F406352

General Info

Members Datasets Scaffolds Average Seq Length
322 204 644 656

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100048319|Ga0070697_1000483192
Length 709
Sequence VDEPLAEIVPDTQPVSSHAINQLFEPIPPSPIRDLWVAPETAPKPPVSLARVTGPSHRASAYYSAPIDLFLATDPQHVLGALAAAHTHDLEIDQRQAWEEEIDILKGGLTGIAGRIYLEFDVPRLGSRIDVVLVSGPVVFPIEFKCGERQFRLADYNQAWDYALDLKNFHAASHDVPLLPILVATQAEVADDAWQTAYSDGVRPPYRCGARRLRSVIEAGLAQSSGPVIDGEAWGAAPYQPTPTIIEAARALYARHSVEAISRSDAGAKNLRVTSSGVEEIIERSRANREKSIVFVTGVPGAGKTLVGLNVATRRRTLGESRAVYLSGNGPLVAVLQEALTRDELARIGKTERKGAVRQRVKPFIQNVHHFRDEGVRTTSAPYDHVVIFDEAQRAWTQAKTADFMKRRKKIANFNRSEPEFLISYLDRHDGWAVVVCLVGGGQEIHTGEAGIGEWLEAIRLQFSHWRVYVSPNLTDSEYAAQSRLEHVSAVTSIVWDDRLHLATSMRSFRSEKVSTFVKAVLDCDVVSAQTLLREVMRRYPVVVTRDLARAKDWIRGHARGSERYGLVASSQAQRLKPHAIDVRVNVDPVQWFLNDRHDTRSSYYLEDAATEFQVQGLELDWVCVTWDADLRRHAESWRYQSFRGDAWTTIHKEDRKRYLLNAYRVLLTRARQGMVIFVPRGEESDPTRAPAFYDDTYEYLTSLGVAEI

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
109 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
118 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
125 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
158 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
159 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
160 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
161 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
162 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
165 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
166 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
183 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
186 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
187 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
188 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
189 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
193 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
194 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
195 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
196 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
197 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
198 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
199 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
200 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
201 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
202 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
203 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
204 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 0
Isolates 3.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.66
Nodule 0.62
Rhizoplane 0
Rhizosphere 91.3
Stem 0
Stem Tuber 0
Unclassified 6.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100048319 3300005536 Bacteria 3450
2 JGI24736J21556_1001326 3300001904 Bacteria 4525
3 JGI25406J46586_10000279 3300003203 Bacteria 22779
4 JGI25406J46586_10003869 3300003203 Bacteria 6997
5 JGI25153J46596_10000269 3300003215 Bacteria 41135
6 rootH1_10099408 3300003323 Bacteria 3202
7 Ga0055531_10000775 3300003794 Bacteria 26585
8 Ga0065714_10064432 3300005288 Bacteria 133542
9 Ga0065714_10065734 3300005288 Bacteria 8673
10 Ga0065712_10067730 3300005290 Bacteria 133482
11 Ga0065715_10001797 3300005293 Bacteria 7344
12 Ga0065715_10089968 3300005293 Bacteria 7992
13 Ga0070658_10003330 3300005327 Bacteria 13265
14 Ga0070658_10003900 3300005327 Bacteria 12225
15 Ga0070658_10026003 3300005327 Bacteria 4695
16 Ga0070683_100159366 3300005329 Unclassified 2141
17 Ga0070670_100023899 3300005331 Bacteria 5259
18 Ga0070680_100022359 3300005336 Bacteria 5037
19 Ga0070660_100013368 3300005339 Bacteria 5887
20 Ga0070689_100000342 3300005340 Bacteria 27296
21 Ga0070675_100071582 3300005354 Bacteria 2877
22 Ga0070713_100046977 3300005436 Bacteria 3546
23 Ga0070708_100036992 3300005445 Bacteria 4256
24 Ga0070681_10020259 3300005458 Bacteria 6668
25 Ga0070685_10028046 3300005466 Bacteria 3117
26 Ga0070707_100032503 3300005468 Bacteria 4972
27 Ga0070698_100033538 3300005471 Bacteria 5317
28 Ga0070698_100067415 3300005471 Bacteria 3599
29 Ga0070679_100007582 3300005530 Bacteria 10152
30 Ga0070679_100047873 3300005530 Bacteria 4260
31 Ga0070697_100001203 3300005536 Bacteria 19553
32 Ga0070697_100028077 3300005536 Bacteria 4505
33 Ga0068853_100055337 3300005539 Bacteria 3420
34 Ga0068853_100080802 3300005539 Unclassified 2845
35 Ga0070672_100027268 3300005543 Bacteria 4260
36 Ga0070686_100012244 3300005544 Bacteria 4878
37 Ga0068855_100179095 3300005563 Unclassified 2397
38 Ga0068856_100008145 3300005614 Bacteria 10224
39 Ga0070702_100003805 3300005615 Bacteria 6820
40 Ga0068852_100045565 3300005616 Bacteria 3731
41 Ga0068859_100031834 3300005617 Bacteria 5298
42 Ga0068864_100036446 3300005618 Bacteria 4193
43 Ga0068864_100052790 3300005618 Bacteria 3505
44 Ga0068863_100065595 3300005841 Bacteria 3435
45 Ga0068862_100028920 3300005844 Bacteria 4668
46 Ga0081539_10000019 3300005985 Bacteria 369381
47 Ga0081539_10000581 3300005985 Bacteria 75203
48 Ga0070716_100055287 3300006173 Bacteria 2271
49 Ga0097621_100076088 3300006237 Bacteria 2784
50 Ga0068871_100024377 3300006358 Bacteria 4691
51 Ga0068871_100091614 3300006358 Bacteria 2534
52 Ga0075428_100000328 3300006844 Bacteria 47184
53 Ga0075431_100040814 3300006847 Bacteria 4783
54 Ga0075431_100112155 3300006847 Bacteria 2814
55 Ga0075434_100050008 3300006871 Bacteria 4152
56 Ga0075434_100151460 3300006871 Unclassified 2339
57 Ga0075429_100016983 3300006880 Bacteria 6294
58 Ga0068865_100000070 3300006881 Bacteria 53670
59 Ga0097620_100031836 3300006931 Bacteria 5298
60 Ga0075435_100035659 3300007076 Bacteria 3948
61 Ga0105244_10024561 3300009036 Bacteria 3287
62 Ga0111539_10000020 3300009094 Bacteria 265282
63 Ga0114129_10005060 3300009147 Bacteria 18552
64 Ga0114129_10051253 3300009147 Bacteria 5795
65 Ga0114129_10116943 3300009147 Bacteria 3674
66 Ga0114129_10155217 3300009147 Unclassified 3131
67 Ga0114129_10217541 3300009147 Bacteria 2579
68 Ga0105243_10000124 3300009148 Bacteria 87031
69 Ga0105242_10000021 3300009176 Bacteria 115541
70 Ga0105242_10002507 3300009176 Bacteria 14401
71 Ga0105248_10029185 3300009177 Bacteria 6151
72 Ga0105248_10032772 3300009177 Bacteria 5804
73 Ga0105248_10073894 3300009177 Bacteria 3832
74 Ga0105248_10148658 3300009177 Unclassified 2643
75 Ga0105248_10195519 3300009177 Bacteria 2279
76 Ga0105249_10052849 3300009553 Unclassified 3712
77 Ga0105249_10076572 3300009553 Bacteria 3101
78 Ga0105239_10005707 3300010375 Bacteria 14532
79 Ga0105239_10022590 3300010375 Bacteria 6935
80 Ga0105246_10042970 3300011119 Bacteria 3064
81 Ga0157373_10000055 3300013100 Bacteria 103203
82 Ga0157371_10004310 3300013102 Bacteria 12478
83 Ga0157371_10014011 3300013102 Bacteria 6070
84 Ga0157370_10039657 3300013104 Bacteria 4551
85 Ga0157369_10009486 3300013105 Bacteria 11127
86 Ga0157374_10014063 3300013296 Bacteria 6997
87 Ga0157374_10016559 3300013296 Bacteria 6483
88 Ga0157378_10009853 3300013297 Bacteria 8329
89 Ga0157378_10024357 3300013297 Bacteria 5324
90 Ga0163162_10039088 3300013306 Bacteria 4739
91 Ga0163162_10121652 3300013306 Bacteria 2715
92 Ga0163162_10128715 3300013306 Bacteria 2640
93 Ga0163163_10076710 3300014325 Bacteria 3337
94 Ga0163163_10101353 3300014325 Plasmid 2902
95 Ga0157376_10028368 3300014969 Bacteria 4448
96 Ga0183365_10001 3300015684 Bacteria 2090444
97 Ga0163161_10000303 3300017792 Bacteria 42868
98 Ga0209758_1000008 3300025297 Bacteria 1215263
99 Ga0209051_1000241 3300025303 Bacteria 91816
100 Ga0209257_1000015 3300025304 Bacteria 908141
101 Ga0207647_10000400 3300025904 Bacteria 35551
102 Ga0207705_10002028 3300025909 Bacteria 15766
103 Ga0207705_10002673 3300025909 Bacteria 13656
104 Ga0207705_10019479 3300025909 Bacteria 4853
105 Ga0207684_10120129 3300025910 Unclassified 2253
106 Ga0207707_10068201 3300025912 Bacteria 3099
107 Ga0207695_10094967 3300025913 Bacteria 2987
108 Ga0207660_10025830 3300025917 Bacteria 3993
109 Ga0207657_10000767 3300025919 Bacteria 34034
110 Ga0207694_10058354 3300025924 Bacteria 3002
111 Ga0207694_10065690 3300025924 Bacteria 2829
112 Ga0207650_10005667 3300025925 Bacteria 8525
113 Ga0207644_10049854 3300025931 Unclassified 2999
114 Ga0207686_10000003 3300025934 Bacteria 376934
115 Ga0207686_10000175 3300025934 Bacteria 49208
116 Ga0207709_10000017 3300025935 Bacteria 470753
117 Ga0207670_10000693 3300025936 Bacteria 17801
118 Ga0207704_10000342 3300025938 Bacteria 21647
119 Ga0207691_10015979 3300025940 Bacteria 7131
120 Ga0207711_10015169 3300025941 Bacteria 6399
121 Ga0207711_10031065 3300025941 Bacteria 4507
122 Ga0207711_10039902 3300025941 Bacteria 3994
123 Ga0207661_10131113 3300025944 Unclassified 2147
124 Ga0207667_10155644 3300025949 Unclassified 2352
125 Ga0207712_10045651 3300025961 Unclassified 3035
126 Ga0207639_10005070 3300026041 Bacteria 8875
127 Ga0207702_10029418 3300026078 Bacteria 4570
128 Ga0207641_10003980 3300026088 Bacteria 12895
129 Ga0207641_10041129 3300026088 Bacteria 3873
130 Ga0207676_10020352 3300026095 Bacteria 4855
131 Ga0207676_10021325 3300026095 Bacteria 4753
132 Ga0207698_10045085 3300026142 Bacteria 3319
133 Ga0207428_10000051 3300027907 Bacteria 176522
134 Ga0265337_1000018 3300028556 Bacteria 76481
135 Ga0265337_1004978 3300028556 Bacteria 5398
136 Ga0265338_10001269 3300028800 Bacteria 41609
137 Ga0265338_10005840 3300028800 Bacteria 15888
138 Ga0265327_10006104 3300031251 Bacteria 9765
139 Ga0265316_10002265 3300031344 Bacteria 20164
140 Ga0265316_10048305 3300031344 Bacteria 3361
141 Ga0307408_100011741 3300031548 Bacteria 5792
142 Ga0265342_10000118 3300031712 Bacteria 87684
143 Ga0307405_10000004 3300031731 Bacteria 444977
144 Ga0307405_10013726 3300031731 Bacteria 4329
145 Ga0307405_10023143 3300031731 Bacteria 3526
146 Ga0307413_10017111 3300031824 Bacteria 3769
147 Ga0307413_10056975 3300031824 Bacteria 2387
148 Ga0307410_10000276 3300031852 Bacteria 19814
149 Ga0307406_10007492 3300031901 Bacteria 6054
150 Ga0307412_10000365 3300031911 Bacteria 28116
151 Ga0307416_100001824 3300032002 Bacteria 11850
152 Ga0307414_10009529 3300032004 Bacteria 5585
153 Ga0307415_100011209 3300032126 Bacteria 5118
154 Ga0373932_0000086 3300035112 Bacteria 24375
155 Ga0373954_0001924 3300035118 Bacteria 8597
156 Ga0373927_0001699 3300035695 Bacteria 16447
157 Ga0373937_0004600 3300036401 Bacteria 11706
158 Ga0395899_0006877 3300037312 Bacteria 8812
159 Ga0395899_0030774 3300037312 Bacteria 4036
160 Ga0395900_0003656 3300037418 Bacteria 16534
161 Ga0395900_0003676 3300037418 Bacteria 16489
162 Ga0395900_0043361 3300037418 Bacteria 4637
163 Ga0395898_0003461 3300037466 Bacteria 17640
164 Ga0395905_0000097 3300037471 Bacteria 145600
165 Ga0395901_0005004 3300038443 Bacteria 13382
166 Ga0395901_0102682 3300038443 Bacteria 3001
167 Ga0400483_048134 3300039062 Bacteria 2372
168 Ga0439447_004121 3300041407 Bacteria 5059
169 Ga0451577_0000482 3300042876 Bacteria 67427
170 Ga0451577_0001420 3300042876 Bacteria 31947
171 Ga0451577_0005846 3300042876 Bacteria 12449
172 Ga0451577_0006538 3300042876 Bacteria 11596
173 Ga0451577_0008332 3300042876 Bacteria 10086
174 Ga0451577_0058767 3300042876 Unclassified 3428
175 Ga0453683_0000302 3300044673 Bacteria 62266
176 Ga0453683_0000981 3300044673 Bacteria 26941
177 Ga0453683_0026782 3300044673 Bacteria 3660
178 Ga0453683_0031127 3300044673 Bacteria 3371
179 Ga0453683_0032098 3300044673 Bacteria 3315
180 Ga0453683_0043311 3300044673 Unclassified 2824
181 Ga0453684_0000011 3300044712 Bacteria 1108399
182 Ga0453684_0000023 3300044712 Bacteria 857153
183 Ga0453684_0000162 3300044712 Bacteria 298154
184 Ga0453684_0000284 3300044712 Bacteria 218640
185 Ga0453684_0000726 3300044712 Bacteria 116252
186 Ga0453684_0001584 3300044712 Bacteria 62821
187 Ga0453684_0009302 3300044712 Bacteria 17244
188 Ga0453684_0013877 3300044712 Bacteria 12997
189 Ga0453684_0015948 3300044712 Bacteria 11813
190 Ga0453684_0017669 3300044712 Bacteria 11026
191 Ga0453684_0023301 3300044712 Bacteria 9131
192 Ga0453684_0028084 3300044712 Bacteria 8043
193 Ga0453684_0032992 3300044712 Bacteria 7228
194 Ga0453684_0039371 3300044712 Bacteria 6443
195 Ga0453684_0050124 3300044712 Bacteria 5495
196 Ga0453684_0061050 3300044712 Bacteria 4842
197 Ga0453684_0104223 3300044712 Bacteria 3463
198 Ga0453684_0120697 3300044712 Bacteria 3165
199 Ga0453684_0183022 3300044712 Bacteria 2458
200 Ga0451576_0000009 3300045051 Bacteria 712666
201 Ga0451576_0000016 3300045051 Bacteria 565050
202 Ga0451576_0000755 3300045051 Bacteria 64384
203 Ga0451576_0002096 3300045051 Bacteria 31090
204 Ga0451576_0004146 3300045051 Bacteria 19081
205 Ga0451576_0011603 3300045051 Bacteria 9985
206 Ga0451576_0132287 3300045051 Bacteria 2601
207 Ga0495580_0001966 3300046472 Bacteria 18049
208 Ga0495580_0005116 3300046472 Bacteria 10913
209 Ga0495580_0035355 3300046472 Bacteria 3593
210 Ga0495605_0021093 3300046474 Bacteria 3455
211 Ga0495584_0012346 3300046491 Bacteria 4360
212 Ga0495585_0013408 3300046492 Bacteria 4798
213 Ga0495596_0003794 3300046500 Bacteria 7541
214 Ga0495663_0000111 3300046525 Bacteria 34099
215 Ga0495665_0023862 3300046531 Bacteria 3286
216 Ga0495586_0004803 3300046535 Bacteria 7224
217 Ga0495622_0014921 3300046557 Bacteria 3612
218 Ga0495625_0028497 3300046660 Bacteria 4188
219 Ga0495604_0030134 3300047317 Bacteria 4312
220 Ga0495636_0000070 3300047318 Bacteria 43359
221 Ga0495675_0040615 3300047444 Bacteria 2964
222 Ga0495686_0001712 3300047472 Bacteria 22646
223 Ga0496121_0042575 3300048924 Unclassified 3946
224 Ga0501034_0001617 3300049571 Bacteria 29242
225 Ga0501034_0012176 3300049571 Bacteria 8895
226 Ga0501034_0065436 3300049571 Bacteria 3648
227 Ga0501036_0003562 3300049572 Bacteria 12450
228 Ga0501036_0012394 3300049572 Bacteria 7063
229 Ga0501037_0073695 3300049573 Bacteria 2482
230 Ga0501037_0098022 3300049573 Bacteria 2118
231 Ga0501038_0046633 3300049574 Bacteria 3757
232 Ga0501039_0004825 3300049575 Bacteria 10210
233 Ga0501039_0084178 3300049575 Bacteria 2477
234 Ga0501040_0000792 3300049576 Bacteria 19699
235 Ga0501040_0043403 3300049576 Bacteria 3065
236 Ga0501041_0045206 3300049577 Bacteria 2676
237 Ga0501042_0019137 3300049578 Bacteria 4751
238 Ga0501043_0005215 3300049579 Bacteria 10518
239 Ga0501043_0069032 3300049579 Bacteria 2776
240 Ga0501047_0000835 3300049581 Bacteria 31796
241 Ga0501048_0008721 3300049582 Bacteria 7645
242 Ga0501048_0022788 3300049582 Unclassified 4579
243 Ga0501048_0027000 3300049582 Bacteria 4177
244 Ga0501067_0006280 3300049583 Bacteria 6593
245 Ga0501069_0002791 3300049585 Bacteria 8929
246 Ga0501071_0036133 3300049587 Bacteria 3523
247 Ga0501071_0069214 3300049587 Bacteria 2569
248 Ga0501072_0004875 3300049588 Bacteria 10208
249 Ga0501072_0011873 3300049588 Bacteria 6653
250 Ga0501072_0033754 3300049588 Unclassified 4010
251 Ga0501073_0012976 3300049589 Bacteria 6073
252 Ga0501075_0000071 3300049591 Bacteria 44787
253 Ga0501075_0009056 3300049591 Bacteria 6950
254 Ga0501075_0017790 3300049591 Bacteria 5133
255 Ga0501076_0000032 3300049592 Bacteria 70506
256 Ga0501076_0003408 3300049592 Bacteria 11159
257 Ga0501076_0038806 3300049592 Bacteria 3739
258 Ga0501077_0031090 3300049593 Bacteria 3396
259 Ga0501207_000315 3300049654 Bacteria 5189
260 Ga0501216_000508 3300049660 Bacteria 4631
261 Ga0501217_001099 3300049661 Bacteria 4930
262 Ga0501223_001167 3300049663 Bacteria 6191
263 Ga0501227_001365 3300049665 Bacteria 5483
264 Ga0501233_000681 3300049668 Bacteria 5597
265 Ga0501249_001137 3300049679 Bacteria 5606
266 Ga0501257_006780 3300049686 Bacteria 2547
267 Ga0501225_0001743 3300049705 Bacteria 6819
268 Ga0501234_000385 3300049707 Bacteria 6553
269 Ga0501079_0011261 3300049741 Bacteria 6823
270 Ga0501079_0044643 3300049741 Bacteria 3420
271 Ga0501080_0129701 3300049742 Bacteria 2334
272 Ga0501081_0003473 3300049743 Bacteria 10068
273 Ga0501081_0004376 3300049743 Bacteria 9054
274 Ga0501081_0066965 3300049743 Unclassified 2498
275 Ga0501083_0033686 3300049744 Bacteria 3506
276 Ga0501280_002820 3300049776 Bacteria 2798
277 Ga0501035_0126633 3300049822 Bacteria 2229
278 Ga0501045_0001144 3300049824 Bacteria 17569
279 Ga0501045_0004123 3300049824 Bacteria 10038
280 Ga0501226_000661 3300049853 Bacteria 4675
281 nmdc:mga05p37_101165_c1 3300050507 Bacteria 3550
282 nmdc:mga05p37_179110_c1 3300050507 Unclassified 2580
283 nmdc:mga05p37_2035_c1 3300050507 Bacteria 23580
284 nmdc:mga05p37_224397_c1 3300050507 Bacteria 2266
285 nmdc:mga05p37_66049_c1 3300050507 Bacteria 4451
286 nmdc:mga09592_11763_c1 3300050508 Bacteria 7115
287 nmdc:mga06r32_43644_c1 3300050510 Bacteria 4267
288 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
289 nmdc:mga0n895_130295_c1 3300050512 Unclassified 2540
290 nmdc:mga0n895_43641_c1 3300050512 Bacteria 4370
291 nmdc:mga0rr50_62097_c1 3300050513 Bacteria 2817
292 nmdc:mga08x19_4305_c1 3300050514 Bacteria 8434
293 Ga0500635_0000383 3300053080 Bacteria 13699
294 Ga0500583_0000553 3300053092 Bacteria 11343
295 Ga0500641_0000004 3300053096 Bacteria 263911
296 Ga0500641_0000057 3300053096 Bacteria 48444
297 Ga0500608_000109 3300053122 Bacteria 33750
298 Ga0500658_0000001 3300053134 Bacteria 592738
299 Ga0500568_0001968 3300053139 Bacteria 12554
300 Ga0500568_0020451 3300053139 Viruses 2861
301 Ga0500573_0002127 3300053140 Bacteria 9767
302 Ga0500589_010440 3300053147 Bacteria 3973
303 Ga0501084_0000968 3300054114 Bacteria 22250
304 Ga0501084_0020940 3300054114 Bacteria 5453
305 Ga0501084_0033178 3300054114 Bacteria 4318
306 Ga0501082_0003432 3300060353 Bacteria 13832
307 Ga0501082_0006521 3300060353 Bacteria 10119
308 Ga0501082_0019845 3300060353 Bacteria 5796
309 Ga0530510_0000003 3300061734 Bacteria 268332
310 Ga0530510_0003470 3300061734 Bacteria 10835
311 2524001473 2523533628 Bacteria 4098242
312 2644028921 2643221603 Bacteria 6147767
313 2687234889 2684623219 Bacteria 8442773
314 2739793646 2739367756 Bacteria 4553612
315 2740000084 2739367857 Bacteria 5433684
316 2740004900 2739367858 Bacteria 5432813
317 2882457522 2882456835 Bacteria 6863978
318 2883579492 2883577096 Bacteria 4709178
319 2904423642 2904419702 Bacteria 5166287
320 2941546867 2941538514 Bacteria 9402094
321 2967747150 2967742019 Bacteria 6794534
322 8033234249 8033232454 Bacteria 3202805
323 Ga0070697_100048319
324 JGI24736J21556_1001326
325 JGI25406J46586_10000279
326 JGI25406J46586_10003869
327 JGI25153J46596_10000269
328 rootH1_10099408
329 Ga0055531_10000775
330 Ga0065714_10064432
331 Ga0065714_10065734
332 Ga0065712_10067730
333 Ga0065715_10001797
334 Ga0065715_10089968
335 Ga0070658_10003330
336 Ga0070658_10003900
337 Ga0070658_10026003
338 Ga0070683_100159366
339 Ga0070670_100023899
340 Ga0070680_100022359
341 Ga0070660_100013368
342 Ga0070689_100000342
343 Ga0070675_100071582
344 Ga0070713_100046977
345 Ga0070708_100036992
346 Ga0070681_10020259
347 Ga0070685_10028046
348 Ga0070707_100032503
349 Ga0070698_100033538
350 Ga0070698_100067415
351 Ga0070679_100007582
352 Ga0070679_100047873
353 Ga0070697_100001203
354 Ga0070697_100028077
355 Ga0068853_100055337
356 Ga0068853_100080802
357 Ga0070672_100027268
358 Ga0070686_100012244
359 Ga0068855_100179095
360 Ga0068856_100008145
361 Ga0070702_100003805
362 Ga0068852_100045565
363 Ga0068859_100031834
364 Ga0068864_100036446
365 Ga0068864_100052790
366 Ga0068863_100065595
367 Ga0068862_100028920
368 Ga0081539_10000019
369 Ga0081539_10000581
370 Ga0070716_100055287
371 Ga0097621_100076088
372 Ga0068871_100024377
373 Ga0068871_100091614
374 Ga0075428_100000328
375 Ga0075431_100040814
376 Ga0075431_100112155
377 Ga0075434_100050008
378 Ga0075434_100151460
379 Ga0075429_100016983
380 Ga0068865_100000070
381 Ga0097620_100031836
382 Ga0075435_100035659
383 Ga0105244_10024561
384 Ga0111539_10000020
385 Ga0114129_10005060
386 Ga0114129_10051253
387 Ga0114129_10116943
388 Ga0114129_10155217
389 Ga0114129_10217541
390 Ga0105243_10000124
391 Ga0105242_10000021
392 Ga0105242_10002507
393 Ga0105248_10029185
394 Ga0105248_10032772
395 Ga0105248_10073894
396 Ga0105248_10148658
397 Ga0105248_10195519
398 Ga0105249_10052849
399 Ga0105249_10076572
400 Ga0105239_10005707
401 Ga0105239_10022590
402 Ga0105246_10042970
403 Ga0157373_10000055
404 Ga0157371_10004310
405 Ga0157371_10014011
406 Ga0157370_10039657
407 Ga0157369_10009486
408 Ga0157374_10014063
409 Ga0157374_10016559
410 Ga0157378_10009853
411 Ga0157378_10024357
412 Ga0163162_10039088
413 Ga0163162_10121652
414 Ga0163162_10128715
415 Ga0163163_10076710
416 Ga0163163_10101353
417 Ga0157376_10028368
418 Ga0183365_10001
419 Ga0163161_10000303
420 Ga0209758_1000008
421 Ga0209051_1000241
422 Ga0209257_1000015
423 Ga0207647_10000400
424 Ga0207705_10002028
425 Ga0207705_10002673
426 Ga0207705_10019479
427 Ga0207684_10120129
428 Ga0207707_10068201
429 Ga0207695_10094967
430 Ga0207660_10025830
431 Ga0207657_10000767
432 Ga0207694_10058354
433 Ga0207694_10065690
434 Ga0207650_10005667
435 Ga0207644_10049854
436 Ga0207686_10000003
437 Ga0207686_10000175
438 Ga0207709_10000017
439 Ga0207670_10000693
440 Ga0207704_10000342
441 Ga0207691_10015979
442 Ga0207711_10015169
443 Ga0207711_10031065
444 Ga0207711_10039902
445 Ga0207661_10131113
446 Ga0207667_10155644
447 Ga0207712_10045651
448 Ga0207639_10005070
449 Ga0207702_10029418
450 Ga0207641_10003980
451 Ga0207641_10041129
452 Ga0207676_10020352
453 Ga0207676_10021325
454 Ga0207698_10045085
455 Ga0207428_10000051
456 Ga0265337_1000018
457 Ga0265337_1004978
458 Ga0265338_10001269
459 Ga0265338_10005840
460 Ga0265327_10006104
461 Ga0265316_10002265
462 Ga0265316_10048305
463 Ga0307408_100011741
464 Ga0265342_10000118
465 Ga0307405_10000004
466 Ga0307405_10013726
467 Ga0307405_10023143
468 Ga0307413_10017111
469 Ga0307413_10056975
470 Ga0307410_10000276
471 Ga0307406_10007492
472 Ga0307412_10000365
473 Ga0307416_100001824
474 Ga0307414_10009529
475 Ga0307415_100011209
476 Ga0373932_0000086
477 Ga0373954_0001924
478 Ga0373927_0001699
479 Ga0373937_0004600
480 Ga0395899_0006877
481 Ga0395899_0030774
482 Ga0395900_0003656
483 Ga0395900_0003676
484 Ga0395900_0043361
485 Ga0395898_0003461
486 Ga0395905_0000097
487 Ga0395901_0005004
488 Ga0395901_0102682
489 Ga0400483_048134
490 Ga0439447_004121
491 Ga0451577_0000482
492 Ga0451577_0001420
493 Ga0451577_0005846
494 Ga0451577_0006538
495 Ga0451577_0008332
496 Ga0451577_0058767
497 Ga0453683_0000302
498 Ga0453683_0000981
499 Ga0453683_0026782
500 Ga0453683_0031127
501 Ga0453683_0032098
502 Ga0453683_0043311
503 Ga0453684_0000011
504 Ga0453684_0000023
505 Ga0453684_0000162
506 Ga0453684_0000284
507 Ga0453684_0000726
508 Ga0453684_0001584
509 Ga0453684_0009302
510 Ga0453684_0013877
511 Ga0453684_0015948
512 Ga0453684_0017669
513 Ga0453684_0023301
514 Ga0453684_0028084
515 Ga0453684_0032992
516 Ga0453684_0039371
517 Ga0453684_0050124
518 Ga0453684_0061050
519 Ga0453684_0104223
520 Ga0453684_0120697
521 Ga0453684_0183022
522 Ga0451576_0000009
523 Ga0451576_0000016
524 Ga0451576_0000755
525 Ga0451576_0002096
526 Ga0451576_0004146
527 Ga0451576_0011603
528 Ga0451576_0132287
529 Ga0495580_0001966
530 Ga0495580_0005116
531 Ga0495580_0035355
532 Ga0495605_0021093
533 Ga0495584_0012346
534 Ga0495585_0013408
535 Ga0495596_0003794
536 Ga0495663_0000111
537 Ga0495665_0023862
538 Ga0495586_0004803
539 Ga0495622_0014921
540 Ga0495625_0028497
541 Ga0495604_0030134
542 Ga0495636_0000070
543 Ga0495675_0040615
544 Ga0495686_0001712
545 Ga0496121_0042575
546 Ga0501034_0001617
547 Ga0501034_0012176
548 Ga0501034_0065436
549 Ga0501036_0003562
550 Ga0501036_0012394
551 Ga0501037_0073695
552 Ga0501037_0098022
553 Ga0501038_0046633
554 Ga0501039_0004825
555 Ga0501039_0084178
556 Ga0501040_0000792
557 Ga0501040_0043403
558 Ga0501041_0045206
559 Ga0501042_0019137
560 Ga0501043_0005215
561 Ga0501043_0069032
562 Ga0501047_0000835
563 Ga0501048_0008721
564 Ga0501048_0022788
565 Ga0501048_0027000
566 Ga0501067_0006280
567 Ga0501069_0002791
568 Ga0501071_0036133
569 Ga0501071_0069214
570 Ga0501072_0004875
571 Ga0501072_0011873
572 Ga0501072_0033754
573 Ga0501073_0012976
574 Ga0501075_0000071
575 Ga0501075_0009056
576 Ga0501075_0017790
577 Ga0501076_0000032
578 Ga0501076_0003408
579 Ga0501076_0038806
580 Ga0501077_0031090
581 Ga0501207_000315
582 Ga0501216_000508
583 Ga0501217_001099
584 Ga0501223_001167
585 Ga0501227_001365
586 Ga0501233_000681
587 Ga0501249_001137
588 Ga0501257_006780
589 Ga0501225_0001743
590 Ga0501234_000385
591 Ga0501079_0011261
592 Ga0501079_0044643
593 Ga0501080_0129701
594 Ga0501081_0003473
595 Ga0501081_0004376
596 Ga0501081_0066965
597 Ga0501083_0033686
598 Ga0501280_002820
599 Ga0501035_0126633
600 Ga0501045_0001144
601 Ga0501045_0004123
602 Ga0501226_000661
603 nmdc:mga05p37_101165_c1
604 nmdc:mga05p37_179110_c1
605 nmdc:mga05p37_2035_c1
606 nmdc:mga05p37_224397_c1
607 nmdc:mga05p37_66049_c1
608 nmdc:mga09592_11763_c1
609 nmdc:mga06r32_43644_c1
610 nmdc:mga08y16_8_c1
611 nmdc:mga0n895_130295_c1
612 nmdc:mga0n895_43641_c1
613 nmdc:mga0rr50_62097_c1
614 nmdc:mga08x19_4305_c1
615 Ga0500635_0000383
616 Ga0500583_0000553
617 Ga0500641_0000004
618 Ga0500641_0000057
619 Ga0500608_000109
620 Ga0500658_0000001
621 Ga0500568_0001968
622 Ga0500568_0020451
623 Ga0500573_0002127
624 Ga0500589_010440
625 Ga0501084_0000968
626 Ga0501084_0020940
627 Ga0501084_0033178
628 Ga0501082_0003432
629 Ga0501082_0006521
630 Ga0501082_0019845
631 Ga0530510_0000003
632 Ga0530510_0003470
633 2524001473
634 2644028921
635 2687234889
636 2739793646
637 2740000084
638 2740004900
639 2882457522
640 2883579492
641 2904423642
642 2941546867
643 2967747150
644 8033234249

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09848

SLFN-g3_helicase

Schlafen group 3, DNA/RNA helicase domain

291

681

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xgy-assembly1.cif.gz_C cryo-em structure of hemoglobin 0.7222 16 54
4mqc-assembly1.cif.gz_A-2 carbonmonoxy structure of hemoglobin evans alphav62mbetawt 0.6951 16 56
2hco-assembly1.cif.gz_A the structure of human carbonmonoxy haemoglobin at 2.7 angstroms resolution 0.6789 10 52
1xz4-assembly1.cif.gz_C intersubunit interactions associated with tyr42alpha stabilize the quaternary-t tetramer but are not major quaternary constraints in deoxyhemoglobin: alphay42a deoxyhemoglobin no-salt 0.6675 10 54
7pch-assembly1.cif.gz_A human carboxyhemoglobin bound to staphylococcus aureus hemophore isdb - 1:2 complex 0.6446 10 56
ID Description Score Start End Superfamily
af_P45423_222_339_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.6754 29 132 3.40.1350.10
3wfxA00 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.6665 8 54 1.10.490.10
3fs4B00 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.6664 10 54 1.10.490.10
3bomA00 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.6638 8 56 1.10.490.10
1y8wA00 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.6625 10 52 1.10.490.10
ID Description Score Start End GO Terms
AF-A0A3N5G5U5-F1-model_v4 DUF2075 domain-containing protein 0.994 456 657
AF-A0A6N6KQ94-F1-model_v4 DUF2075 domain-containing protein 0.9916 488 657
AF-A0A3N5G5U5-F1-model_v4 DUF2075 domain-containing protein 0.9795 456 657
AF-D4XTJ7-F1-model_v4 Schlafen group 3-like DNA/RNA helicase domain-containing protein 0.9788 454 657
AF-A0A4Q7G097-F1-model_v4 Schlafen group 3-like DNA/RNA helicase domain-containing protein 0.9782 453 657

Map