F407392

General Info

Members Datasets Scaffolds Average Seq Length
324 170 649 237

Family's Representative Sequence

Representative Sequence 3300025250|Ga0209026_1011553|Ga0209026_10115532
Length 235
Sequence MPNGTLFLIPVPLADEVAAKSFTPYLVDTINQIKEYIVENEKTARRFLKEAGLKTPQSELLIHDYGKYNRDSLKAFFSGLTAGKDVGLMSEAGCPGIADPGADIVAEAHKRGIKVVPLVGPSSILLALMASGFNGQSFTFHGYLPIDKAARSKKIKELEALSDRYVQTQLFIETPFRNNALLEEILKSGNPNTKLCIACNLTAADELVQTKTIAQWKTKVPDLHKKPTIFLLSRS

Samples

Sample ID Description Type Environment
1 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
7 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
8 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
111 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
124 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
140 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
143 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
149 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
150 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
153 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
154 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
155 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
156 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
157 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
158 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
159 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
160 2738541283 Pedobacter sp. OK701 Isolate Unclassified
161 2738541284 Pedobacter sp. YR016 Isolate Unclassified
162 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
163 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
164 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
165 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
166 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
167 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
168 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
169 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
170 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.99
Metatranscriptomes 0.31
Isolates 3.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.64
Nodule 0
Rhizoplane 0.62
Rhizosphere 83.64
Stem 0
Stem Tuber 0
Unclassified 2.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209026_1011553 3300025250 Bacteria 1582
2 SwRhRL2b_contig_999397 2162886007 Bacteria 14282
3 JGI24736J21556_1005926 3300001904 Bacteria 2064
4 JGI24737J22298_10000064 3300001990 Bacteria 31222
5 JGI24737J22298_10018104 3300001990 Bacteria 2263
6 JGI24735J21928_10000011 3300002067 Bacteria 217841
7 JGI24735J21928_10032448 3300002067 Bacteria 1546
8 JGI24744J21845_10000395 3300002077 Bacteria 7499
9 JGI25162J39368_1001646 3300002737 Bacteria 11124
10 JGI25164J39214_1000591 3300002772 Bacteria 16155
11 JGI25165J46597_1000891 3300003214 Bacteria 21022
12 rootH2_10011517 3300003320 Bacteria 15549
13 rootH2_10024493 3300003320 Bacteria 13938
14 rootH1_10024559 3300003323 Bacteria 32975
15 rootH1_10067937 3300003316 Bacteria 4708
16 rootH1_10067937 3300003323 Bacteria 2208
17 rootH1_10129592 3300003323 Bacteria 12992
18 rootH1_10272212 3300003323 Bacteria 5381
19 Ga0058862_11860513 3300004803 Bacteria 2872
20 Ga0065714_10004985 3300005288 Bacteria 7734
21 Ga0065714_10133393 3300005288 Bacteria 1198
22 Ga0065704_10070991 3300005289 Bacteria 13910
23 Ga0070658_10000008 3300005327 Bacteria 319912
24 Ga0070676_10001348 3300005328 Bacteria 12340
25 Ga0070683_100025840 3300005329 Bacteria 5281
26 Ga0070680_100006097 3300005336 Bacteria 9136
27 Ga0068868_100170617 3300005338 Bacteria 1801
28 Ga0070660_100042160 3300005339 Bacteria 3482
29 Ga0070674_100554239 3300005356 Bacteria 965
30 Ga0070673_100006158 3300005364 Bacteria 7774
31 Ga0070659_100000090 3300005366 Bacteria 67539
32 Ga0070663_100022849 3300005455 Bacteria 4185
33 Ga0070678_100021776 3300005456 Bacteria 4234
34 Ga0070662_100000949 3300005457 Bacteria 17750
35 Ga0070681_10023647 3300005458 Bacteria 6182
36 Ga0068867_100004709 3300005459 Bacteria 9601
37 Ga0070684_100068061 3300005535 Bacteria 3129
38 Ga0068853_100617198 3300005539 Bacteria 1030
39 Ga0070665_100000118 3300005548 Bacteria 149830
40 Ga0068855_100000465 3300005563 Bacteria 49801
41 Ga0068855_100026491 3300005563 Bacteria 6935
42 Ga0068855_100148298 3300005563 Bacteria 2669
43 Ga0068855_100170402 3300005563 Bacteria 2466
44 Ga0068857_100081511 3300005577 Bacteria 2889
45 Ga0068854_100110099 3300005578 Bacteria 2076
46 Ga0068856_100000031 3300005614 Bacteria 126668
47 Ga0068856_100004967 3300005614 Bacteria 13167
48 Ga0068856_100025682 3300005614 Bacteria 5744
49 Ga0068856_100166378 3300005614 Bacteria 2216
50 Ga0068852_100016148 3300005616 Bacteria 5813
51 Ga0075366_10000886 3300006195 Bacteria 14476
52 Ga0075366_10017586 3300006195 Bacteria 4116
53 Ga0075366_10024010 3300006195 Bacteria 3555
54 Ga0097621_100000015 3300006237 Bacteria 92182
55 Ga0068871_100000051 3300006358 Bacteria 64844
56 Ga0068865_100000120 3300006881 Bacteria 39809
57 Ga0105240_10002497 3300009093 Bacteria 29564
58 Ga0105240_10008538 3300009093 Bacteria 14638
59 Ga0105240_10075885 3300009093 Bacteria 4145
60 Ga0105240_10088007 3300009093 Bacteria 3802
61 Ga0105240_10094517 3300009093 Bacteria 3646
62 Ga0105240_10163878 3300009093 Bacteria 2638
63 Ga0105240_10167420 3300009093 Bacteria 2605
64 Ga0105240_10175259 3300009093 Bacteria 2536
65 Ga0105240_10381541 3300009093 Bacteria 1592
66 Ga0105240_10720874 3300009093 Unclassified 1087
67 Ga0105245_10073351 3300009098 Bacteria 3112
68 Ga0105243_10023694 3300009148 Bacteria 4678
69 Ga0105241_10001237 3300009174 Bacteria 19487
70 Ga0105241_10001447 3300009174 Bacteria 18185
71 Ga0105241_10008119 3300009174 Bacteria 7727
72 Ga0105241_10101314 3300009174 Bacteria 2289
73 Ga0105241_10218250 3300009174 Unclassified 1601
74 Ga0105241_10271332 3300009174 Bacteria 1445
75 Ga0105241_10477441 3300009174 Bacteria 1108
76 Ga0105241_10655162 3300009174 Bacteria 954
77 Ga0105237_10000749 3300009545 Bacteria 44615
78 Ga0105237_10000813 3300009545 Bacteria 42706
79 Ga0105237_10001172 3300009545 Bacteria 35046
80 Ga0105237_10007104 3300009545 Bacteria 12303
81 Ga0105237_10014486 3300009545 Bacteria 8242
82 Ga0105237_10128270 3300009545 Bacteria 2531
83 Ga0105237_10150142 3300009545 Bacteria 2326
84 Ga0105237_10161775 3300009545 Bacteria 2237
85 Ga0105238_10029852 3300009551 Bacteria 5552
86 Ga0105238_10095915 3300009551 Bacteria 2952
87 Ga0105239_10000045 3300010375 Bacteria 186314
88 Ga0105239_10000142 3300010375 Bacteria 101628
89 Ga0105239_10001311 3300010375 Bacteria 33533
90 Ga0105239_10008230 3300010375 Bacteria 11897
91 Ga0105239_10008439 3300010375 Bacteria 11725
92 Ga0105239_10073775 3300010375 Bacteria 3751
93 Ga0105239_10098723 3300010375 Bacteria 3228
94 Ga0105239_10130172 3300010375 Bacteria 2798
95 Ga0105239_10648902 3300010375 Bacteria 1205
96 Ga0105239_10911611 3300010375 Bacteria 1009
97 Ga0105246_10496979 3300011119 Bacteria 1035
98 Ga0157373_10000034 3300013100 Bacteria 124053
99 Ga0157373_10004245 3300013100 Bacteria 10816
100 Ga0157373_10042534 3300013100 Bacteria 3247
101 Ga0157373_10077711 3300013100 Bacteria 2341
102 Ga0157373_10078688 3300013100 Bacteria 2325
103 Ga0157371_10000789 3300013102 Bacteria 36476
104 Ga0157371_10005577 3300013102 Bacteria 10575
105 Ga0157371_10077504 3300013102 Bacteria 2353
106 Ga0157370_10001014 3300013104 Bacteria 35409
107 Ga0157370_10011031 3300013104 Bacteria 9477
108 Ga0157370_10034789 3300013104 Bacteria 4902
109 Ga0157370_10051757 3300013104 Bacteria 3922
110 Ga0157369_10007034 3300013105 Bacteria 12974
111 Ga0157369_10112364 3300013105 Bacteria 2894
112 Ga0157369_10310039 3300013105 Bacteria 1641
113 Ga0157369_10495911 3300013105 Bacteria 1263
114 Ga0157374_10000137 3300013296 Bacteria 66006
115 Ga0157374_10003839 3300013296 Bacteria 12619
116 Ga0157374_10010038 3300013296 Bacteria 8129
117 Ga0157374_10245928 3300013296 Bacteria 1760
118 Ga0157378_10056187 3300013297 Bacteria 3507
119 Ga0163162_10000012 3300013306 Bacteria 292674
120 Ga0163162_10104826 3300013306 Bacteria 2922
121 Ga0157372_10000041 3300013307 Bacteria 158494
122 Ga0157372_10000354 3300013307 Bacteria 50294
123 Ga0157372_10000632 3300013307 Bacteria 38535
124 Ga0157372_10094174 3300013307 Bacteria 3410
125 Ga0157372_10156783 3300013307 Bacteria 2630
126 Ga0157372_10437848 3300013307 Bacteria 1524
127 Ga0157372_10498547 3300013307 Bacteria 1420
128 Ga0157375_10056679 3300013308 Bacteria 3870
129 Ga0157375_10508174 3300013308 Bacteria 1369
130 Ga0157375_10608038 3300013308 Bacteria 1252
131 Ga0157375_11000479 3300013308 Bacteria 976
132 Ga0182008_10000025 3300014497 Bacteria 191222
133 Ga0182008_10000058 3300014497 Bacteria 100175
134 Ga0182008_10029526 3300014497 Bacteria 2770
135 Ga0157377_10327176 3300014745 Bacteria 1020
136 Ga0182006_1000252 3300015261 Bacteria 49820
137 Ga0182007_10006728 3300015262 Bacteria 4908
138 Ga0182007_10021226 3300015262 Bacteria 2309
139 Ga0163161_10002909 3300017792 Bacteria 12117
140 Ga0163161_10003246 3300017792 Bacteria 11433
141 Ga0163161_10027052 3300017792 Bacteria 4068
142 Ga0207427_100071 3300025231 Bacteria 159974
143 Ga0209437_100021 3300025233 Bacteria 646400
144 Ga0209437_100144 3300025233 Bacteria 164794
145 Ga0209026_1000225 3300025250 Bacteria 77234
146 Ga0209148_1019311 3300025254 Bacteria 1133
147 Ga0209233_1000035 3300025261 Bacteria 568478
148 Ga0209233_1000466 3300025261 Bacteria 25583
149 Ga0209233_1019199 3300025261 Bacteria 1823
150 Ga0209455_1001509 3300025272 Bacteria 10414
151 Ga0207647_10008853 3300025904 Bacteria 7181
152 Ga0207645_10000058 3300025907 Bacteria 78487
153 Ga0207705_10000026 3300025909 Bacteria 256051
154 Ga0207705_10083376 3300025909 Bacteria 2332
155 Ga0207654_10005242 3300025911 Bacteria 6543
156 Ga0207654_10012585 3300025911 Bacteria 4337
157 Ga0207654_10026142 3300025911 Bacteria 3158
158 Ga0207654_10058460 3300025911 Bacteria 2245
159 Ga0207654_10084141 3300025911 Bacteria 1922
160 Ga0207695_10000179 3300025913 Bacteria 185564
161 Ga0207695_10006887 3300025913 Bacteria 14627
162 Ga0207695_10025813 3300025913 Bacteria 6567
163 Ga0207695_10033626 3300025913 Bacteria 5589
164 Ga0207695_10081525 3300025913 Bacteria 3274
165 Ga0207695_10195863 3300025913 Unclassified 1936
166 Ga0207671_10000769 3300025914 Bacteria 40631
167 Ga0207671_10002136 3300025914 Bacteria 21585
168 Ga0207671_10002470 3300025914 Bacteria 19746
169 Ga0207671_10004937 3300025914 Bacteria 12507
170 Ga0207671_10009263 3300025914 Bacteria 8246
171 Ga0207671_10052637 3300025914 Bacteria 3017
172 Ga0207671_10085820 3300025914 Bacteria 2365
173 Ga0207671_10204586 3300025914 Bacteria 1542
174 Ga0207657_10043077 3300025919 Bacteria 3979
175 Ga0207694_10053651 3300025924 Bacteria 3126
176 Ga0207694_10097682 3300025924 Bacteria 2324
177 Ga0207659_10511533 3300025926 Unclassified 1017
178 Ga0207644_10001300 3300025931 Bacteria 16057
179 Ga0207690_10000261 3300025932 Bacteria 37964
180 Ga0207690_10010247 3300025932 Bacteria 5566
181 Ga0207706_10000406 3300025933 Bacteria 46320
182 Ga0207704_10000353 3300025938 Bacteria 21450
183 Ga0207691_10097541 3300025940 Bacteria 2627
184 Ga0207661_10024127 3300025944 Bacteria 4605
185 Ga0207667_10000154 3300025949 Bacteria 102734
186 Ga0207667_10007838 3300025949 Bacteria 12754
187 Ga0207667_10014493 3300025949 Bacteria 8984
188 Ga0207667_10035516 3300025949 Bacteria 5347
189 Ga0207667_10151836 3300025949 Bacteria 2384
190 Ga0207667_10412840 3300025949 Bacteria 1374
191 Ga0207667_10667698 3300025949 Bacteria 1044
192 Ga0207651_10003306 3300025960 Bacteria 7899
193 Ga0207677_10084955 3300026023 Bacteria 2283
194 Ga0207639_10141576 3300026041 Unclassified 2004
195 Ga0207639_10546144 3300026041 Unclassified 1063
196 Ga0207678_10194919 3300026067 Bacteria 1732
197 Ga0207702_10000071 3300026078 Bacteria 114394
198 Ga0207702_10136322 3300026078 Bacteria 2215
199 Ga0207702_10256379 3300026078 Bacteria 1645
200 Ga0207648_10000458 3300026089 Bacteria 45301
201 Ga0207674_10045375 3300026116 Bacteria 4521
202 Ga0207683_10011696 3300026121 Bacteria 7491
203 Ga0207698_10001861 3300026142 Bacteria 12316
204 Ga0268266_10000121 3300028379 Bacteria 154995
205 Ga0307517_10001797 3300028786 Bacteria 35313
206 Ga0307515_10000077 3300028794 Bacteria 228162
207 Ga0307515_10013740 3300028794 Bacteria 15086
208 Ga0307515_10023132 3300028794 Bacteria 10910
209 Ga0307515_10106746 3300028794 Bacteria 3318
210 Ga0265338_10030640 3300028800 Bacteria 5293
211 Ga0307509_10053218 3300031507 Bacteria 4318
212 Ga0307408_100000209 3300031548 Bacteria 62437
213 Ga0307408_100000686 3300031548 Bacteria 27839
214 Ga0307408_100002081 3300031548 Bacteria 14410
215 Ga0307405_10012694 3300031731 Bacteria 4471
216 Ga0307412_10000001 3300031911 Bacteria 822691
217 Ga0307412_10002928 3300031911 Bacteria 9474
218 Ga0307412_10033949 3300031911 Bacteria 3247
219 Ga0307412_10584593 3300031911 Bacteria 943
220 Ga0307414_10007889 3300032004 Bacteria 6006
221 Ga0307414_10013479 3300032004 Bacteria 4869
222 Ga0307414_10088471 3300032004 Unclassified 2292
223 Ga0307414_10095644 3300032004 Bacteria 2220
224 Ga0307414_10330773 3300032004 Bacteria 1300
225 Ga0307411_10035491 3300032005 Bacteria 3115
226 Ga0307507_10000143 3300033179 Bacteria 124248
227 Ga0307510_10023738 3300033180 Bacteria 7102
228 Ga0395899_0000011 3300037312 Bacteria 521331
229 Ga0395899_0000024 3300037312 Bacteria 357402
230 Ga0395899_0000269 3300037312 Bacteria 68033
231 Ga0395899_0054258 3300037312 Bacteria 2966
232 Ga0395900_0000140 3300037418 Bacteria 121917
233 Ga0395900_0000251 3300037418 Bacteria 83846
234 Ga0395900_0010899 3300037418 Bacteria 9296
235 Ga0395898_0013434 3300037466 Bacteria 8433
236 Ga0395898_0093759 3300037466 Bacteria 2885
237 Ga0395905_0000248 3300037471 Bacteria 81042
238 Ga0395905_0000829 3300037471 Bacteria 40331
239 Ga0395901_0000145 3300038443 Bacteria 91739
240 Ga0439448_0029148 3300042005 Bacteria 1746
241 Ga0466969_0108063 3300044656 Bacteria 1304
242 Ga0466966_0046796 3300044684 Bacteria 2760
243 Ga0466966_0207319 3300044684 Bacteria 1185
244 Ga0466961_0059203 3300044693 Bacteria 2436
245 Ga0495629_0027555 3300046459 Bacteria 4035
246 Ga0495638_0081926 3300046460 Bacteria 1958
247 Ga0495650_0000050 3300046471 Bacteria 318894
248 Ga0495605_0184146 3300046474 Bacteria 917
249 Ga0495585_0000100 3300046492 Bacteria 91669
250 Ga0495585_0000248 3300046492 Bacteria 56018
251 Ga0495596_0082340 3300046500 Bacteria 1249
252 Ga0495607_0211878 3300046501 Bacteria 953
253 Ga0495583_0010155 3300046506 Bacteria 5527
254 Ga0495606_0000036 3300046507 Bacteria 234596
255 Ga0495606_0007606 3300046507 Bacteria 9636
256 Ga0495606_0050169 3300046507 Bacteria 2731
257 Ga0495610_0001572 3300046512 Bacteria 20100
258 Ga0495616_0000271 3300046513 Bacteria 42005
259 Ga0495616_0004883 3300046513 Bacteria 8383
260 Ga0495628_0163302 3300046516 Bacteria 1692
261 Ga0495631_0011779 3300046518 Bacteria 4289
262 Ga0495648_0023817 3300046524 Bacteria 4182
263 Ga0495648_0054808 3300046524 Bacteria 2407
264 Ga0495652_0134366 3300046529 Bacteria 1954
265 Ga0495609_0017732 3300046538 Bacteria 3302
266 Ga0495609_0022047 3300046538 Bacteria 2936
267 Ga0495633_0000004 3300046558 Bacteria 370781
268 Ga0495633_0001237 3300046558 Bacteria 20458
269 Ga0495668_0000121 3300046616 Bacteria 116234
270 Ga0495668_0299879 3300046616 Bacteria 881
271 Ga0495625_0000105 3300046660 Bacteria 126078
272 Ga0495625_0013959 3300046660 Bacteria 6432
273 Ga0495625_0041047 3300046660 Bacteria 3369
274 Ga0495625_0057886 3300046660 Bacteria 2755
275 Ga0495625_0104840 3300046660 Bacteria 1938
276 Ga0495661_0000696 3300046665 Bacteria 33446
277 Ga0495661_0010010 3300046665 Bacteria 6483
278 Ga0495661_0022094 3300046665 Bacteria 4141
279 Ga0495658_0050049 3300046683 Bacteria 2362
280 Ga0495669_0184404 3300046684 Bacteria 995
281 Ga0495670_0216398 3300046691 Bacteria 1017
282 Ga0495671_0029476 3300046692 Bacteria 2818
283 Ga0495649_0000011 3300046694 Bacteria 416695
284 Ga0495649_0040460 3300046694 Bacteria 2553
285 Ga0495660_0018063 3300046810 Bacteria 4056
286 Ga0495683_0048753 3300047323 Bacteria 2123
287 Ga0495687_007055 3300047443 Bacteria 6716
288 Ga0495677_0138711 3300047445 Bacteria 933
289 Ga0495673_0063517 3300047469 Bacteria 1574
290 Ga0495686_0000931 3300047472 Bacteria 36438
291 Ga0495686_0001508 3300047472 Bacteria 25068
292 Ga0495686_0009937 3300047472 Bacteria 6812
293 Ga0495686_0018956 3300047472 Bacteria 4605
294 Ga0496115_0048472 3300048918 Bacteria 3398
295 Ga0496122_0000668 3300048925 Bacteria 69054
296 Ga0496123_0000728 3300048926 Bacteria 53516
297 Ga0495678_005747 3300049459 Bacteria 6740
298 Ga0495682_0026201 3300049460 Bacteria 2167
299 Ga0501241_015436 3300049758 Bacteria 1389
300 nmdc:mga0k408_1982_c1 3300050493 Bacteria 10985
301 nmdc:mga0k408_22418_c1 3300050493 Bacteria 3555
302 nmdc:mga0k408_65973_c1 3300050493 Bacteria 2108
303 nmdc:mga0k408_65_c1 3300050493 Bacteria 52329
304 Ga0500635_0000366 3300053080 Bacteria 14323
305 Ga0500635_0010049 3300053080 Bacteria 2646
306 Ga0500651_0000230 3300053093 Bacteria 34750
307 Ga0500608_009824 3300053122 Bacteria 4080
308 Ga0500618_000021 3300053125 Bacteria 160813
309 Ga0500618_013041 3300053125 Bacteria 2160
310 Ga0500652_102592 3300053131 Bacteria 1196
311 Ga0500622_0001690 3300053156 Bacteria 17179
312 Ga0500622_0205377 3300053156 Bacteria 893
313 Ga0500624_000124 3300053157 Bacteria 34718
314 2599480455 2599185184 Bacteria 6430550
315 2738755889 2738541283 Bacteria 7222293
316 2738761451 2738541284 Bacteria 5199923
317 2852625500 2852623160 Bacteria 4376875
318 2884934502 2884933994 Bacteria 4535041
319 2919188485 2919186247 Bacteria 6244071
320 2919439528 2919437846 Bacteria 6199444
321 2928081203 2928078545 Bacteria 6534839
322 2928150621 2928147474 Bacteria 6512076
323 2932088437 2932082852 Bacteria 6563563
324 2939667430 2939664404 Bacteria 6364494
325 2977234534 2977232053 Bacteria 5485925
326 Ga0209026_1011553
327 SwRhRL2b_contig_999397
328 JGI24736J21556_1005926
329 JGI24737J22298_10000064
330 JGI24737J22298_10018104
331 JGI24735J21928_10000011
332 JGI24735J21928_10032448
333 JGI24744J21845_10000395
334 JGI25162J39368_1001646
335 JGI25164J39214_1000591
336 JGI25165J46597_1000891
337 rootH2_10011517
338 rootH2_10024493
339 rootH1_10024559
340 rootH1_10067937
341 rootH1_10129592
342 rootH1_10272212
343 Ga0058862_11860513
344 Ga0065714_10004985
345 Ga0065714_10133393
346 Ga0065704_10070991
347 Ga0070658_10000008
348 Ga0070676_10001348
349 Ga0070683_100025840
350 Ga0070680_100006097
351 Ga0068868_100170617
352 Ga0070660_100042160
353 Ga0070674_100554239
354 Ga0070673_100006158
355 Ga0070659_100000090
356 Ga0070663_100022849
357 Ga0070678_100021776
358 Ga0070662_100000949
359 Ga0070681_10023647
360 Ga0068867_100004709
361 Ga0070684_100068061
362 Ga0068853_100617198
363 Ga0070665_100000118
364 Ga0068855_100000465
365 Ga0068855_100026491
366 Ga0068855_100148298
367 Ga0068855_100170402
368 Ga0068857_100081511
369 Ga0068854_100110099
370 Ga0068856_100000031
371 Ga0068856_100004967
372 Ga0068856_100025682
373 Ga0068856_100166378
374 Ga0068852_100016148
375 Ga0075366_10000886
376 Ga0075366_10017586
377 Ga0075366_10024010
378 Ga0097621_100000015
379 Ga0068871_100000051
380 Ga0068865_100000120
381 Ga0105240_10002497
382 Ga0105240_10008538
383 Ga0105240_10075885
384 Ga0105240_10088007
385 Ga0105240_10094517
386 Ga0105240_10163878
387 Ga0105240_10167420
388 Ga0105240_10175259
389 Ga0105240_10381541
390 Ga0105240_10720874
391 Ga0105245_10073351
392 Ga0105243_10023694
393 Ga0105241_10001237
394 Ga0105241_10001447
395 Ga0105241_10008119
396 Ga0105241_10101314
397 Ga0105241_10218250
398 Ga0105241_10271332
399 Ga0105241_10477441
400 Ga0105241_10655162
401 Ga0105237_10000749
402 Ga0105237_10000813
403 Ga0105237_10001172
404 Ga0105237_10007104
405 Ga0105237_10014486
406 Ga0105237_10128270
407 Ga0105237_10150142
408 Ga0105237_10161775
409 Ga0105238_10029852
410 Ga0105238_10095915
411 Ga0105239_10000045
412 Ga0105239_10000142
413 Ga0105239_10001311
414 Ga0105239_10008230
415 Ga0105239_10008439
416 Ga0105239_10073775
417 Ga0105239_10098723
418 Ga0105239_10130172
419 Ga0105239_10648902
420 Ga0105239_10911611
421 Ga0105246_10496979
422 Ga0157373_10000034
423 Ga0157373_10004245
424 Ga0157373_10042534
425 Ga0157373_10077711
426 Ga0157373_10078688
427 Ga0157371_10000789
428 Ga0157371_10005577
429 Ga0157371_10077504
430 Ga0157370_10001014
431 Ga0157370_10011031
432 Ga0157370_10034789
433 Ga0157370_10051757
434 Ga0157369_10007034
435 Ga0157369_10112364
436 Ga0157369_10310039
437 Ga0157369_10495911
438 Ga0157374_10000137
439 Ga0157374_10003839
440 Ga0157374_10010038
441 Ga0157374_10245928
442 Ga0157378_10056187
443 Ga0163162_10000012
444 Ga0163162_10104826
445 Ga0157372_10000041
446 Ga0157372_10000354
447 Ga0157372_10000632
448 Ga0157372_10094174
449 Ga0157372_10156783
450 Ga0157372_10437848
451 Ga0157372_10498547
452 Ga0157375_10056679
453 Ga0157375_10508174
454 Ga0157375_10608038
455 Ga0157375_11000479
456 Ga0182008_10000025
457 Ga0182008_10000058
458 Ga0182008_10029526
459 Ga0157377_10327176
460 Ga0182006_1000252
461 Ga0182007_10006728
462 Ga0182007_10021226
463 Ga0163161_10002909
464 Ga0163161_10003246
465 Ga0163161_10027052
466 Ga0207427_100071
467 Ga0209437_100021
468 Ga0209437_100144
469 Ga0209026_1000225
470 Ga0209148_1019311
471 Ga0209233_1000035
472 Ga0209233_1000466
473 Ga0209233_1019199
474 Ga0209455_1001509
475 Ga0207647_10008853
476 Ga0207645_10000058
477 Ga0207705_10000026
478 Ga0207705_10083376
479 Ga0207654_10005242
480 Ga0207654_10012585
481 Ga0207654_10026142
482 Ga0207654_10058460
483 Ga0207654_10084141
484 Ga0207695_10000179
485 Ga0207695_10006887
486 Ga0207695_10025813
487 Ga0207695_10033626
488 Ga0207695_10081525
489 Ga0207695_10195863
490 Ga0207671_10000769
491 Ga0207671_10002136
492 Ga0207671_10002470
493 Ga0207671_10004937
494 Ga0207671_10009263
495 Ga0207671_10052637
496 Ga0207671_10085820
497 Ga0207671_10204586
498 Ga0207657_10043077
499 Ga0207694_10053651
500 Ga0207694_10097682
501 Ga0207659_10511533
502 Ga0207644_10001300
503 Ga0207690_10000261
504 Ga0207690_10010247
505 Ga0207706_10000406
506 Ga0207704_10000353
507 Ga0207691_10097541
508 Ga0207661_10024127
509 Ga0207667_10000154
510 Ga0207667_10007838
511 Ga0207667_10014493
512 Ga0207667_10035516
513 Ga0207667_10151836
514 Ga0207667_10412840
515 Ga0207667_10667698
516 Ga0207651_10003306
517 Ga0207677_10084955
518 Ga0207639_10141576
519 Ga0207639_10546144
520 Ga0207678_10194919
521 Ga0207702_10000071
522 Ga0207702_10136322
523 Ga0207702_10256379
524 Ga0207648_10000458
525 Ga0207674_10045375
526 Ga0207683_10011696
527 Ga0207698_10001861
528 Ga0268266_10000121
529 Ga0307517_10001797
530 Ga0307515_10000077
531 Ga0307515_10013740
532 Ga0307515_10023132
533 Ga0307515_10106746
534 Ga0265338_10030640
535 Ga0307509_10053218
536 Ga0307408_100000209
537 Ga0307408_100000686
538 Ga0307408_100002081
539 Ga0307405_10012694
540 Ga0307412_10000001
541 Ga0307412_10002928
542 Ga0307412_10033949
543 Ga0307412_10584593
544 Ga0307414_10007889
545 Ga0307414_10013479
546 Ga0307414_10088471
547 Ga0307414_10095644
548 Ga0307414_10330773
549 Ga0307411_10035491
550 Ga0307507_10000143
551 Ga0307510_10023738
552 Ga0395899_0000011
553 Ga0395899_0000024
554 Ga0395899_0000269
555 Ga0395899_0054258
556 Ga0395900_0000140
557 Ga0395900_0000251
558 Ga0395900_0010899
559 Ga0395898_0013434
560 Ga0395898_0093759
561 Ga0395905_0000248
562 Ga0395905_0000829
563 Ga0395901_0000145
564 Ga0439448_0029148
565 Ga0466969_0108063
566 Ga0466966_0046796
567 Ga0466966_0207319
568 Ga0466961_0059203
569 Ga0495629_0027555
570 Ga0495638_0081926
571 Ga0495650_0000050
572 Ga0495605_0184146
573 Ga0495585_0000100
574 Ga0495585_0000248
575 Ga0495596_0082340
576 Ga0495607_0211878
577 Ga0495583_0010155
578 Ga0495606_0000036
579 Ga0495606_0007606
580 Ga0495606_0050169
581 Ga0495610_0001572
582 Ga0495616_0000271
583 Ga0495616_0004883
584 Ga0495628_0163302
585 Ga0495631_0011779
586 Ga0495648_0023817
587 Ga0495648_0054808
588 Ga0495652_0134366
589 Ga0495609_0017732
590 Ga0495609_0022047
591 Ga0495633_0000004
592 Ga0495633_0001237
593 Ga0495668_0000121
594 Ga0495668_0299879
595 Ga0495625_0000105
596 Ga0495625_0013959
597 Ga0495625_0041047
598 Ga0495625_0057886
599 Ga0495625_0104840
600 Ga0495661_0000696
601 Ga0495661_0010010
602 Ga0495661_0022094
603 Ga0495658_0050049
604 Ga0495669_0184404
605 Ga0495670_0216398
606 Ga0495671_0029476
607 Ga0495649_0000011
608 Ga0495649_0040460
609 Ga0495660_0018063
610 Ga0495683_0048753
611 Ga0495687_007055
612 Ga0495677_0138711
613 Ga0495673_0063517
614 Ga0495686_0000931
615 Ga0495686_0001508
616 Ga0495686_0009937
617 Ga0495686_0018956
618 Ga0496115_0048472
619 Ga0496122_0000668
620 Ga0496123_0000728
621 Ga0495678_005747
622 Ga0495682_0026201
623 Ga0501241_015436
624 nmdc:mga0k408_1982_c1
625 nmdc:mga0k408_22418_c1
626 nmdc:mga0k408_65973_c1
627 nmdc:mga0k408_65_c1
628 Ga0500635_0000366
629 Ga0500635_0010049
630 Ga0500651_0000230
631 Ga0500608_009824
632 Ga0500618_000021
633 Ga0500618_013041
634 Ga0500652_102592
635 Ga0500622_0001690
636 Ga0500622_0205377
637 Ga0500624_000124
638 2599480455
639 2738755889
640 2738761451
641 2852625500
642 2884934502
643 2919188485
644 2919439528
645 2928081203
646 2928150621
647 2932088437
648 2939667430
649 2977234534

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

14

216

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8466 33 150
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8317 33 150
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8208 33 151
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8078 33 151
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.7818 151 267
ID Description Score Start End Superfamily
1wyzA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9499 154 265 3.30.950.10
1wyzA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9331 154 265 3.30.950.10
af_A0A0R0K914_60_169_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.862 152 240 3.30.950.10
1wyzC01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8402 33 152 3.40.1010.10
3hh1C00 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8394 33 150 3.40.1010.10
ID Description Score Start End GO Terms
AF-A0A832MRT8-F1-model_v4 SAM-dependent methyltransferase 1.004 198 266 GO:0008168
GO:0032259
AF-A0A358G3A3-F1-model_v4 deleted 0.998 200 265
AF-A0A7C6MT16-F1-model_v4 deleted 0.9911 181 265
AF-A0A2N2Z0L0-F1-model_v4 SAM-dependent methyltransferase 0.9866 197 266 GO:0008168
GO:0032259
AF-A0A3C0NX83-F1-model_v4 SAM-dependent methyltransferase 0.9861 189 265 GO:0008168
GO:0032259

Map