F407308

General Info

Members Datasets Scaffolds Average Seq Length
324 200 648 214

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100007735|Ga0070716_1000077354
Length 251
Sequence MAAARAPTAGPRGRGAYSRGNRCHEFGQAADGRYNDPAMDLLWSLIDILLHLDRHLSDVIQHYGIWTYLILFLIVFCETGLVVTPFLPGDSLLFAVGTFAALGALDLALVIVLLSVAAILGDSLNYAIGARLGPRVFHEESRFLNRRHLERTHAFYERYGAKTIVIARFVPIVRTFAPFVAGIGQMRYGRFLFYNVAGGLGWIVLLTAGGYLFGNIPVVRRNFSLVIFAIIILSILPALIEVARQRGRARR

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
126 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
127 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
128 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
129 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
130 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
133 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
134 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
135 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
136 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
193 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
194 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
195 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
196 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
197 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
198 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
199 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
200 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.22
Metatranscriptomes 0
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 1.23
Rhizosphere 96.91
Stem 0
Stem Tuber 0
Unclassified 1.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100007735 3300006173 Bacteria 5304
2 JGI25405J52794_10022198 3300003911 Bacteria 1286
3 Ga0065704_10086094 3300005289 Bacteria 3153
4 Ga0065715_10347988 3300005293 Bacteria 956
5 Ga0070676_10000234 3300005328 Bacteria 23763
6 Ga0070676_10058176 3300005328 Bacteria 2290
7 Ga0068869_100001526 3300005334 Bacteria 13742
8 Ga0068869_100025605 3300005334 Bacteria 4098
9 Ga0068869_100584241 3300005334 Bacteria 942
10 Ga0070682_100001738 3300005337 Bacteria 12114
11 Ga0070660_100000338 3300005339 Bacteria 31123
12 Ga0070689_100044236 3300005340 Bacteria 3425
13 Ga0070689_100820206 3300005340 Bacteria 819
14 Ga0070687_100006078 3300005343 Bacteria 4928
15 Ga0070661_100002433 3300005344 Bacteria 12786
16 Ga0070692_10002677 3300005345 Bacteria 6979
17 Ga0070669_100073046 3300005353 Bacteria 2541
18 Ga0070675_100363102 3300005354 Bacteria 1286
19 Ga0070671_100062571 3300005355 Bacteria 3099
20 Ga0070659_100000431 3300005366 Bacteria 31617
21 Ga0070667_101046259 3300005367 Bacteria 762
22 Ga0070703_10131142 3300005406 Bacteria 921
23 Ga0070701_10210896 3300005438 Bacteria 1153
24 Ga0070711_100270911 3300005439 Bacteria 1340
25 Ga0070705_100022879 3300005440 Bacteria 3346
26 Ga0070705_100061741 3300005440 Bacteria 2229
27 Ga0070705_100071752 3300005440 Bacteria 2095
28 Ga0070705_100085137 3300005440 Bacteria 1953
29 Ga0070705_100322171 3300005440 Bacteria 1116
30 Ga0070700_100655716 3300005441 Unclassified 829
31 Ga0070694_100004360 3300005444 Bacteria 8507
32 Ga0070694_100019796 3300005444 Bacteria 4284
33 Ga0070694_100084746 3300005444 Bacteria 2211
34 Ga0070708_100008572 3300005445 Bacteria 8216
35 Ga0070708_100066114 3300005445 Bacteria 3244
36 Ga0070663_100017863 3300005455 Bacteria 4637
37 Ga0070662_100011851 3300005457 Bacteria 5764
38 Ga0068867_100011405 3300005459 Bacteria 6270
39 Ga0070706_100022066 3300005467 Bacteria 5863
40 Ga0070706_100029003 3300005467 Bacteria 5097
41 Ga0070706_100063593 3300005467 Bacteria 3410
42 Ga0070706_100155020 3300005467 Bacteria 2138
43 Ga0070707_100001911 3300005468 Bacteria 19959
44 Ga0070707_100016135 3300005468 Bacteria 7009
45 Ga0070707_100042921 3300005468 Bacteria 4330
46 Ga0070707_100103113 3300005468 Bacteria 2764
47 Ga0070698_100037407 3300005471 Bacteria 5004
48 Ga0070698_100076563 3300005471 Bacteria 3347
49 Ga0070698_100139564 3300005471 Bacteria 2376
50 Ga0070698_100768618 3300005471 Bacteria 907
51 Ga0070699_100024753 3300005518 Bacteria 5175
52 Ga0070699_100047457 3300005518 Bacteria 3716
53 Ga0070699_100048422 3300005518 Bacteria 3678
54 Ga0070699_100064937 3300005518 Bacteria 3166
55 Ga0070699_100284404 3300005518 Bacteria 1482
56 Ga0070679_100000975 3300005530 Bacteria 24930
57 Ga0070684_100853681 3300005535 Bacteria 852
58 Ga0070697_100006270 3300005536 Bacteria 9208
59 Ga0070697_100052590 3300005536 Bacteria 3309
60 Ga0070697_100056506 3300005536 Bacteria 3193
61 Ga0070697_100058071 3300005536 Bacteria 3148
62 Ga0070697_100064790 3300005536 Bacteria 2985
63 Ga0070697_100112306 3300005536 Bacteria 2272
64 Ga0070697_100273830 3300005536 Bacteria 1447
65 Ga0068853_100003158 3300005539 Bacteria 12598
66 Ga0070695_100001348 3300005545 Bacteria 13607
67 Ga0070695_100005906 3300005545 Bacteria 7223
68 Ga0070695_100029680 3300005545 Bacteria 3399
69 Ga0070695_100292651 3300005545 Bacteria 1201
70 Ga0070696_100039288 3300005546 Bacteria 3268
71 Ga0070696_100288353 3300005546 Bacteria 1253
72 Ga0070693_100036804 3300005547 Bacteria 2723
73 Ga0070665_100097831 3300005548 Bacteria 2939
74 Ga0070704_100026749 3300005549 Bacteria 3817
75 Ga0070704_100160497 3300005549 Bacteria 1777
76 Ga0070704_100625248 3300005549 Bacteria 948
77 Ga0068855_100000993 3300005563 Bacteria 35303
78 Ga0068855_100085388 3300005563 Bacteria 3652
79 Ga0070664_100107543 3300005564 Bacteria 2432
80 Ga0068857_100184736 3300005577 Unclassified 1898
81 Ga0068854_100023024 3300005578 Bacteria 4252
82 Ga0068856_100025619 3300005614 Bacteria 5751
83 Ga0070702_100464656 3300005615 Bacteria 921
84 Ga0068859_100004187 3300005617 Bacteria 14727
85 Ga0068859_100011951 3300005617 Bacteria 8720
86 Ga0068859_100719876 3300005617 Bacteria 1088
87 Ga0068864_100125505 3300005618 Bacteria 2299
88 Ga0068861_100197033 3300005719 Bacteria 1688
89 Ga0068861_100246588 3300005719 Bacteria 1522
90 Ga0068870_10003942 3300005840 Bacteria 6335
91 Ga0068863_100080910 3300005841 Bacteria 3077
92 Ga0068858_100096176 3300005842 Bacteria 2760
93 Ga0068860_100021130 3300005843 Bacteria 6304
94 Ga0068862_100011813 3300005844 Bacteria 7212
95 Ga0068862_100044604 3300005844 Bacteria 3782
96 Ga0081455_10000666 3300005937 Bacteria 44517
97 Ga0068871_100195719 3300006358 Bacteria 1743
98 Ga0075431_100081200 3300006847 Bacteria 3348
99 Ga0075433_10029495 3300006852 Bacteria 4675
100 Ga0075434_100019916 3300006871 Bacteria 6498
101 Ga0075434_100027073 3300006871 Bacteria 5627
102 Ga0075436_100099607 3300006914 Bacteria 2023
103 Ga0097620_100004187 3300006931 Bacteria 14727
104 Ga0097620_100011951 3300006931 Bacteria 8720
105 Ga0097620_100719838 3300006931 Bacteria 1088
106 Ga0075435_100135418 3300007076 Bacteria 2063
107 Ga0099794_10006950 3300007265 Bacteria 4615
108 Ga0111539_10186760 3300009094 Bacteria 2420
109 Ga0114129_10052969 3300009147 Bacteria 5693
110 Ga0114129_10060934 3300009147 Bacteria 5275
111 Ga0114129_10598425 3300009147 Bacteria 1429
112 Ga0114129_10718884 3300009147 Bacteria 1282
113 Ga0105243_10000046 3300009148 Bacteria 155277
114 Ga0105243_10099296 3300009148 Bacteria 2413
115 Ga0105243_10349994 3300009148 Bacteria 1356
116 Ga0105241_10002786 3300009174 Bacteria 13092
117 Ga0105248_10150742 3300009177 Bacteria 2623
118 Ga0105248_10197374 3300009177 Bacteria 2268
119 Ga0105249_10426436 3300009553 Unclassified 1361
120 Ga0105246_10078039 3300011119 Bacteria 2351
121 Ga0157373_10000923 3300013100 Bacteria 22770
122 Ga0157373_10673545 3300013100 Bacteria 757
123 Ga0157371_10044866 3300013102 Bacteria 3147
124 Ga0157371_10216089 3300013102 Bacteria 1376
125 Ga0157370_10323696 3300013104 Bacteria 1422
126 Ga0157378_10564927 3300013297 Bacteria 1145
127 Ga0163162_10829796 3300013306 Bacteria 1040
128 Ga0157372_10008045 3300013307 Bacteria 11212
129 Ga0157372_10354242 3300013307 Unclassified 1710
130 Ga0157375_10069791 3300013308 Bacteria 3521
131 Ga0163163_10175498 3300014325 Bacteria 2189
132 Ga0157377_10079044 3300014745 Bacteria 1918
133 Ga0207645_10000033 3300025907 Bacteria 91108
134 Ga0207643_10001741 3300025908 Bacteria 12201
135 Ga0207684_10000290 3300025910 Bacteria 72057
136 Ga0207684_10017803 3300025910 Bacteria 6093
137 Ga0207684_10030532 3300025910 Bacteria 4587
138 Ga0207684_10110545 3300025910 Bacteria 2352
139 Ga0207707_10001156 3300025912 Bacteria 25046
140 Ga0207663_10206569 3300025916 Bacteria 1420
141 Ga0207660_10001900 3300025917 Bacteria 13913
142 Ga0207662_10015911 3300025918 Bacteria 4237
143 Ga0207657_10000168 3300025919 Bacteria 66952
144 Ga0207652_10001565 3300025921 Bacteria 20129
145 Ga0207646_10000203 3300025922 Bacteria 80626
146 Ga0207646_10000361 3300025922 Bacteria 61092
147 Ga0207646_10000561 3300025922 Bacteria 48912
148 Ga0207646_10035476 3300025922 Bacteria 4504
149 Ga0207646_10060381 3300025922 Bacteria 3385
150 Ga0207646_10108544 3300025922 Bacteria 2490
151 Ga0207646_10116182 3300025922 Bacteria 2403
152 Ga0207646_10148784 3300025922 Bacteria 2111
153 Ga0207681_10090565 3300025923 Bacteria 2183
154 Ga0207644_10087894 3300025931 Bacteria 2311
155 Ga0207690_10002520 3300025932 Bacteria 11072
156 Ga0207706_10027502 3300025933 Bacteria 5085
157 Ga0207706_10332630 3300025933 Bacteria 1321
158 Ga0207709_10000020 3300025935 Bacteria 392366
159 Ga0207709_10110400 3300025935 Bacteria 1838
160 Ga0207670_10101812 3300025936 Bacteria 2053
161 Ga0207665_10000522 3300025939 Bacteria 25926
162 Ga0207689_10000139 3300025942 Bacteria 62281
163 Ga0207689_10023807 3300025942 Bacteria 5137
164 Ga0207679_10000654 3300025945 Bacteria 23208
165 Ga0207679_10253312 3300025945 Bacteria 1498
166 Ga0207667_10025403 3300025949 Bacteria 6483
167 Ga0207667_10041713 3300025949 Bacteria 4880
168 Ga0207651_10081626 3300025960 Bacteria 2331
169 Ga0207712_10301255 3300025961 Unclassified 1315
170 Ga0207640_10036324 3300025981 Bacteria 3092
171 Ga0207703_10024572 3300026035 Bacteria 4739
172 Ga0207639_10002449 3300026041 Bacteria 12448
173 Ga0207678_10003079 3300026067 Bacteria 15081
174 Ga0207708_10544601 3300026075 Bacteria 978
175 Ga0207702_10001416 3300026078 Bacteria 23943
176 Ga0207641_10331366 3300026088 Bacteria 1446
177 Ga0207648_10001424 3300026089 Bacteria 26398
178 Ga0207674_10007974 3300026116 Bacteria 12288
179 Ga0207674_10014926 3300026116 Bacteria 8560
180 Ga0207675_100009654 3300026118 Bacteria 9029
181 Ga0207683_10164168 3300026121 Bacteria 2009
182 Ga0207683_10808028 3300026121 Bacteria 870
183 Ga0209969_1002870 3300027360 Bacteria 2384
184 Ga0209967_1010416 3300027364 Bacteria 1296
185 Ga0209970_1007882 3300027614 Bacteria 1748
186 Ga0210002_1007482 3300027617 Bacteria 1656
187 Ga0209983_1000359 3300027665 Bacteria 9610
188 Ga0209588_1047207 3300027671 Bacteria 1393
189 Ga0209971_1000091 3300027682 Bacteria 27342
190 Ga0209998_10001166 3300027717 Bacteria 6504
191 Ga0209974_10000497 3300027876 Bacteria 13125
192 Ga0209974_10043673 3300027876 Bacteria 1494
193 Ga0209974_10073258 3300027876 Bacteria 1171
194 Ga0268266_10398434 3300028379 Bacteria 1301
195 Ga0268265_10157840 3300028380 Unclassified 1922
196 Ga0268265_10385672 3300028380 Bacteria 1290
197 Ga0268264_10032951 3300028381 Bacteria 4252
198 Ga0268264_10637563 3300028381 Bacteria 1053
199 Ga0307414_10096930 3300032004 Bacteria 2208
200 Ga0307414_10221985 3300032004 Bacteria 1552
201 Ga0373950_0004968 3300034818 Bacteria 1969
202 Ga0373929_0000003 3300035085 Bacteria 575058
203 Ga0373951_0004593 3300035091 Bacteria 3269
204 Ga0373961_0028173 3300035241 Bacteria 1547
205 Ga0373931_0089007 3300035691 Bacteria 1717
206 Ga0436365_1143580 3300039437 Bacteria 2103
207 Ga0439448_0006326 3300042005 Bacteria 3402
208 Ga0439455_0009791 3300042012 Bacteria 2090
209 Ga0439463_023761 3300042016 Bacteria 1535
210 Ga0439459_0084947 3300042438 Bacteria 753
211 Ga0439464_0010811 3300042439 Bacteria 2412
212 Ga0451577_0001723 3300042876 Bacteria 28201
213 Ga0451577_0019057 3300042876 Bacteria 6316
214 Ga0451577_0025058 3300042876 Bacteria 5415
215 Ga0451577_0107052 3300042876 Bacteria 2499
216 Ga0451577_0220455 3300042876 Bacteria 1715
217 Ga0453683_0033953 3300044673 Bacteria 3217
218 Ga0453684_0001443 3300044712 Bacteria 67704
219 Ga0453684_0004716 3300044712 Bacteria 28201
220 Ga0453684_0058326 3300044712 Bacteria 4987
221 Ga0453684_0210058 3300044712 Bacteria 2263
222 Ga0453684_0810858 3300044712 Bacteria 1009
223 Ga0451576_0000197 3300045051 Bacteria 152331
224 Ga0451576_0000267 3300045051 Bacteria 127501
225 Ga0451576_0005434 3300045051 Bacteria 15978
226 Ga0451576_0023046 3300045051 Bacteria 6747
227 Ga0451576_0053639 3300045051 Bacteria 4222
228 Ga0451576_0075790 3300045051 Bacteria 3500
229 Ga0451576_0100005 3300045051 Bacteria 3016
230 Ga0451576_0486444 3300045051 Bacteria 1296
231 Ga0451576_0708124 3300045051 Bacteria 1058
232 Ga0495580_0044831 3300046472 Bacteria 3144
233 Ga0495643_0003042 3300046522 Bacteria 12606
234 Ga0495686_0000220 3300047472 Bacteria 104967
235 Ga0496102_0111994 3300048905 Bacteria 2545
236 Ga0496103_0197747 3300048906 Bacteria 1293
237 Ga0496106_0015124 3300048909 Bacteria 5712
238 Ga0496108_0368556 3300048911 Bacteria 1254
239 Ga0496116_0001204 3300048919 Bacteria 30298
240 Ga0496117_0007287 3300048920 Bacteria 10866
241 Ga0496122_0017899 3300048925 Bacteria 6582
242 Ga0496124_0432601 3300048927 Bacteria 903
243 Ga0501033_0003810 3300049570 Bacteria 12268
244 Ga0501034_0002245 3300049571 Bacteria 23785
245 Ga0501036_0096987 3300049572 Bacteria 2493
246 Ga0501036_0154766 3300049572 Bacteria 1934
247 Ga0501037_0036050 3300049573 Bacteria 3646
248 Ga0501038_0042103 3300049574 Bacteria 3978
249 Ga0501039_0010436 3300049575 Bacteria 7078
250 Ga0501039_0255823 3300049575 Bacteria 1377
251 Ga0501040_0013365 3300049576 Bacteria 5395
252 Ga0501041_0029122 3300049577 Bacteria 3332
253 Ga0501042_0004738 3300049578 Bacteria 8684
254 Ga0501043_0001912 3300049579 Bacteria 17850
255 Ga0501046_0000256 3300049580 Bacteria 54366
256 Ga0501046_0214571 3300049580 Bacteria 1427
257 Ga0501047_0031300 3300049581 Bacteria 5131
258 Ga0501047_0087269 3300049581 Bacteria 2997
259 Ga0501048_0015816 3300049582 Bacteria 5566
260 Ga0501048_0022036 3300049582 Bacteria 4663
261 Ga0501067_0143973 3300049583 Bacteria 1328
262 Ga0501068_0145342 3300049584 Bacteria 1488
263 Ga0501068_0155941 3300049584 Bacteria 1437
264 Ga0501071_0099053 3300049587 Bacteria 2148
265 Ga0501071_0328393 3300049587 Bacteria 1162
266 Ga0501072_0857793 3300049588 Bacteria 710
267 Ga0501074_0099542 3300049590 Bacteria 2081
268 Ga0501074_0170014 3300049590 Bacteria 1556
269 Ga0501074_0227488 3300049590 Bacteria 1328
270 Ga0501075_0027596 3300049591 Bacteria 4185
271 Ga0501075_0081796 3300049591 Bacteria 2445
272 Ga0501076_0002735 3300049592 Bacteria 12207
273 Ga0501076_0078108 3300049592 Bacteria 2656
274 Ga0501077_0021880 3300049593 Bacteria 4048
275 Ga0501077_0075922 3300049593 Bacteria 2128
276 Ga0501079_0002601 3300049741 Bacteria 13121
277 Ga0501079_0043407 3300049741 Bacteria 3470
278 Ga0501080_0005737 3300049742 Bacteria 11106
279 Ga0501080_0021929 3300049742 Bacteria 5916
280 Ga0501080_0128505 3300049742 Bacteria 2346
281 Ga0501081_0033222 3300049743 Bacteria 3504
282 Ga0501081_0033521 3300049743 Bacteria 3490
283 Ga0501081_0140406 3300049743 Bacteria 1731
284 Ga0501083_0004985 3300049744 Bacteria 9413
285 Ga0501083_0139383 3300049744 Bacteria 1588
286 Ga0501035_0036309 3300049822 Bacteria 4467
287 Ga0501035_0370716 3300049822 Bacteria 1195
288 Ga0501044_0029043 3300049823 Bacteria 5832
289 Ga0501045_0000178 3300049824 Bacteria 35077
290 nmdc:mga05p37_31045_c1 3300050507 Bacteria 6524
291 nmdc:mga05p37_76910_c1 3300050507 Bacteria 4108
292 nmdc:mga09592_162372_c1 3300050508 Bacteria 1930
293 nmdc:mga0qj67_319694_c1 3300050509 Bacteria 1256
294 nmdc:mga06r32_585356_c1 3300050510 Bacteria 1088
295 nmdc:mga0n895_159676_c1 3300050512 Bacteria 2286
296 nmdc:mga0n895_44464_c1 3300050512 Bacteria 4331
297 nmdc:mga0rr50_15534_c1 3300050513 Bacteria 5029
298 nmdc:mga0rr50_317452_c1 3300050513 Bacteria 1306
299 nmdc:mga0rr50_39163_c1 3300050513 Bacteria 3437
300 nmdc:mga08x19_25739_c1 3300050514 Bacteria 3668
301 nmdc:mga0a205_33237_c1 3300050515 Bacteria 4946
302 nmdc:mga0a205_33255_c1 3300050515 Bacteria 4945
303 Ga0500650_0243500 3300053098 Bacteria 808
304 Ga0501084_0007372 3300054114 Bacteria 9064
305 Ga0501084_0084387 3300054114 Bacteria 2666
306 Ga0501084_0213244 3300054114 Bacteria 1629
307 Ga0501084_0261984 3300054114 Bacteria 1459
308 Ga0501082_0005151 3300060353 Bacteria 11379
309 Ga0501082_0171012 3300060353 Bacteria 1889
310 Ga0501082_0190096 3300060353 Bacteria 1786
311 Ga0501082_0420990 3300060353 Bacteria 1166
312 Ga0530510_0019687 3300061734 Bacteria 4792
313 Ga0530510_0021269 3300061734 Bacteria 4615
314 Ga0530510_0316796 3300061734 Bacteria 1169
315 Ga0530510_0480083 3300061734 Bacteria 941
316 2722725630 2721755487 Bacteria 6357185
317 2852630328 2852627209 Bacteria 5896285
318 2890738708 2890737413 Bacteria 4269751
319 2896320325 2896317667 Bacteria 4606601
320 2896344857 2896344016 Bacteria 3811746
321 2898714620 2898713307 Bacteria 4110805
322 2904782341 2904780799 Bacteria 5840761
323 2919178461 2919177583 Bacteria 5641607
324 8055592097 8055588893 Bacteria 3619545
325 Ga0070716_100007735
326 JGI25405J52794_10022198
327 Ga0065704_10086094
328 Ga0065715_10347988
329 Ga0070676_10000234
330 Ga0070676_10058176
331 Ga0068869_100001526
332 Ga0068869_100025605
333 Ga0068869_100584241
334 Ga0070682_100001738
335 Ga0070660_100000338
336 Ga0070689_100044236
337 Ga0070689_100820206
338 Ga0070687_100006078
339 Ga0070661_100002433
340 Ga0070692_10002677
341 Ga0070669_100073046
342 Ga0070675_100363102
343 Ga0070671_100062571
344 Ga0070659_100000431
345 Ga0070667_101046259
346 Ga0070703_10131142
347 Ga0070701_10210896
348 Ga0070711_100270911
349 Ga0070705_100022879
350 Ga0070705_100061741
351 Ga0070705_100071752
352 Ga0070705_100085137
353 Ga0070705_100322171
354 Ga0070700_100655716
355 Ga0070694_100004360
356 Ga0070694_100019796
357 Ga0070694_100084746
358 Ga0070708_100008572
359 Ga0070708_100066114
360 Ga0070663_100017863
361 Ga0070662_100011851
362 Ga0068867_100011405
363 Ga0070706_100022066
364 Ga0070706_100029003
365 Ga0070706_100063593
366 Ga0070706_100155020
367 Ga0070707_100001911
368 Ga0070707_100016135
369 Ga0070707_100042921
370 Ga0070707_100103113
371 Ga0070698_100037407
372 Ga0070698_100076563
373 Ga0070698_100139564
374 Ga0070698_100768618
375 Ga0070699_100024753
376 Ga0070699_100047457
377 Ga0070699_100048422
378 Ga0070699_100064937
379 Ga0070699_100284404
380 Ga0070679_100000975
381 Ga0070684_100853681
382 Ga0070697_100006270
383 Ga0070697_100052590
384 Ga0070697_100056506
385 Ga0070697_100058071
386 Ga0070697_100064790
387 Ga0070697_100112306
388 Ga0070697_100273830
389 Ga0068853_100003158
390 Ga0070695_100001348
391 Ga0070695_100005906
392 Ga0070695_100029680
393 Ga0070695_100292651
394 Ga0070696_100039288
395 Ga0070696_100288353
396 Ga0070693_100036804
397 Ga0070665_100097831
398 Ga0070704_100026749
399 Ga0070704_100160497
400 Ga0070704_100625248
401 Ga0068855_100000993
402 Ga0068855_100085388
403 Ga0070664_100107543
404 Ga0068857_100184736
405 Ga0068854_100023024
406 Ga0068856_100025619
407 Ga0070702_100464656
408 Ga0068859_100004187
409 Ga0068859_100011951
410 Ga0068859_100719876
411 Ga0068864_100125505
412 Ga0068861_100197033
413 Ga0068861_100246588
414 Ga0068870_10003942
415 Ga0068863_100080910
416 Ga0068858_100096176
417 Ga0068860_100021130
418 Ga0068862_100011813
419 Ga0068862_100044604
420 Ga0081455_10000666
421 Ga0068871_100195719
422 Ga0075431_100081200
423 Ga0075433_10029495
424 Ga0075434_100019916
425 Ga0075434_100027073
426 Ga0075436_100099607
427 Ga0097620_100004187
428 Ga0097620_100011951
429 Ga0097620_100719838
430 Ga0075435_100135418
431 Ga0099794_10006950
432 Ga0111539_10186760
433 Ga0114129_10052969
434 Ga0114129_10060934
435 Ga0114129_10598425
436 Ga0114129_10718884
437 Ga0105243_10000046
438 Ga0105243_10099296
439 Ga0105243_10349994
440 Ga0105241_10002786
441 Ga0105248_10150742
442 Ga0105248_10197374
443 Ga0105249_10426436
444 Ga0105246_10078039
445 Ga0157373_10000923
446 Ga0157373_10673545
447 Ga0157371_10044866
448 Ga0157371_10216089
449 Ga0157370_10323696
450 Ga0157378_10564927
451 Ga0163162_10829796
452 Ga0157372_10008045
453 Ga0157372_10354242
454 Ga0157375_10069791
455 Ga0163163_10175498
456 Ga0157377_10079044
457 Ga0207645_10000033
458 Ga0207643_10001741
459 Ga0207684_10000290
460 Ga0207684_10017803
461 Ga0207684_10030532
462 Ga0207684_10110545
463 Ga0207707_10001156
464 Ga0207663_10206569
465 Ga0207660_10001900
466 Ga0207662_10015911
467 Ga0207657_10000168
468 Ga0207652_10001565
469 Ga0207646_10000203
470 Ga0207646_10000361
471 Ga0207646_10000561
472 Ga0207646_10035476
473 Ga0207646_10060381
474 Ga0207646_10108544
475 Ga0207646_10116182
476 Ga0207646_10148784
477 Ga0207681_10090565
478 Ga0207644_10087894
479 Ga0207690_10002520
480 Ga0207706_10027502
481 Ga0207706_10332630
482 Ga0207709_10000020
483 Ga0207709_10110400
484 Ga0207670_10101812
485 Ga0207665_10000522
486 Ga0207689_10000139
487 Ga0207689_10023807
488 Ga0207679_10000654
489 Ga0207679_10253312
490 Ga0207667_10025403
491 Ga0207667_10041713
492 Ga0207651_10081626
493 Ga0207712_10301255
494 Ga0207640_10036324
495 Ga0207703_10024572
496 Ga0207639_10002449
497 Ga0207678_10003079
498 Ga0207708_10544601
499 Ga0207702_10001416
500 Ga0207641_10331366
501 Ga0207648_10001424
502 Ga0207674_10007974
503 Ga0207674_10014926
504 Ga0207675_100009654
505 Ga0207683_10164168
506 Ga0207683_10808028
507 Ga0209969_1002870
508 Ga0209967_1010416
509 Ga0209970_1007882
510 Ga0210002_1007482
511 Ga0209983_1000359
512 Ga0209588_1047207
513 Ga0209971_1000091
514 Ga0209998_10001166
515 Ga0209974_10000497
516 Ga0209974_10043673
517 Ga0209974_10073258
518 Ga0268266_10398434
519 Ga0268265_10157840
520 Ga0268265_10385672
521 Ga0268264_10032951
522 Ga0268264_10637563
523 Ga0307414_10096930
524 Ga0307414_10221985
525 Ga0373950_0004968
526 Ga0373929_0000003
527 Ga0373951_0004593
528 Ga0373961_0028173
529 Ga0373931_0089007
530 Ga0436365_1143580
531 Ga0439448_0006326
532 Ga0439455_0009791
533 Ga0439463_023761
534 Ga0439459_0084947
535 Ga0439464_0010811
536 Ga0451577_0001723
537 Ga0451577_0019057
538 Ga0451577_0025058
539 Ga0451577_0107052
540 Ga0451577_0220455
541 Ga0453683_0033953
542 Ga0453684_0001443
543 Ga0453684_0004716
544 Ga0453684_0058326
545 Ga0453684_0210058
546 Ga0453684_0810858
547 Ga0451576_0000197
548 Ga0451576_0000267
549 Ga0451576_0005434
550 Ga0451576_0023046
551 Ga0451576_0053639
552 Ga0451576_0075790
553 Ga0451576_0100005
554 Ga0451576_0486444
555 Ga0451576_0708124
556 Ga0495580_0044831
557 Ga0495643_0003042
558 Ga0495686_0000220
559 Ga0496102_0111994
560 Ga0496103_0197747
561 Ga0496106_0015124
562 Ga0496108_0368556
563 Ga0496116_0001204
564 Ga0496117_0007287
565 Ga0496122_0017899
566 Ga0496124_0432601
567 Ga0501033_0003810
568 Ga0501034_0002245
569 Ga0501036_0096987
570 Ga0501036_0154766
571 Ga0501037_0036050
572 Ga0501038_0042103
573 Ga0501039_0010436
574 Ga0501039_0255823
575 Ga0501040_0013365
576 Ga0501041_0029122
577 Ga0501042_0004738
578 Ga0501043_0001912
579 Ga0501046_0000256
580 Ga0501046_0214571
581 Ga0501047_0031300
582 Ga0501047_0087269
583 Ga0501048_0015816
584 Ga0501048_0022036
585 Ga0501067_0143973
586 Ga0501068_0145342
587 Ga0501068_0155941
588 Ga0501071_0099053
589 Ga0501071_0328393
590 Ga0501072_0857793
591 Ga0501074_0099542
592 Ga0501074_0170014
593 Ga0501074_0227488
594 Ga0501075_0027596
595 Ga0501075_0081796
596 Ga0501076_0002735
597 Ga0501076_0078108
598 Ga0501077_0021880
599 Ga0501077_0075922
600 Ga0501079_0002601
601 Ga0501079_0043407
602 Ga0501080_0005737
603 Ga0501080_0021929
604 Ga0501080_0128505
605 Ga0501081_0033222
606 Ga0501081_0033521
607 Ga0501081_0140406
608 Ga0501083_0004985
609 Ga0501083_0139383
610 Ga0501035_0036309
611 Ga0501035_0370716
612 Ga0501044_0029043
613 Ga0501045_0000178
614 nmdc:mga05p37_31045_c1
615 nmdc:mga05p37_76910_c1
616 nmdc:mga09592_162372_c1
617 nmdc:mga0qj67_319694_c1
618 nmdc:mga06r32_585356_c1
619 nmdc:mga0n895_159676_c1
620 nmdc:mga0n895_44464_c1
621 nmdc:mga0rr50_15534_c1
622 nmdc:mga0rr50_317452_c1
623 nmdc:mga0rr50_39163_c1
624 nmdc:mga08x19_25739_c1
625 nmdc:mga0a205_33237_c1
626 nmdc:mga0a205_33255_c1
627 Ga0500650_0243500
628 Ga0501084_0007372
629 Ga0501084_0084387
630 Ga0501084_0213244
631 Ga0501084_0261984
632 Ga0501082_0005151
633 Ga0501082_0171012
634 Ga0501082_0190096
635 Ga0501082_0420990
636 Ga0530510_0019687
637 Ga0530510_0021269
638 Ga0530510_0316796
639 Ga0530510_0480083
640 2722725630
641 2852630328
642 2890738708
643 2896320325
644 2896344857
645 2898714620
646 2904782341
647 2919178461
648 8055592097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09335

VTT_dom

VTT domain

87

212

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tdx-assembly1.cif.gz_E crystal structure of hsc l82v 0.37 9 178
7e26-assembly1.cif.gz_D structure of pffnt in apo state 0.3512 52 204
3tdx-assembly1.cif.gz_E crystal structure of hsc l82v 0.3097 9 178
3te1-assembly1.cif.gz_E crystal structure of hsc t84a 0.3089 9 188
6xz3-assembly1.cif.gz_A-2 crystal structure of tlnrd1 4-helix bundle 0.3088 52 173
ID Description Score Start End Superfamily
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6753 49 173 1.10.1760.20
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6656 49 173 1.10.1760.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5209 31 216 1.20.1250.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4574 31 216 1.20.1250.20
af_P31122_11_385_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.351 52 199 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A0S9CNV1-F1-model_v4 VTT domain-containing protein 0.9494 28 216 GO:0005886
AF-A0A7V4Y966-F1-model_v4 DedA family protein 0.9467 1 210 GO:0005886
AF-A0A101LFK2-F1-model_v4 VTT domain-containing protein 0.9425 28 216 GO:0005886
AF-A0A542IRV8-F1-model_v4 Membrane-associated protein 0.9356 28 216 GO:0005886
AF-A0A080M216-F1-model_v4 Inner membrane protein YqjA 0.9349 21 212 GO:0005886

Map