F405686

General Info

Members Datasets Scaffolds Average Seq Length
320 225 640 369

Family's Representative Sequence

Representative Sequence 3300046648|Ga0495611_0061503|Ga0495611_0061503_63_1289
Length 408
Sequence MGASPSRERNKQIRTNQALQSNQGRGAAADTGTMNDAPDSDLAAVPCMLMRGGTSRGPFFLESDLPADPALRDRVLLAAMGSPDRRQIDGLGGAHPLTSKVGIVRPGTEAGVDLDFLFAQLQPDRDTVDTSPNCGNMLAAVLPFALERGLLPVGDGTTTARVLTLNTGMRCDVTVQTPNGRLQYTGAARIDGVPGTAAPISIDFLDTAGSVCPGLLPSGRVLDHIAVPGADGFEVDATLIDNGMPMVLVRAADMDVTGYETVAELNADAALKAKLEALRLTAGPLMGLGDVASRSYPKMCLVAAPRDGGSIATRCFIPHVCHEAIGVLAAVTVATACVLDGSVTQGIASVPAGPSKTVSVEHPTGEFSVELGLDANDPQKVVRAALLRTARPIMRGEVLISEQIWNGE

Samples

Sample ID Description Type Environment
1 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
27 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
28 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
33 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
36 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
37 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
58 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
67 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
90 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
98 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
108 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
123 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
124 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
133 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
145 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
146 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
147 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
148 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
155 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
164 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
165 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
170 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
171 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
172 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
173 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
174 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
180 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
181 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
191 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
192 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
193 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
200 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
201 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
202 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
203 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
204 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
205 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
206 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
207 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
208 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
209 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
210 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
211 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
212 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
213 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
214 2842711865 Duganella sp. R-73148 Isolate Unclassified
215 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
216 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
217 2857553236 Duganella sp. R-74557 Isolate Unclassified
218 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
219 2904504865 Serratia marcescens 1822 Isolate Unclassified
220 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
221 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
222 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
223 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
224 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
225 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.5
Metatranscriptomes 0
Isolates 7.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.06
Nodule 1.88
Rhizoplane 3.44
Rhizosphere 73.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495611_0061503 3300046648 Bacteria 1707
2 JGI25156J39149_1001371 3300002705 Bacteria 10448
3 JGI25165J46597_1000486 3300003214 Bacteria 38588
4 Ga0055533_1000069 3300003756 Bacteria 153904
5 Ga0055532_1000011 3300003758 Bacteria 385294
6 Ga0055527_1000009 3300003760 Bacteria 385294
7 Ga0055535_1000008 3300003761 Bacteria 385294
8 Ga0055542_1000014 3300003762 Bacteria 385294
9 Ga0055529_1000010 3300003763 Bacteria 385294
10 Ga0055537_1000060 3300003773 Bacteria 79376
11 Ga0055534_1000009 3300003784 Bacteria 210256
12 Ga0055528_1000012 3300003790 Bacteria 182704
13 Ga0065165_1001101 3300005262 Bacteria 32096
14 Ga0068869_100067079 3300005334 Bacteria 2646
15 Ga0068869_100221038 3300005334 Bacteria 1501
16 Ga0070687_100131586 3300005343 Bacteria 1445
17 Ga0070700_100181530 3300005441 Bacteria 1465
18 Ga0070694_100274530 3300005444 Bacteria 1283
19 Ga0068860_100000101 3300005843 Bacteria 142856
20 Ga0075365_10086273 3300006038 Bacteria 2133
21 Ga0075369_10047020 3300006186 Bacteria 1860
22 Ga0105247_10038533 3300009101 Bacteria 2918
23 Ga0105242_10339695 3300009176 Bacteria 1383
24 Ga0105239_10213099 3300010375 Bacteria 2165
25 Ga0157369_10085121 3300013105 Bacteria 3378
26 Ga0157369_10112282 3300013105 Bacteria 2895
27 Ga0157375_10246616 3300013308 Bacteria 1946
28 Ga0182008_10024550 3300014497 Bacteria 3068
29 Ga0213872_10007605 3300021361 Bacteria 5314
30 Ga0213872_10052789 3300021361 Bacteria 1844
31 Ga0209674_100011 3300025226 Bacteria 997175
32 Ga0209672_100002 3300025228 Bacteria 1733325
33 Ga0209147_100003 3300025229 Bacteria 1733325
34 Ga0209563_100359 3300025230 Bacteria 16912
35 Ga0207427_100366 3300025231 Bacteria 28009
36 Ga0209258_100005 3300025242 Bacteria 1087938
37 Ga0209148_1000006 3300025254 Bacteria 1733325
38 Ga0209759_1000006 3300025256 Bacteria 492407
39 Ga0209233_1000018 3300025261 Bacteria 886857
40 Ga0209565_1000015 3300025263 Bacteria 494091
41 Ga0209455_1000003 3300025272 Bacteria 1471893
42 Ga0209673_1000017 3300025273 Bacteria 492994
43 Ga0209675_1000012 3300025291 Bacteria 494061
44 Ga0209564_1000016 3300025295 Bacteria 613131
45 Ga0209256_1000314 3300025299 Bacteria 84164
46 Ga0207647_10058044 3300025904 Bacteria 2371
47 Ga0207699_10123363 3300025906 Bacteria 1679
48 Ga0207643_10085049 3300025908 Bacteria 1837
49 Ga0207705_10222245 3300025909 Bacteria 1435
50 Ga0207671_10021491 3300025914 Bacteria 4895
51 Ga0207662_10138194 3300025918 Bacteria 1541
52 Ga0207664_10254473 3300025929 Bacteria 1534
53 Ga0207689_10015226 3300025942 Bacteria 6511
54 Ga0207708_10209699 3300026075 Bacteria 1557
55 Ga0207702_10021218 3300026078 Bacteria 5376
56 Ga0207683_10263894 3300026121 Bacteria 1573
57 Ga0209371_1014485 3300027312 Bacteria 2159
58 Ga0268264_10000030 3300028381 Bacteria 418542
59 Ga0307515_10000494 3300028794 Bacteria 94354
60 Ga0307515_10006378 3300028794 Bacteria 23616
61 Ga0307515_10069247 3300028794 Bacteria 4828
62 Ga0316181_1129545 3300030744 Bacteria 1892
63 Ga0265330_10010969 3300031235 Bacteria 4257
64 Ga0265330_10078938 3300031235 Bacteria 1419
65 Ga0265332_10028981 3300031238 Bacteria 2421
66 Ga0265325_10002402 3300031241 Bacteria 12664
67 Ga0265340_10026205 3300031247 Bacteria 2948
68 Ga0265340_10056986 3300031247 Bacteria 1878
69 Ga0265339_10001335 3300031249 Bacteria 18436
70 Ga0307513_10015655 3300031456 Bacteria 9181
71 Ga0307513_10186357 3300031456 Bacteria 1932
72 Ga0307509_10021794 3300031507 Bacteria 7237
73 Ga0307509_10118233 3300031507 Bacteria 2634
74 Ga0307509_10134844 3300031507 Bacteria 2416
75 Ga0265313_10047311 3300031595 Bacteria 2083
76 Ga0307508_10000096 3300031616 Bacteria 103730
77 Ga0307514_10059508 3300031649 Bacteria 2918
78 Ga0265342_10023680 3300031712 Bacteria 3882
79 Ga0307516_10039313 3300031730 Bacteria 4716
80 Ga0307412_10000082 3300031911 Bacteria 93313
81 Ga0307507_10013349 3300033179 Bacteria 9983
82 Ga0307507_10075739 3300033179 Bacteria 3007
83 Ga0373934_0028483 3300035086 Bacteria 2177
84 Ga0373923_0008265 3300035111 Bacteria 3703
85 Ga0373936_0082049 3300035113 Bacteria 1343
86 Ga0373953_0000542 3300035117 Bacteria 10471
87 Ga0373954_0000323 3300035118 Bacteria 17518
88 Ga0373956_0009107 3300035119 Bacteria 4026
89 Ga0373957_0053966 3300035120 Bacteria 1542
90 Ga0373955_0003057 3300035172 Bacteria 7328
91 Ga0373927_0026860 3300035695 Bacteria 3762
92 Ga0373933_0001324 3300035724 Bacteria 14581
93 Ga0373937_0007329 3300036401 Bacteria 9549
94 Ga0373925_0056541 3300037068 Bacteria 2939
95 Ga0436361_0080901 3300039447 Bacteria 3046
96 Ga0436361_0761768 3300039447 Bacteria 9080
97 Ga0451855_1673813 3300041511 Bacteria 1443
98 Ga0466966_0029942 3300044684 Bacteria 3538
99 Ga0466961_0009705 3300044693 Bacteria 6126
100 Ga0466963_0206981 3300044694 Bacteria 1372
101 Ga0466964_0001512 3300044706 Bacteria 7984
102 Ga0466971_0001325 3300044719 Bacteria 10346
103 Ga0466970_0010401 3300044765 Bacteria 4724
104 Ga0466957_0111331 3300044842 Bacteria 1736
105 Ga0466959_0006379 3300045049 Bacteria 8166
106 Ga0495617_036482 3300046452 Bacteria 1648
107 Ga0495627_000007 3300046453 Bacteria 575915
108 Ga0495592_0100630 3300046454 Bacteria 2060
109 Ga0495590_0000008 3300046457 Bacteria 330520
110 Ga0495590_0000129 3300046457 Bacteria 44482
111 Ga0495590_0046032 3300046457 Bacteria 1522
112 Ga0495591_000043 3300046458 Bacteria 148885
113 Ga0495629_0007954 3300046459 Bacteria 7801
114 Ga0495629_0018501 3300046459 Bacteria 4986
115 Ga0495638_0010290 3300046460 Bacteria 6504
116 Ga0495638_0065519 3300046460 Bacteria 2236
117 Ga0495651_0014174 3300046462 Bacteria 6161
118 Ga0495653_0002557 3300046463 Bacteria 14498
119 Ga0495653_0012104 3300046463 Bacteria 7039
120 Ga0495653_0051904 3300046463 Bacteria 3145
121 Ga0495650_0004658 3300046471 Bacteria 9269
122 Ga0495650_0013175 3300046471 Bacteria 4390
123 Ga0495582_0006013 3300046473 Bacteria 6767
124 Ga0495582_0078125 3300046473 Bacteria 1835
125 Ga0495605_0005848 3300046474 Bacteria 7114
126 Ga0495605_0044395 3300046474 Bacteria 2198
127 Ga0495639_0046250 3300046475 Bacteria 1970
128 Ga0495584_0000025 3300046491 Bacteria 116731
129 Ga0495585_0018187 3300046492 Bacteria 4054
130 Ga0495585_0057090 3300046492 Bacteria 2155
131 Ga0495594_0019236 3300046499 Bacteria 3627
132 Ga0495594_0103617 3300046499 Bacteria 1601
133 Ga0495596_0004602 3300046500 Bacteria 6687
134 Ga0495596_0008019 3300046500 Bacteria 4722
135 Ga0495596_0019695 3300046500 Bacteria 2768
136 Ga0495596_0028698 3300046500 Bacteria 2232
137 Ga0495607_0056610 3300046501 Bacteria 2250
138 Ga0495583_0000011 3300046506 Bacteria 350215
139 Ga0495583_0000512 3300046506 Bacteria 55428
140 Ga0495583_0004680 3300046506 Bacteria 9645
141 Ga0495583_0021509 3300046506 Bacteria 3316
142 Ga0495583_0035902 3300046506 Bacteria 2361
143 Ga0495606_0004752 3300046507 Bacteria 13378
144 Ga0495606_0076342 3300046507 Bacteria 2094
145 Ga0495606_0114502 3300046507 Bacteria 1622
146 Ga0495608_0012098 3300046511 Bacteria 5998
147 Ga0495608_0032622 3300046511 Bacteria 3520
148 Ga0495610_0000947 3300046512 Bacteria 26928
149 Ga0495610_0002865 3300046512 Bacteria 14003
150 Ga0495610_0012368 3300046512 Bacteria 5144
151 Ga0495610_0032601 3300046512 Bacteria 2704
152 Ga0495610_0074468 3300046512 Bacteria 1575
153 Ga0495616_0000107 3300046513 Bacteria 72253
154 Ga0495616_0000150 3300046513 Bacteria 60876
155 Ga0495616_0001459 3300046513 Bacteria 16445
156 Ga0495616_0020120 3300046513 Bacteria 3636
157 Ga0495616_0137246 3300046513 Bacteria 1116
158 Ga0495618_0014381 3300046514 Bacteria 4821
159 Ga0495628_0110865 3300046516 Bacteria 2110
160 Ga0495628_0124628 3300046516 Bacteria 1974
161 Ga0495630_0020232 3300046517 Bacteria 4905
162 Ga0495631_0000337 3300046518 Bacteria 32281
163 Ga0495631_0018991 3300046518 Bacteria 3229
164 Ga0495632_0000109 3300046519 Bacteria 85257
165 Ga0495632_0000115 3300046519 Bacteria 81715
166 Ga0495632_0028756 3300046519 Bacteria 2899
167 Ga0495637_0000009 3300046520 Bacteria 402028
168 Ga0495643_0000028 3300046522 Bacteria 262886
169 Ga0495643_0001116 3300046522 Bacteria 26592
170 Ga0495643_0003017 3300046522 Bacteria 12656
171 Ga0495643_0020548 3300046522 Bacteria 3805
172 Ga0495643_0027465 3300046522 Bacteria 3197
173 Ga0495644_0027030 3300046523 Bacteria 2175
174 Ga0495648_0017897 3300046524 Bacteria 5047
175 Ga0495666_0003121 3300046526 Bacteria 8328
176 Ga0495642_0000611 3300046528 Bacteria 17994
177 Ga0495652_0082676 3300046529 Bacteria 2645
178 Ga0495652_0101223 3300046529 Bacteria 2336
179 Ga0495654_0005383 3300046530 Bacteria 7445
180 Ga0495665_0015163 3300046531 Bacteria 4154
181 Ga0495640_0056229 3300046533 Bacteria 2688
182 Ga0495587_0005573 3300046536 Bacteria 8216
183 Ga0495587_0015245 3300046536 Bacteria 4802
184 Ga0495587_0041831 3300046536 Bacteria 2734
185 Ga0495609_0000647 3300046538 Bacteria 27112
186 Ga0495621_0011400 3300046539 Bacteria 2748
187 Ga0495597_0000762 3300046542 Bacteria 25455
188 Ga0495645_0114611 3300046543 Bacteria 1904
189 Ga0495622_0000092 3300046557 Bacteria 80637
190 Ga0495633_0000181 3300046558 Bacteria 82164
191 Ga0495633_0000925 3300046558 Bacteria 24854
192 Ga0495633_0004718 3300046558 Bacteria 8568
193 Ga0495668_0000018 3300046616 Bacteria 417480
194 Ga0495668_0004203 3300046616 Bacteria 10382
195 Ga0495668_0094643 3300046616 Bacteria 1635
196 Ga0495634_0011966 3300046642 Bacteria 6295
197 Ga0495634_0013304 3300046642 Bacteria 5947
198 Ga0495634_0018282 3300046642 Bacteria 4991
199 Ga0495625_0062259 3300046660 Bacteria 2638
200 Ga0495625_0147795 3300046660 Bacteria 1581
201 Ga0495635_0006348 3300046663 Bacteria 8242
202 Ga0495635_0009795 3300046663 Bacteria 6699
203 Ga0495661_0000292 3300046665 Bacteria 56829
204 Ga0495661_0019260 3300046665 Bacteria 4476
205 Ga0495661_0021365 3300046665 Bacteria 4221
206 Ga0495661_0102290 3300046665 Bacteria 1610
207 Ga0495661_0123968 3300046665 Bacteria 1423
208 Ga0495588_0077721 3300046674 Bacteria 1731
209 Ga0495657_0100215 3300046675 Bacteria 1846
210 Ga0495599_0004863 3300046678 Bacteria 7993
211 Ga0495599_0054892 3300046678 Bacteria 2496
212 Ga0495623_0005974 3300046679 Bacteria 7930
213 Ga0495623_0019869 3300046679 Bacteria 4343
214 Ga0495646_0008308 3300046680 Bacteria 6600
215 Ga0495646_0035121 3300046680 Bacteria 3110
216 Ga0495669_0000304 3300046684 Bacteria 27214
217 Ga0495670_0005476 3300046691 Bacteria 6230
218 Ga0495649_0000028 3300046694 Bacteria 163229
219 Ga0495649_0028354 3300046694 Bacteria 3103
220 Ga0495649_0073883 3300046694 Bacteria 1826
221 Ga0495589_0002249 3300046794 Bacteria 10841
222 Ga0495589_0025554 3300046794 Bacteria 2997
223 Ga0495600_0006948 3300046809 Bacteria 6906
224 Ga0495600_0027297 3300046809 Bacteria 3689
225 Ga0495660_0036754 3300046810 Bacteria 2730
226 Ga0495660_0087249 3300046810 Bacteria 1627
227 Ga0495581_0003598 3300047315 Bacteria 8916
228 Ga0495604_0083039 3300047317 Bacteria 2395
229 Ga0495604_0240376 3300047317 Bacteria 1238
230 Ga0495674_0090185 3300047319 Bacteria 2620
231 Ga0495672_0000055 3300047320 Bacteria 229428
232 Ga0495672_0000334 3300047320 Bacteria 61678
233 Ga0495680_0036120 3300047322 Bacteria 3971
234 Ga0495683_0000047 3300047323 Bacteria 126770
235 Ga0495683_0001260 3300047323 Bacteria 17172
236 Ga0495683_0009315 3300047323 Bacteria 5232
237 Ga0495683_0012991 3300047323 Bacteria 4362
238 Ga0495683_0024320 3300047323 Bacteria 3109
239 Ga0495687_004646 3300047443 Bacteria 9166
240 Ga0495687_006053 3300047443 Bacteria 7535
241 Ga0495675_0003845 3300047444 Bacteria 9091
242 Ga0495675_0085336 3300047444 Bacteria 1985
243 Ga0495675_0100311 3300047444 Bacteria 1812
244 Ga0495675_0105363 3300047444 Bacteria 1762
245 Ga0495677_0024061 3300047445 Bacteria 2209
246 Ga0495679_021354 3300047446 Bacteria 2237
247 Ga0495681_0006008 3300047470 Bacteria 8041
248 Ga0495681_0014315 3300047470 Bacteria 4552
249 Ga0495681_0050122 3300047470 Bacteria 1969
250 Ga0495684_0005498 3300047471 Bacteria 9863
251 Ga0495684_0080010 3300047471 Bacteria 2481
252 Ga0495686_0067641 3300047472 Bacteria 2205
253 Ga0495602_0023541 3300048088 Bacteria 5998
254 Ga0495614_0012132 3300048089 Bacteria 3784
255 Ga0495615_0006641 3300048090 Bacteria 2156
256 Ga0495626_0007108 3300048091 Bacteria 6269
257 Ga0495626_0010035 3300048091 Bacteria 5080
258 Ga0495626_0022935 3300048091 Bacteria 3079
259 Ga0495626_0028562 3300048091 Bacteria 2703
260 Ga0496101_0276128 3300048904 Bacteria 1313
261 Ga0496102_0016624 3300048905 Bacteria 6432
262 Ga0496103_0013140 3300048906 Bacteria 4910
263 Ga0496104_0049145 3300048907 Bacteria 3977
264 Ga0496105_0000572 3300048908 Bacteria 24357
265 Ga0496106_0070747 3300048909 Bacteria 2665
266 Ga0496109_0005079 3300048912 Bacteria 10995
267 Ga0496112_0454550 3300048915 Bacteria 1218
268 Ga0496113_0035251 3300048916 Bacteria 3658
269 Ga0496115_0041449 3300048918 Bacteria 3665
270 Ga0496116_0029951 3300048919 Bacteria 3917
271 Ga0496118_0004640 3300048921 Bacteria 16123
272 Ga0496118_0078902 3300048921 Bacteria 2326
273 Ga0496119_0000213 3300048922 Bacteria 82822
274 Ga0496121_0000089 3300048924 Bacteria 219007
275 Ga0496122_0000310 3300048925 Bacteria 107506
276 Ga0496123_0000312 3300048926 Bacteria 93478
277 Ga0496124_0006404 3300048927 Bacteria 12836
278 Ga0496124_0051408 3300048927 Bacteria 3507
279 Ga0496125_0002445 3300048928 Bacteria 24130
280 Ga0496125_0017213 3300048928 Bacteria 6908
281 Ga0496126_0003551 3300048929 Bacteria 19610
282 Ga0495678_000025 3300049459 Bacteria 227891
283 Ga0495678_000060 3300049459 Bacteria 142851
284 Ga0495678_000266 3300049459 Bacteria 57869
285 Ga0495678_000478 3300049459 Bacteria 39768
286 Ga0495678_003319 3300049459 Bacteria 10030
287 Ga0495682_0000035 3300049460 Bacteria 126349
288 Ga0501033_0048536 3300049570 Bacteria 3153
289 Ga0501039_0155236 3300049575 Bacteria 1798
290 Ga0501047_0068763 3300049581 Bacteria 3411
291 Ga0501035_0004764 3300049822 Bacteria 12883
292 Ga0501044_0008745 3300049823 Bacteria 11079
293 nmdc:mga06z11_126750_c1 3300050494 Bacteria 1429
294 Ga0495601_0093835 3300053077 Bacteria 1933
295 Ga0495595_0058539 3300053084 Bacteria 1799
296 Ga0500619_000140 3300053154 Bacteria 17787
297 2509130505 2508501125 Bacteria 7208311
298 2513592067 2513237087 Bacteria 5817514
299 2513958553 2513237151 Bacteria 6309801
300 2587756652 2585428062 Bacteria 6842168
301 2738822610 2738541296 Bacteria 7285013
302 2738834817 2738541298 Bacteria 7286732
303 2738876296 2738541306 Bacteria 7284992
304 2739188240 2738543002 Bacteria 7284546
305 2739222893 2738543008 Bacteria 7282815
306 2765570805 2765235838 Bacteria 5445269
307 2809146996 2808606418 Bacteria 6724496
308 2839099489 2839094727 Bacteria 5534556
309 2842715391 2842711865 Bacteria 7155354
310 2856288403 2856287931 Bacteria 7223934
311 2857367168 2857357740 Bacteria 9937880
312 2857554545 2857553236 Bacteria 6166726
313 2904486625 2904483920 Bacteria 7545285
314 2904508956 2904504865 Bacteria 5152820
315 2919527956 2919527303 Bacteria 7718827
316 2945940090 2945934425 Bacteria 7444609
317 2990707213 2990703756 Bacteria 7715990
318 642424168 641736151 Bacteria 7477263
319 8055269221 8055266321 Bacteria 7999742
320 8055304634 8055301274 Bacteria 8587385
321 Ga0495611_0061503
322 JGI25156J39149_1001371
323 JGI25165J46597_1000486
324 Ga0055533_1000069
325 Ga0055532_1000011
326 Ga0055527_1000009
327 Ga0055535_1000008
328 Ga0055542_1000014
329 Ga0055529_1000010
330 Ga0055537_1000060
331 Ga0055534_1000009
332 Ga0055528_1000012
333 Ga0065165_1001101
334 Ga0068869_100067079
335 Ga0068869_100221038
336 Ga0070687_100131586
337 Ga0070700_100181530
338 Ga0070694_100274530
339 Ga0068860_100000101
340 Ga0075365_10086273
341 Ga0075369_10047020
342 Ga0105247_10038533
343 Ga0105242_10339695
344 Ga0105239_10213099
345 Ga0157369_10085121
346 Ga0157369_10112282
347 Ga0157375_10246616
348 Ga0182008_10024550
349 Ga0213872_10007605
350 Ga0213872_10052789
351 Ga0209674_100011
352 Ga0209672_100002
353 Ga0209147_100003
354 Ga0209563_100359
355 Ga0207427_100366
356 Ga0209258_100005
357 Ga0209148_1000006
358 Ga0209759_1000006
359 Ga0209233_1000018
360 Ga0209565_1000015
361 Ga0209455_1000003
362 Ga0209673_1000017
363 Ga0209675_1000012
364 Ga0209564_1000016
365 Ga0209256_1000314
366 Ga0207647_10058044
367 Ga0207699_10123363
368 Ga0207643_10085049
369 Ga0207705_10222245
370 Ga0207671_10021491
371 Ga0207662_10138194
372 Ga0207664_10254473
373 Ga0207689_10015226
374 Ga0207708_10209699
375 Ga0207702_10021218
376 Ga0207683_10263894
377 Ga0209371_1014485
378 Ga0268264_10000030
379 Ga0307515_10000494
380 Ga0307515_10006378
381 Ga0307515_10069247
382 Ga0316181_1129545
383 Ga0265330_10010969
384 Ga0265330_10078938
385 Ga0265332_10028981
386 Ga0265325_10002402
387 Ga0265340_10026205
388 Ga0265340_10056986
389 Ga0265339_10001335
390 Ga0307513_10015655
391 Ga0307513_10186357
392 Ga0307509_10021794
393 Ga0307509_10118233
394 Ga0307509_10134844
395 Ga0265313_10047311
396 Ga0307508_10000096
397 Ga0307514_10059508
398 Ga0265342_10023680
399 Ga0307516_10039313
400 Ga0307412_10000082
401 Ga0307507_10013349
402 Ga0307507_10075739
403 Ga0373934_0028483
404 Ga0373923_0008265
405 Ga0373936_0082049
406 Ga0373953_0000542
407 Ga0373954_0000323
408 Ga0373956_0009107
409 Ga0373957_0053966
410 Ga0373955_0003057
411 Ga0373927_0026860
412 Ga0373933_0001324
413 Ga0373937_0007329
414 Ga0373925_0056541
415 Ga0436361_0080901
416 Ga0436361_0761768
417 Ga0451855_1673813
418 Ga0466966_0029942
419 Ga0466961_0009705
420 Ga0466963_0206981
421 Ga0466964_0001512
422 Ga0466971_0001325
423 Ga0466970_0010401
424 Ga0466957_0111331
425 Ga0466959_0006379
426 Ga0495617_036482
427 Ga0495627_000007
428 Ga0495592_0100630
429 Ga0495590_0000008
430 Ga0495590_0000129
431 Ga0495590_0046032
432 Ga0495591_000043
433 Ga0495629_0007954
434 Ga0495629_0018501
435 Ga0495638_0010290
436 Ga0495638_0065519
437 Ga0495651_0014174
438 Ga0495653_0002557
439 Ga0495653_0012104
440 Ga0495653_0051904
441 Ga0495650_0004658
442 Ga0495650_0013175
443 Ga0495582_0006013
444 Ga0495582_0078125
445 Ga0495605_0005848
446 Ga0495605_0044395
447 Ga0495639_0046250
448 Ga0495584_0000025
449 Ga0495585_0018187
450 Ga0495585_0057090
451 Ga0495594_0019236
452 Ga0495594_0103617
453 Ga0495596_0004602
454 Ga0495596_0008019
455 Ga0495596_0019695
456 Ga0495596_0028698
457 Ga0495607_0056610
458 Ga0495583_0000011
459 Ga0495583_0000512
460 Ga0495583_0004680
461 Ga0495583_0021509
462 Ga0495583_0035902
463 Ga0495606_0004752
464 Ga0495606_0076342
465 Ga0495606_0114502
466 Ga0495608_0012098
467 Ga0495608_0032622
468 Ga0495610_0000947
469 Ga0495610_0002865
470 Ga0495610_0012368
471 Ga0495610_0032601
472 Ga0495610_0074468
473 Ga0495616_0000107
474 Ga0495616_0000150
475 Ga0495616_0001459
476 Ga0495616_0020120
477 Ga0495616_0137246
478 Ga0495618_0014381
479 Ga0495628_0110865
480 Ga0495628_0124628
481 Ga0495630_0020232
482 Ga0495631_0000337
483 Ga0495631_0018991
484 Ga0495632_0000109
485 Ga0495632_0000115
486 Ga0495632_0028756
487 Ga0495637_0000009
488 Ga0495643_0000028
489 Ga0495643_0001116
490 Ga0495643_0003017
491 Ga0495643_0020548
492 Ga0495643_0027465
493 Ga0495644_0027030
494 Ga0495648_0017897
495 Ga0495666_0003121
496 Ga0495642_0000611
497 Ga0495652_0082676
498 Ga0495652_0101223
499 Ga0495654_0005383
500 Ga0495665_0015163
501 Ga0495640_0056229
502 Ga0495587_0005573
503 Ga0495587_0015245
504 Ga0495587_0041831
505 Ga0495609_0000647
506 Ga0495621_0011400
507 Ga0495597_0000762
508 Ga0495645_0114611
509 Ga0495622_0000092
510 Ga0495633_0000181
511 Ga0495633_0000925
512 Ga0495633_0004718
513 Ga0495668_0000018
514 Ga0495668_0004203
515 Ga0495668_0094643
516 Ga0495634_0011966
517 Ga0495634_0013304
518 Ga0495634_0018282
519 Ga0495625_0062259
520 Ga0495625_0147795
521 Ga0495635_0006348
522 Ga0495635_0009795
523 Ga0495661_0000292
524 Ga0495661_0019260
525 Ga0495661_0021365
526 Ga0495661_0102290
527 Ga0495661_0123968
528 Ga0495588_0077721
529 Ga0495657_0100215
530 Ga0495599_0004863
531 Ga0495599_0054892
532 Ga0495623_0005974
533 Ga0495623_0019869
534 Ga0495646_0008308
535 Ga0495646_0035121
536 Ga0495669_0000304
537 Ga0495670_0005476
538 Ga0495649_0000028
539 Ga0495649_0028354
540 Ga0495649_0073883
541 Ga0495589_0002249
542 Ga0495589_0025554
543 Ga0495600_0006948
544 Ga0495600_0027297
545 Ga0495660_0036754
546 Ga0495660_0087249
547 Ga0495581_0003598
548 Ga0495604_0083039
549 Ga0495604_0240376
550 Ga0495674_0090185
551 Ga0495672_0000055
552 Ga0495672_0000334
553 Ga0495680_0036120
554 Ga0495683_0000047
555 Ga0495683_0001260
556 Ga0495683_0009315
557 Ga0495683_0012991
558 Ga0495683_0024320
559 Ga0495687_004646
560 Ga0495687_006053
561 Ga0495675_0003845
562 Ga0495675_0085336
563 Ga0495675_0100311
564 Ga0495675_0105363
565 Ga0495677_0024061
566 Ga0495679_021354
567 Ga0495681_0006008
568 Ga0495681_0014315
569 Ga0495681_0050122
570 Ga0495684_0005498
571 Ga0495684_0080010
572 Ga0495686_0067641
573 Ga0495602_0023541
574 Ga0495614_0012132
575 Ga0495615_0006641
576 Ga0495626_0007108
577 Ga0495626_0010035
578 Ga0495626_0022935
579 Ga0495626_0028562
580 Ga0496101_0276128
581 Ga0496102_0016624
582 Ga0496103_0013140
583 Ga0496104_0049145
584 Ga0496105_0000572
585 Ga0496106_0070747
586 Ga0496109_0005079
587 Ga0496112_0454550
588 Ga0496113_0035251
589 Ga0496115_0041449
590 Ga0496116_0029951
591 Ga0496118_0004640
592 Ga0496118_0078902
593 Ga0496119_0000213
594 Ga0496121_0000089
595 Ga0496122_0000310
596 Ga0496123_0000312
597 Ga0496124_0006404
598 Ga0496124_0051408
599 Ga0496125_0002445
600 Ga0496125_0017213
601 Ga0496126_0003551
602 Ga0495678_000025
603 Ga0495678_000060
604 Ga0495678_000266
605 Ga0495678_000478
606 Ga0495678_003319
607 Ga0495682_0000035
608 Ga0501033_0048536
609 Ga0501039_0155236
610 Ga0501047_0068763
611 Ga0501035_0004764
612 Ga0501044_0008745
613 nmdc:mga06z11_126750_c1
614 Ga0495601_0093835
615 Ga0495595_0058539
616 Ga0500619_000140
617 2509130505
618 2513592067
619 2513958553
620 2587756652
621 2738822610
622 2738834817
623 2738876296
624 2739188240
625 2739222893
626 2765570805
627 2809146996
628 2839099489
629 2842715391
630 2856288403
631 2857367168
632 2857554545
633 2904486625
634 2904508956
635 2919527956
636 2945940090
637 2990707213
638 642424168
639 8055269221
640 8055304634

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04303

PrpF

PrpF protein

42

401

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6otv-assembly1.cif.gz_A crystal structure of putative isomerase ec2056 0.8828 8 360
6otv-assembly1.cif.gz_A crystal structure of putative isomerase ec2056 0.8758 8 360
3g7k-assembly3.cif.gz_C crystal structure of methylitaconate-delta-isomerase 0.8741 5 363
3g7k-assembly3.cif.gz_C crystal structure of methylitaconate-delta-isomerase 0.8593 5 363
6p3j-assembly1.cif.gz_B crystal structure of ligu 0.8461 2 360
ID Description Score Start End Superfamily
af_P0AAV8_1_178_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9491 7 173 3.10.310.10
3g7kB01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9417 5 173 3.10.310.10
af_P0AAV8_179_330_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9291 184 335 3.10.310.10
2pvzA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.919 6 170 3.10.310.10
af_P0AAV8_179_330_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9115 184 335 3.10.310.10
ID Description Score Start End GO Terms
AF-K9NK90-F1-model_v4 deleted 0.996 201 275
AF-A0A377XGZ1-F1-model_v4 FldA protein 0.9947 187 291 GO:0016853
AF-A0A441XJS6-F1-model_v4 4-oxalomesaconate tautomerase 0.9836 179 254 GO:0016853
AF-A0A2M8Q6N3-F1-model_v4 4-oxalomesaconate tautomerase 0.9777 181 299 GO:0016853
AF-A0A3S4JUN3-F1-model_v4 PrpF protein 0.9726 186 283 GO:0016853

Map