc:mga0yw44_765162_c1 3300050492 Bacteria 656
260 nmdc:mga07m45_780316_c1 3300050496 Bacteria 548
261 Ga0500556_0000001 3300053104 Bacteria 1135060
262 Ga0500652_068226 3300053131 Bacteria 1470
263 Ga0500559_0000194 3300053136 Bacteria 48792
264 Ga0500559_0000565 3300053136 Bacteria 25683
265 Ga0500559_0035365 3300053136 Bacteria 2157
266 Ga0500568_0000006 3300053139 Bacteria 522235
267 Ga0500573_0000017 3300053140 Bacteria 181426
268 Ga0500573_0036767 3300053140 Bacteria 2828
269 Ga0500573_0050669 3300053140 Bacteria 2388
270 Ga0500573_0404722 3300053140 Bacteria 645
271 Ga0500577_0005489 3300053142 Bacteria 3423
272 Ga0500604_0058988 3300053151 Bacteria 1201
273 Ga0500616_0000021 3300053153 Bacteria 484527
274 Ga0501084_0097460 3300054114 Bacteria 2469
275 Ga0587091_024359 3300059511 Bacteria 1085
276 2587862887 2585428094 Bacteria 3604039
277 2643767824 2643221549 Bacteria 4042819
278 2643875095 2643221572 Bacteria 3614809
279 2643885550 2643221575 Bacteria 4022601
280 2644111204 2643221619 Bacteria 4158469
281 2644280614 2643221649 Bacteria 3867359
282 2644382151 2643221669 Bacteria 3611286
283 2644456906 2643221681 Bacteria 3707866
284 2644680174 2643221724 Bacteria 3593515
285 2645719834 2643221961 Bacteria 3919167
286 2645726712 2643221962 Bacteria 3874254
287 2723641979 2721755702 Bacteria 4373124
288 2730229624 2728369380 Bacteria 3620317
289 2747951960 2747842429 Bacteria 3914386
290 2774384427 2773857759 Bacteria 2963774
291 2808885560 2808606368 Bacteria 3174172
292 2808901953 2808606372 Bacteria 4649509
293 2809227358 2808606447 Bacteria 3572005
294 2835188492 2835188231 Bacteria 3476928
295 2839987486 2839986021 Bacteria 3685650
296 2844855532 2844852863 Bacteria 3849151
297 2852633264 2852632344 Bacteria 3463163
298 2852647266 2852646457 Bacteria 3408613
299 2852665242 2852663356 Bacteria 4090475
300 2857721183 2857720070 Bacteria 3189373
301 2857723771 2857723135 Bacteria 4217853
302 2857735706 2857733635 Bacteria 3532004
303 2870623586 2870622029 Bacteria 3643329
304 2870630266 2870628048 Bacteria 3696012
305 2895661222 2895660088 Bacteria 3782833
306 2919446269 2919443155 Bacteria 4072969
307 2928092169 2928090899 Bacteria 3158267
308 2932431932 2932431166 Bacteria 4215299
309 2935411330 2935409751 Bacteria 4179611
310 2939658025 2939657138 Bacteria 3740283
311 2946080966 2946080515 Bacteria 4310960
312 2966922833 2966921586 Bacteria 3092803
313 2977253985 2977251589 Bacteria 2952848
314 2984581058 2984580707 Bacteria 3351387
315 8004214211 8004212874 Bacteria 2861420
316 8046352987 8046352972 Bacteria 3613806
317 8046356494 8046352972 Bacteria 3613806
318 8055036100 8055034563 Bacteria 3562128
319 8055038391 8055037949 Bacteria 3337834
320 8057348764 8057345674 Bacteria 4160394
321 Ga0450901_030454
322 JGI24740J21852_10026773
323 Ga0006562J51391_1112895
324 Ga0065714_10020896
325 Ga0070658_10000237
326 Ga0070658_10067506
327 Ga0070682_101033720
328 Ga0070675_100279551
329 Ga0070667_101265716
330 Ga0070710_10409310
331 Ga0070663_100118774
332 Ga0070663_100733901
333 Ga0068853_101112734
334 Ga0068855_100152778
335 Ga0068861_100062449
336 Ga0075364_10026688
337 Ga0075364_10026800
338 Ga0075364_10057541
339 Ga0075364_10139526
340 Ga0075364_10207350
341 Ga0075364_10367155
342 Ga0075364_10443177
343 Ga0075364_10827978
344 Ga0075370_10076909
345 Ga0075370_10503244
346 Ga0075370_11050866
347 Ga0075430_100645018
348 Ga0105244_10019435
349 Ga0105244_10058873
350 Ga0111539_11446343
351 Ga0105243_10007693
352 Ga0105243_10060196
353 Ga0105243_10185209
354 Ga0105243_10710389
355 Ga0105249_10177166
356 Ga0105246_10958241
357 Ga0157371_10002721
358 Ga0157371_10532822
359 Ga0157371_11161676
360 Ga0157370_10012548
361 Ga0157370_10301179
362 Ga0157369_10025220
363 Ga0163162_12955996
364 Ga0157375_10811980
365 Ga0163163_10511903
366 Ga0157380_10039593
367 Ga0182006_1306806
368 Ga0224712_10097116
369 Ga0207655_1006468
370 Ga0207655_1150082
371 Ga0207692_10236485
372 Ga0207688_10203576
373 Ga0207647_10422917
374 Ga0207645_10506548
375 Ga0207705_10000006
376 Ga0207659_10104232
377 Ga0207709_10008746
378 Ga0207709_10113781
379 Ga0207709_10586865
380 Ga0207689_10019688
381 Ga0207667_10009075
382 Ga0207712_10446151
383 Ga0207658_10261493
384 Ga0207639_10800847
385 Ga0207678_10195621
386 Ga0207678_10622022
387 Ga0207676_10672329
388 Ga0207675_100102916
389 Ga0268265_10448024
390 Ga0307408_100634393
391 Ga0307514_10005788
392 Ga0307405_10446151
393 Ga0307405_10667224
394 Ga0307405_10667440
395 Ga0307413_10505595
396 Ga0307413_10795844
397 Ga0307413_11381113
398 Ga0307413_12204237
399 Ga0307410_10721496
400 Ga0307406_10000108
401 Ga0307406_10040620
402 Ga0307406_10072154
403 Ga0307406_10098155
404 Ga0307407_10045016
405 Ga0307407_11515790
406 Ga0307409_100867382
407 Ga0307409_101103110
408 Ga0307409_101485806
409 Ga0307416_100385623
410 Ga0307416_100898075
411 Ga0307416_101065186
412 Ga0307414_10079785
413 Ga0307414_10135400
414 Ga0307414_10238218
415 Ga0307414_10981587
416 Ga0307415_100336775
417 Ga0307415_100896348
418 Ga0395900_0024033
419 Ga0395901_0104376
420 Ga0439466_0022779
421 Ga0439465_0033959
422 Ga0439465_0139262
423 Ga0451789_0090894
424 Ga0451789_0981278
425 Ga0451791_0018396
426 Ga0451791_0337388
427 Ga0451793_1191807
428 Ga0451793_1604454
429 Ga0451793_1703532
430 Ga0451797_0866377
431 Ga0451797_1400304
432 Ga0451795_0338101
433 Ga0451806_029992
434 Ga0451806_514644
435 Ga0451806_519250
436 Ga0451807_0976019
437 Ga0451807_1475531
438 Ga0451835_1081012
439 Ga0451837_0419532
440 Ga0451841_0878630
441 Ga0450906_065530
442 Ga0450907_073485
443 Ga0450918_033359
444 Ga0466965_0005741
445 Ga0466965_0048843
446 Ga0466965_0357101
447 Ga0466965_0458419
448 Ga0466970_0000039
449 Ga0466957_0038136
450 Ga0466960_0003363
451 Ga0466967_0306186
452 Ga0466967_0695156
453 Ga0495627_080259
454 Ga0495627_117352
455 Ga0495638_0019724
456 Ga0495610_0200402
457 Ga0495656_0027647
458 Ga0495625_0094174
459 Ga0495625_0100760
460 Ga0495613_0224382
461 Ga0495670_0275363
462 Ga0495649_0323667
463 Ga0495672_0017547
464 Ga0495672_0127156
465 Ga0495686_0297413
466 Ga0496109_0854986
467 Ga0496111_0576926
468 Ga0496113_0124755
469 Ga0496115_0431235
470 Ga0496117_0000128
471 Ga0496117_0001642
472 Ga0496117_0347570
473 Ga0496117_0577838
474 Ga0496118_0004353
475 Ga0496119_0002636
476 Ga0496119_0198212
477 Ga0496120_0022945
478 Ga0496120_0032972
479 Ga0496120_0263183
480 Ga0496122_0000240
481 Ga0496122_0004129
482 Ga0496122_0005349
483 Ga0496122_0090553
484 Ga0496122_0094455
485 Ga0496123_0000076
486 Ga0496123_0006901
487 Ga0496123_0081398
488 Ga0496124_0003349
489 Ga0496124_0110410
490 Ga0496124_0454231
491 Ga0496125_0013256
492 Ga0496125_0062145
493 Ga0496126_0006703
494 Ga0496126_0055808
495 Ga0496126_0088488
496 Ga0496126_1392750
497 Ga0501317_036166
498 Ga0501317_058830
499 Ga0501031_0029260
500 Ga0501031_0176792
501 Ga0501032_0002467
502 Ga0501032_0070353
503 Ga0501033_0002039
504 Ga0501033_0005446
505 Ga0501033_0038626
506 Ga0501033_0147007
507 Ga0501033_0240359
508 Ga0501033_0407202
509 Ga0501033_0511134
510 Ga0501034_0002512
511 Ga0501034_0011869
512 Ga0501034_0019043
513 Ga0501034_0104586
514 Ga0501034_0208784
515 Ga0501034_0343013
516 Ga0501036_0006708
517 Ga0501036_0009233
518 Ga0501036_0745602
519 Ga0501037_0001179
520 Ga0501037_0012642
521 Ga0501038_0015936
522 Ga0501038_0020210
523 Ga0501038_0682169
524 Ga0501039_0000678
525 Ga0501039_0250962
526 Ga0501041_0223822
527 Ga0501042_0007615
528 Ga0501042_0161375
529 Ga0501042_0184111
530 Ga0501043_0006926
531 Ga0501043_0014495
532 Ga0501043_0029091
533 Ga0501043_0104978
534 Ga0501043_0197623
535 Ga0501043_0320675
536 Ga0501043_0623408
537 Ga0501046_0005735
538 Ga0501046_0064326
539 Ga0501046_0690726
540 Ga0501047_0029279
541 Ga0501047_0134728
542 Ga0501047_0439789
543 Ga0501047_1265950
544 Ga0501048_0014545
545 Ga0501048_0053519
546 Ga0501067_0355949
547 Ga0501068_0051528
548 Ga0501069_0037634
549 Ga0501069_0253016
550 Ga0501070_0004606
551 Ga0501070_0008288
552 Ga0501070_0221266
553 Ga0501070_1309475
554 Ga0501071_0000126
555 Ga0501073_0021937
556 Ga0501073_0072346
557 Ga0501079_0380074
558 Ga0501080_0236818
559 Ga0501083_0000003
560 Ga0501083_0044350
561 Ga0501083_0045962
562 Ga0501035_0022099
563 Ga0501035_0035370
564 Ga0501035_0095984
565 Ga0501035_0609145
566 Ga0501044_0004064
567 Ga0501044_0036713
568 Ga0501044_0086639
569 Ga0501044_1115121
570 Ga0501045_0049191
571 nmdc:mga00v17_103909_c1
572 nmdc:mga00v17_257479_c1
573 nmdc:mga00v17_274203_c1
574 nmdc:mga00v17_56106_c1
575 nmdc:mga00v17_760753_c1
576 nmdc:mga00v17_979561_c1
577 nmdc:mga0yw44_1003624_c1
578 nmdc:mga0yw44_394310_c1
579 nmdc:mga0yw44_765162_c1
580 nmdc:mga07m45_780316_c1
581 Ga0500556_0000001
582 Ga0500652_068226
583 Ga0500559_0000194
584 Ga0500559_0000565
585 Ga0500559_0035365
586 Ga0500568_0000006
587 Ga0500573_0000017
588 Ga0500573_0036767
589 Ga0500573_0050669
590 Ga0500573_0404722
591 Ga0500577_0005489
592 Ga0500604_0058988
593 Ga0500616_0000021
594 Ga0501084_0097460
595 Ga0587091_024359
596 2587862887
597 2643767824
598 2643875095
599 2643885550
600 2644111204
601 2644280614
602 2644382151
603 2644456906
604 2644680174
605 2645719834
606 2645726712
607 2723641979
608 2730229624
609 2747951960
610 2774384427
611 2808885560
612 2808901953
613 2809227358
614 2835188492
615 2839987486
616 2844855532
617 2852633264
618 2852647266
619 2852665242
620 2857721183
621 2857723771
622 2857735706
623 2870623586
624 2870630266
625 2895661222
626 2919446269
627 2928092169
628 2932431932
629 2935411330
630 2939658025
631 2946080966
632 2966922833
633 2977253985
634 2984581058
635 8004214211
636 8046352987
637 8046356494
638 8055036100
639 8055038391
640 8057348764

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01029

NusB

NusB family

5

132

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1eyv-assembly1.cif.gz_A the crystal structure of nusb from mycobacterium tuberculosis 0.9165 4 132
1eyv-assembly1.cif.gz_A the crystal structure of nusb from mycobacterium tuberculosis 0.8966 4 132
1tzx-assembly2.cif.gz_B t. maritima nusb, p3221 0.8906 4 134
3imq-assembly1.cif.gz_A crystal structure of the nusb101-s10(delta loop) complex 0.8883 1 135
3d3c-assembly3.cif.gz_C structural and functional analysis of the e. coli nusb-s10 transcription antitermination complex. 0.8668 3 135
ID Description Score Start End Superfamily
af_P9WIV1_1_139_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9184 1 132 1.10.940.10
1eyvA00 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9165 4 132 1.10.940.10
af_Q8VYC4_72_208_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9112 45 134 1.10.940.10
1eyvA00 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.8966 4 132 1.10.940.10
af_P0A780_1_139_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.8875 3 135 1.10.940.10
ID Description Score Start End GO Terms
AF-A0A2S8ZDP8-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 1 1 136 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A2N1JNR8-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 1 1 136 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A5C8HPW5-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9986 1 136 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A2H1IT81-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9982 48 135 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A7D4Q2K3-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9978 1 136 GO:0003723
GO:0005829
GO:0006353
GO:0031564

Map