F407355

General Info

Members Datasets Scaffolds Average Seq Length
324 191 648 810

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10011690|Ga0105237_100116906
Length 854
Sequence MLYDLTHGMPKQVRHDSGLFYLHLLHYSIIIYNLVSKTQLKSNLIIMPPLKLSLLKHGLLCMVMLTCLNTLAQQSRQTIDFDKGWRFNLGAVTDGQLSGFNDAGWRSLNLPHDWSIEGKFSKDNPATPEGGALPGGIGWYRKTFTVPATSKNKLVYIDFDGVYQKSDVWINGHHLGFRPNGYISFRYELTPYLNFGGKNVIAVKVDNSVQPNSRWYSGSGIYRNVWLITTNKVAIDHWGTYVTTSEVSSASASINLKAKVKNRAGKKEVFTIKTSVYDATGKVVSAGGSVPSKTDLQDTVFENSINLTVKNPHLWSVNQPYLYKVVTQVISGKTIVDTYTTPLGIRYFNFDVDKGFSLNGKPMKILGVCDHHDLGSLGAAINTRALERQLQILKAMGCNGIRTSHNPPAPELLDLCDKLGFIVMDEAFDCWDWKKEKYDYHLFFKEWHKRDLEDQILRDRNHPSVMIWSIGNEIPQQHDTSALRIAPELAAIVHSLDKTRPITAANNNPDTSNKIIKSGAIDLVGYNYHEGEYAKFHDRYPGKKFIATETTSGLETRGYYEMPSDSIRIWPERWDKPFVREGNNVSAYDNVRPPWGSTHEATWKVMKKYDFLSGMFIWTGFDYLGEPTPYSWPSRSSYFGIVDLAGFPKDVYYMYQSEWTNKPVLHIFPHWNWETGKTVDVWAYYNHADEVELFLNGKSLGIKKKTGDDLHIMWRVKFEPGILKAVSRKDGRVVLTKEIHTAGAPAKIELSADRKLIAADGKDLSFITVKILDKDGNVVPDADNLVNFKINGEAFIASVDNGDPVSHDSFKVNYRKAFHGLALAIVQAKEKAGVINFTATSNGLQSASVVLTSK

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
42 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
43 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
44 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
95 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
119 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
126 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
127 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
128 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
129 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
147 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
148 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
149 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
150 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
154 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
155 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
156 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
161 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
162 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
163 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
164 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
165 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
166 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
167 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
168 2738541278 Niastella sp. CF465 Isolate Unclassified
169 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
170 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
171 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
172 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
173 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
174 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
175 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
176 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
177 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
178 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
179 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
180 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
181 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
182 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
183 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
184 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
185 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
186 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
187 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
188 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
189 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
190 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
191 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0.31
Isolates 10.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.64
Nodule 1.54
Rhizoplane 0.62
Rhizosphere 75.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10011690 3300009545 Bacteria 9286
2 JGI24735J21928_10000013 3300002067 Bacteria 208663
3 JGI24735J21928_10000015 3300002067 Bacteria 167231
4 JGI25162J39368_1000005 3300002737 Bacteria 435925
5 JGI25162J39368_1003176 3300002737 Bacteria 5127
6 JGI25406J46586_10005883 3300003203 Bacteria 5675
7 JGI25165J46597_1001274 3300003214 Bacteria 14736
8 JGI25165J46597_1001451 3300003214 Bacteria 12487
9 rootH2_10005460 3300003320 Bacteria 28154
10 rootH2_10021466 3300003320 Bacteria 12680
11 rootH1_10001738 3300003323 Bacteria 61468
12 rootH1_10007213 3300003323 Bacteria 37505
13 rootH1_10074326 3300003323 Bacteria 22857
14 rootH1_10127224 3300003323 Bacteria 4140
15 rootH1_10133437 3300003323 Bacteria 5637
16 rootH1_10285050 3300003323 Bacteria 5863
17 Ga0058863_10004151 3300004799 Bacteria 5363
18 Ga0070658_10000099 3300005327 Bacteria 76585
19 Ga0070658_10029992 3300005327 Bacteria 4370
20 Ga0070676_10001263 3300005328 Bacteria 12730
21 Ga0070670_100027358 3300005331 Bacteria 4906
22 Ga0068869_100010998 3300005334 Bacteria 5927
23 Ga0070666_10000637 3300005335 Bacteria 21149
24 Ga0070680_100000075 3300005336 Bacteria 53328
25 Ga0070682_100003737 3300005337 Bacteria 8463
26 Ga0068868_100001905 3300005338 Bacteria 14329
27 Ga0068868_100017627 3300005338 Bacteria 5325
28 Ga0068868_100070552 3300005338 Bacteria 2786
29 Ga0070691_10005755 3300005341 Bacteria 5653
30 Ga0070671_100024419 3300005355 Bacteria 4948
31 Ga0070673_100067633 3300005364 Bacteria 2858
32 Ga0070659_100000862 3300005366 Bacteria 22163
33 Ga0070659_100009143 3300005366 Bacteria 7268
34 Ga0070667_100001496 3300005367 Bacteria 20928
35 Ga0070662_100000013 3300005457 Bacteria 125019
36 Ga0070662_100008226 3300005457 Bacteria 6792
37 Ga0070681_10015865 3300005458 Bacteria 7510
38 Ga0068867_100001318 3300005459 Bacteria 17186
39 Ga0070679_100000567 3300005530 Bacteria 31353
40 Ga0070679_100006226 3300005530 Bacteria 11113
41 Ga0070684_100029471 3300005535 Bacteria 4652
42 Ga0070684_100095707 3300005535 Bacteria 2646
43 Ga0068853_100007917 3300005539 Bacteria 8521
44 Ga0070665_100000010 3300005548 Bacteria 529545
45 Ga0068855_100000014 3300005563 Bacteria 232720
46 Ga0068855_100000127 3300005563 Bacteria 96826
47 Ga0068855_100001882 3300005563 Bacteria 26063
48 Ga0068855_100003572 3300005563 Bacteria 19016
49 Ga0068855_100048240 3300005563 Bacteria 5028
50 Ga0068856_100000006 3300005614 Bacteria 223827
51 Ga0068856_100029706 3300005614 Bacteria 5339
52 Ga0068856_100036426 3300005614 Bacteria 4824
53 Ga0068852_100005396 3300005616 Bacteria 9142
54 Ga0068852_100055238 3300005616 Bacteria 3426
55 Ga0068859_100000029 3300005617 Bacteria 178422
56 Ga0068863_100002832 3300005841 Bacteria 17171
57 Ga0068863_100046735 3300005841 Bacteria 4109
58 Ga0068858_100003697 3300005842 Bacteria 15153
59 Ga0068860_100001069 3300005843 Bacteria 30180
60 Ga0068860_100007318 3300005843 Bacteria 11037
61 Ga0068860_100026933 3300005843 Bacteria 5540
62 Ga0081539_10001743 3300005985 Bacteria 34704
63 Ga0075366_10000043 3300006195 Bacteria 45049
64 Ga0075366_10000387 3300006195 Bacteria 20440
65 Ga0075366_10001818 3300006195 Bacteria 10777
66 Ga0075366_10007607 3300006195 Bacteria 5994
67 Ga0097621_100000315 3300006237 Bacteria 32795
68 Ga0068871_100002276 3300006358 Bacteria 13064
69 Ga0097620_100000029 3300006931 Bacteria 178422
70 Ga0099824_1000021 3300006942 Bacteria 88647
71 Ga0079104_1000457 3300006946 Bacteria 46180
72 Ga0099826_10000371 3300006948 Bacteria 20829
73 Ga0105244_10000038 3300009036 Bacteria 158460
74 Ga0105240_10000010 3300009093 Bacteria 537830
75 Ga0105240_10000128 3300009093 Bacteria 156107
76 Ga0105240_10004438 3300009093 Bacteria 21397
77 Ga0105240_10047298 3300009093 Bacteria 5445
78 Ga0105240_10048270 3300009093 Bacteria 5382
79 Ga0105247_10000259 3300009101 Bacteria 48820
80 Ga0105241_10000512 3300009174 Bacteria 29214
81 Ga0105241_10001337 3300009174 Bacteria 18724
82 Ga0105241_10003724 3300009174 Bacteria 11322
83 Ga0105237_10001259 3300009545 Bacteria 33851
84 Ga0105237_10001655 3300009545 Bacteria 28910
85 Ga0105238_10030958 3300009551 Bacteria 5446
86 Ga0105249_10034249 3300009553 Bacteria 4601
87 Ga0105239_10000032 3300010375 Bacteria 225528
88 Ga0105239_10000045 3300010375 Bacteria 186314
89 Ga0105239_10000509 3300010375 Bacteria 56261
90 Ga0105239_10002272 3300010375 Bacteria 24542
91 Ga0105239_10003803 3300010375 Bacteria 18376
92 Ga0105239_10014258 3300010375 Bacteria 8824
93 Ga0105239_10045387 3300010375 Bacteria 4816
94 Ga0105246_10007021 3300011119 Bacteria 6893
95 Ga0157373_10000037 3300013100 Bacteria 121670
96 Ga0157373_10000871 3300013100 Bacteria 23357
97 Ga0157371_10009091 3300013102 Bacteria 7851
98 Ga0157371_10009539 3300013102 Bacteria 7634
99 Ga0157370_10000091 3300013104 Bacteria 102819
100 Ga0157370_10000426 3300013104 Bacteria 52773
101 Ga0157370_10001283 3300013104 Bacteria 31390
102 Ga0157369_10000039 3300013105 Bacteria 188947
103 Ga0157369_10003069 3300013105 Bacteria 19939
104 Ga0157369_10040556 3300013105 Bacteria 5082
105 Ga0157374_10001922 3300013296 Bacteria 17417
106 Ga0157374_10071407 3300013296 Bacteria 3273
107 Ga0157378_10005294 3300013297 Bacteria 11332
108 Ga0157378_10080489 3300013297 Bacteria 2943
109 Ga0163162_10000005 3300013306 Bacteria 447195
110 Ga0163162_10015136 3300013306 Bacteria 7531
111 Ga0163162_10018008 3300013306 Bacteria 6912
112 Ga0157372_10000001 3300013307 Bacteria 791349
113 Ga0157372_10000026 3300013307 Bacteria 195407
114 Ga0157372_10002583 3300013307 Bacteria 19597
115 Ga0157372_10023444 3300013307 Bacteria 6691
116 Ga0157372_10066020 3300013307 Bacteria 4064
117 Ga0157375_10007515 3300013308 Bacteria 9530
118 Ga0157375_10073254 3300013308 Bacteria 3444
119 Ga0157379_10032983 3300014968 Bacteria 4618
120 Ga0182006_1000391 3300015261 Bacteria 36114
121 Ga0163161_10000019 3300017792 Bacteria 216758
122 Ga0207427_100482 3300025231 Bacteria 21562
123 Ga0209437_100043 3300025233 Bacteria 440454
124 Ga0209437_100170 3300025233 Bacteria 142489
125 Ga0209026_1000273 3300025250 Bacteria 61449
126 Ga0209026_1000326 3300025250 Bacteria 48276
127 Ga0209026_1001864 3300025250 Bacteria 8603
128 Ga0209233_1000266 3300025261 Bacteria 76176
129 Ga0209233_1004773 3300025261 Bacteria 4570
130 Ga0207655_1000034 3300025728 Bacteria 364737
131 Ga0207710_10000244 3300025900 Bacteria 46212
132 Ga0207680_10000016 3300025903 Bacteria 134657
133 Ga0207647_10000044 3300025904 Bacteria 90491
134 Ga0207705_10000142 3300025909 Bacteria 76788
135 Ga0207654_10002329 3300025911 Bacteria 9746
136 Ga0207654_10007925 3300025911 Bacteria 5356
137 Ga0207707_10000111 3300025912 Bacteria 82165
138 Ga0207707_10003626 3300025912 Bacteria 13691
139 Ga0207695_10000019 3300025913 Bacteria 732137
140 Ga0207695_10000179 3300025913 Bacteria 185564
141 Ga0207695_10008308 3300025913 Bacteria 13008
142 Ga0207671_10000670 3300025914 Bacteria 44624
143 Ga0207671_10000856 3300025914 Bacteria 38592
144 Ga0207671_10003027 3300025914 Bacteria 17226
145 Ga0207671_10019317 3300025914 Bacteria 5211
146 Ga0207671_10025224 3300025914 Bacteria 4465
147 Ga0207671_10058216 3300025914 Bacteria 2864
148 Ga0207660_10001342 3300025917 Bacteria 16472
149 Ga0207660_10008498 3300025917 Bacteria 6641
150 Ga0207657_10001080 3300025919 Bacteria 28910
151 Ga0207657_10020382 3300025919 Bacteria 6266
152 Ga0207652_10000713 3300025921 Bacteria 32283
153 Ga0207652_10001206 3300025921 Bacteria 23204
154 Ga0207652_10019204 3300025921 Bacteria 5617
155 Ga0207694_10082414 3300025924 Bacteria 2528
156 Ga0207644_10006949 3300025931 Bacteria 7370
157 Ga0207690_10000774 3300025932 Bacteria 20695
158 Ga0207690_10007813 3300025932 Bacteria 6350
159 Ga0207706_10000173 3300025933 Bacteria 71958
160 Ga0207706_10001412 3300025933 Bacteria 24037
161 Ga0207704_10001338 3300025938 Bacteria 10993
162 Ga0207689_10000681 3300025942 Bacteria 32411
163 Ga0207667_10000049 3300025949 Bacteria 235027
164 Ga0207667_10001758 3300025949 Bacteria 27270
165 Ga0207667_10018241 3300025949 Bacteria 7876
166 Ga0207667_10028303 3300025949 Bacteria 6088
167 Ga0207667_10037185 3300025949 Bacteria 5206
168 Ga0207667_10072898 3300025949 Bacteria 3569
169 Ga0207712_10015519 3300025961 Bacteria 4916
170 Ga0207677_10006842 3300026023 Bacteria 6263
171 Ga0207703_10006005 3300026035 Bacteria 9724
172 Ga0207639_10004875 3300026041 Bacteria 9032
173 Ga0207639_10055152 3300026041 Bacteria 3040
174 Ga0207639_10078385 3300026041 Bacteria 2607
175 Ga0207702_10000409 3300026078 Bacteria 49019
176 Ga0207702_10007219 3300026078 Bacteria 9502
177 Ga0207702_10012496 3300026078 Bacteria 7063
178 Ga0207641_10002550 3300026088 Bacteria 16762
179 Ga0207698_10031945 3300026142 Bacteria 3808
180 Ga0207698_10044891 3300026142 Bacteria 3324
181 Ga0209281_1000152 3300027111 Bacteria 167233
182 Ga0209489_110353 3300027361 Bacteria 10597
183 Ga0268266_10000032 3300028379 Bacteria 395079
184 Ga0268264_10003119 3300028381 Bacteria 14362
185 Ga0268264_10005092 3300028381 Bacteria 11137
186 Ga0307517_10000640 3300028786 Bacteria 59989
187 Ga0307515_10000107 3300028794 Bacteria 197046
188 Ga0307515_10012662 3300028794 Bacteria 15844
189 Ga0307515_10019928 3300028794 Bacteria 12016
190 Ga0265338_10052786 3300028800 Bacteria 3644
191 Ga0307513_10095779 3300031456 Bacteria 3008
192 Ga0307509_10045662 3300031507 Bacteria 4722
193 Ga0307509_10050128 3300031507 Bacteria 4472
194 Ga0307408_100000998 3300031548 Bacteria 21853
195 Ga0307413_10000002 3300031824 Bacteria 115948
196 Ga0307410_10000457 3300031852 Bacteria 16481
197 Ga0307406_10000006 3300031901 Bacteria 147237
198 Ga0307407_10005269 3300031903 Bacteria 5589
199 Ga0307416_100000091 3300032002 Bacteria 61269
200 Ga0307414_10000064 3300032004 Bacteria 106601
201 Ga0307414_10002453 3300032004 Bacteria 9709
202 Ga0307411_10000009 3300032005 Bacteria 319906
203 Ga0307507_10000071 3300033179 Bacteria 158391
204 Ga0307510_10008975 3300033180 Bacteria 11903
205 Ga0307510_10014997 3300033180 Bacteria 9164
206 Ga0316584_0078219 3300036712 Bacteria 2477
207 Ga0395899_0000001 3300037312 Bacteria 1750322
208 Ga0395899_0000011 3300037312 Bacteria 521331
209 Ga0395899_0000055 3300037312 Bacteria 220579
210 Ga0395899_0000550 3300037312 Bacteria 40383
211 Ga0395899_0000764 3300037312 Bacteria 31778
212 Ga0395900_0000048 3300037418 Bacteria 227760
213 Ga0395900_0000173 3300037418 Bacteria 103767
214 Ga0395900_0001545 3300037418 Bacteria 27359
215 Ga0395905_0000169 3300037471 Bacteria 106579
216 Ga0395905_0000641 3300037471 Bacteria 46724
217 Ga0395901_0000294 3300038443 Bacteria 61869
218 Ga0395901_0041577 3300038443 Bacteria 4765
219 Ga0439447_000010 3300041407 Bacteria 81240
220 Ga0439457_000279 3300042014 Bacteria 14060
221 Ga0466972_0000003 3300044658 Bacteria 391452
222 Ga0466972_0000099 3300044658 Bacteria 76709
223 Ga0466972_0000114 3300044658 Bacteria 68658
224 Ga0466972_0001207 3300044658 Bacteria 12441
225 Ga0466972_0008133 3300044658 Bacteria 5259
226 Ga0466966_0000202 3300044684 Bacteria 39843
227 Ga0466966_0005618 3300044684 Bacteria 8242
228 Ga0466970_0002908 3300044765 Bacteria 8293
229 Ga0466959_0000002 3300045049 Bacteria 362671
230 Ga0495650_0000144 3300046471 Bacteria 165957
231 Ga0495585_0000348 3300046492 Bacteria 44925
232 Ga0495585_0000770 3300046492 Bacteria 28347
233 Ga0495606_0000430 3300046507 Bacteria 69872
234 Ga0495606_0013245 3300046507 Bacteria 6539
235 Ga0495606_0015328 3300046507 Bacteria 5913
236 Ga0495610_0000528 3300046512 Bacteria 38434
237 Ga0495610_0001428 3300046512 Bacteria 21136
238 Ga0495616_0000434 3300046513 Bacteria 31938
239 Ga0495616_0002751 3300046513 Bacteria 11509
240 Ga0495631_0002944 3300046518 Bacteria 9432
241 Ga0495609_0004895 3300046538 Bacteria 7200
242 Ga0495633_0000021 3300046558 Bacteria 227171
243 Ga0495633_0004104 3300046558 Bacteria 9396
244 Ga0495668_0000075 3300046616 Bacteria 163092
245 Ga0495625_0000008 3300046660 Bacteria 536165
246 Ga0495625_0000059 3300046660 Bacteria 180330
247 Ga0495625_0000439 3300046660 Bacteria 62433
248 Ga0495625_0000905 3300046660 Bacteria 39943
249 Ga0495625_0018582 3300046660 Bacteria 5419
250 Ga0495670_0022999 3300046691 Bacteria 3077
251 Ga0495649_0000006 3300046694 Bacteria 542188
252 Ga0495649_0000031 3300046694 Bacteria 151547
253 Ga0495660_0004781 3300046810 Bacteria 8176
254 Ga0495660_0013806 3300046810 Bacteria 4681
255 Ga0495687_000264 3300047443 Bacteria 70552
256 Ga0495687_009955 3300047443 Bacteria 5258
257 Ga0495687_013833 3300047443 Bacteria 4185
258 Ga0495687_020045 3300047443 Bacteria 3267
259 Ga0495673_0028790 3300047469 Bacteria 2628
260 Ga0495686_0000040 3300047472 Bacteria 301210
261 Ga0495686_0000097 3300047472 Bacteria 183450
262 Ga0495686_0007275 3300047472 Bacteria 8324
263 Ga0496116_0000075 3300048919 Bacteria 231674
264 Ga0496121_0016569 3300048924 Bacteria 7600
265 Ga0496125_0000070 3300048928 Bacteria 245793
266 Ga0496126_0063357 3300048929 Bacteria 3314
267 Ga0495682_0012216 3300049460 Bacteria 3295
268 Ga0501047_0033075 3300049581 Bacteria 4993
269 Ga0501236_000109 3300049670 Bacteria 7754
270 Ga0501238_000071 3300049671 Bacteria 16646
271 Ga0501249_000022 3300049679 Bacteria 93305
272 Ga0501266_000018 3300049763 Bacteria 135236
273 Ga0501280_000083 3300049776 Bacteria 25743
274 Ga0501044_0043211 3300049823 Bacteria 4683
275 nmdc:mga0k408_1183_c1 3300050493 Bacteria 14280
276 nmdc:mga0k408_1311_c1 3300050493 Bacteria 13439
277 nmdc:mga0k408_5204_c1 3300050493 Bacteria 6900
278 nmdc:mga0k408_831_c1 3300050493 Bacteria 17017
279 Ga0500578_0000697 3300053086 Bacteria 40025
280 Ga0500583_0000084 3300053092 Bacteria 52917
281 Ga0500583_0000400 3300053092 Bacteria 13887
282 Ga0500641_0001157 3300053096 Bacteria 9394
283 Ga0500641_0001287 3300053096 Bacteria 8921
284 Ga0500608_010668 3300053122 Bacteria 3952
285 Ga0500618_000005 3300053125 Bacteria 253092
286 Ga0500658_0000005 3300053134 Bacteria 369268
287 Ga0500622_0000281 3300053156 Bacteria 51900
288 Ga0500622_0000515 3300053156 Bacteria 35966
289 Ga0500624_000485 3300053157 Bacteria 11740
290 2513234083 2513020052 Bacteria 5120511
291 2520880223 2519899754 Bacteria 5336938
292 2599480245 2599185184 Bacteria 6430550
293 2599481672 2599185184 Bacteria 6430550
294 2644012864 2643221600 Bacteria 5530138
295 2644370829 2643221667 Bacteria 5627472
296 2644641678 2643221716 Bacteria 4986332
297 2644682209 2643221725 Bacteria 5087956
298 2738726734 2738541278 Bacteria 9755573
299 2738735295 2738541279 Bacteria 6149495
300 2738767872 2738541285 Bacteria 6150075
301 2739216877 2738543007 Bacteria 6149845
302 2740003595 2739367857 Bacteria 5433684
303 2740008412 2739367858 Bacteria 5432813
304 2802655165 2802428842 Bacteria 4926114
305 2857616394 2857613821 Bacteria 4917088
306 2857622218 2857618242 Bacteria 5635925
307 2881361182 2881359912 Bacteria 4935907
308 2904421545 2904419702 Bacteria 5166287
309 2919194598 2919191525 Bacteria 5765973
310 2919437939 2919437846 Bacteria 6199444
311 2919685132 2919683626 Bacteria 5534354
312 2928082155 2928078545 Bacteria 6534839
313 2928083478 2928078545 Bacteria 6534839
314 2928149269 2928147474 Bacteria 6512076
315 2928151259 2928147474 Bacteria 6512076
316 2929151020 2929150217 Bacteria 5462483
317 2932084558 2932082852 Bacteria 6563563
318 2932087674 2932082852 Bacteria 6563563
319 2958460665 2958458903 Bacteria 5301041
320 2977272401 2977268062 Bacteria 5243061
321 8054307846 8054307821 Bacteria 5212224
322 8055420413 8055419101 Bacteria 5289643
323 8055592313 8055592153 Bacteria 5961247
324 8056440645 8056440228 Bacteria 4946504
325 Ga0105237_10011690
326 JGI24735J21928_10000013
327 JGI24735J21928_10000015
328 JGI25162J39368_1000005
329 JGI25162J39368_1003176
330 JGI25406J46586_10005883
331 JGI25165J46597_1001274
332 JGI25165J46597_1001451
333 rootH2_10005460
334 rootH2_10021466
335 rootH1_10001738
336 rootH1_10007213
337 rootH1_10074326
338 rootH1_10127224
339 rootH1_10133437
340 rootH1_10285050
341 Ga0058863_10004151
342 Ga0070658_10000099
343 Ga0070658_10029992
344 Ga0070676_10001263
345 Ga0070670_100027358
346 Ga0068869_100010998
347 Ga0070666_10000637
348 Ga0070680_100000075
349 Ga0070682_100003737
350 Ga0068868_100001905
351 Ga0068868_100017627
352 Ga0068868_100070552
353 Ga0070691_10005755
354 Ga0070671_100024419
355 Ga0070673_100067633
356 Ga0070659_100000862
357 Ga0070659_100009143
358 Ga0070667_100001496
359 Ga0070662_100000013
360 Ga0070662_100008226
361 Ga0070681_10015865
362 Ga0068867_100001318
363 Ga0070679_100000567
364 Ga0070679_100006226
365 Ga0070684_100029471
366 Ga0070684_100095707
367 Ga0068853_100007917
368 Ga0070665_100000010
369 Ga0068855_100000014
370 Ga0068855_100000127
371 Ga0068855_100001882
372 Ga0068855_100003572
373 Ga0068855_100048240
374 Ga0068856_100000006
375 Ga0068856_100029706
376 Ga0068856_100036426
377 Ga0068852_100005396
378 Ga0068852_100055238
379 Ga0068859_100000029
380 Ga0068863_100002832
381 Ga0068863_100046735
382 Ga0068858_100003697
383 Ga0068860_100001069
384 Ga0068860_100007318
385 Ga0068860_100026933
386 Ga0081539_10001743
387 Ga0075366_10000043
388 Ga0075366_10000387
389 Ga0075366_10001818
390 Ga0075366_10007607
391 Ga0097621_100000315
392 Ga0068871_100002276
393 Ga0097620_100000029
394 Ga0099824_1000021
395 Ga0079104_1000457
396 Ga0099826_10000371
397 Ga0105244_10000038
398 Ga0105240_10000010
399 Ga0105240_10000128
400 Ga0105240_10004438
401 Ga0105240_10047298
402 Ga0105240_10048270
403 Ga0105247_10000259
404 Ga0105241_10000512
405 Ga0105241_10001337
406 Ga0105241_10003724
407 Ga0105237_10001259
408 Ga0105237_10001655
409 Ga0105238_10030958
410 Ga0105249_10034249
411 Ga0105239_10000032
412 Ga0105239_10000045
413 Ga0105239_10000509
414 Ga0105239_10002272
415 Ga0105239_10003803
416 Ga0105239_10014258
417 Ga0105239_10045387
418 Ga0105246_10007021
419 Ga0157373_10000037
420 Ga0157373_10000871
421 Ga0157371_10009091
422 Ga0157371_10009539
423 Ga0157370_10000091
424 Ga0157370_10000426
425 Ga0157370_10001283
426 Ga0157369_10000039
427 Ga0157369_10003069
428 Ga0157369_10040556
429 Ga0157374_10001922
430 Ga0157374_10071407
431 Ga0157378_10005294
432 Ga0157378_10080489
433 Ga0163162_10000005
434 Ga0163162_10015136
435 Ga0163162_10018008
436 Ga0157372_10000001
437 Ga0157372_10000026
438 Ga0157372_10002583
439 Ga0157372_10023444
440 Ga0157372_10066020
441 Ga0157375_10007515
442 Ga0157375_10073254
443 Ga0157379_10032983
444 Ga0182006_1000391
445 Ga0163161_10000019
446 Ga0207427_100482
447 Ga0209437_100043
448 Ga0209437_100170
449 Ga0209026_1000273
450 Ga0209026_1000326
451 Ga0209026_1001864
452 Ga0209233_1000266
453 Ga0209233_1004773
454 Ga0207655_1000034
455 Ga0207710_10000244
456 Ga0207680_10000016
457 Ga0207647_10000044
458 Ga0207705_10000142
459 Ga0207654_10002329
460 Ga0207654_10007925
461 Ga0207707_10000111
462 Ga0207707_10003626
463 Ga0207695_10000019
464 Ga0207695_10000179
465 Ga0207695_10008308
466 Ga0207671_10000670
467 Ga0207671_10000856
468 Ga0207671_10003027
469 Ga0207671_10019317
470 Ga0207671_10025224
471 Ga0207671_10058216
472 Ga0207660_10001342
473 Ga0207660_10008498
474 Ga0207657_10001080
475 Ga0207657_10020382
476 Ga0207652_10000713
477 Ga0207652_10001206
478 Ga0207652_10019204
479 Ga0207694_10082414
480 Ga0207644_10006949
481 Ga0207690_10000774
482 Ga0207690_10007813
483 Ga0207706_10000173
484 Ga0207706_10001412
485 Ga0207704_10001338
486 Ga0207689_10000681
487 Ga0207667_10000049
488 Ga0207667_10001758
489 Ga0207667_10018241
490 Ga0207667_10028303
491 Ga0207667_10037185
492 Ga0207667_10072898
493 Ga0207712_10015519
494 Ga0207677_10006842
495 Ga0207703_10006005
496 Ga0207639_10004875
497 Ga0207639_10055152
498 Ga0207639_10078385
499 Ga0207702_10000409
500 Ga0207702_10007219
501 Ga0207702_10012496
502 Ga0207641_10002550
503 Ga0207698_10031945
504 Ga0207698_10044891
505 Ga0209281_1000152
506 Ga0209489_110353
507 Ga0268266_10000032
508 Ga0268264_10003119
509 Ga0268264_10005092
510 Ga0307517_10000640
511 Ga0307515_10000107
512 Ga0307515_10012662
513 Ga0307515_10019928
514 Ga0265338_10052786
515 Ga0307513_10095779
516 Ga0307509_10045662
517 Ga0307509_10050128
518 Ga0307408_100000998
519 Ga0307413_10000002
520 Ga0307410_10000457
521 Ga0307406_10000006
522 Ga0307407_10005269
523 Ga0307416_100000091
524 Ga0307414_10000064
525 Ga0307414_10002453
526 Ga0307411_10000009
527 Ga0307507_10000071
528 Ga0307510_10008975
529 Ga0307510_10014997
530 Ga0316584_0078219
531 Ga0395899_0000001
532 Ga0395899_0000011
533 Ga0395899_0000055
534 Ga0395899_0000550
535 Ga0395899_0000764
536 Ga0395900_0000048
537 Ga0395900_0000173
538 Ga0395900_0001545
539 Ga0395905_0000169
540 Ga0395905_0000641
541 Ga0395901_0000294
542 Ga0395901_0041577
543 Ga0439447_000010
544 Ga0439457_000279
545 Ga0466972_0000003
546 Ga0466972_0000099
547 Ga0466972_0000114
548 Ga0466972_0001207
549 Ga0466972_0008133
550 Ga0466966_0000202
551 Ga0466966_0005618
552 Ga0466970_0002908
553 Ga0466959_0000002
554 Ga0495650_0000144
555 Ga0495585_0000348
556 Ga0495585_0000770
557 Ga0495606_0000430
558 Ga0495606_0013245
559 Ga0495606_0015328
560 Ga0495610_0000528
561 Ga0495610_0001428
562 Ga0495616_0000434
563 Ga0495616_0002751
564 Ga0495631_0002944
565 Ga0495609_0004895
566 Ga0495633_0000021
567 Ga0495633_0004104
568 Ga0495668_0000075
569 Ga0495625_0000008
570 Ga0495625_0000059
571 Ga0495625_0000439
572 Ga0495625_0000905
573 Ga0495625_0018582
574 Ga0495670_0022999
575 Ga0495649_0000006
576 Ga0495649_0000031
577 Ga0495660_0004781
578 Ga0495660_0013806
579 Ga0495687_000264
580 Ga0495687_009955
581 Ga0495687_013833
582 Ga0495687_020045
583 Ga0495673_0028790
584 Ga0495686_0000040
585 Ga0495686_0000097
586 Ga0495686_0007275
587 Ga0496116_0000075
588 Ga0496121_0016569
589 Ga0496125_0000070
590 Ga0496126_0063357
591 Ga0495682_0012216
592 Ga0501047_0033075
593 Ga0501236_000109
594 Ga0501238_000071
595 Ga0501249_000022
596 Ga0501266_000018
597 Ga0501280_000083
598 Ga0501044_0043211
599 nmdc:mga0k408_1183_c1
600 nmdc:mga0k408_1311_c1
601 nmdc:mga0k408_5204_c1
602 nmdc:mga0k408_831_c1
603 Ga0500578_0000697
604 Ga0500583_0000084
605 Ga0500583_0000400
606 Ga0500641_0001157
607 Ga0500641_0001287
608 Ga0500608_010668
609 Ga0500618_000005
610 Ga0500658_0000005
611 Ga0500622_0000281
612 Ga0500622_0000515
613 Ga0500624_000485
614 2513234083
615 2520880223
616 2599480245
617 2599481672
618 2644012864
619 2644370829
620 2644641678
621 2644682209
622 2738726734
623 2738735295
624 2738767872
625 2739216877
626 2740003595
627 2740008412
628 2802655165
629 2857616394
630 2857622218
631 2881361182
632 2904421545
633 2919194598
634 2919437939
635 2919685132
636 2928082155
637 2928083478
638 2928149269
639 2928151259
640 2929151020
641 2932084558
642 2932087674
643 2958460665
644 2977272401
645 8054307846
646 8055420413
647 8055592313
648 8056440645

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18565

Glyco_hydro2_C5

Glycoside hydrolase family 2 C-terminal domain 5

748

850

0.99

PF16355

DUF4982

Domain of unknown function (DUF4982)

676

735

0.96

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

233

346

0.91

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

137

232

0.91

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

78

231

0.87

PF13364

BetaGal_ABD2

Beta-galactosidase second all-beta domain

100

210

0.77

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

351

628

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ypj-assembly2.cif.gz_B x-ray structure of the mutant of glycoside hydrolase 0.9542 27 798
7cwd-assembly1.cif.gz_A crystal structure of beta-galactosidase ii from bacillus circulans in complex with beta-d-galactopyranosyl disaccharide 0.953 27 799
5t98-assembly2.cif.gz_B crystal structure of bugh2awt 0.9452 26 799
5t99-assembly1.cif.gz_A crystal structure of bugh2awt in complex with galactoisofagomine 0.941 26 799
5t98-assembly2.cif.gz_B crystal structure of bugh2awt 0.9378 26 799
ID Description Score Start End Superfamily
5dmyC05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.993 691 798 2.60.40.10
4ypjB05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9927 691 798 2.60.40.10
5t99B05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9851 691 799 2.60.40.10
6b6lB05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9739 688 795 2.60.40.10
3gm8A05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9711 688 796 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A0N7HWC5-F1-model_v4 Glycoside hydrolase family 2 domain-containing protein 0.9897 712 798 GO:0016798
AF-K1SNL6-F1-model_v4 Glycoside hydrolase family protein 0.9895 697 798 GO:0016798
AF-A0A353RP72-F1-model_v4 Beta-galactosidase 0.9893 706 798 GO:0006508
GO:0008234
GO:0016798
AF-A0A4Q3T2K3-F1-model_v4 deleted 0.9881 252 711
AF-A0A6N7WQY1-F1-model_v4 Glycoside hydrolase family 2 domain-containing protein 0.9835 703 798 GO:0016798

Map