F406089

General Info

Members Datasets Scaffolds Average Seq Length
321 210 303 204

Family's Representative Sequence

Representative Sequence 3300042532|Ga0450893_0022212|Ga0450893_0022212_248_973
Length 241
Sequence MDTLGFMARVSFREQVLRAREDAIVSSVNRLLAQRGYEGMTVDAVAADVGIAKAVLYKHFSSKEALAAAAMVGVLERAEARLDELAAEPLGALERLKAVARWTMEVQLAGEMPALPAQNSSLRAALMADQGYVGKLMQVSDRLGEWITEAQAAGGIDPALPPELVLYTLYARACDPVLSVLKAGGGYSDERIIELLLATCFGGLQARGPAAAAGEKPAVSRKTRARSPGSPSPATKAGSGR

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
3 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
4 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
5 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
6 2643221660 Methylibium sp. Root1272 Isolate Unclassified
7 2738541277 Variovorax sp. GV051 Isolate Unclassified
8 2738541307 Variovorax sp. GV008 Isolate Unclassified
9 2738543019 Variovorax sp. GV040 Isolate Unclassified
10 2885198086 Variovorax sp. 679 Isolate Unclassified
11 2885211737 Variovorax sp. 553 Isolate Unclassified
12 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
13 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
14 2928070936 Variovorax gossypii 1167 Isolate Unclassified
15 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
16 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
17 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
18 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
19 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
20 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
21 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
22 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
23 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
24 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
30 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
31 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
106 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
107 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
113 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
114 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
115 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
116 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
117 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
118 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
119 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
120 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
142 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
145 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
146 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
147 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
148 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
149 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
153 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
173 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
174 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
175 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
178 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
181 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
182 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
183 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
186 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
187 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
188 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
189 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
190 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
191 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
192 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
193 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
194 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
195 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
196 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
197 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
198 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
199 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
200 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
203 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
204 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
205 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
206 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
207 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
208 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
209 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
210 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.39
Metatranscriptomes 0
Isolates 5.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.6
Nodule 0.62
Rhizoplane 6.23
Rhizosphere 41.12
Stem 0
Stem Tuber 0
Unclassified 22.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10022390 3300001979 Bacteria 2176
2 JGI25155J39150_1000073 3300002704 Bacteria 62972
3 JGI25156J39149_1000609 3300002705 Bacteria 19855
4 JGI25154J39366_1000118 3300002738 Bacteria 64203
5 JGI25154J39366_1000258 3300002738 Bacteria 33918
6 JGI25157J39369_1000001 3300002741 Bacteria 363277
7 JGI25151J46595_10001868 3300003187 Bacteria 13459
8 JGI25151J46595_10004616 3300003187 Bacteria 7249
9 JGI25151J46595_10119263 3300003187 Bacteria 675
10 Ga0055526_1007314 3300003771 Bacteria 5770
11 Ga0055524_1000046 3300003775 Bacteria 150909
12 Ga0055536_1012004 3300003781 Bacteria 3258
13 Ga0055530_10003387 3300003791 Bacteria 9105
14 Ga0055530_10033616 3300003791 Bacteria 1320
15 Ga0055540_1000007 3300003792 Bacteria 318178
16 Ga0055531_10007935 3300003794 Bacteria 5693
17 Ga0065165_1042205 3300005262 Bacteria 1348
18 Ga0070671_100007656 3300005355 Bacteria 8635
19 Ga0070674_100076003 3300005356 Bacteria 2387
20 Ga0070673_100215943 3300005364 Bacteria 1658
21 Ga0070667_100178239 3300005367 Bacteria 1879
22 Ga0070663_101079060 3300005455 Bacteria 701
23 Ga0070678_100131176 3300005456 Bacteria 1991
24 Ga0068853_100016638 3300005539 Bacteria 6055
25 Ga0070665_100010388 3300005548 Bacteria 9421
26 Ga0070665_100023002 3300005548 Bacteria 6275
27 Ga0068855_100018189 3300005563 Bacteria 8443
28 Ga0068855_100032425 3300005563 Bacteria 6238
29 Ga0068854_100418338 3300005578 Bacteria 1113
30 Ga0068852_100163370 3300005616 Bacteria 2081
31 Ga0068864_100024461 3300005618 Bacteria 5082
32 Ga0075363_100008569 3300006048 Bacteria 4769
33 Ga0075363_100024397 3300006048 Bacteria 3074
34 Ga0075364_10281264 3300006051 Bacteria 1132
35 Ga0075367_10254787 3300006178 Bacteria 1101
36 Ga0075366_10001765 3300006195 Bacteria 10903
37 Ga0075366_10005718 3300006195 Bacteria 6750
38 Ga0075366_10020343 3300006195 Bacteria 3850
39 Ga0075370_10017276 3300006353 Bacteria 3897
40 Ga0075370_10198384 3300006353 Bacteria 1183
41 Ga0075370_10335891 3300006353 Bacteria 901
42 Ga0068871_100301726 3300006358 Bacteria 1406
43 Ga0079104_1000009 3300006946 Bacteria 367015
44 Ga0105240_10233711 3300009093 Bacteria 2135
45 Ga0105240_10547778 3300009093 Bacteria 1280
46 Ga0105245_10726113 3300009098 Bacteria 1028
47 Ga0105247_10067567 3300009101 Bacteria 2227
48 Ga0105248_10007868 3300009177 Bacteria 11707
49 Ga0105248_10121748 3300009177 Bacteria 2943
50 Ga0105237_10026697 3300009545 Bacteria 5902
51 Ga0105237_10046180 3300009545 Bacteria 4382
52 Ga0105239_10138124 3300010375 Bacteria 2714
53 Ga0105239_10577363 3300010375 Bacteria 1281
54 Ga0105246_10026469 3300011119 Bacteria 3790
55 Ga0157373_10023813 3300013100 Bacteria 4437
56 Ga0157370_10006744 3300013104 Bacteria 12592
57 Ga0157369_10011362 3300013105 Bacteria 10113
58 Ga0157378_10129101 3300013297 Bacteria 2338
59 Ga0157378_10743625 3300013297 Bacteria 1003
60 Ga0182008_10005775 3300014497 Bacteria 7003
61 Ga0157379_10001445 3300014968 Bacteria 19513
62 Ga0163161_10004831 3300017792 Bacteria 9387
63 Ga0163161_10066569 3300017792 Bacteria 2631
64 Ga0209435_100001 3300025206 Bacteria 1424171
65 Ga0209646_1000001 3300025246 Bacteria 3092932
66 Ga0209026_1000001 3300025250 Bacteria 1228671
67 Ga0209677_117464 3300025253 Bacteria 893
68 Ga0209759_1000001 3300025256 Bacteria 2799452
69 Ga0209129_1006240 3300025258 Bacteria 3932
70 Ga0209675_1011478 3300025291 Bacteria 2934
71 Ga0209675_1023804 3300025291 Bacteria 1577
72 Ga0209676_1001275 3300025292 Bacteria 26098
73 Ga0209025_1000294 3300025294 Bacteria 111598
74 Ga0209025_1005038 3300025294 Bacteria 11027
75 Ga0209025_1022436 3300025294 Bacteria 3347
76 Ga0209025_1023318 3300025294 Bacteria 3239
77 Ga0209564_1001181 3300025295 Bacteria 30229
78 Ga0209564_1001930 3300025295 Bacteria 18511
79 Ga0209758_1031713 3300025297 Bacteria 2162
80 Ga0209050_1000246 3300025298 Bacteria 116721
81 Ga0209050_1014309 3300025298 Bacteria 3430
82 Ga0209050_1019381 3300025298 Bacteria 2585
83 Ga0209050_1023914 3300025298 Bacteria 2132
84 Ga0209256_1000019 3300025299 Bacteria 558627
85 Ga0209256_1022539 3300025299 Bacteria 1904
86 Ga0207426_1018687 3300025302 Bacteria 2438
87 Ga0209051_1000004 3300025303 Bacteria 1155596
88 Ga0209257_1000038 3300025304 Bacteria 609032
89 Ga0209257_1000044 3300025304 Bacteria 486709
90 Ga0209257_1003358 3300025304 Bacteria 13842
91 Ga0207695_10217195 3300025913 Bacteria 1820
92 Ga0207644_10035986 3300025931 Bacteria 3473
93 Ga0207669_10428715 3300025937 Bacteria 1043
94 Ga0207711_10296279 3300025941 Bacteria 1491
95 Ga0207711_10370460 3300025941 Unclassified 1328
96 Ga0207667_10023111 3300025949 Bacteria 6849
97 Ga0207667_10144190 3300025949 Bacteria 2452
98 Ga0207658_10160686 3300025986 Bacteria 1841
99 Ga0207639_10130329 3300026041 Bacteria 2081
100 Ga0207639_10634862 3300026041 Bacteria 987
101 Ga0207639_10741978 3300026041 Bacteria 913
102 Ga0207683_10039187 3300026121 Bacteria 4133
103 Ga0209281_1000023 3300027111 Bacteria 519955
104 Ga0268266_10011238 3300028379 Bacteria 7792
105 Ga0268266_10035699 3300028379 Bacteria 4228
106 Ga0307517_10108693 3300028786 Bacteria 2127
107 Ga0307517_10335994 3300028786 Bacteria 828
108 Ga0307515_10000013 3300028794 Bacteria 568456
109 Ga0307515_10000037 3300028794 Bacteria 331970
110 Ga0307515_10000219 3300028794 Bacteria 141532
111 Ga0307515_10000374 3300028794 Bacteria 109304
112 Ga0307515_10003154 3300028794 Bacteria 34882
113 Ga0307515_10119346 3300028794 Bacteria 3001
114 Ga0307515_10127657 3300028794 Bacteria 2827
115 Ga0307515_10488298 3300028794 Bacteria 843
116 Ga0307512_10060832 3300030522 Bacteria 2915
117 Ga0307512_10094176 3300030522 Bacteria 2068
118 Ga0307512_10094373 3300030522 Bacteria 2065
119 Ga0265328_10004159 3300031239 Bacteria 6311
120 Ga0265327_10000174 3300031251 Bacteria 138922
121 Ga0307513_10004807 3300031456 Bacteria 17947
122 Ga0307513_10013504 3300031456 Bacteria 10022
123 Ga0307509_10003945 3300031507 Bacteria 21884
124 Ga0307509_10034063 3300031507 Bacteria 5599
125 Ga0307509_10393075 3300031507 Bacteria 1096
126 Ga0307508_10201095 3300031616 Bacteria 1593
127 Ga0307514_10001231 3300031649 Bacteria 33814
128 Ga0307514_10001315 3300031649 Bacteria 31822
129 Ga0307514_10011100 3300031649 Bacteria 7503
130 Ga0307516_10000723 3300031730 Bacteria 45058
131 Ga0307516_10019586 3300031730 Bacteria 7006
132 Ga0307518_10185993 3300031838 Bacteria 1398
133 Ga0307410_11116804 3300031852 Bacteria 684
134 Ga0307412_10009695 3300031911 Bacteria 5529
135 Ga0307412_10070719 3300031911 Bacteria 2380
136 Ga0307416_100004118 3300032002 Bacteria 8707
137 Ga0307510_10000779 3300033180 Bacteria 32991
138 Ga0307510_10016176 3300033180 Bacteria 8810
139 Ga0307510_10019461 3300033180 Bacteria 7965
140 Ga0307510_10076221 3300033180 Bacteria 3300
141 Ga0373949_0057999 3300035090 Bacteria 990
142 Ga0373932_0039939 3300035112 Bacteria 1348
143 Ga0373943_0071880 3300035170 Bacteria 1754
144 Ga0373962_0097917 3300035242 Bacteria 912
145 Ga0373925_0172902 3300037068 Bacteria 1706
146 Ga0395905_0000308 3300037471 Bacteria 71152
147 Ga0395905_0140881 3300037471 Bacteria 2268
148 Ga0451791_0043916 3300041451 Bacteria 1252
149 Ga0451791_0961966 3300041451 Bacteria 947
150 Ga0451797_1479067 3300041453 Bacteria 1254
151 Ga0451804_0047533 3300041463 Bacteria 818
152 Ga0451807_1280374 3300041486 Bacteria 973
153 Ga0451841_1315363 3300041498 Bacteria 1058
154 Ga0451853_0522095 3300041512 Bacteria 2634
155 Ga0439431_0021897 3300041997 Bacteria 1537
156 Ga0450899_020674 3300042135 Unclassified 768
157 Ga0450893_0022212 3300042532 Bacteria 1099
158 Ga0451577_0006736 3300042876 Bacteria 11399
159 Ga0451577_0009535 3300042876 Bacteria 9340
160 Ga0451577_0030724 3300042876 Bacteria 4851
161 Ga0451577_0044151 3300042876 Bacteria 3991
162 Ga0451577_0047210 3300042876 Bacteria 3851
163 Ga0466969_0055960 3300044656 Bacteria 1927
164 Ga0453683_0165029 3300044673 Bacteria 1402
165 Ga0453683_0499695 3300044673 Bacteria 789
166 Ga0466965_0012184 3300044683 Bacteria 4041
167 Ga0466961_0154736 3300044693 Bacteria 1430
168 Ga0466963_0211866 3300044694 Bacteria 1356
169 Ga0453684_0081577 3300044712 Bacteria 4033
170 Ga0453684_0121781 3300044712 Bacteria 3148
171 Ga0453684_0182616 3300044712 Bacteria 2461
172 Ga0453684_0206595 3300044712 Bacteria 2285
173 Ga0453684_0217184 3300044712 Bacteria 2218
174 Ga0466960_0082899 3300044901 Bacteria 1619
175 Ga0466959_0127028 3300045049 Bacteria 1809
176 Ga0451576_0008860 3300045051 Bacteria 11749
177 Ga0451576_0063098 3300045051 Bacteria 3862
178 Ga0451576_0283880 3300045051 Bacteria 1731
179 Ga0451576_0327895 3300045051 Bacteria 1602
180 Ga0451576_1361583 3300045051 Bacteria 739
181 Ga0466958_0039281 3300045836 Bacteria 2843
182 Ga0495627_004465 3300046453 Bacteria 5852
183 Ga0495627_012162 3300046453 Bacteria 3064
184 Ga0495592_0000477 3300046454 Bacteria 29375
185 Ga0495629_0641313 3300046459 Bacteria 708
186 Ga0495638_0128220 3300046460 Bacteria 1493
187 Ga0495606_0039406 3300046507 Bacteria 3185
188 Ga0495610_0043642 3300046512 Bacteria 2232
189 Ga0495616_0002296 3300046513 Bacteria 12792
190 Ga0495620_0007322 3300046515 Bacteria 6005
191 Ga0495620_0066255 3300046515 Bacteria 1488
192 Ga0495631_0000334 3300046518 Bacteria 32359
193 Ga0495632_0181549 3300046519 Bacteria 964
194 Ga0495637_0001832 3300046520 Bacteria 12166
195 Ga0495637_0072576 3300046520 Bacteria 1386
196 Ga0495643_0093537 3300046522 Bacteria 1548
197 Ga0495648_0104565 3300046524 Bacteria 1555
198 Ga0495654_0161478 3300046530 Bacteria 983
199 Ga0495622_0011744 3300046557 Bacteria 4050
200 Ga0495622_0047762 3300046557 Bacteria 1989
201 Ga0495656_0021724 3300046615 Bacteria 2502
202 Ga0495656_0066738 3300046615 Bacteria 1586
203 Ga0495625_0162501 3300046660 Bacteria 1495
204 Ga0495588_0025115 3300046674 Bacteria 2966
205 Ga0495658_0410657 3300046683 Bacteria 863
206 Ga0495624_0092878 3300046690 Bacteria 1861
207 Ga0495670_0048351 3300046691 Bacteria 2128
208 Ga0495670_0087580 3300046691 Bacteria 1591
209 Ga0495671_0008007 3300046692 Bacteria 5973
210 Ga0495671_0071879 3300046692 Bacteria 1699
211 Ga0495676_0024267 3300047321 Bacteria 5254
212 Ga0495676_0037161 3300047321 Bacteria 4057
213 Ga0495686_0301624 3300047472 Bacteria 884
214 Ga0495593_0056532 3300047673 Bacteria 2062
215 Ga0496102_0056223 3300048905 Bacteria 3589
216 Ga0496108_0224574 3300048911 Bacteria 1632
217 Ga0496109_0008367 3300048912 Bacteria 8791
218 Ga0496109_0083454 3300048912 Bacteria 2947
219 Ga0496109_1060259 3300048912 Bacteria 748
220 Ga0496110_0022639 3300048913 Bacteria 5338
221 Ga0496110_0042982 3300048913 Bacteria 3945
222 Ga0496112_0077583 3300048915 Bacteria 3285
223 Ga0496113_0349860 3300048916 Bacteria 1185
224 Ga0496114_0002065 3300048917 Bacteria 15294
225 Ga0496114_0155545 3300048917 Bacteria 1985
226 Ga0496114_0503720 3300048917 Bacteria 1071
227 Ga0496116_0239190 3300048919 Bacteria 913
228 Ga0496117_0195301 3300048920 Bacteria 1148
229 Ga0496117_0224622 3300048920 Bacteria 1042
230 Ga0496118_0019788 3300048921 Bacteria 6003
231 Ga0496118_0142672 3300048921 Bacteria 1515
232 Ga0496118_0368193 3300048921 Bacteria 759
233 Ga0496121_0032009 3300048924 Bacteria 4791
234 Ga0496121_0111597 3300048924 Bacteria 2084
235 Ga0496121_0173489 3300048924 Bacteria 1563
236 Ga0496122_0065856 3300048925 Bacteria 2623
237 Ga0496122_0080498 3300048925 Bacteria 2271
238 Ga0496122_0136576 3300048925 Bacteria 1544
239 Ga0496123_0013667 3300048926 Bacteria 6790
240 Ga0496123_0055552 3300048926 Bacteria 2596
241 Ga0496123_0075431 3300048926 Bacteria 2081
242 Ga0496124_0056130 3300048927 Bacteria 3323
243 Ga0496124_0170842 3300048927 Bacteria 1684
244 Ga0496124_0319856 3300048927 Bacteria 1111
245 Ga0496124_0526460 3300048927 Bacteria 786
246 Ga0496125_0040149 3300048928 Bacteria 4017
247 Ga0496125_0111554 3300048928 Bacteria 1978
248 Ga0496125_0195612 3300048928 Bacteria 1330
249 Ga0501222_009656 3300049662 Bacteria 1276
250 Ga0501252_003911 3300049682 Bacteria 1564
251 Ga0501259_070428 3300049688 Bacteria 749
252 nmdc:mga03683_188662_c1 3300050489 Bacteria 943
253 nmdc:mga00v17_405786_c1 3300050491 Bacteria 885
254 nmdc:mga0k408_160520_c2 3300050493 Bacteria 953
255 nmdc:mga0k408_2440_c1 3300050493 Bacteria 9879
256 nmdc:mga0k408_8024_c1 3300050493 Bacteria 5660
257 nmdc:mga06z11_100465_c1 3300050494 Bacteria 1586
258 nmdc:mga07m45_128263_c1 3300050496 Bacteria 1467
259 nmdc:mga07m45_235976_c1 3300050496 Bacteria 1064
260 nmdc:mga07m45_2920_c1 3300050496 Bacteria 8107
261 nmdc:mga07m45_424437_c1 3300050496 Bacteria 771
262 nmdc:mga07m45_85998_c1 3300050496 Bacteria 1116
263 nmdc:mga0sz30_86673_c1 3300050516 Bacteria 1359
264 Ga0500610_0013259 3300053079 Bacteria 3829
265 Ga0500610_0028999 3300053079 Bacteria 2792
266 Ga0500643_011157 3300053087 Bacteria 3296
267 Ga0500644_0023858 3300053088 Bacteria 1863
268 Ga0500651_0000064 3300053093 Bacteria 70497
269 Ga0500651_0012926 3300053093 Bacteria 5072
270 Ga0500651_0081592 3300053093 Bacteria 2002
271 Ga0500566_0057174 3300053094 Bacteria 2216
272 Ga0500566_0353160 3300053094 Bacteria 673
273 Ga0500641_0049368 3300053096 Bacteria 1726
274 Ga0500555_043064 3300053103 Bacteria 1252
275 Ga0500569_013294 3300053109 Bacteria 2012
276 Ga0500571_001190 3300053110 Bacteria 11864
277 Ga0500593_000439 3300053117 Bacteria 16369
278 Ga0500594_0001105 3300053118 Bacteria 5784
279 Ga0500594_0001586 3300053118 Bacteria 4953
280 Ga0500597_026326 3300053120 Bacteria 2353
281 Ga0500607_001602 3300053121 Bacteria 20006
282 Ga0500607_052488 3300053121 Bacteria 2164
283 Ga0500618_060325 3300053125 Bacteria 853
284 Ga0500559_0000020 3300053136 Bacteria 134858
285 Ga0500559_0004902 3300053136 Bacteria 6238
286 Ga0500564_000623 3300053138 Bacteria 10798
287 Ga0500564_020225 3300053138 Bacteria 3045
288 Ga0500568_0011564 3300053139 Bacteria 4085
289 Ga0500568_0023395 3300053139 Bacteria 2628
290 Ga0500574_035208 3300053141 Bacteria 1370
291 Ga0500604_0044627 3300053151 Bacteria 1351
292 Ga0500619_000146 3300053154 Bacteria 17284
293 Ga0500622_0103299 3300053156 Bacteria 1400
294 Ga0500634_0009517 3300053161 Bacteria 4922
295 Ga0500634_0045870 3300053161 Bacteria 2363
296 Ga0500636_0219825 3300053177 Bacteria 991
297 Ga0500570_078943 3300053724 Bacteria 1493
298 Ga0500645_003999 3300053730 Bacteria 5801
299 Ga0500565_002092 3300053734 Bacteria 1449
300 Ga0500596_036805 3300053735 Bacteria 772
301 Ga0500661_003833 3300055283 Bacteria 2825
302 Ga0590071_001665 3300059421 Bacteria 5795
303 Ga0466962_0020486 3300061719 Bacteria 3177

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053093 Ga0500651_0081592 Ga0500651_0081592_1350_1931 175
2 3300046454 Ga0495592_0000477 Ga0495592_0000477_4225_4809 176
3 3300053138 Ga0500564_020225 Ga0500564_020225_1271_1855 176
4 3300044656 Ga0466969_0055960 Ga0466969_0055960_883_1557 183
5 3300044683 Ga0466965_0012184 Ga0466965_0012184_2246_2920 183
6 3300044693 Ga0466961_0154736 Ga0466961_0154736_162_836 183
7 3300044694 Ga0466963_0211866 Ga0466963_0211866_129_803 183
8 3300045049 Ga0466959_0127028 Ga0466959_0127028_255_929 183
9 3300045836 Ga0466958_0039281 Ga0466958_0039281_1773_2447 183
10 3300061719 Ga0466962_0020486 Ga0466962_0020486_2050_2724 183
11 3300031507 Ga0307509_10003945 Ga0307509_1000394521 184
12 3300033180 Ga0307510_10016176 Ga0307510_100161764 184
13 3300044901 Ga0466960_0082899 Ga0466960_0082899_182_832 184
14 3300046519 Ga0495632_0181549 Ga0495632_0181549_298_906 184
15 3300053093 Ga0500651_0012926 Ga0500651_0012926_100_708 184
16 3300053118 Ga0500594_0001586 Ga0500594_0001586_4163_4771 184
17 3300053125 Ga0500618_060325 Ga0500618_060325_193_801 184
18 3300053136 Ga0500559_0000020 Ga0500559_0000020_46934_47542 184
19 3300053139 Ga0500568_0023395 Ga0500568_0023395_113_721 184
20 3300053156 Ga0500622_0103299 Ga0500622_0103299_692_1300 184
21 3300030522 Ga0307512_10060832 Ga0307512_100608324 185
22 3300031649 Ga0307514_10011100 Ga0307514_100111007 185
23 3300031838 Ga0307518_10185993 Ga0307518_101859932 185
24 3300033180 Ga0307510_10000779 Ga0307510_1000077923 185
25 3300042135 Ga0450899_020674 Ga0450899_020674_23_604 189
26 3300005367 Ga0070667_100178239 Ga0070667_1001782392 190
27 3300003187 JGI25151J46595_10119263 JGI25151J46595_101192631 191
28 3300003771 Ga0055526_1007314 Ga0055526_10073141 191
29 3300005356 Ga0070674_100076003 Ga0070674_1000760033 191
30 3300005364 Ga0070673_100215943 Ga0070673_1002159432 191
31 3300005456 Ga0070678_100131176 Ga0070678_1001311762 191
32 3300025302 Ga0207426_1018687 Ga0207426_10186872 191
33 3300026041 Ga0207639_10130329 Ga0207639_101303292 191
34 3300041451 Ga0451791_0961966 Ga0451791_0961966_39_614 191
35 3300048912 Ga0496109_0083454 Ga0496109_0083454_21_617 191
36 3300048927 Ga0496124_0526460 Ga0496124_0526460_14_589 191
37 3300053094 Ga0500566_0353160 Ga0500566_0353160_83_658 191
38 3300055283 Ga0500661_003833 Ga0500661_003833_1860_2435 191
39 3300031911 Ga0307412_10070719 Ga0307412_100707191 192
40 iso_pu_bacteria 2643221660 2644339390 196
41 3300037471 Ga0395905_0000308 Ga0395905_0000308_66505_67107 198
42 3300009545 Ga0105237_10046180 Ga0105237_100461803 199
43 3300025986 Ga0207658_10160686 Ga0207658_101606862 199
44 3300028794 Ga0307515_10000037 Ga0307515_1000003755 199
45 3300031239 Ga0265328_10004159 Ga0265328_100041592 199
46 3300031251 Ga0265327_10000174 Ga0265327_1000017423 199
47 3300031507 Ga0307509_10034063 Ga0307509_100340635 199
48 3300031616 Ga0307508_10201095 Ga0307508_102010952 199
49 3300031649 Ga0307514_10001231 Ga0307514_1000123116 199
50 3300033180 Ga0307510_10019461 Ga0307510_100194614 199
51 3300035090 Ga0373949_0057999 Ga0373949_0057999_122_730 199
52 3300035112 Ga0373932_0039939 Ga0373932_0039939_580_1188 199
53 3300035170 Ga0373943_0071880 Ga0373943_0071880_290_898 199
54 3300035242 Ga0373962_0097917 Ga0373962_0097917_101_709 199
55 3300037068 Ga0373925_0172902 Ga0373925_0172902_153_761 199
56 3300045051 Ga0451576_0283880 Ga0451576_0283880_568_1173 199
57 3300046459 Ga0495629_0641313 Ga0495629_0641313_42_650 199
58 3300046557 Ga0495622_0047762 Ga0495622_0047762_87_695 199
59 3300046615 Ga0495656_0066738 Ga0495656_0066738_94_702 199
60 3300046683 Ga0495658_0410657 Ga0495658_0410657_47_655 199
61 3300046690 Ga0495624_0092878 Ga0495624_0092878_540_1148 199
62 3300046692 Ga0495671_0071879 Ga0495671_0071879_200_799 199
63 3300047321 Ga0495676_0037161 Ga0495676_0037161_1313_1921 199
64 3300047673 Ga0495593_0056532 Ga0495593_0056532_847_1455 199
65 3300048917 Ga0496114_0503720 Ga0496114_0503720_284_892 199
66 3300050516 nmdc:mga0sz30_86673_c1 nmdc:mga0sz30_86673_c1_574_1182 199
67 3300053088 Ga0500644_0023858 Ga0500644_0023858_832_1431 199
68 3300053177 Ga0500636_0219825 Ga0500636_0219825_146_754 199
69 3300003775 Ga0055524_1000046 Ga0055524_100004660 200
70 3300003791 Ga0055530_10003387 Ga0055530_1000338712 200
71 3300003791 Ga0055530_10033616 Ga0055530_100336161 200
72 3300003792 Ga0055540_1000007 Ga0055540_1000007259 200
73 3300003794 Ga0055531_10007935 Ga0055531_100079357 200
74 3300005355 Ga0070671_100007656 Ga0070671_1000076562 200
75 3300005548 Ga0070665_100023002 Ga0070665_1000230025 200
76 3300005563 Ga0068855_100018189 Ga0068855_1000181893 200
77 3300005618 Ga0068864_100024461 Ga0068864_1000244614 200
78 3300006048 Ga0075363_100024397 Ga0075363_1000243974 200
79 3300006195 Ga0075366_10020343 Ga0075366_100203432 200
80 3300006946 Ga0079104_1000009 Ga0079104_100000943 200
81 3300009098 Ga0105245_10726113 Ga0105245_107261132 200
82 3300009101 Ga0105247_10067567 Ga0105247_100675673 200
83 3300009177 Ga0105248_10007868 Ga0105248_100078689 200
84 3300009177 Ga0105248_10121748 Ga0105248_101217483 200
85 3300013297 Ga0157378_10129101 Ga0157378_101291013 200
86 3300014968 Ga0157379_10001445 Ga0157379_1000144510 200
87 3300025298 Ga0209050_1000246 Ga0209050_100024643 200
88 3300025298 Ga0209050_1014309 Ga0209050_10143094 200
89 3300025299 Ga0209256_1000019 Ga0209256_100001989 200
90 3300025303 Ga0209051_1000004 Ga0209051_1000004313 200
91 3300025304 Ga0209257_1000038 Ga0209257_1000038447 200
92 3300025304 Ga0209257_1000044 Ga0209257_1000044112 200
93 3300025931 Ga0207644_10035986 Ga0207644_100359862 200
94 3300025941 Ga0207711_10296279 Ga0207711_102962792 200
95 3300025941 Ga0207711_10370460 Ga0207711_103704602 200
96 3300025949 Ga0207667_10144190 Ga0207667_101441901 200
97 3300027111 Ga0209281_1000023 Ga0209281_1000023344 200
98 3300028379 Ga0268266_10035699 Ga0268266_100356993 200
99 3300028786 Ga0307517_10108693 Ga0307517_101086933 200
100 3300028786 Ga0307517_10335994 Ga0307517_103359941 200
101 3300028794 Ga0307515_10000013 Ga0307515_10000013267 200
102 3300028794 Ga0307515_10000374 Ga0307515_1000037490 200
103 3300028794 Ga0307515_10119346 Ga0307515_101193463 200
104 3300028794 Ga0307515_10127657 Ga0307515_101276572 200
105 3300030522 Ga0307512_10094373 Ga0307512_100943732 200
106 3300031456 Ga0307513_10004807 Ga0307513_1000480719 200
107 3300031507 Ga0307509_10393075 Ga0307509_103930752 200
108 3300031730 Ga0307516_10000723 Ga0307516_1000072343 200
109 3300031730 Ga0307516_10019586 Ga0307516_100195869 200
110 3300031852 Ga0307410_11116804 Ga0307410_111168041 200
111 3300041451 Ga0451791_0043916 Ga0451791_0043916_29_631 200
112 3300041486 Ga0451807_1280374 Ga0451807_1280374_168_770 200
113 3300042876 Ga0451577_0006736 Ga0451577_0006736_2267_2875 200
114 3300042876 Ga0451577_0009535 Ga0451577_0009535_2995_3651 200
115 3300042876 Ga0451577_0030724 Ga0451577_0030724_3244_3852 200
116 3300042876 Ga0451577_0044151 Ga0451577_0044151_2260_2874 200
117 3300042876 Ga0451577_0047210 Ga0451577_0047210_1644_2255 200
118 3300044673 Ga0453683_0165029 Ga0453683_0165029_226_834 200
119 3300044673 Ga0453683_0499695 Ga0453683_0499695_142_747 200
120 3300044712 Ga0453684_0081577 Ga0453684_0081577_372_980 200
121 3300044712 Ga0453684_0121781 Ga0453684_0121781_1454_2059 200
122 3300044712 Ga0453684_0217184 Ga0453684_0217184_531_1145 200
123 3300045051 Ga0451576_0008860 Ga0451576_0008860_9259_9864 200
124 3300045051 Ga0451576_0063098 Ga0451576_0063098_945_1556 200
125 3300045051 Ga0451576_0327895 Ga0451576_0327895_533_1144 200
126 3300045051 Ga0451576_1361583 Ga0451576_1361583_70_678 200
127 3300046524 Ga0495648_0104565 Ga0495648_0104565_211_828 200
128 3300047472 Ga0495686_0301624 Ga0495686_0301624_43_690 200
129 3300048905 Ga0496102_0056223 Ga0496102_0056223_2271_2912 200
130 3300048911 Ga0496108_0224574 Ga0496108_0224574_649_1272 200
131 3300048913 Ga0496110_0042982 Ga0496110_0042982_1214_1837 200
132 3300048915 Ga0496112_0077583 Ga0496112_0077583_1808_2431 200
133 3300048916 Ga0496113_0349860 Ga0496113_0349860_51_674 200
134 3300048917 Ga0496114_0002065 Ga0496114_0002065_8430_9041 200
135 3300049662 Ga0501222_009656 Ga0501222_009656_387_1094 200
136 3300049682 Ga0501252_003911 Ga0501252_003911_848_1459 200
137 3300049688 Ga0501259_070428 Ga0501259_070428_118_729 200
138 3300050493 nmdc:mga0k408_160520_c2 nmdc:mga0k408_160520_c2_257_862 200
139 3300050496 nmdc:mga07m45_128263_c1 nmdc:mga07m45_128263_c1_771_1436 200
140 3300053154 Ga0500619_000146 Ga0500619_000146_3599_4219 200
141 3300053724 Ga0500570_078943 Ga0500570_078943_270_896 200
142 3300059421 Ga0590071_001665 Ga0590071_001665_956_1588 200
143 iso_pu_bacteria 2904541872 2904543149 200
144 iso_pu_bacteria 2929160207 2929160383 200
145 3300037471 Ga0395905_0140881 Ga0395905_0140881_430_1038 201
146 3300041997 Ga0439431_0021897 Ga0439431_0021897_286_906 201
147 3300044712 Ga0453684_0182616 Ga0453684_0182616_668_1279 201
148 3300048912 Ga0496109_0008367 Ga0496109_0008367_5438_6052 201
149 3300048912 Ga0496109_1060259 Ga0496109_1060259_36_659 201
150 3300048913 Ga0496110_0022639 Ga0496110_0022639_1681_2295 201
151 iso_pu_bacteria 2511231002 2511242826 201
152 iso_pu_bacteria 2599185214 2599621316 201
153 iso_pu_bacteria 2599185226 2599671000 201
154 iso_pu_bacteria 2599185227 2599679490 201
155 iso_pu_bacteria 2599185229 2599690827 201
156 iso_pu_bacteria 2738541277 2738722824 201
157 iso_pu_bacteria 2738541307 2738883740 201
158 iso_pu_bacteria 2738543019 2739283395 201
159 iso_pu_bacteria 2885198086 2885200231 201
160 iso_pu_bacteria 2885211737 2885213883 201
161 iso_pu_bacteria 2928070936 2928071975 201
162 iso_pu_bacteria 2928084124 2928085217 201
163 3300046615 Ga0495656_0021724 Ga0495656_0021724_289_900 202
164 iso_pu_bacteria 2919704043 2919708179 203
165 iso_pu_bacteria 2945909444 2945915407 203
166 iso_pu_bacteria 2945984333 2945989191 203
167 3300003187 JGI25151J46595_10001868 JGI25151J46595_1000186813 204
168 3300003187 JGI25151J46595_10004616 JGI25151J46595_100046164 204
169 3300003781 Ga0055536_1012004 Ga0055536_10120042 204
170 3300005262 Ga0065165_1042205 Ga0065165_10422051 204
171 3300005455 Ga0070663_101079060 Ga0070663_1010790601 204
172 3300009093 Ga0105240_10547778 Ga0105240_105477782 204
173 3300025258 Ga0209129_1006240 Ga0209129_10062403 204
174 3300025291 Ga0209675_1011478 Ga0209675_10114781 204
175 3300025292 Ga0209676_1001275 Ga0209676_10012756 204
176 3300025294 Ga0209025_1000294 Ga0209025_100029437 204
177 3300025294 Ga0209025_1005038 Ga0209025_10050383 204
178 3300025294 Ga0209025_1022436 Ga0209025_10224362 204
179 3300025295 Ga0209564_1001181 Ga0209564_10011816 204
180 3300025295 Ga0209564_1001930 Ga0209564_10019306 204
181 3300025298 Ga0209050_1023914 Ga0209050_10239143 204
182 3300025299 Ga0209256_1022539 Ga0209256_10225391 204
183 3300025304 Ga0209257_1003358 Ga0209257_10033589 204
184 3300025913 Ga0207695_10217195 Ga0207695_102171952 204
185 3300041512 Ga0451853_0522095 Ga0451853_0522095_935_1552 204
186 3300048921 Ga0496118_0019788 Ga0496118_0019788_4620_5234 204
187 3300048928 Ga0496125_0111554 Ga0496125_0111554_552_1166 204
188 3300001979 JGI24740J21852_10022390 JGI24740J21852_100223902 205
189 3300002704 JGI25155J39150_1000073 JGI25155J39150_100007316 205
190 3300002705 JGI25156J39149_1000609 JGI25156J39149_100060916 205
191 3300002738 JGI25154J39366_1000118 JGI25154J39366_100011846 205
192 3300002738 JGI25154J39366_1000258 JGI25154J39366_100025816 205
193 3300002741 JGI25157J39369_1000001 JGI25157J39369_100000116 205
194 3300005539 Ga0068853_100016638 Ga0068853_1000166387 205
195 3300005548 Ga0070665_100010388 Ga0070665_1000103886 205
196 3300005563 Ga0068855_100032425 Ga0068855_1000324252 205
197 3300005578 Ga0068854_100418338 Ga0068854_1004183382 205
198 3300005616 Ga0068852_100163370 Ga0068852_1001633702 205
199 3300006048 Ga0075363_100008569 Ga0075363_1000085692 205
200 3300006051 Ga0075364_10281264 Ga0075364_102812642 205
201 3300006178 Ga0075367_10254787 Ga0075367_102547871 205
202 3300006195 Ga0075366_10001765 Ga0075366_100017656 205
203 3300006195 Ga0075366_10005718 Ga0075366_100057187 205
204 3300006353 Ga0075370_10017276 Ga0075370_100172765 205
205 3300006353 Ga0075370_10198384 Ga0075370_101983842 205
206 3300006353 Ga0075370_10335891 Ga0075370_103358912 205
207 3300006358 Ga0068871_100301726 Ga0068871_1003017261 205
208 3300009093 Ga0105240_10233711 Ga0105240_102337112 205
209 3300009545 Ga0105237_10026697 Ga0105237_100266972 205
210 3300010375 Ga0105239_10138124 Ga0105239_101381242 205
211 3300010375 Ga0105239_10577363 Ga0105239_105773631 205
212 3300011119 Ga0105246_10026469 Ga0105246_100264693 205
213 3300013100 Ga0157373_10023813 Ga0157373_100238132 205
214 3300013104 Ga0157370_10006744 Ga0157370_1000674410 205
215 3300013105 Ga0157369_10011362 Ga0157369_100113626 205
216 3300013297 Ga0157378_10743625 Ga0157378_107436252 205
217 3300014497 Ga0182008_10005775 Ga0182008_100057753 205
218 3300017792 Ga0163161_10004831 Ga0163161_100048315 205
219 3300017792 Ga0163161_10066569 Ga0163161_100665692 205
220 3300025206 Ga0209435_100001 Ga0209435_1000011297 205
221 3300025246 Ga0209646_1000001 Ga0209646_10000011666 205
222 3300025250 Ga0209026_1000001 Ga0209026_1000001320 205
223 3300025253 Ga0209677_117464 Ga0209677_1174642 205
224 3300025256 Ga0209759_1000001 Ga0209759_10000011297 205
225 3300025291 Ga0209675_1023804 Ga0209675_10238042 205
226 3300025294 Ga0209025_1023318 Ga0209025_10233183 205
227 3300025297 Ga0209758_1031713 Ga0209758_10317132 205
228 3300025298 Ga0209050_1019381 Ga0209050_10193812 205
229 3300025937 Ga0207669_10428715 Ga0207669_104287151 205
230 3300025949 Ga0207667_10023111 Ga0207667_100231112 205
231 3300026041 Ga0207639_10634862 Ga0207639_106348621 205
232 3300026041 Ga0207639_10741978 Ga0207639_107419782 205
233 3300026121 Ga0207683_10039187 Ga0207683_100391872 205
234 3300028379 Ga0268266_10011238 Ga0268266_100112388 205
235 3300028794 Ga0307515_10000219 Ga0307515_1000021953 205
236 3300028794 Ga0307515_10003154 Ga0307515_1000315412 205
237 3300028794 Ga0307515_10488298 Ga0307515_104882981 205
238 3300030522 Ga0307512_10094176 Ga0307512_100941762 205
239 3300031456 Ga0307513_10013504 Ga0307513_100135043 205
240 3300031649 Ga0307514_10001315 Ga0307514_1000131527 205
241 3300031911 Ga0307412_10009695 Ga0307412_100096955 205
242 3300032002 Ga0307416_100004118 Ga0307416_1000041186 205
243 3300033180 Ga0307510_10076221 Ga0307510_100762213 205
244 3300041453 Ga0451797_1479067 Ga0451797_1479067_87_704 205
245 3300041463 Ga0451804_0047533 Ga0451804_0047533_176_799 205
246 3300041498 Ga0451841_1315363 Ga0451841_1315363_254_901 205
247 3300042532 Ga0450893_0022212 Ga0450893_0022212_248_973 205
248 3300044712 Ga0453684_0206595 Ga0453684_0206595_1500_2117 205
249 3300046453 Ga0495627_004465 Ga0495627_004465_4452_5075 205
250 3300046453 Ga0495627_012162 Ga0495627_012162_1421_2038 205
251 3300046460 Ga0495638_0128220 Ga0495638_0128220_25_642 205
252 3300046507 Ga0495606_0039406 Ga0495606_0039406_2482_3099 205
253 3300046512 Ga0495610_0043642 Ga0495610_0043642_915_1532 205
254 3300046513 Ga0495616_0002296 Ga0495616_0002296_4539_5156 205
255 3300046515 Ga0495620_0007322 Ga0495620_0007322_3564_4187 205
256 3300046515 Ga0495620_0066255 Ga0495620_0066255_156_773 205
257 3300046518 Ga0495631_0000334 Ga0495631_0000334_4603_5220 205
258 3300046520 Ga0495637_0001832 Ga0495637_0001832_8663_9286 205
259 3300046520 Ga0495637_0072576 Ga0495637_0072576_119_736 205
260 3300046522 Ga0495643_0093537 Ga0495643_0093537_734_1357 205
261 3300046530 Ga0495654_0161478 Ga0495654_0161478_178_801 205
262 3300046557 Ga0495622_0011744 Ga0495622_0011744_3172_3789 205
263 3300046660 Ga0495625_0162501 Ga0495625_0162501_68_691 205
264 3300046674 Ga0495588_0025115 Ga0495588_0025115_915_1535 205
265 3300046691 Ga0495670_0048351 Ga0495670_0048351_1459_2082 205
266 3300046691 Ga0495670_0087580 Ga0495670_0087580_125_742 205
267 3300046692 Ga0495671_0008007 Ga0495671_0008007_3877_4500 205
268 3300047321 Ga0495676_0024267 Ga0495676_0024267_46_663 205
269 3300048917 Ga0496114_0155545 Ga0496114_0155545_250_891 205
270 3300048919 Ga0496116_0239190 Ga0496116_0239190_257_874 205
271 3300048920 Ga0496117_0195301 Ga0496117_0195301_52_669 205
272 3300048920 Ga0496117_0224622 Ga0496117_0224622_60_677 205
273 3300048921 Ga0496118_0142672 Ga0496118_0142672_601_1218 205
274 3300048921 Ga0496118_0368193 Ga0496118_0368193_120_737 205
275 3300048924 Ga0496121_0032009 Ga0496121_0032009_3802_4419 205
276 3300048924 Ga0496121_0111597 Ga0496121_0111597_659_1276 205
277 3300048924 Ga0496121_0173489 Ga0496121_0173489_809_1426 205
278 3300048925 Ga0496122_0065856 Ga0496122_0065856_484_1101 205
279 3300048925 Ga0496122_0080498 Ga0496122_0080498_1249_1866 205
280 3300048925 Ga0496122_0136576 Ga0496122_0136576_121_738 205
281 3300048926 Ga0496123_0013667 Ga0496123_0013667_4735_5352 205
282 3300048926 Ga0496123_0055552 Ga0496123_0055552_673_1290 205
283 3300048926 Ga0496123_0075431 Ga0496123_0075431_431_1048 205
284 3300048927 Ga0496124_0056130 Ga0496124_0056130_413_1030 205
285 3300048927 Ga0496124_0170842 Ga0496124_0170842_13_630 205
286 3300048927 Ga0496124_0319856 Ga0496124_0319856_405_1022 205
287 3300048928 Ga0496125_0040149 Ga0496125_0040149_1160_1777 205
288 3300048928 Ga0496125_0195612 Ga0496125_0195612_280_897 205
289 3300050489 nmdc:mga03683_188662_c1 nmdc:mga03683_188662_c1_215_835 205
290 3300050491 nmdc:mga00v17_405786_c1 nmdc:mga00v17_405786_c1_34_654 205
291 3300050493 nmdc:mga0k408_2440_c1 nmdc:mga0k408_2440_c1_5313_5930 205
292 3300050493 nmdc:mga0k408_8024_c1 nmdc:mga0k408_8024_c1_1352_1972 205
293 3300050494 nmdc:mga06z11_100465_c1 nmdc:mga06z11_100465_c1_614_1234 205
294 3300050496 nmdc:mga07m45_235976_c1 nmdc:mga07m45_235976_c1_257_880 205
295 3300050496 nmdc:mga07m45_2920_c1 nmdc:mga07m45_2920_c1_7160_7780 205
296 3300050496 nmdc:mga07m45_424437_c1 nmdc:mga07m45_424437_c1_65_688 205
297 3300050496 nmdc:mga07m45_85998_c1 nmdc:mga07m45_85998_c1_260_877 205
298 3300053079 Ga0500610_0013259 Ga0500610_0013259_2003_2626 205
299 3300053079 Ga0500610_0028999 Ga0500610_0028999_967_1590 205
300 3300053087 Ga0500643_011157 Ga0500643_011157_1541_2158 205
301 3300053093 Ga0500651_0000064 Ga0500651_0000064_65274_65891 205
302 3300053094 Ga0500566_0057174 Ga0500566_0057174_897_1514 205
303 3300053096 Ga0500641_0049368 Ga0500641_0049368_1086_1706 205
304 3300053103 Ga0500555_043064 Ga0500555_043064_373_996 205
305 3300053109 Ga0500569_013294 Ga0500569_013294_1127_1750 205
306 3300053110 Ga0500571_001190 Ga0500571_001190_4570_5187 205
307 3300053117 Ga0500593_000439 Ga0500593_000439_10955_11578 205
308 3300053118 Ga0500594_0001105 Ga0500594_0001105_5058_5675 205
309 3300053120 Ga0500597_026326 Ga0500597_026326_694_1311 205
310 3300053121 Ga0500607_001602 Ga0500607_001602_5110_5733 205
311 3300053121 Ga0500607_052488 Ga0500607_052488_1198_1815 205
312 3300053136 Ga0500559_0004902 Ga0500559_0004902_4522_5139 205
313 3300053138 Ga0500564_000623 Ga0500564_000623_4600_5217 205
314 3300053139 Ga0500568_0011564 Ga0500568_0011564_353_970 205
315 3300053141 Ga0500574_035208 Ga0500574_035208_205_822 205
316 3300053151 Ga0500604_0044627 Ga0500604_0044627_52_669 205
317 3300053161 Ga0500634_0009517 Ga0500634_0009517_1478_2095 205
318 3300053161 Ga0500634_0045870 Ga0500634_0045870_1153_1776 205
319 3300053730 Ga0500645_003999 Ga0500645_003999_2540_3160 205
320 3300053734 Ga0500565_002092 Ga0500565_002092_263_880 205
321 3300053735 Ga0500596_036805 Ga0500596_036805_102_719 205

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

24

70

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pxi-assembly1.cif.gz_C elucidation of the structural and functional mechanism of action of the tetr family protein, cprb from s. coelicolor a3(2) 0.7501 15 202
5gpa-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.745 21 202
3whc-assembly2.cif.gz_D crystal structure of a transcriptional regulator fadr from bacillus subtilis in complex with stearoyl-coa 0.7438 19 202
5ovy-assembly1.cif.gz_A crystal structure of mab_4384 tetr 0.7346 17 205
7xy0-assembly1.cif.gz_B hapr double mutant y76f, f171c 0.732 1 204
ID Description Score Start End Superfamily
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9755 15 59 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9753 16 68 1.10.10.60
4x1eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9742 22 68 1.10.10.60
1jtyA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9728 19 65 1.10.10.60
3btlA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9719 19 65 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A840BW84-F1-model_v4 AcrR family transcriptional regulator 0.9729 5 205 GO:0000976
GO:0003700
AF-A0A2A7UQZ2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9657 1 204 GO:0000976
GO:0003700
AF-A0A1M5R0K7-F1-model_v4 Transcriptional regulator, TetR family 0.9632 5 202 GO:0000976
GO:0003700
AF-D0J6V7-F1-model_v4 deleted 0.9599 25 205
AF-A0A840BW84-F1-model_v4 AcrR family transcriptional regulator 0.9589 5 205 GO:0000976
GO:0003700

Feature Viewer

pLDDT pTM Quality
92.6 0.85 High
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Predicted Structure (AlphaFold2)

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