F406191

General Info

Members Datasets Scaffolds Average Seq Length
321 260 642 334

Family's Representative Sequence

Representative Sequence 3300053086|Ga0500578_0040276|Ga0500578_0040276_1796_2938
Length 380
Sequence MSWCFPWGADLRLAISLERSNNSFNRSNDFSCKGDAVASNAQIGWGLIGASTIAAEHMIGAVRAQPGHEVVAVASSNAQRAKGYAEKHRIAGAYDSVAALLADPAVQVVYVSTTNELHRDQVLAAAAAGKHVLCEKPLALSLDDAQRMLRACAAAGVVMATNHHLRNAATHRKIRDLVQGGAIGKPLFARVFHAVYLPLHLQGWRLDKPAAGGGVILDICVHDADTLRFILGAEPVEAIGLSQSALLAREGLEDGVMAVLRFDNGVLAQLHDAFTTPFAGTGIEIHGDKGSIIGRNVMTQQPVGDVLLRDAGGERVVAVQHESLYARGVASFCAAIRGEGEPAATADDGLRSLAAALAIADACRSGARVRVDAVQAQELP

Samples

Sample ID Description Type Environment
1 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
47 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
75 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
123 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
124 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
125 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
158 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
159 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
160 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
161 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
162 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
163 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
164 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
165 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
166 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
167 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
168 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
169 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
170 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
171 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
172 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
173 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
174 2643221599 Rhizobium sp. Root708 Isolate Unclassified
175 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
176 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
177 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
178 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
179 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
180 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
181 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
182 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
183 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
184 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
185 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
186 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
187 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
188 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
189 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
190 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
191 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
192 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
193 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
194 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
195 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
196 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
197 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
198 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
199 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
200 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
201 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
202 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
203 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
204 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
205 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
206 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
207 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
208 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
209 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
210 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
211 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
212 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
213 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
214 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
215 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
216 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
217 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
218 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
219 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
220 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
221 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
222 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
223 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
224 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
225 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
226 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
227 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
228 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
229 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
230 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
231 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
232 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
233 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
234 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
235 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
236 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
237 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
238 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
239 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
240 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
241 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
242 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
243 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
244 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
245 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
246 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
247 2996887358 Rhizobium sp. R711 Isolate Nodule
248 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
249 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
250 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
251 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
252 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
253 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
254 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
255 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
256 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
257 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
258 8005258706 Rhizobium sp. R693 Isolate Nodule
259 8005321885 Rhizobium sp. R72 Isolate Nodule
260 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 66.67
Metatranscriptomes 0
Isolates 33.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.36
Nodule 23.36
Rhizoplane 3.12
Rhizosphere 50.47
Stem 0
Stem Tuber 0
Unclassified 0.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500578_0040276 3300053086 Bacteria 3002
2 JGI25155J39150_1000017 3300002704 Bacteria 159274
3 JGI25156J39149_1000034 3300002705 Bacteria 114036
4 JGI25154J39366_1000034 3300002738 Bacteria 176764
5 JGI25157J39369_1000137 3300002741 Bacteria 61333
6 Ga0070683_100021191 3300005329 Bacteria 5796
7 Ga0068869_100010110 3300005334 Bacteria 6139
8 Ga0068868_100091805 3300005338 Bacteria 2447
9 Ga0068868_100115613 3300005338 Bacteria 2184
10 Ga0070689_100246543 3300005340 Bacteria 1473
11 Ga0070661_100244343 3300005344 Bacteria 1383
12 Ga0070674_100289737 3300005356 Bacteria 1301
13 Ga0070667_100314845 3300005367 Bacteria 1411
14 Ga0068867_100000034 3300005459 Bacteria 81468
15 Ga0070697_100019902 3300005536 Bacteria 5304
16 Ga0070697_100036692 3300005536 Bacteria 3959
17 Ga0070665_100073097 3300005548 Bacteria 3436
18 Ga0070665_100212990 3300005548 Bacteria 1933
19 Ga0068855_100000355 3300005563 Bacteria 56724
20 Ga0068855_100555721 3300005563 Bacteria 1242
21 Ga0068856_100207232 3300005614 Bacteria 1975
22 Ga0068859_100086484 3300005617 Bacteria 3182
23 Ga0068859_100412246 3300005617 Bacteria 1447
24 Ga0068864_100033420 3300005618 Bacteria 4372
25 Ga0068861_100107545 3300005719 Bacteria 2230
26 Ga0068863_100042626 3300005841 Bacteria 4312
27 Ga0068858_100032310 3300005842 Bacteria 4861
28 Ga0068860_100107663 3300005843 Bacteria 2664
29 Ga0068860_100185020 3300005843 Bacteria 2014
30 Ga0070717_10000010 3300006028 Bacteria 283501
31 Ga0075365_10000340 3300006038 Bacteria 16674
32 Ga0075368_10015558 3300006042 Bacteria 2825
33 Ga0075368_10069125 3300006042 Bacteria 1424
34 Ga0075367_10042889 3300006178 Bacteria 2649
35 Ga0075366_10064840 3300006195 Bacteria 2172
36 Ga0075429_100006181 3300006880 Bacteria 10352
37 Ga0068865_100281728 3300006881 Bacteria 1323
38 Ga0097620_100086488 3300006931 Bacteria 3182
39 Ga0097620_100412235 3300006931 Bacteria 1447
40 Ga0099826_10001593 3300006948 Bacteria 13827
41 Ga0105240_10000216 3300009093 Bacteria 115800
42 Ga0105240_10068706 3300009093 Bacteria 4388
43 Ga0105245_10319081 3300009098 Bacteria 1530
44 Ga0105243_10000467 3300009148 Bacteria 41810
45 Ga0105243_10136448 3300009148 Bacteria 2087
46 Ga0105242_10078295 3300009176 Bacteria 2759
47 Ga0105248_10029747 3300009177 Bacteria 6096
48 Ga0105237_10000536 3300009545 Bacteria 53573
49 Ga0105239_10116236 3300010375 Bacteria 2968
50 Ga0105239_10143686 3300010375 Bacteria 2660
51 Ga0105239_10183329 3300010375 Bacteria 2342
52 Ga0157370_10000183 3300013104 Bacteria 78649
53 Ga0157378_10116326 3300013297 Bacteria 2459
54 Ga0157378_10294044 3300013297 Bacteria 1570
55 Ga0157375_10175341 3300013308 Bacteria 2293
56 Ga0157375_10189238 3300013308 Bacteria 2212
57 Ga0157375_10367780 3300013308 Bacteria 1604
58 Ga0182008_10033631 3300014497 Bacteria 2572
59 Ga0157377_10000067 3300014745 Bacteria 80888
60 Ga0182007_10009370 3300015262 Bacteria 3952
61 Ga0209435_100023 3300025206 Bacteria 201972
62 Ga0209646_1000080 3300025246 Bacteria 201975
63 Ga0209026_1000076 3300025250 Bacteria 201975
64 Ga0209677_100216 3300025253 Bacteria 42627
65 Ga0209759_1000059 3300025256 Bacteria 201975
66 Ga0209233_1000428 3300025261 Bacteria 30724
67 Ga0209025_1005660 3300025294 Bacteria 10065
68 Ga0209758_1013670 3300025297 Bacteria 4400
69 Ga0209051_1001033 3300025303 Bacteria 26324
70 Ga0209051_1008811 3300025303 Bacteria 5288
71 Ga0207695_10000319 3300025913 Bacteria 116116
72 Ga0207695_10108736 3300025913 Bacteria 2756
73 Ga0207671_10000078 3300025914 Bacteria 150705
74 Ga0207687_10038899 3300025927 Bacteria 3253
75 Ga0207690_10239817 3300025932 Bacteria 1396
76 Ga0207686_10086529 3300025934 Bacteria 2059
77 Ga0207709_10000648 3300025935 Bacteria 28257
78 Ga0207669_10267095 3300025937 Bacteria 1283
79 Ga0207665_10030755 3300025939 Unclassified 3550
80 Ga0207689_10005264 3300025942 Bacteria 11596
81 Ga0207667_10003426 3300025949 Bacteria 19572
82 Ga0207667_10538472 3300025949 Bacteria 1182
83 Ga0207658_10314488 3300025986 Bacteria 1354
84 Ga0207677_10085038 3300026023 Bacteria 2282
85 Ga0207702_10171137 3300026078 Bacteria 1992
86 Ga0207641_10121483 3300026088 Bacteria 2332
87 Ga0207641_10174500 3300026088 Bacteria 1965
88 Ga0207648_10000845 3300026089 Bacteria 34563
89 Ga0207648_10024338 3300026089 Bacteria 5407
90 Ga0207676_10156856 3300026095 Bacteria 1967
91 Ga0207675_100009406 3300026118 Bacteria 9157
92 Ga0207683_10064549 3300026121 Bacteria 3226
93 Ga0207698_10607280 3300026142 Bacteria 1079
94 Ga0209282_1026428 3300027666 Bacteria 3616
95 Ga0209813_10015552 3300027866 Bacteria 2064
96 Ga0268266_10213145 3300028379 Bacteria 1772
97 Ga0268264_10115749 3300028381 Bacteria 2356
98 Ga0307515_10000017 3300028794 Bacteria 550465
99 Ga0307515_10000208 3300028794 Bacteria 144484
100 Ga0307515_10076720 3300028794 Bacteria 4427
101 Ga0307515_10107770 3300028794 Bacteria 3289
102 Ga0307515_10132599 3300028794 Bacteria 2732
103 Ga0265328_10076116 3300031239 Bacteria 1235
104 Ga0265331_10031405 3300031250 Bacteria 2639
105 Ga0265327_10000746 3300031251 Bacteria 50605
106 Ga0307513_10006404 3300031456 Bacteria 15387
107 Ga0307513_10022587 3300031456 Bacteria 7388
108 Ga0307508_10117755 3300031616 Bacteria 2258
109 Ga0265314_10017265 3300031711 Bacteria 5670
110 Ga0307516_10135908 3300031730 Bacteria 2233
111 Ga0307413_10057308 3300031824 Bacteria 2382
112 Ga0307409_100091187 3300031995 Unclassified 2497
113 Ga0307415_100126751 3300032126 Bacteria 1925
114 Ga0307415_100127434 3300032126 Unclassified 1921
115 Ga0395899_0000595 3300037312 Bacteria 37965
116 Ga0395899_0003974 3300037312 Bacteria 11648
117 Ga0395899_0261821 3300037312 Bacteria 1183
118 Ga0395900_0017637 3300037418 Bacteria 7285
119 Ga0395900_0023296 3300037418 Bacteria 6337
120 Ga0395900_0369992 3300037418 Bacteria 1403
121 Ga0395898_0048558 3300037466 Bacteria 4161
122 Ga0395905_0006360 3300037471 Bacteria 11906
123 Ga0395905_0032180 3300037471 Bacteria 4933
124 Ga0395905_0045693 3300037471 Bacteria 4107
125 Ga0395905_0132611 3300037471 Bacteria 2343
126 Ga0395901_0003325 3300038443 Bacteria 16197
127 Ga0395901_0160571 3300038443 Bacteria 2361
128 Ga0436361_1104292 3300039447 Bacteria 1615
129 Ga0451807_0223401 3300041486 Bacteria 1548
130 Ga0466972_0001140 3300044658 Bacteria 12730
131 Ga0466961_0035883 3300044693 Bacteria 3183
132 Ga0453684_0119064 3300044712 Bacteria 3192
133 Ga0495590_0017795 3300046457 Bacteria 2550
134 Ga0495629_0000119 3300046459 Bacteria 69922
135 Ga0495638_0000654 3300046460 Bacteria 37893
136 Ga0495638_0044026 3300046460 Bacteria 2813
137 Ga0495638_0122743 3300046460 Bacteria 1533
138 Ga0495638_0133257 3300046460 Bacteria 1458
139 Ga0495638_0177356 3300046460 Bacteria 1218
140 Ga0495651_0196554 3300046462 Bacteria 1415
141 Ga0495653_0000105 3300046463 Bacteria 69642
142 Ga0495650_0011390 3300046471 Bacteria 4877
143 Ga0495580_0001451 3300046472 Bacteria 20796
144 Ga0495580_0017633 3300046472 Bacteria 5333
145 Ga0495582_0040850 3300046473 Bacteria 2555
146 Ga0495605_0004200 3300046474 Bacteria 8488
147 Ga0495664_0147010 3300046477 Bacteria 1429
148 Ga0495585_0101630 3300046492 Bacteria 1537
149 Ga0495583_0012170 3300046506 Bacteria 4890
150 Ga0495610_0002441 3300046512 Bacteria 15638
151 Ga0495620_0003156 3300046515 Bacteria 9455
152 Ga0495628_0003649 3300046516 Bacteria 13746
153 Ga0495630_0007264 3300046517 Bacteria 7908
154 Ga0495632_0000577 3300046519 Bacteria 34023
155 Ga0495632_0000737 3300046519 Bacteria 29579
156 Ga0495666_0031943 3300046526 Bacteria 2579
157 Ga0495633_0028698 3300046558 Bacteria 2710
158 Ga0495661_0141670 3300046665 Bacteria 1307
159 Ga0495588_0145535 3300046674 Bacteria 1252
160 Ga0495646_0000843 3300046680 Bacteria 17347
161 Ga0495624_0017179 3300046690 Bacteria 4863
162 Ga0495671_0051508 3300046692 Bacteria 2047
163 Ga0495649_0018563 3300046694 Bacteria 3911
164 Ga0495589_0054189 3300046794 Bacteria 1978
165 Ga0495660_0033237 3300046810 Bacteria 2894
166 Ga0495672_0053729 3300047320 Bacteria 2358
167 Ga0495676_0195515 3300047321 Bacteria 1408
168 Ga0495683_0077607 3300047323 Bacteria 1623
169 Ga0495687_003674 3300047443 Bacteria 10923
170 Ga0495687_013534 3300047443 Bacteria 4251
171 Ga0495687_026121 3300047443 Bacteria 2753
172 Ga0495679_000036 3300047446 Bacteria 161473
173 Ga0495593_0004545 3300047673 Bacteria 8243
174 Ga0496100_0002935 3300048903 Bacteria 8766
175 Ga0496101_0020082 3300048904 Bacteria 4568
176 Ga0496101_0052596 3300048904 Bacteria 2937
177 Ga0496102_0004495 3300048905 Bacteria 11774
178 Ga0496102_0286026 3300048905 Bacteria 1554
179 Ga0496103_0009291 3300048906 Bacteria 5825
180 Ga0496104_0213485 3300048907 Bacteria 1841
181 Ga0496107_0225882 3300048910 Bacteria 1393
182 Ga0496109_0246847 3300048912 Bacteria 1681
183 Ga0496116_0020486 3300048919 Bacteria 5020
184 Ga0496117_0001125 3300048920 Bacteria 40300
185 Ga0496117_0008206 3300048920 Bacteria 9960
186 Ga0496117_0031800 3300048920 Bacteria 4023
187 Ga0496118_0000844 3300048921 Bacteria 48654
188 Ga0496118_0061240 3300048921 Bacteria 2788
189 Ga0496119_0010342 3300048922 Bacteria 7857
190 Ga0496119_0026996 3300048922 Bacteria 3963
191 Ga0496120_0001548 3300048923 Bacteria 26898
192 Ga0496120_0015007 3300048923 Bacteria 5129
193 Ga0496121_0008986 3300048924 Bacteria 11587
194 Ga0496121_0017341 3300048924 Bacteria 7364
195 Ga0496122_0015907 3300048925 Bacteria 7161
196 Ga0496122_0024216 3300048925 Bacteria 5318
197 Ga0496123_0006124 3300048926 Bacteria 11794
198 Ga0496123_0010010 3300048926 Bacteria 8447
199 Ga0496124_0071395 3300048927 Bacteria 2878
200 Ga0496124_0079626 3300048927 Bacteria 2697
201 Ga0496124_0085544 3300048927 Bacteria 2584
202 Ga0496124_0183764 3300048927 Bacteria 1606
203 Ga0496124_0296067 3300048927 Bacteria 1171
204 Ga0496125_0000134 3300048928 Bacteria 161449
205 Ga0496125_0023993 3300048928 Bacteria 5619
206 Ga0496126_0106465 3300048929 Bacteria 2447
207 Ga0495678_078462 3300049459 Bacteria 1192
208 Ga0501034_0077238 3300049571 Bacteria 3336
209 Ga0501034_0202414 3300049571 Bacteria 1943
210 Ga0501047_0041499 3300049581 Bacteria 4446
211 Ga0501073_0034837 3300049589 Bacteria 3581
212 Ga0501080_0300332 3300049742 Bacteria 1457
213 Ga0500636_0074073 3300053177 Bacteria 1971
214 Ga0590071_000901 3300059421 Bacteria 8246
215 2510843284 2510461069 Bacteria 5505000
216 2511181740 2510917028 Bacteria 6185411
217 2513598603 2513237088 Bacteria 6927906
218 2513866057 2513237138 Bacteria 7368160
219 2513908922 2513237144 Bacteria 7530820
220 2513925312 2513237146 Bacteria 7166346
221 2535516728 2534681796 Bacteria 7146037
222 2585254965 2582581304 Bacteria 5831370
223 2585281400 2582581308 Bacteria 7413247
224 2585327717 2582581315 Bacteria 7318924
225 2585334439 2582581316 Bacteria 7774528
226 2585404312 2582581867 Bacteria 7184437
227 2585535622 2585427527 Bacteria 7273426
228 2585556017 2585427530 Bacteria 7383882
229 2585821988 2585427590 Bacteria 6824633
230 2599417223 2599185170 Bacteria 7295545
231 2616310512 2615840626 Bacteria 7921970
232 2644004203 2643221599 Bacteria 6292121
233 2644242381 2643221643 Bacteria 5749658
234 2776910474 2775507049 Bacteria 6284736
235 2819641635 2818991453 Bacteria 7181617
236 2838038573 2838035591 Bacteria 7166484
237 2838661505 2838661181 Bacteria 7385261
238 2838679072 2838675328 Bacteria 4909118
239 2838718026 2838714209 Bacteria 5525906
240 2838723371 2838719591 Bacteria 5523910
241 2838728740 2838724970 Bacteria 4908691
242 2839996656 2839993093 Bacteria 5512535
243 2841735387 2841734538 Bacteria 6784580
244 2841851452 2841846520 Bacteria 5345850
245 2842130036 2842124991 Bacteria 5346824
246 2842133777 2842130223 Bacteria 4909145
247 2842155959 2842152218 Bacteria 4908957
248 2842174271 2842170452 Bacteria 5525737
249 2842179391 2842175837 Bacteria 4908771
250 2842190911 2842187318 Bacteria 5524014
251 2842215226 2842211629 Bacteria 5523832
252 2842228135 2842224351 Bacteria 5524473
253 2856320247 2856314179 Bacteria 6477897
254 2856321637 2856320880 Bacteria 7263508
255 2856371565 2856364286 Bacteria 6939991
256 2857357290 2857349434 Bacteria 7926032
257 2869164924 2869162929 Bacteria 6399702
258 2869284511 2869278585 Bacteria 7077053
259 2869289513 2869285874 Bacteria 6901219
260 2871431580 2871429161 Bacteria 6547891
261 2871479734 2871474448 Bacteria 6806570
262 2874154719 2874146452 Bacteria 7533118
263 2874162102 2874155637 Bacteria 6724144
264 2876420286 2876413966 Bacteria 6831344
265 2878042555 2878035449 Bacteria 6555736
266 2878748185 2878745973 Bacteria 6867388
267 2878794592 2878788777 Bacteria 6567085
268 2885345937 2885342637 Bacteria 7011821
269 2885357526 2885350715 Bacteria 6787678
270 2888346408 2888343758 Bacteria 6611049
271 2903505718 2903492973 Bacteria 13473544
272 2906311802 2906308376 Bacteria 6841989
273 2906323541 2906321335 Bacteria 6579571
274 2906420974 2906414383 Bacteria 6580790
275 2909401311 2909399089 Bacteria 3922598
276 2915650577 2915650412 Bacteria 4288180
277 2919118263 2919114240 Bacteria 5700270
278 2920826028 2920822456 Bacteria 6897201
279 2923558396 2923556063 Bacteria 6793593
280 2924762705 2924754689 Bacteria 6774424
281 2926758027 2926754445 Bacteria 5964435
282 2933010984 2933006813 Bacteria 4912075
283 2933023599 2933016740 Bacteria 6355406
284 2937818379 2937813078 Bacteria 7783518
285 2937825550 2937822353 Bacteria 7290551
286 2937842204 2937836603 Bacteria 6811263
287 2937883693 2937877337 Bacteria 7246526
288 2958038939 2958034702 Bacteria 6989922
289 2958043397 2958041894 Bacteria 13082850
290 2958056219 2958041894 Bacteria 13082850
291 2958075617 2958071322 Bacteria 6815895
292 2958090971 2958084443 Bacteria 7312792
293 2958133887 2958130278 Bacteria 6897202
294 2958183533 2958179912 Bacteria 6874908
295 2961081499 2961077736 Bacteria 7079850
296 2965062929 2965062239 Bacteria 7412989
297 2965122859 2965119406 Bacteria 6956431
298 2968092066 2968091066 Bacteria 6052692
299 2970546857 2970540015 Bacteria 6977556
300 2970599127 2970593180 Bacteria 7073582
301 2977850871 2977843712 Bacteria 6753583
302 2977949366 2977942078 Bacteria 7570577
303 2987644680 2987636660 Bacteria 8088555
304 2989354561 2989349275 Bacteria 6349068
305 2989775170 2989771324 Bacteria 5605128
306 2996891906 2996887358 Bacteria 5795980
307 3003935491 3003930520 Bacteria 5667563
308 3004210858 3004203850 Bacteria 7307914
309 3005414490 3005409236 Bacteria 7188837
310 3005457280 3005452660 Bacteria 5889319
311 641335142 641228493 Bacteria 3999591
312 641337685 641228493 Bacteria 3999591
313 643391439 643348555 Bacteria 3914947
314 643392125 643348555 Bacteria 3914947
315 8004391392 8004387939 Bacteria 7049250
316 8004397257 8004395343 Bacteria 6620908
317 8004636792 8004633249 Bacteria 6723080
318 8004716761 8004714634 Bacteria 6776161
319 8005263317 8005258706 Bacteria 6184835
320 8005326433 8005321885 Bacteria 5795980
321 8005545400 8005542996 Bacteria 7077758
322 Ga0500578_0040276
323 JGI25155J39150_1000017
324 JGI25156J39149_1000034
325 JGI25154J39366_1000034
326 JGI25157J39369_1000137
327 Ga0070683_100021191
328 Ga0068869_100010110
329 Ga0068868_100091805
330 Ga0068868_100115613
331 Ga0070689_100246543
332 Ga0070661_100244343
333 Ga0070674_100289737
334 Ga0070667_100314845
335 Ga0068867_100000034
336 Ga0070697_100019902
337 Ga0070697_100036692
338 Ga0070665_100073097
339 Ga0070665_100212990
340 Ga0068855_100000355
341 Ga0068855_100555721
342 Ga0068856_100207232
343 Ga0068859_100086484
344 Ga0068859_100412246
345 Ga0068864_100033420
346 Ga0068861_100107545
347 Ga0068863_100042626
348 Ga0068858_100032310
349 Ga0068860_100107663
350 Ga0068860_100185020
351 Ga0070717_10000010
352 Ga0075365_10000340
353 Ga0075368_10015558
354 Ga0075368_10069125
355 Ga0075367_10042889
356 Ga0075366_10064840
357 Ga0075429_100006181
358 Ga0068865_100281728
359 Ga0097620_100086488
360 Ga0097620_100412235
361 Ga0099826_10001593
362 Ga0105240_10000216
363 Ga0105240_10068706
364 Ga0105245_10319081
365 Ga0105243_10000467
366 Ga0105243_10136448
367 Ga0105242_10078295
368 Ga0105248_10029747
369 Ga0105237_10000536
370 Ga0105239_10116236
371 Ga0105239_10143686
372 Ga0105239_10183329
373 Ga0157370_10000183
374 Ga0157378_10116326
375 Ga0157378_10294044
376 Ga0157375_10175341
377 Ga0157375_10189238
378 Ga0157375_10367780
379 Ga0182008_10033631
380 Ga0157377_10000067
381 Ga0182007_10009370
382 Ga0209435_100023
383 Ga0209646_1000080
384 Ga0209026_1000076
385 Ga0209677_100216
386 Ga0209759_1000059
387 Ga0209233_1000428
388 Ga0209025_1005660
389 Ga0209758_1013670
390 Ga0209051_1001033
391 Ga0209051_1008811
392 Ga0207695_10000319
393 Ga0207695_10108736
394 Ga0207671_10000078
395 Ga0207687_10038899
396 Ga0207690_10239817
397 Ga0207686_10086529
398 Ga0207709_10000648
399 Ga0207669_10267095
400 Ga0207665_10030755
401 Ga0207689_10005264
402 Ga0207667_10003426
403 Ga0207667_10538472
404 Ga0207658_10314488
405 Ga0207677_10085038
406 Ga0207702_10171137
407 Ga0207641_10121483
408 Ga0207641_10174500
409 Ga0207648_10000845
410 Ga0207648_10024338
411 Ga0207676_10156856
412 Ga0207675_100009406
413 Ga0207683_10064549
414 Ga0207698_10607280
415 Ga0209282_1026428
416 Ga0209813_10015552
417 Ga0268266_10213145
418 Ga0268264_10115749
419 Ga0307515_10000017
420 Ga0307515_10000208
421 Ga0307515_10076720
422 Ga0307515_10107770
423 Ga0307515_10132599
424 Ga0265328_10076116
425 Ga0265331_10031405
426 Ga0265327_10000746
427 Ga0307513_10006404
428 Ga0307513_10022587
429 Ga0307508_10117755
430 Ga0265314_10017265
431 Ga0307516_10135908
432 Ga0307413_10057308
433 Ga0307409_100091187
434 Ga0307415_100126751
435 Ga0307415_100127434
436 Ga0395899_0000595
437 Ga0395899_0003974
438 Ga0395899_0261821
439 Ga0395900_0017637
440 Ga0395900_0023296
441 Ga0395900_0369992
442 Ga0395898_0048558
443 Ga0395905_0006360
444 Ga0395905_0032180
445 Ga0395905_0045693
446 Ga0395905_0132611
447 Ga0395901_0003325
448 Ga0395901_0160571
449 Ga0436361_1104292
450 Ga0451807_0223401
451 Ga0466972_0001140
452 Ga0466961_0035883
453 Ga0453684_0119064
454 Ga0495590_0017795
455 Ga0495629_0000119
456 Ga0495638_0000654
457 Ga0495638_0044026
458 Ga0495638_0122743
459 Ga0495638_0133257
460 Ga0495638_0177356
461 Ga0495651_0196554
462 Ga0495653_0000105
463 Ga0495650_0011390
464 Ga0495580_0001451
465 Ga0495580_0017633
466 Ga0495582_0040850
467 Ga0495605_0004200
468 Ga0495664_0147010
469 Ga0495585_0101630
470 Ga0495583_0012170
471 Ga0495610_0002441
472 Ga0495620_0003156
473 Ga0495628_0003649
474 Ga0495630_0007264
475 Ga0495632_0000577
476 Ga0495632_0000737
477 Ga0495666_0031943
478 Ga0495633_0028698
479 Ga0495661_0141670
480 Ga0495588_0145535
481 Ga0495646_0000843
482 Ga0495624_0017179
483 Ga0495671_0051508
484 Ga0495649_0018563
485 Ga0495589_0054189
486 Ga0495660_0033237
487 Ga0495672_0053729
488 Ga0495676_0195515
489 Ga0495683_0077607
490 Ga0495687_003674
491 Ga0495687_013534
492 Ga0495687_026121
493 Ga0495679_000036
494 Ga0495593_0004545
495 Ga0496100_0002935
496 Ga0496101_0020082
497 Ga0496101_0052596
498 Ga0496102_0004495
499 Ga0496102_0286026
500 Ga0496103_0009291
501 Ga0496104_0213485
502 Ga0496107_0225882
503 Ga0496109_0246847
504 Ga0496116_0020486
505 Ga0496117_0001125
506 Ga0496117_0008206
507 Ga0496117_0031800
508 Ga0496118_0000844
509 Ga0496118_0061240
510 Ga0496119_0010342
511 Ga0496119_0026996
512 Ga0496120_0001548
513 Ga0496120_0015007
514 Ga0496121_0008986
515 Ga0496121_0017341
516 Ga0496122_0015907
517 Ga0496122_0024216
518 Ga0496123_0006124
519 Ga0496123_0010010
520 Ga0496124_0071395
521 Ga0496124_0079626
522 Ga0496124_0085544
523 Ga0496124_0183764
524 Ga0496124_0296067
525 Ga0496125_0000134
526 Ga0496125_0023993
527 Ga0496126_0106465
528 Ga0495678_078462
529 Ga0501034_0077238
530 Ga0501034_0202414
531 Ga0501047_0041499
532 Ga0501073_0034837
533 Ga0501080_0300332
534 Ga0500636_0074073
535 Ga0590071_000901
536 2510843284
537 2511181740
538 2513598603
539 2513866057
540 2513908922
541 2513925312
542 2535516728
543 2585254965
544 2585281400
545 2585327717
546 2585334439
547 2585404312
548 2585535622
549 2585556017
550 2585821988
551 2599417223
552 2616310512
553 2644004203
554 2644242381
555 2776910474
556 2819641635
557 2838038573
558 2838661505
559 2838679072
560 2838718026
561 2838723371
562 2838728740
563 2839996656
564 2841735387
565 2841851452
566 2842130036
567 2842133777
568 2842155959
569 2842174271
570 2842179391
571 2842190911
572 2842215226
573 2842228135
574 2856320247
575 2856321637
576 2856371565
577 2857357290
578 2869164924
579 2869284511
580 2869289513
581 2871431580
582 2871479734
583 2874154719
584 2874162102
585 2876420286
586 2878042555
587 2878748185
588 2878794592
589 2885345937
590 2885357526
591 2888346408
592 2903505718
593 2906311802
594 2906323541
595 2906420974
596 2909401311
597 2915650577
598 2919118263
599 2920826028
600 2923558396
601 2924762705
602 2926758027
603 2933010984
604 2933023599
605 2937818379
606 2937825550
607 2937842204
608 2937883693
609 2958038939
610 2958043397
611 2958056219
612 2958075617
613 2958090971
614 2958133887
615 2958183533
616 2961081499
617 2965062929
618 2965122859
619 2968092066
620 2970546857
621 2970599127
622 2977850871
623 2977949366
624 2987644680
625 2989354561
626 2989775170
627 2996891906
628 3003935491
629 3004210858
630 3005414490
631 3005457280
632 641335142
633 641337685
634 643391439
635 643392125
636 8004391392
637 8004397257
638 8004636792
639 8004716761
640 8005263317
641 8005326433
642 8005545400

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

43

163

0.96

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

171

293

0.95

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

175

371

0.78

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

44

162

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.9516 4 315
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.9397 4 315
4koa-assembly1.cif.gz_A-2 crystal structure analysis of 1,5-anhydro-d-fructose reductase from sinorhizobium meliloti 0.914 2 315
4koa-assembly1.cif.gz_A-2 crystal structure analysis of 1,5-anhydro-d-fructose reductase from sinorhizobium meliloti 0.9083 2 315
1h6d-assembly3.cif.gz_I oxidized precursor form of glucose-fructose oxidoreductase from zymomonas mobilis complexed with glycerol 0.8818 3 310
ID Description Score Start End Superfamily
2glxC02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9746 107 315 3.30.360.10
af_D3ZR63_4_130_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9678 4 91 3.40.50.720
2glxC02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9611 107 315 3.30.360.10
af_B1WBV3_5_113_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9531 4 95 3.40.50.720
5a02A02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9001 112 310 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A530QYW9-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9721 137 315 GO:0005737
GO:0006740
GO:0016491
AF-A0A529UBI2-F1-model_v4 deleted 0.964 159 315
AF-A0A0N8PR27-F1-model_v4 Oxidoreductase 0.961 3 95 GO:0000166
AF-A0A2K5SFW0-F1-model_v4 Glucose-fructose oxidoreductase domain-containing protein 2 0.9609 1 88 GO:0000166
GO:0005576
GO:0030198
GO:0031012
AF-A0A7X6J9T0-F1-model_v4 1,5-anhydro-D-fructose reductase 0.9558 188 315

Map