F405804

General Info

Members Datasets Scaffolds Average Seq Length
321 205 642 426

Family's Representative Sequence

Representative Sequence 3300003759|Ga0055525_1000025|Ga0055525_1000025121
Length 465
Sequence MRTPVAYRVRPSLAGSTRHRDANEERHAAPPGFHCFYTRTHTTCRNGAAMNVVVLGAGVVGTATAWYLAEAGHDVTVIERQPGPAQETSFANGCQISVSHAEPWATPAGLVKVLRSLGREDAPLLFRLRADPLQWRWCLQFVRECAPGRVAANLRQIVALADYSRRSLQALRARTGIAYDDLTRGILHFYTDEREFAHASRAAAAMRELGCPRMTIDADEAVRIEPALASVRRQLVGADFTASDESGDVYRFTSQLAARGAAAGIRFLYNTTATRLREAGGSVDAVEIIDAAGRHRLLEADAVVVALGSFSVQLLAPLGIRLMIYPGKGYSATYPIVDPATAPTVSLTDDGHKLVFSRLGDRLRVAGTCELNGYTRDLNPVRCAAITRRVRTLFPGACDYDNATYWAGLRPLTPSNVPYVGRTRLANLYLNTGHGTLGWTMGCGSGRAIADIVSGRRPGVDFAFS

Samples

Sample ID Description Type Environment
1 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
39 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
45 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
47 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
88 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
89 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
111 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
112 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
124 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
125 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
128 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
129 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
140 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
144 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
145 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
149 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
188 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
189 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
190 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
197 2643221556 Massilia sp. Root1485 Isolate Unclassified
198 2643221684 Massilia sp. Root133 Isolate Unclassified
199 2738541337 Pelomonas sp. BT06 Isolate Unclassified
200 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
201 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
202 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
203 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
204 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
205 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.88
Metatranscriptomes 0
Isolates 3.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.33
Nodule 0
Rhizoplane 2.8
Rhizosphere 71.96
Stem 0
Stem Tuber 0
Unclassified 2.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055525_1000025 3300003759 Bacteria 347582
2 JGI25155J39150_1000031 3300002704 Bacteria 106418
3 JGI25156J39149_1000040 3300002705 Bacteria 106617
4 JGI25154J39366_1000060 3300002738 Bacteria 106617
5 JGI25157J39369_1000058 3300002741 Bacteria 106617
6 JGI25159J45721_1004267 3300002987 Bacteria 4803
7 JGI25151J46595_10007915 3300003187 Bacteria 5157
8 rootL2_10005300 3300003322 Bacteria 5885
9 rootL2_10123213 3300003322 Bacteria 7776
10 rootL2_10208348 3300003322 Bacteria 3777
11 rootH1_10002958 3300003323 Bacteria 6924
12 Ga0055537_1000265 3300003773 Bacteria 38230
13 Ga0055537_1008626 3300003773 Bacteria 2331
14 Ga0055524_1000338 3300003775 Bacteria 43287
15 Ga0055536_1014429 3300003781 Bacteria 2774
16 Ga0055534_1000911 3300003784 Bacteria 13330
17 Ga0055528_1001390 3300003790 Bacteria 14863
18 Ga0055530_10000509 3300003791 Bacteria 33816
19 Ga0055540_1000274 3300003792 Bacteria 46571
20 Ga0055531_10011422 3300003794 Bacteria 4283
21 Ga0065165_1016831 3300005262 Bacteria 2719
22 Ga0065165_1018713 3300005262 Bacteria 2497
23 Ga0070658_10048184 3300005327 Bacteria 3449
24 Ga0070658_10098815 3300005327 Bacteria 2411
25 Ga0070660_100007922 3300005339 Bacteria 7413
26 Ga0070660_100024727 3300005339 Bacteria 4458
27 Ga0070659_100021259 3300005366 Bacteria 4938
28 Ga0070659_100091473 3300005366 Bacteria 2438
29 Ga0070694_100014799 3300005444 Bacteria 4887
30 Ga0070696_100006451 3300005546 Bacteria 7844
31 Ga0070696_100051406 3300005546 Bacteria 2866
32 Ga0070693_100039301 3300005547 Bacteria 2650
33 Ga0070704_100004457 3300005549 Bacteria 8086
34 Ga0070704_100030354 3300005549 Bacteria 3621
35 Ga0068855_100003385 3300005563 Bacteria 19519
36 Ga0075428_100062144 3300006844 Bacteria 4089
37 Ga0075430_100025706 3300006846 Bacteria 5010
38 Ga0075431_100016340 3300006847 Bacteria 7528
39 Ga0075434_100156857 3300006871 Bacteria 2295
40 Ga0075429_100002389 3300006880 Bacteria 15821
41 Ga0111539_10079269 3300009094 Bacteria 3863
42 Ga0114129_10036770 3300009147 Bacteria 6913
43 Ga0105241_10021708 3300009174 Bacteria 4749
44 Ga0105242_10023296 3300009176 Bacteria 4880
45 Ga0182008_10000951 3300014497 Bacteria 20187
46 Ga0182006_1000053 3300015261 Bacteria 180648
47 Ga0182007_10000260 3300015262 Bacteria 35302
48 Ga0182005_1000031 3300015265 Bacteria 202902
49 Ga0213872_10026853 3300021361 Bacteria 2645
50 Ga0209435_100019 3300025206 Bacteria 260989
51 Ga0209563_100003 3300025230 Bacteria 1932942
52 Ga0209646_1000038 3300025246 Bacteria 353982
53 Ga0209026_1000048 3300025250 Bacteria 257264
54 Ga0209148_1000365 3300025254 Bacteria 56504
55 Ga0209759_1000038 3300025256 Bacteria 257264
56 Ga0209129_1006479 3300025258 Bacteria 3767
57 Ga0209565_1000309 3300025263 Bacteria 45428
58 Ga0209673_1000088 3300025273 Bacteria 204629
59 Ga0209130_1000920 3300025284 Bacteria 23688
60 Ga0209675_1000133 3300025291 Bacteria 101207
61 Ga0209675_1006222 3300025291 Bacteria 4834
62 Ga0209676_1001499 3300025292 Bacteria 21342
63 Ga0209676_1002299 3300025292 Bacteria 13921
64 Ga0209025_1002618 3300025294 Bacteria 18479
65 Ga0209025_1003677 3300025294 Bacteria 14173
66 Ga0209025_1004241 3300025294 Bacteria 12621
67 Ga0209025_1013074 3300025294 Bacteria 5247
68 Ga0209564_1000702 3300025295 Bacteria 49036
69 Ga0209564_1005732 3300025295 Bacteria 6947
70 Ga0209758_1001209 3300025297 Bacteria 32513
71 Ga0209758_1015254 3300025297 Bacteria 3999
72 Ga0209758_1041847 3300025297 Bacteria 1707
73 Ga0209050_1000008 3300025298 Bacteria 1144179
74 Ga0209256_1000096 3300025299 Bacteria 204629
75 Ga0207426_1001970 3300025302 Bacteria 14580
76 Ga0209051_1000005 3300025303 Bacteria 1142353
77 Ga0209257_1000031 3300025304 Bacteria 688770
78 Ga0207705_10005348 3300025909 Bacteria 9600
79 Ga0207657_10007996 3300025919 Bacteria 10779
80 Ga0207690_10012566 3300025932 Bacteria 5068
81 Ga0207690_10030947 3300025932 Bacteria 3419
82 Ga0207686_10008750 3300025934 Bacteria 5469
83 Ga0207679_10057919 3300025945 Bacteria 2868
84 Ga0207668_10048544 3300025972 Bacteria 2914
85 Ga0207428_10059266 3300027907 Bacteria 3036
86 Ga0265338_10031913 3300028800 Bacteria 5153
87 Ga0307511_10002368 3300030521 Bacteria 19710
88 Ga0265320_10001382 3300031240 Bacteria 17639
89 Ga0265316_10059698 3300031344 Bacteria 2965
90 Ga0307513_10000256 3300031456 Bacteria 76296
91 Ga0307513_10047256 3300031456 Bacteria 4683
92 Ga0307509_10000138 3300031507 Bacteria 108694
93 Ga0265313_10002038 3300031595 Bacteria 18131
94 Ga0265314_10004356 3300031711 Bacteria 13178
95 Ga0265314_10105549 3300031711 Bacteria 1801
96 Ga0307406_10204307 3300031901 Bacteria 1457
97 Ga0307412_10108961 3300031911 Bacteria 1974
98 Ga0307412_10177805 3300031911 Bacteria 1597
99 Ga0373942_0002336 3300035207 Bacteria 4624
100 Ga0395899_0007981 3300037312 Bacteria 8152
101 Ga0395899_0043556 3300037312 Bacteria 3348
102 Ga0395899_0043983 3300037312 Bacteria 3328
103 Ga0395899_0061929 3300037312 Bacteria 2755
104 Ga0395900_0000961 3300037418 Bacteria 37565
105 Ga0395900_0006217 3300037418 Bacteria 12469
106 Ga0395900_0021009 3300037418 Bacteria 6672
107 Ga0395900_0030710 3300037418 Bacteria 5517
108 Ga0395900_0054899 3300037418 Bacteria 4101
109 Ga0395900_0237827 3300037418 Bacteria 1828
110 Ga0395898_0055654 3300037466 Bacteria 3858
111 Ga0395898_0106194 3300037466 Bacteria 2693
112 Ga0395898_0171166 3300037466 Bacteria 2076
113 Ga0395905_0073485 3300037471 Bacteria 3205
114 Ga0395905_0285511 3300037471 Bacteria 1537
115 Ga0395901_0000089 3300038443 Bacteria 124305
116 Ga0395901_0009577 3300038443 Bacteria 9830
117 Ga0395901_0017298 3300038443 Bacteria 7359
118 Ga0395901_0110819 3300038443 Bacteria 2882
119 Ga0395901_0209477 3300038443 Bacteria 2041
120 Ga0436360_0123774 3300039438 Bacteria 3732
121 Ga0436361_0075587 3300039447 Bacteria 3823
122 Ga0436361_0114489 3300039447 Bacteria 8530
123 Ga0436361_0576692 3300039447 Bacteria 2357
124 Ga0436361_0594466 3300039447 Bacteria 2760
125 Ga0436361_0870840 3300039447 Bacteria 1835
126 Ga0436361_1106567 3300039447 Bacteria 30825
127 Ga0439448_0000834 3300042005 Bacteria 7493
128 Ga0439448_0008081 3300042005 Bacteria 3071
129 Ga0439450_019513 3300042008 Bacteria 1437
130 Ga0439455_0001315 3300042012 Bacteria 4091
131 Ga0450898_004916 3300042134 Bacteria 1997
132 Ga0451577_0053596 3300042876 Bacteria 3600
133 Ga0466969_0023651 3300044656 Bacteria 3164
134 Ga0466969_0058338 3300044656 Bacteria 1879
135 Ga0466969_0075545 3300044656 Bacteria 1615
136 Ga0466972_0002626 3300044658 Bacteria 8899
137 Ga0466965_0005489 3300044683 Bacteria 5719
138 Ga0466965_0014450 3300044683 Bacteria 3737
139 Ga0466965_0018499 3300044683 Bacteria 3340
140 Ga0466966_0012123 3300044684 Bacteria 5710
141 Ga0466966_0045519 3300044684 Bacteria 2805
142 Ga0466964_0000711 3300044706 Bacteria 10757
143 Ga0466964_0003111 3300044706 Bacteria 6034
144 Ga0453684_0000006 3300044712 Bacteria 1364191
145 Ga0453684_0000031 3300044712 Bacteria 752632
146 Ga0453684_0009746 3300044712 Bacteria 16684
147 Ga0453684_0139834 3300044712 Bacteria 2893
148 Ga0466968_0005330 3300044735 Bacteria 4811
149 Ga0466957_0010953 3300044842 Bacteria 5215
150 Ga0466957_0015226 3300044842 Bacteria 4491
151 Ga0466957_0027509 3300044842 Bacteria 3380
152 Ga0466959_0017939 3300045049 Bacteria 5192
153 Ga0451576_0004201 3300045051 Bacteria 18947
154 Ga0466958_0003687 3300045836 Bacteria 7998
155 Ga0466958_0016165 3300045836 Bacteria 4294
156 Ga0466958_0072028 3300045836 Bacteria 2116
157 Ga0466967_0023688 3300045976 Bacteria 5035
158 Ga0495629_0075421 3300046459 Unclassified 2355
159 Ga0495638_0004695 3300046460 Bacteria 10325
160 Ga0495641_0049977 3300046461 Unclassified 1913
161 Ga0495653_0015719 3300046463 Bacteria 6170
162 Ga0495650_0022172 3300046471 Bacteria 3051
163 Ga0495580_0085061 3300046472 Unclassified 2203
164 Ga0495582_0069200 3300046473 Bacteria 1951
165 Ga0495605_0000283 3300046474 Bacteria 56316
166 Ga0495584_0000060 3300046491 Bacteria 79675
167 Ga0495584_0006569 3300046491 Bacteria 6079
168 Ga0495584_0043664 3300046491 Bacteria 2262
169 Ga0495585_0000409 3300046492 Bacteria 41603
170 Ga0495585_0019457 3300046492 Bacteria 3914
171 Ga0495594_0051153 3300046499 Unclassified 2273
172 Ga0495596_0000173 3300046500 Bacteria 44841
173 Ga0495607_0000400 3300046501 Bacteria 44002
174 Ga0495607_0010450 3300046501 Bacteria 6239
175 Ga0495583_0000009 3300046506 Bacteria 372527
176 Ga0495583_0000068 3300046506 Bacteria 188922
177 Ga0495583_0003144 3300046506 Bacteria 13029
178 Ga0495583_0005693 3300046506 Bacteria 8378
179 Ga0495583_0013116 3300046506 Bacteria 4643
180 Ga0495606_0020665 3300046507 Bacteria 4845
181 Ga0495606_0031972 3300046507 Bacteria 3652
182 Ga0495616_0014968 3300046513 Bacteria 4325
183 Ga0495616_0025535 3300046513 Bacteria 3154
184 Ga0495632_0000033 3300046519 Bacteria 164240
185 Ga0495637_0012759 3300046520 Bacteria 4010
186 Ga0495643_0001875 3300046522 Bacteria 17824
187 Ga0495643_0018960 3300046522 Bacteria 3985
188 Ga0495648_0007375 3300046524 Bacteria 8810
189 Ga0495648_0020709 3300046524 Bacteria 4578
190 Ga0495648_0024291 3300046524 Bacteria 4131
191 Ga0495666_0000849 3300046526 Bacteria 14167
192 Ga0495642_0000310 3300046528 Bacteria 27036
193 Ga0495642_0010766 3300046528 Bacteria 3504
194 Ga0495654_0027109 3300046530 Bacteria 2940
195 Ga0495665_0028936 3300046531 Bacteria 2969
196 Ga0495665_0060360 3300046531 Bacteria 2002
197 Ga0495665_0108940 3300046531 Bacteria 1453
198 Ga0495586_0029856 3300046535 Bacteria 2918
199 Ga0495586_0059353 3300046535 Bacteria 2079
200 Ga0495609_0000001 3300046538 Bacteria 1060094
201 Ga0495609_0002490 3300046538 Bacteria 11315
202 Ga0495609_0003770 3300046538 Bacteria 8547
203 Ga0495609_0009878 3300046538 Bacteria 4601
204 Ga0495622_0027854 3300046557 Bacteria 2637
205 Ga0495622_0092327 3300046557 Bacteria 1390
206 Ga0495633_0000505 3300046558 Bacteria 39311
207 Ga0495668_0014145 3300046616 Bacteria 4689
208 Ga0495611_0006914 3300046648 Bacteria 4823
209 Ga0495611_0048979 3300046648 Bacteria 1900
210 Ga0495625_0033305 3300046660 Bacteria 3812
211 Ga0495625_0043833 3300046660 Bacteria 3242
212 Ga0495635_0019415 3300046663 Bacteria 4738
213 Ga0495661_0000023 3300046665 Bacteria 189053
214 Ga0495661_0010014 3300046665 Bacteria 6480
215 Ga0495661_0021997 3300046665 Bacteria 4149
216 Ga0495661_0025546 3300046665 Bacteria 3813
217 Ga0495661_0095583 3300046665 Bacteria 1682
218 Ga0495588_0000089 3300046674 Bacteria 191894
219 Ga0495588_0074517 3300046674 Bacteria 1767
220 Ga0495589_0000027 3300046794 Bacteria 181084
221 Ga0495589_0000034 3300046794 Bacteria 162449
222 Ga0495589_0032128 3300046794 Bacteria 2640
223 Ga0495660_0000054 3300046810 Bacteria 135325
224 Ga0495660_0046715 3300046810 Bacteria 2373
225 Ga0495604_0019016 3300047317 Bacteria 5501
226 Ga0495604_0061541 3300047317 Bacteria 2871
227 Ga0495636_0014254 3300047318 Bacteria 3159
228 Ga0495636_0045443 3300047318 Bacteria 1830
229 Ga0495674_0127284 3300047319 Unclassified 2148
230 Ga0495672_0005334 3300047320 Bacteria 10231
231 Ga0495676_0046847 3300047321 Bacteria 3504
232 Ga0495676_0071396 3300047321 Unclassified 2669
233 Ga0495680_0020260 3300047322 Bacteria 5599
234 Ga0495683_0017127 3300047323 Bacteria 3758
235 Ga0495683_0027872 3300047323 Bacteria 2888
236 Ga0495687_000002 3300047443 Bacteria 1085770
237 Ga0495687_000019 3300047443 Bacteria 341756
238 Ga0495687_000023 3300047443 Bacteria 317750
239 Ga0495687_001139 3300047443 Bacteria 25776
240 Ga0495675_0028069 3300047444 Bacteria 3587
241 Ga0495675_0097865 3300047444 Bacteria 1838
242 Ga0495677_0000055 3300047445 Bacteria 64238
243 Ga0495677_0038200 3300047445 Bacteria 1754
244 Ga0495685_043557 3300047447 Bacteria 1531
245 Ga0495681_0025668 3300047470 Bacteria 3079
246 Ga0495593_0026523 3300047673 Bacteria 3198
247 Ga0495593_0032008 3300047673 Bacteria 2869
248 Ga0495626_0000215 3300048091 Bacteria 68964
249 Ga0495626_0000417 3300048091 Bacteria 43590
250 Ga0495626_0000969 3300048091 Bacteria 24775
251 Ga0496102_0007230 3300048905 Bacteria 9477
252 Ga0496102_0056188 3300048905 Bacteria 3590
253 Ga0496102_0169885 3300048905 Bacteria 2053
254 Ga0496106_0006398 3300048909 Bacteria 8718
255 Ga0496110_0115254 3300048913 Bacteria 2419
256 Ga0496111_0178190 3300048914 Bacteria 1580
257 Ga0496111_0190016 3300048914 Bacteria 1527
258 Ga0496113_0003842 3300048916 Bacteria 9087
259 Ga0496117_0000032 3300048920 Bacteria 375533
260 Ga0496118_0000027 3300048921 Bacteria 375533
261 Ga0496121_0005674 3300048924 Bacteria 15874
262 Ga0496121_0023036 3300048924 Bacteria 6017
263 Ga0496121_0059383 3300048924 Bacteria 3154
264 Ga0496122_0001045 3300048925 Bacteria 48493
265 Ga0496122_0003301 3300048925 Bacteria 21353
266 Ga0496122_0048551 3300048925 Bacteria 3261
267 Ga0496123_0003998 3300048926 Bacteria 15952
268 Ga0496123_0059085 3300048926 Bacteria 2482
269 Ga0496123_0060186 3300048926 Bacteria 2450
270 Ga0496124_0011347 3300048927 Bacteria 8909
271 Ga0496124_0037952 3300048927 Bacteria 4185
272 Ga0496124_0105781 3300048927 Bacteria 2273
273 Ga0496125_0058956 3300048928 Bacteria 3096
274 Ga0501034_0092763 3300049571 Bacteria 3016
275 Ga0501038_0244874 3300049574 Bacteria 1422
276 Ga0501039_0008067 3300049575 Bacteria 8023
277 Ga0501046_0029258 3300049580 Bacteria 4479
278 Ga0501047_0076292 3300049581 Bacteria 3226
279 Ga0501071_0027075 3300049587 Bacteria 4031
280 Ga0501075_0000093 3300049591 Bacteria 41092
281 Ga0501075_0013154 3300049591 Bacteria 5900
282 Ga0501076_0008706 3300049592 Bacteria 7451
283 Ga0501076_0023821 3300049592 Bacteria 4724
284 Ga0501077_0034418 3300049593 Bacteria 3225
285 Ga0501077_0158083 3300049593 Bacteria 1439
286 Ga0501079_0051145 3300049741 Bacteria 3189
287 Ga0501080_0102141 3300049742 Bacteria 2660
288 Ga0501035_0001080 3300049822 Bacteria 28569
289 Ga0501045_0000534 3300049824 Bacteria 23777
290 nmdc:mga0k408_132036_c1 3300050493 Bacteria 1482
291 nmdc:mga05p37_142962_c1 3300050507 Bacteria 2931
292 nmdc:mga05p37_7122_c1 3300050507 Bacteria 13185
293 nmdc:mga09592_18777_c1 3300050508 Bacteria 5672
294 nmdc:mga09592_61_c1 3300050508 Bacteria 60866
295 nmdc:mga0qj67_8818_c1 3300050509 Bacteria 7484
296 nmdc:mga06r32_4078_c1 3300050510 Bacteria 13093
297 nmdc:mga06r32_5054_c1 3300050510 Bacteria 11879
298 nmdc:mga08y16_59204_c1 3300050511 Bacteria 4002
299 nmdc:mga0n895_13442_c1 3300050512 Bacteria 7386
300 nmdc:mga0a205_22871_c1 3300050515 Bacteria 5257
301 Ga0495619_0081196 3300053085 Unclassified 2183
302 Ga0500646_0000776 3300053090 Bacteria 8981
303 Ga0500593_000339 3300053117 Bacteria 18810
304 Ga0500593_000932 3300053117 Bacteria 10817
305 Ga0500655_002973 3300053133 Bacteria 3075
306 Ga0500604_0001972 3300053151 Bacteria 5698
307 Ga0500645_000422 3300053730 Bacteria 29281
308 Ga0501084_0012849 3300054114 Bacteria 6937
309 Ga0500661_000540 3300055283 Bacteria 7047
310 Ga0501082_0010612 3300060353 Bacteria 7929
311 Ga0530510_0000686 3300061734 Bacteria 21870
312 2601670227 2600255292 Bacteria 6300551
313 2643799206 2643221556 Bacteria 7251154
314 2644473461 2643221684 Bacteria 7145183
315 2739057791 2738541337 Bacteria 6183410
316 2809143172 2808606418 Bacteria 6724496
317 2857552200 2857547612 Bacteria 6179999
318 2885082921 2885080285 Bacteria 6355622
319 2932413737 2932410948 Bacteria 6312192
320 2932417797 2932416698 Bacteria 6315112
321 8047679183 8047673197 Bacteria 7395230
322 Ga0055525_1000025
323 JGI25155J39150_1000031
324 JGI25156J39149_1000040
325 JGI25154J39366_1000060
326 JGI25157J39369_1000058
327 JGI25159J45721_1004267
328 JGI25151J46595_10007915
329 rootL2_10005300
330 rootL2_10123213
331 rootL2_10208348
332 rootH1_10002958
333 Ga0055537_1000265
334 Ga0055537_1008626
335 Ga0055524_1000338
336 Ga0055536_1014429
337 Ga0055534_1000911
338 Ga0055528_1001390
339 Ga0055530_10000509
340 Ga0055540_1000274
341 Ga0055531_10011422
342 Ga0065165_1016831
343 Ga0065165_1018713
344 Ga0070658_10048184
345 Ga0070658_10098815
346 Ga0070660_100007922
347 Ga0070660_100024727
348 Ga0070659_100021259
349 Ga0070659_100091473
350 Ga0070694_100014799
351 Ga0070696_100006451
352 Ga0070696_100051406
353 Ga0070693_100039301
354 Ga0070704_100004457
355 Ga0070704_100030354
356 Ga0068855_100003385
357 Ga0075428_100062144
358 Ga0075430_100025706
359 Ga0075431_100016340
360 Ga0075434_100156857
361 Ga0075429_100002389
362 Ga0111539_10079269
363 Ga0114129_10036770
364 Ga0105241_10021708
365 Ga0105242_10023296
366 Ga0182008_10000951
367 Ga0182006_1000053
368 Ga0182007_10000260
369 Ga0182005_1000031
370 Ga0213872_10026853
371 Ga0209435_100019
372 Ga0209563_100003
373 Ga0209646_1000038
374 Ga0209026_1000048
375 Ga0209148_1000365
376 Ga0209759_1000038
377 Ga0209129_1006479
378 Ga0209565_1000309
379 Ga0209673_1000088
380 Ga0209130_1000920
381 Ga0209675_1000133
382 Ga0209675_1006222
383 Ga0209676_1001499
384 Ga0209676_1002299
385 Ga0209025_1002618
386 Ga0209025_1003677
387 Ga0209025_1004241
388 Ga0209025_1013074
389 Ga0209564_1000702
390 Ga0209564_1005732
391 Ga0209758_1001209
392 Ga0209758_1015254
393 Ga0209758_1041847
394 Ga0209050_1000008
395 Ga0209256_1000096
396 Ga0207426_1001970
397 Ga0209051_1000005
398 Ga0209257_1000031
399 Ga0207705_10005348
400 Ga0207657_10007996
401 Ga0207690_10012566
402 Ga0207690_10030947
403 Ga0207686_10008750
404 Ga0207679_10057919
405 Ga0207668_10048544
406 Ga0207428_10059266
407 Ga0265338_10031913
408 Ga0307511_10002368
409 Ga0265320_10001382
410 Ga0265316_10059698
411 Ga0307513_10000256
412 Ga0307513_10047256
413 Ga0307509_10000138
414 Ga0265313_10002038
415 Ga0265314_10004356
416 Ga0265314_10105549
417 Ga0307406_10204307
418 Ga0307412_10108961
419 Ga0307412_10177805
420 Ga0373942_0002336
421 Ga0395899_0007981
422 Ga0395899_0043556
423 Ga0395899_0043983
424 Ga0395899_0061929
425 Ga0395900_0000961
426 Ga0395900_0006217
427 Ga0395900_0021009
428 Ga0395900_0030710
429 Ga0395900_0054899
430 Ga0395900_0237827
431 Ga0395898_0055654
432 Ga0395898_0106194
433 Ga0395898_0171166
434 Ga0395905_0073485
435 Ga0395905_0285511
436 Ga0395901_0000089
437 Ga0395901_0009577
438 Ga0395901_0017298
439 Ga0395901_0110819
440 Ga0395901_0209477
441 Ga0436360_0123774
442 Ga0436361_0075587
443 Ga0436361_0114489
444 Ga0436361_0576692
445 Ga0436361_0594466
446 Ga0436361_0870840
447 Ga0436361_1106567
448 Ga0439448_0000834
449 Ga0439448_0008081
450 Ga0439450_019513
451 Ga0439455_0001315
452 Ga0450898_004916
453 Ga0451577_0053596
454 Ga0466969_0023651
455 Ga0466969_0058338
456 Ga0466969_0075545
457 Ga0466972_0002626
458 Ga0466965_0005489
459 Ga0466965_0014450
460 Ga0466965_0018499
461 Ga0466966_0012123
462 Ga0466966_0045519
463 Ga0466964_0000711
464 Ga0466964_0003111
465 Ga0453684_0000006
466 Ga0453684_0000031
467 Ga0453684_0009746
468 Ga0453684_0139834
469 Ga0466968_0005330
470 Ga0466957_0010953
471 Ga0466957_0015226
472 Ga0466957_0027509
473 Ga0466959_0017939
474 Ga0451576_0004201
475 Ga0466958_0003687
476 Ga0466958_0016165
477 Ga0466958_0072028
478 Ga0466967_0023688
479 Ga0495629_0075421
480 Ga0495638_0004695
481 Ga0495641_0049977
482 Ga0495653_0015719
483 Ga0495650_0022172
484 Ga0495580_0085061
485 Ga0495582_0069200
486 Ga0495605_0000283
487 Ga0495584_0000060
488 Ga0495584_0006569
489 Ga0495584_0043664
490 Ga0495585_0000409
491 Ga0495585_0019457
492 Ga0495594_0051153
493 Ga0495596_0000173
494 Ga0495607_0000400
495 Ga0495607_0010450
496 Ga0495583_0000009
497 Ga0495583_0000068
498 Ga0495583_0003144
499 Ga0495583_0005693
500 Ga0495583_0013116
501 Ga0495606_0020665
502 Ga0495606_0031972
503 Ga0495616_0014968
504 Ga0495616_0025535
505 Ga0495632_0000033
506 Ga0495637_0012759
507 Ga0495643_0001875
508 Ga0495643_0018960
509 Ga0495648_0007375
510 Ga0495648_0020709
511 Ga0495648_0024291
512 Ga0495666_0000849
513 Ga0495642_0000310
514 Ga0495642_0010766
515 Ga0495654_0027109
516 Ga0495665_0028936
517 Ga0495665_0060360
518 Ga0495665_0108940
519 Ga0495586_0029856
520 Ga0495586_0059353
521 Ga0495609_0000001
522 Ga0495609_0002490
523 Ga0495609_0003770
524 Ga0495609_0009878
525 Ga0495622_0027854
526 Ga0495622_0092327
527 Ga0495633_0000505
528 Ga0495668_0014145
529 Ga0495611_0006914
530 Ga0495611_0048979
531 Ga0495625_0033305
532 Ga0495625_0043833
533 Ga0495635_0019415
534 Ga0495661_0000023
535 Ga0495661_0010014
536 Ga0495661_0021997
537 Ga0495661_0025546
538 Ga0495661_0095583
539 Ga0495588_0000089
540 Ga0495588_0074517
541 Ga0495589_0000027
542 Ga0495589_0000034
543 Ga0495589_0032128
544 Ga0495660_0000054
545 Ga0495660_0046715
546 Ga0495604_0019016
547 Ga0495604_0061541
548 Ga0495636_0014254
549 Ga0495636_0045443
550 Ga0495674_0127284
551 Ga0495672_0005334
552 Ga0495676_0046847
553 Ga0495676_0071396
554 Ga0495680_0020260
555 Ga0495683_0017127
556 Ga0495683_0027872
557 Ga0495687_000002
558 Ga0495687_000019
559 Ga0495687_000023
560 Ga0495687_001139
561 Ga0495675_0028069
562 Ga0495675_0097865
563 Ga0495677_0000055
564 Ga0495677_0038200
565 Ga0495685_043557
566 Ga0495681_0025668
567 Ga0495593_0026523
568 Ga0495593_0032008
569 Ga0495626_0000215
570 Ga0495626_0000417
571 Ga0495626_0000969
572 Ga0496102_0007230
573 Ga0496102_0056188
574 Ga0496102_0169885
575 Ga0496106_0006398
576 Ga0496110_0115254
577 Ga0496111_0178190
578 Ga0496111_0190016
579 Ga0496113_0003842
580 Ga0496117_0000032
581 Ga0496118_0000027
582 Ga0496121_0005674
583 Ga0496121_0023036
584 Ga0496121_0059383
585 Ga0496122_0001045
586 Ga0496122_0003301
587 Ga0496122_0048551
588 Ga0496123_0003998
589 Ga0496123_0059085
590 Ga0496123_0060186
591 Ga0496124_0011347
592 Ga0496124_0037952
593 Ga0496124_0105781
594 Ga0496125_0058956
595 Ga0501034_0092763
596 Ga0501038_0244874
597 Ga0501039_0008067
598 Ga0501046_0029258
599 Ga0501047_0076292
600 Ga0501071_0027075
601 Ga0501075_0000093
602 Ga0501075_0013154
603 Ga0501076_0008706
604 Ga0501076_0023821
605 Ga0501077_0034418
606 Ga0501077_0158083
607 Ga0501079_0051145
608 Ga0501080_0102141
609 Ga0501035_0001080
610 Ga0501045_0000534
611 nmdc:mga0k408_132036_c1
612 nmdc:mga05p37_142962_c1
613 nmdc:mga05p37_7122_c1
614 nmdc:mga09592_18777_c1
615 nmdc:mga09592_61_c1
616 nmdc:mga0qj67_8818_c1
617 nmdc:mga06r32_4078_c1
618 nmdc:mga06r32_5054_c1
619 nmdc:mga08y16_59204_c1
620 nmdc:mga0n895_13442_c1
621 nmdc:mga0a205_22871_c1
622 Ga0495619_0081196
623 Ga0500646_0000776
624 Ga0500593_000339
625 Ga0500593_000932
626 Ga0500655_002973
627 Ga0500604_0001972
628 Ga0500645_000422
629 Ga0501084_0012849
630 Ga0500661_000540
631 Ga0501082_0010612
632 Ga0530510_0000686
633 2601670227
634 2643799206
635 2644473461
636 2739057791
637 2809143172
638 2857552200
639 2885082921
640 2932413737
641 2932417797
642 8047679183

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

54

98

0.93

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

51

93

0.92

PF01266

DAO

FAD dependent oxidoreductase

51

452

0.9

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

52

109

0.86

PF00890

FAD_binding_2

FAD binding domain

51

326

0.78

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

22

96

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o1i-assembly1.cif.gz_A-2 structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-e141a mutant 0.987 2 31
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9779 2 33
4j0f-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9676 2 33
2vq3-assembly1.cif.gz_B crystal structure of the membrane proximal oxidoreductase domain of human steap3, the dominant ferric reductase of the erythroid transferrin cycle 0.9618 1 31
8jyt-assembly2.cif.gz_B ancestral imine reducatase n560 0.956 1 28
ID Description Score Start End Superfamily
af_Q2G1C9_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.994 2 29 3.40.50.720
af_A0A2R8RWQ2_2_283_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9902 2 32 3.50.50.60
1npxA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9898 2 34 3.50.50.60
af_P9WFZ3_1_135_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9896 1 33 3.40.50.720
1xdwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9859 2 30 3.40.50.720
ID Description Score Start End GO Terms
AF-V4YUZ3-F1-model_v4 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.9867 1 422 GO:0005737
GO:0005886
GO:0008718
GO:0055130
AF-A0A6N9SSC0-F1-model_v4 FAD-dependent oxidoreductase 0.9811 1 420 GO:0005737
GO:0005886
GO:0008718
GO:0055130
AF-A0A1Q3YNZ7-F1-model_v4 deleted 0.9782 1 423
AF-A0A839A0Z1-F1-model_v4 deleted 0.9765 1 423
AF-A0A6P1U7B7-F1-model_v4 FAD-dependent oxidoreductase 0.9759 1 418 GO:0005737
GO:0005886
GO:0008718
GO:0055130

Map