F406152

General Info

Members Datasets Scaffolds Average Seq Length
321 192 642 231

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0012711|Ga0496122_0012711_4150_4956
Length 268
Sequence MNRDPVALAGRRFHFPHPVFVLRNRPIRTCTHPAVRAAYAALALVLAFASIGLASAKETAAQPVAAVDELPRGQQVSDTVIELAGWVVAAKDSQGYPFAVIDKAAAQILVFGGDGRLRGAAPGLFGSATGDHTAPGVAGLALREIPGRDRTTPAGRFVGGFGPSIDAGRVLWVDYDSSVSLHPTATGVPAEKREERLASPSPDDNRITHGCINVTPEFYERIIRPTFERGGVFYILPDADPIAETFPDFARSHATTQRKDRKRARSAR

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300012488 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610 Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
39 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
43 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
44 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
77 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
78 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
79 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
89 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
90 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
91 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
92 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
95 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
96 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
97 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
100 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
101 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
105 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
106 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
107 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
151 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
152 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
153 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
154 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
155 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
156 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
157 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
158 2643221573 Lysobacter sp. Root604 Isolate Unclassified
159 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
160 2643221586 Lysobacter sp. Root667 Isolate Unclassified
161 2643221612 Lysobacter sp. Root76 Isolate Unclassified
162 2643221695 Lysobacter sp. Root494 Isolate Unclassified
163 2643221720 Lysobacter sp. Root916 Isolate Unclassified
164 2643221727 Lysobacter sp. Root96 Isolate Unclassified
165 2643221728 Lysobacter sp. Root983 Isolate Unclassified
166 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
167 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
168 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
169 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
170 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
171 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
172 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
173 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
174 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
175 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
176 2919513703 Luteimonas sp. 3794 Isolate Unclassified
177 2919675420 Luteimonas terrae 4099 Isolate Unclassified
178 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
179 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
180 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
181 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
182 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
183 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
184 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
185 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
186 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
187 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
188 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
189 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
190 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
191 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
192 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.85
Metatranscriptomes 0.31
Isolates 11.84

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 21.5
Nodule 0.31
Rhizoplane 4.98
Rhizosphere 46.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0012711 3300048925 Bacteria 8338
2 SwRhRL2b_contig_552046 2162886007 Bacteria 5327
3 JGI25150J39212_1001099 3300002774 Bacteria 8149
4 JGI25151J46595_10000084 3300003187 Bacteria 129555
5 JGI25151J46595_10005556 3300003187 Bacteria 6493
6 JGI25153J46596_10000063 3300003215 Bacteria 129500
7 rootH2_10138464 3300003320 Bacteria 1870
8 rootH1_10028467 3300003323 Bacteria 4336
9 Ga0055526_1001627 3300003771 Bacteria 15764
10 Ga0055537_1000244 3300003773 Bacteria 39860
11 Ga0055524_1000108 3300003775 Bacteria 100724
12 Ga0055536_1001060 3300003781 Bacteria 17335
13 Ga0055534_1000030 3300003784 Bacteria 121396
14 Ga0055534_1000219 3300003784 Bacteria 42036
15 Ga0055528_1000340 3300003790 Bacteria 38910
16 Ga0055530_10000168 3300003791 Bacteria 59457
17 Ga0055530_10006793 3300003791 Bacteria 4983
18 Ga0055531_10002591 3300003794 Bacteria 11976
19 Ga0055531_10003095 3300003794 Bacteria 10746
20 Ga0055531_10004523 3300003794 Bacteria 8437
21 Ga0055531_10005943 3300003794 Bacteria 7016
22 Ga0058692_1000009 3300003856 Bacteria 349545
23 Ga0065704_10070565 3300005289 Bacteria 20465
24 Ga0065704_10080369 3300005289 Bacteria 3954
25 Ga0065704_10110826 3300005289 Bacteria 1971
26 Ga0065715_10001443 3300005293 Bacteria 7492
27 Ga0070670_100399173 3300005331 Bacteria 1214
28 Ga0070668_100007470 3300005347 Bacteria 8110
29 Ga0070668_100077578 3300005347 Bacteria 2597
30 Ga0070675_100160490 3300005354 Bacteria 1933
31 Ga0070662_100437270 3300005457 Bacteria 1084
32 Ga0068867_100035122 3300005459 Bacteria 3635
33 Ga0070665_100044277 3300005548 Bacteria 4470
34 Ga0070665_100063795 3300005548 Bacteria 3694
35 Ga0068854_100051957 3300005578 Bacteria 2937
36 Ga0075364_10000127 3300006051 Bacteria 31803
37 Ga0075364_10010383 3300006051 Bacteria 5624
38 Ga0075367_10065422 3300006178 Bacteria 2177
39 Ga0105244_10044481 3300009036 Bacteria 2287
40 Ga0157343_1002447 3300012488 Bacteria 1012
41 Ga0157373_10047919 3300013100 Bacteria 3047
42 Ga0157371_10000209 3300013102 Bacteria 85823
43 Ga0157371_10010399 3300013102 Bacteria 7252
44 Ga0157370_10065122 3300013104 Bacteria 3449
45 Ga0157370_10224911 3300013104 Bacteria 1737
46 Ga0157369_10028522 3300013105 Bacteria 6178
47 Ga0163162_10193288 3300013306 Bacteria 2163
48 Ga0157380_10369383 3300014326 Bacteria 1349
49 Ga0182008_10000051 3300014497 Bacteria 103398
50 Ga0182008_10025338 3300014497 Bacteria 3012
51 Ga0182008_10063750 3300014497 Bacteria 1815
52 Ga0182008_10254402 3300014497 Bacteria 907
53 Ga0182006_1026638 3300015261 Bacteria 2365
54 Ga0182007_10000004 3300015262 Bacteria 485875
55 Ga0182005_1000408 3300015265 Bacteria 23300
56 Ga0163161_10025288 3300017792 Bacteria 4201
57 Ga0163161_10038694 3300017792 Bacteria 3421
58 Ga0163161_10047496 3300017792 Bacteria 3100
59 Ga0163161_10057788 3300017792 Bacteria 2819
60 Ga0206349_1337507 3300020075 Bacteria 1295
61 Ga0207425_1000011 3300025245 Bacteria 550735
62 Ga0209129_1000031 3300025258 Bacteria 383039
63 Ga0209565_1000024 3300025263 Bacteria 379907
64 Ga0209673_1000237 3300025273 Bacteria 106342
65 Ga0209673_1004646 3300025273 Bacteria 7264
66 Ga0209130_1003888 3300025284 Bacteria 6011
67 Ga0209675_1000107 3300025291 Bacteria 119593
68 Ga0209675_1011990 3300025291 Bacteria 2823
69 Ga0209675_1017126 3300025291 Bacteria 2079
70 Ga0209676_1000024 3300025292 Bacteria 578839
71 Ga0209676_1000550 3300025292 Bacteria 57330
72 Ga0209676_1003061 3300025292 Bacteria 10786
73 Ga0209676_1013283 3300025292 Bacteria 3176
74 Ga0209025_1000012 3300025294 Bacteria 924362
75 Ga0209025_1000864 3300025294 Bacteria 47865
76 Ga0209025_1042157 3300025294 Bacteria 1943
77 Ga0209564_1000422 3300025295 Bacteria 74531
78 Ga0209564_1001550 3300025295 Bacteria 22707
79 Ga0209564_1008567 3300025295 Bacteria 5021
80 Ga0209758_1000018 3300025297 Bacteria 753320
81 Ga0209758_1065036 3300025297 Bacteria 1179
82 Ga0209050_1000069 3300025298 Bacteria 297615
83 Ga0209050_1001161 3300025298 Bacteria 31304
84 Ga0209050_1047966 3300025298 Bacteria 1108
85 Ga0209256_1000178 3300025299 Bacteria 125165
86 Ga0209256_1003947 3300025299 Bacteria 9757
87 Ga0209256_1007508 3300025299 Bacteria 5352
88 Ga0209256_1009444 3300025299 Bacteria 4277
89 Ga0209051_1009223 3300025303 Bacteria 5106
90 Ga0209257_1000078 3300025304 Bacteria 317483
91 Ga0209257_1000737 3300025304 Bacteria 49659
92 Ga0209257_1000846 3300025304 Bacteria 43824
93 Ga0209257_1001482 3300025304 Bacteria 27561
94 Ga0209257_1007993 3300025304 Bacteria 6179
95 Ga0209257_1008461 3300025304 Bacteria 5837
96 Ga0209257_1014448 3300025304 Bacteria 3391
97 Ga0207688_10113606 3300025901 Bacteria 1574
98 Ga0207652_10120536 3300025921 Bacteria 2333
99 Ga0207650_10367927 3300025925 Bacteria 1185
100 Ga0207644_10252051 3300025931 Bacteria 1409
101 Ga0207709_10032914 3300025935 Bacteria 3040
102 Ga0207669_10265350 3300025937 Bacteria 1287
103 Ga0207691_10026112 3300025940 Bacteria 5481
104 Ga0207691_10113109 3300025940 Bacteria 2412
105 Ga0207679_10253070 3300025945 Bacteria 1498
106 Ga0207651_10442324 3300025960 Bacteria 1114
107 Ga0207668_10059929 3300025972 Bacteria 2669
108 Ga0207640_10032875 3300025981 Bacteria 3221
109 Ga0207648_10019313 3300026089 Bacteria 6151
110 Ga0207683_10032232 3300026121 Bacteria 4552
111 Ga0207698_10497568 3300026142 Bacteria 1186
112 Ga0209371_1000023 3300027312 Bacteria 519553
113 Ga0209813_10080457 3300027866 Bacteria 1076
114 Ga0268266_10147471 3300028379 Bacteria 2117
115 Ga0268265_10231664 3300028380 Bacteria 1624
116 Ga0268264_10153546 3300028381 Bacteria 2067
117 Ga0307515_10311781 3300028794 Bacteria 1248
118 Ga0268256_1000023 3300030500 Bacteria 519631
119 Ga0316176_1023297 3300030732 Bacteria 3999
120 Ga0314311_1042424 3300030733 Bacteria 1840
121 Ga0316182_1193264 3300030745 Bacteria 2669
122 Ga0307513_10008537 3300031456 Bacteria 13092
123 Ga0307408_100317158 3300031548 Bacteria 1312
124 Ga0307405_10402660 3300031731 Bacteria 1072
125 Ga0307413_10057360 3300031824 Bacteria 2381
126 Ga0307412_10000376 3300031911 Bacteria 27824
127 Ga0307414_10000449 3300032004 Bacteria 21733
128 Ga0307414_10013589 3300032004 Bacteria 4852
129 Ga0307414_10076423 3300032004 Bacteria 2433
130 Ga0307414_10140296 3300032004 Bacteria 1891
131 Ga0307414_10174109 3300032004 Bacteria 1724
132 Ga0307414_10214606 3300032004 Bacteria 1575
133 Ga0307414_10341822 3300032004 Bacteria 1281
134 Ga0395905_0003601 3300037471 Bacteria 16475
135 Ga0395905_0017434 3300037471 Bacteria 6817
136 Ga0395905_0207599 3300037471 Bacteria 1836
137 Ga0395901_0004630 3300038443 Bacteria 13882
138 Ga0395901_0145174 3300038443 Bacteria 2494
139 Ga0237819_00726 3300038705 Bacteria 10596
140 Ga0439436_0018360 3300041404 Bacteria 2091
141 Ga0439436_0061374 3300041404 Bacteria 1052
142 Ga0439465_0000044 3300041413 Bacteria 25602
143 Ga0439465_0029440 3300041413 Bacteria 1744
144 Ga0439465_0037833 3300041413 Bacteria 1552
145 Ga0451797_0176031 3300041453 Bacteria 2645
146 Ga0451807_0552901 3300041486 Bacteria 1112
147 Ga0451807_2506255 3300041486 Bacteria 1417
148 Ga0451837_1325254 3300041494 Bacteria 2586
149 Ga0451843_0291000 3300041509 Bacteria 2682
150 Ga0439431_0006755 3300041997 Bacteria 2547
151 Ga0439445_0045074 3300042004 Bacteria 1179
152 Ga0439432_028959 3300042006 Bacteria 1802
153 Ga0439432_032147 3300042006 Bacteria 1694
154 Ga0439449_0002832 3300042007 Bacteria 6746
155 Ga0439449_0010612 3300042007 Bacteria 3479
156 Ga0439449_0022757 3300042007 Bacteria 2346
157 Ga0439449_0135376 3300042007 Bacteria 916
158 Ga0439449_0143762 3300042007 Bacteria 888
159 Ga0439452_012149 3300042010 Bacteria 2458
160 Ga0450911_000332 3300042115 Bacteria 16931
161 Ga0495627_001574 3300046453 Bacteria 12931
162 Ga0495627_094724 3300046453 Bacteria 856
163 Ga0495638_0000409 3300046460 Bacteria 52476
164 Ga0495610_0000177 3300046512 Bacteria 70985
165 Ga0495610_0040798 3300046512 Bacteria 2336
166 Ga0495610_0195682 3300046512 Bacteria 831
167 Ga0495631_0000006 3300046518 Bacteria 132262
168 Ga0495643_0000086 3300046522 Bacteria 156793
169 Ga0495663_0000170 3300046525 Bacteria 26093
170 Ga0495663_0000172 3300046525 Bacteria 26082
171 Ga0495663_0000190 3300046525 Bacteria 24566
172 Ga0495663_0011254 3300046525 Bacteria 2490
173 Ga0495663_0144972 3300046525 Bacteria 808
174 Ga0495598_0030588 3300046537 Bacteria 1509
175 Ga0495633_0001441 3300046558 Bacteria 18501
176 Ga0495633_0007612 3300046558 Bacteria 6202
177 Ga0495633_0025668 3300046558 Bacteria 2900
178 Ga0495633_0240557 3300046558 Bacteria 827
179 Ga0495656_0000310 3300046615 Bacteria 16879
180 Ga0495656_0012593 3300046615 Bacteria 3126
181 Ga0495625_0014693 3300046660 Bacteria 6236
182 Ga0495625_0028516 3300046660 Bacteria 4186
183 Ga0495671_0020044 3300046692 Bacteria 3528
184 Ga0495660_0022203 3300046810 Bacteria 3626
185 Ga0495636_0030423 3300047318 Bacteria 2207
186 Ga0495636_0309643 3300047318 Bacteria 740
187 Ga0495672_0000006 3300047320 Bacteria 589807
188 Ga0495677_0058667 3300047445 Bacteria 1424
189 Ga0495681_0029677 3300047470 Bacteria 2796
190 Ga0495686_0005231 3300047472 Bacteria 10304
191 Ga0495686_0054931 3300047472 Bacteria 2492
192 Ga0496100_0503367 3300048903 Bacteria 933
193 Ga0496101_0011109 3300048904 Bacteria 5967
194 Ga0496101_0076868 3300048904 Bacteria 2460
195 Ga0496103_0189687 3300048906 Bacteria 1322
196 Ga0496104_0038574 3300048907 Bacteria 4471
197 Ga0496107_0777661 3300048910 Bacteria 702
198 Ga0496108_0031872 3300048911 Bacteria 4375
199 Ga0496109_0271603 3300048912 Bacteria 1597
200 Ga0496109_0325963 3300048912 Bacteria 1450
201 Ga0496110_0344929 3300048913 Bacteria 1356
202 Ga0496111_0313951 3300048914 Bacteria 1161
203 Ga0496113_0004788 3300048916 Bacteria 8365
204 Ga0496113_0006976 3300048916 Bacteria 7223
205 Ga0496116_0000754 3300048919 Bacteria 41159
206 Ga0496116_0000987 3300048919 Bacteria 34890
207 Ga0496116_0014847 3300048919 Bacteria 6190
208 Ga0496116_0016554 3300048919 Bacteria 5762
209 Ga0496116_0226985 3300048919 Bacteria 951
210 Ga0496117_0000779 3300048920 Bacteria 50165
211 Ga0496117_0003178 3300048920 Bacteria 19525
212 Ga0496117_0029282 3300048920 Bacteria 4248
213 Ga0496117_0210407 3300048920 Bacteria 1091
214 Ga0496118_0000382 3300048921 Bacteria 74559
215 Ga0496118_0000497 3300048921 Bacteria 65119
216 Ga0496118_0000500 3300048921 Bacteria 64878
217 Ga0496118_0004265 3300048921 Bacteria 17101
218 Ga0496118_0035030 3300048921 Bacteria 4084
219 Ga0496118_0107517 3300048921 Bacteria 1862
220 Ga0496119_0000047 3300048922 Bacteria 188401
221 Ga0496119_0005285 3300048922 Bacteria 12434
222 Ga0496119_0058467 3300048922 Bacteria 2323
223 Ga0496120_0000041 3300048923 Bacteria 200518
224 Ga0496121_0003278 3300048924 Bacteria 23231
225 Ga0496121_0008778 3300048924 Bacteria 11789
226 Ga0496121_0080202 3300048924 Bacteria 2588
227 Ga0496121_0124589 3300048924 Bacteria 1939
228 Ga0496122_0000967 3300048925 Bacteria 51549
229 Ga0496122_0001593 3300048925 Bacteria 35535
230 Ga0496122_0002028 3300048925 Bacteria 30069
231 Ga0496122_0004676 3300048925 Bacteria 16809
232 Ga0496123_0001229 3300048926 Bacteria 37263
233 Ga0496123_0001279 3300048926 Bacteria 35949
234 Ga0496123_0003040 3300048926 Bacteria 19332
235 Ga0496123_0003353 3300048926 Bacteria 18121
236 Ga0496123_0072094 3300048926 Bacteria 2151
237 Ga0496123_0098252 3300048926 Bacteria 1712
238 Ga0496124_0001070 3300048927 Bacteria 43255
239 Ga0496124_0002696 3300048927 Bacteria 22707
240 Ga0496124_0003371 3300048927 Bacteria 19625
241 Ga0496124_0003607 3300048927 Bacteria 18803
242 Ga0496124_0005572 3300048927 Bacteria 14100
243 Ga0496124_0027341 3300048927 Bacteria 5121
244 Ga0496124_0041917 3300048927 Bacteria 3945
245 Ga0496124_0056257 3300048927 Bacteria 3318
246 Ga0496124_0064135 3300048927 Bacteria 3068
247 Ga0496124_0140298 3300048927 Bacteria 1908
248 Ga0496124_0164045 3300048927 Bacteria 1729
249 Ga0496124_0338550 3300048927 Bacteria 1069
250 Ga0496125_0000197 3300048928 Bacteria 129154
251 Ga0496125_0000709 3300048928 Bacteria 55274
252 Ga0496125_0003121 3300048928 Bacteria 20594
253 Ga0496125_0008411 3300048928 Bacteria 10807
254 Ga0496125_0373835 3300048928 Bacteria 842
255 Ga0496126_0000238 3300048929 Bacteria 118994
256 Ga0496126_0013929 3300048929 Bacteria 8159
257 Ga0496126_0029522 3300048929 Bacteria 5209
258 Ga0496126_0039065 3300048929 Bacteria 4408
259 Ga0496126_0046335 3300048929 Bacteria 3989
260 Ga0501033_0265909 3300049570 Bacteria 1213
261 Ga0501034_0000598 3300049571 Bacteria 56882
262 Ga0501034_0014236 3300049571 Bacteria 8199
263 Ga0501034_0119420 3300049571 Bacteria 2623
264 Ga0501037_0176226 3300049573 Bacteria 1518
265 Ga0501038_0118733 3300049574 Bacteria 2183
266 Ga0501070_0112612 3300049586 Bacteria 2249
267 Ga0501071_0138286 3300049587 Bacteria 1813
268 Ga0501072_0505252 3300049588 Bacteria 956
269 Ga0501073_0086825 3300049589 Bacteria 2176
270 Ga0501252_029592 3300049682 Bacteria 754
271 Ga0501044_0257934 3300049823 Bacteria 1682
272 nmdc:mga03n38_85770_c1 3300050490 Bacteria 1489
273 nmdc:mga00v17_102528_c1 3300050491 Bacteria 1808
274 nmdc:mga00v17_189049_c1 3300050491 Bacteria 1330
275 nmdc:mga00v17_255_c1 3300050491 Bacteria 31356
276 nmdc:mga00v17_292560_c1 3300050491 Bacteria 1058
277 nmdc:mga00v17_38547_c1 3300050491 Bacteria 2858
278 nmdc:mga00v17_7101_c1 3300050491 Bacteria 5965
279 nmdc:mga06z11_47416_c1 3300050494 Bacteria 2182
280 nmdc:mga04h51_95214_c1 3300050495 Bacteria 1077
281 Ga0500646_0018410 3300053090 Bacteria 1839
282 Ga0500626_064304 3300053128 Bacteria 1638
283 Ga0500565_000075 3300053734 Bacteria 4783
284 2547502762 2547132130 Bacteria 4660562
285 2572253621 2571042365 Bacteria 3289345
286 2578456749 2576861471 Bacteria 4648976
287 2643880609 2643221573 Bacteria 4784121
288 2643908414 2643221579 Bacteria 4443405
289 2643941085 2643221586 Bacteria 4446529
290 2644079875 2643221612 Bacteria 4361984
291 2644528937 2643221695 Bacteria 3441323
292 2644661180 2643221720 Bacteria 4694283
293 2644695471 2643221727 Bacteria 4415595
294 2644699256 2643221728 Bacteria 4797149
295 2747947576 2747842428 Bacteria 4689383
296 2816519732 2816332141 Bacteria 4436036
297 2842393322 2842391507 Bacteria 4486072
298 2842757994 2842757796 Bacteria 3981385
299 2852650519 2852649853 Bacteria 4036942
300 2857443561 2857442823 Bacteria 4562550
301 2895503673 2895498888 Bacteria 5283788
302 2895515559 2895511927 Bacteria 6802080
303 2895524740 2895522137 Bacteria 3284416
304 2919138610 2919134579 Bacteria 4480386
305 2919514462 2919513703 Bacteria 3844312
306 2919678840 2919675420 Bacteria 3969095
307 2923518820 2923516293 Bacteria 3716336
308 2928498062 2928496128 Bacteria 4631123
309 2931382599 2931380184 Bacteria 4455911
310 2939591643 2939589442 Bacteria 4214238
311 2939624444 2939622612 Bacteria 4698046
312 2939628010 2939626828 Bacteria 4695272
313 2941476117 2941475908 Bacteria 4145589
314 2961050728 2961047084 Bacteria 4594415
315 2961068032 2961064222 Bacteria 4749990
316 2974308823 2974307012 Bacteria 4172388
317 2977249542 2977247770 Bacteria 4160543
318 2984515969 2984514374 Bacteria 4172479
319 2987606366 2987605356 Bacteria 4187822
320 8002869994 8002869464 Bacteria 3588529
321 8003014242 8003014200 Bacteria 4059994
322 Ga0496122_0012711
323 SwRhRL2b_contig_552046
324 JGI25150J39212_1001099
325 JGI25151J46595_10000084
326 JGI25151J46595_10005556
327 JGI25153J46596_10000063
328 rootH2_10138464
329 rootH1_10028467
330 Ga0055526_1001627
331 Ga0055537_1000244
332 Ga0055524_1000108
333 Ga0055536_1001060
334 Ga0055534_1000030
335 Ga0055534_1000219
336 Ga0055528_1000340
337 Ga0055530_10000168
338 Ga0055530_10006793
339 Ga0055531_10002591
340 Ga0055531_10003095
341 Ga0055531_10004523
342 Ga0055531_10005943
343 Ga0058692_1000009
344 Ga0065704_10070565
345 Ga0065704_10080369
346 Ga0065704_10110826
347 Ga0065715_10001443
348 Ga0070670_100399173
349 Ga0070668_100007470
350 Ga0070668_100077578
351 Ga0070675_100160490
352 Ga0070662_100437270
353 Ga0068867_100035122
354 Ga0070665_100044277
355 Ga0070665_100063795
356 Ga0068854_100051957
357 Ga0075364_10000127
358 Ga0075364_10010383
359 Ga0075367_10065422
360 Ga0105244_10044481
361 Ga0157343_1002447
362 Ga0157373_10047919
363 Ga0157371_10000209
364 Ga0157371_10010399
365 Ga0157370_10065122
366 Ga0157370_10224911
367 Ga0157369_10028522
368 Ga0163162_10193288
369 Ga0157380_10369383
370 Ga0182008_10000051
371 Ga0182008_10025338
372 Ga0182008_10063750
373 Ga0182008_10254402
374 Ga0182006_1026638
375 Ga0182007_10000004
376 Ga0182005_1000408
377 Ga0163161_10025288
378 Ga0163161_10038694
379 Ga0163161_10047496
380 Ga0163161_10057788
381 Ga0206349_1337507
382 Ga0207425_1000011
383 Ga0209129_1000031
384 Ga0209565_1000024
385 Ga0209673_1000237
386 Ga0209673_1004646
387 Ga0209130_1003888
388 Ga0209675_1000107
389 Ga0209675_1011990
390 Ga0209675_1017126
391 Ga0209676_1000024
392 Ga0209676_1000550
393 Ga0209676_1003061
394 Ga0209676_1013283
395 Ga0209025_1000012
396 Ga0209025_1000864
397 Ga0209025_1042157
398 Ga0209564_1000422
399 Ga0209564_1001550
400 Ga0209564_1008567
401 Ga0209758_1000018
402 Ga0209758_1065036
403 Ga0209050_1000069
404 Ga0209050_1001161
405 Ga0209050_1047966
406 Ga0209256_1000178
407 Ga0209256_1003947
408 Ga0209256_1007508
409 Ga0209256_1009444
410 Ga0209051_1009223
411 Ga0209257_1000078
412 Ga0209257_1000737
413 Ga0209257_1000846
414 Ga0209257_1001482
415 Ga0209257_1007993
416 Ga0209257_1008461
417 Ga0209257_1014448
418 Ga0207688_10113606
419 Ga0207652_10120536
420 Ga0207650_10367927
421 Ga0207644_10252051
422 Ga0207709_10032914
423 Ga0207669_10265350
424 Ga0207691_10026112
425 Ga0207691_10113109
426 Ga0207679_10253070
427 Ga0207651_10442324
428 Ga0207668_10059929
429 Ga0207640_10032875
430 Ga0207648_10019313
431 Ga0207683_10032232
432 Ga0207698_10497568
433 Ga0209371_1000023
434 Ga0209813_10080457
435 Ga0268266_10147471
436 Ga0268265_10231664
437 Ga0268264_10153546
438 Ga0307515_10311781
439 Ga0268256_1000023
440 Ga0316176_1023297
441 Ga0314311_1042424
442 Ga0316182_1193264
443 Ga0307513_10008537
444 Ga0307408_100317158
445 Ga0307405_10402660
446 Ga0307413_10057360
447 Ga0307412_10000376
448 Ga0307414_10000449
449 Ga0307414_10013589
450 Ga0307414_10076423
451 Ga0307414_10140296
452 Ga0307414_10174109
453 Ga0307414_10214606
454 Ga0307414_10341822
455 Ga0395905_0003601
456 Ga0395905_0017434
457 Ga0395905_0207599
458 Ga0395901_0004630
459 Ga0395901_0145174
460 Ga0237819_00726
461 Ga0439436_0018360
462 Ga0439436_0061374
463 Ga0439465_0000044
464 Ga0439465_0029440
465 Ga0439465_0037833
466 Ga0451797_0176031
467 Ga0451807_0552901
468 Ga0451807_2506255
469 Ga0451837_1325254
470 Ga0451843_0291000
471 Ga0439431_0006755
472 Ga0439445_0045074
473 Ga0439432_028959
474 Ga0439432_032147
475 Ga0439449_0002832
476 Ga0439449_0010612
477 Ga0439449_0022757
478 Ga0439449_0135376
479 Ga0439449_0143762
480 Ga0439452_012149
481 Ga0450911_000332
482 Ga0495627_001574
483 Ga0495627_094724
484 Ga0495638_0000409
485 Ga0495610_0000177
486 Ga0495610_0040798
487 Ga0495610_0195682
488 Ga0495631_0000006
489 Ga0495643_0000086
490 Ga0495663_0000170
491 Ga0495663_0000172
492 Ga0495663_0000190
493 Ga0495663_0011254
494 Ga0495663_0144972
495 Ga0495598_0030588
496 Ga0495633_0001441
497 Ga0495633_0007612
498 Ga0495633_0025668
499 Ga0495633_0240557
500 Ga0495656_0000310
501 Ga0495656_0012593
502 Ga0495625_0014693
503 Ga0495625_0028516
504 Ga0495671_0020044
505 Ga0495660_0022203
506 Ga0495636_0030423
507 Ga0495636_0309643
508 Ga0495672_0000006
509 Ga0495677_0058667
510 Ga0495681_0029677
511 Ga0495686_0005231
512 Ga0495686_0054931
513 Ga0496100_0503367
514 Ga0496101_0011109
515 Ga0496101_0076868
516 Ga0496103_0189687
517 Ga0496104_0038574
518 Ga0496107_0777661
519 Ga0496108_0031872
520 Ga0496109_0271603
521 Ga0496109_0325963
522 Ga0496110_0344929
523 Ga0496111_0313951
524 Ga0496113_0004788
525 Ga0496113_0006976
526 Ga0496116_0000754
527 Ga0496116_0000987
528 Ga0496116_0014847
529 Ga0496116_0016554
530 Ga0496116_0226985
531 Ga0496117_0000779
532 Ga0496117_0003178
533 Ga0496117_0029282
534 Ga0496117_0210407
535 Ga0496118_0000382
536 Ga0496118_0000497
537 Ga0496118_0000500
538 Ga0496118_0004265
539 Ga0496118_0035030
540 Ga0496118_0107517
541 Ga0496119_0000047
542 Ga0496119_0005285
543 Ga0496119_0058467
544 Ga0496120_0000041
545 Ga0496121_0003278
546 Ga0496121_0008778
547 Ga0496121_0080202
548 Ga0496121_0124589
549 Ga0496122_0000967
550 Ga0496122_0001593
551 Ga0496122_0002028
552 Ga0496122_0004676
553 Ga0496123_0001229
554 Ga0496123_0001279
555 Ga0496123_0003040
556 Ga0496123_0003353
557 Ga0496123_0072094
558 Ga0496123_0098252
559 Ga0496124_0001070
560 Ga0496124_0002696
561 Ga0496124_0003371
562 Ga0496124_0003607
563 Ga0496124_0005572
564 Ga0496124_0027341
565 Ga0496124_0041917
566 Ga0496124_0056257
567 Ga0496124_0064135
568 Ga0496124_0140298
569 Ga0496124_0164045
570 Ga0496124_0338550
571 Ga0496125_0000197
572 Ga0496125_0000709
573 Ga0496125_0003121
574 Ga0496125_0008411
575 Ga0496125_0373835
576 Ga0496126_0000238
577 Ga0496126_0013929
578 Ga0496126_0029522
579 Ga0496126_0039065
580 Ga0496126_0046335
581 Ga0501033_0265909
582 Ga0501034_0000598
583 Ga0501034_0014236
584 Ga0501034_0119420
585 Ga0501037_0176226
586 Ga0501038_0118733
587 Ga0501070_0112612
588 Ga0501071_0138286
589 Ga0501072_0505252
590 Ga0501073_0086825
591 Ga0501252_029592
592 Ga0501044_0257934
593 nmdc:mga03n38_85770_c1
594 nmdc:mga00v17_102528_c1
595 nmdc:mga00v17_189049_c1
596 nmdc:mga00v17_255_c1
597 nmdc:mga00v17_292560_c1
598 nmdc:mga00v17_38547_c1
599 nmdc:mga00v17_7101_c1
600 nmdc:mga06z11_47416_c1
601 nmdc:mga04h51_95214_c1
602 Ga0500646_0018410
603 Ga0500626_064304
604 Ga0500565_000075
605 2547502762
606 2572253621
607 2578456749
608 2643880609
609 2643908414
610 2643941085
611 2644079875
612 2644528937
613 2644661180
614 2644695471
615 2644699256
616 2747947576
617 2816519732
618 2842393322
619 2842757994
620 2852650519
621 2857443561
622 2895503673
623 2895515559
624 2895524740
625 2919138610
626 2919514462
627 2919678840
628 2923518820
629 2928498062
630 2931382599
631 2939591643
632 2939624444
633 2939628010
634 2941476117
635 2961050728
636 2961068032
637 2974308823
638 2977249542
639 2984515969
640 2987606366
641 8002869994
642 8003014242

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nql-assembly1.cif.gz_AK 55s mammalian mitochondrial ribosome with ict1 and p site trnamet 0.7874 53 78
8oip-assembly1.cif.gz_Ai 28s mammalian mitochondrial small ribosomal subunit with mtrf1 and p-site trna 0.7849 51 78
8any-assembly1.cif.gz_AI human mitochondrial ribosome in complex with lrpprc, slirp, a-site, p-site, e-site trnas and mrna 0.7836 53 78
6u7g-assembly1.cif.gz_A hcov-229e rbd class v in complex with human apn 0.6903 52 68
6u7g-assembly2.cif.gz_B hcov-229e rbd class v in complex with human apn 0.6841 52 68
ID Description Score Start End Superfamily
af_Q6Z3Y6_80_338_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8849 53 67 3.90.550.10
af_C0H478_76_387_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7888 53 67 2.120.10.80
af_Q23155_77_208_3.30.420.80 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribosomal protein S11/S14 0.7694 52 78 3.30.420.80
af_A0A1D8PMB3_8_308_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.7469 53 78 3.30.420.40
6nf8K00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribosomal protein S11/S14 0.7345 51 74 3.30.420.80
ID Description Score Start End GO Terms
AF-A0A2W5LPD3-F1-model_v4 deleted 0.8811 35 226
AF-A0A2W5LPD3-F1-model_v4 deleted 0.8767 35 226
AF-A0A4Q3P124-F1-model_v4 deleted 0.8744 111 204
AF-A0A0H1ARP7-F1-model_v4 YkuD domain-containing protein 0.8737 12 214
AF-A0A4Q3VFX4-F1-model_v4 L,D-transpeptidase 0.8683 10 216

Map