F407808

General Info

Members Datasets Scaffolds Average Seq Length
325 205 650 320

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10162238|Ga0105248_101622383
Length 381
Sequence VTLNTSSWFEGLAPVNGGSGGRSNMPGIILQGLSMGNRRNHPNVRARRRWVRHGGRMNRRHFLHSSMAFSAASALGSGIVLSKANEPAPKPMDVAQFHAARKFADLPYGRIAYVERGRGAAALFLHGYPLNGYQWRGALDRLSTHRRCIAPDFLGLGYTEAPEGADLRPGTQMAMLAKLLDTLAEERVDIVANDSGGAVAQLFAAHYPKRVRTLLLTNCDANTDCPPKAISSLIEDARRGIAADKYVARPFKDHVLARSPQGLVGACFTYPDRFLDETLDCYLGAFAQSALRMRQYEQFAIALEKNVLVEIEPALKRFQSPVRILWGTADTIFSADSPDWLNRTFPSSRGVRRVEGAKLFWPEEFPDLIAEEARLLWGVHG

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
74 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
77 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
79 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
80 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
127 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
128 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
129 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
132 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
133 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
134 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
137 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
143 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
144 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
145 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
146 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
147 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
148 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
149 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
150 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
153 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
154 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
155 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
156 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
157 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
158 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
173 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
174 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
178 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
179 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
185 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
186 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
187 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
190 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
193 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
194 2643221559 Lysobacter sp. Root559 Isolate Unclassified
195 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
196 2643221573 Lysobacter sp. Root604 Isolate Unclassified
197 2643221586 Lysobacter sp. Root667 Isolate Unclassified
198 2643221593 Lysobacter sp. Root690 Isolate Unclassified
199 2643221612 Lysobacter sp. Root76 Isolate Unclassified
200 2643221638 Duganella sp. Root336D2 Isolate Unclassified
201 2643221720 Lysobacter sp. Root916 Isolate Unclassified
202 2643221727 Lysobacter sp. Root96 Isolate Unclassified
203 2643221728 Lysobacter sp. Root983 Isolate Unclassified
204 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
205 2884411467 Dyella sp. AD56 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.08
Metatranscriptomes 0.62
Isolates 4.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.92
Nodule 0.62
Rhizoplane 3.69
Rhizosphere 63.69
Stem 0
Stem Tuber 0
Unclassified 4.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10162238 3300009177 Bacteria 2520
2 JGI24737J22298_10053729 3300001990 Bacteria 1220
3 JGI25156J39149_1004353 3300002705 Bacteria 4341
4 JGI25157J39369_1000380 3300002741 Bacteria 30640
5 JGI25159J45721_1003576 3300002987 Bacteria 5441
6 JGI25153J46596_10017473 3300003215 Bacteria 2825
7 rootH2_10018587 3300003320 Bacteria 3046
8 rootL2_10064909 3300003322 Bacteria 1602
9 JGI25161J50226_1002058 3300003374 Bacteria 5469
10 Ga0006562J51391_1052789 3300003578 Bacteria 11811
11 Ga0006562J51391_1052792 3300003578 Bacteria 3330
12 Ga0055525_1000009 3300003759 Bacteria 596899
13 Ga0055525_1000018 3300003759 Bacteria 393974
14 Ga0055524_1000017 3300003775 Bacteria 235608
15 Ga0055524_1002703 3300003775 Bacteria 8961
16 Ga0055530_10005181 3300003791 Bacteria 6346
17 Ga0055543_1002803 3300004625 Bacteria 5507
18 Ga0065165_1008056 3300005262 Bacteria 5029
19 Ga0065165_1009774 3300005262 Bacteria 4242
20 Ga0065165_1022121 3300005262 Bacteria 2189
21 Ga0070683_100057313 3300005329 Unclassified 3619
22 Ga0070666_10000001 3300005335 Bacteria 543080
23 Ga0070680_100042992 3300005336 Unclassified 3669
24 Ga0070691_10211149 3300005341 Bacteria 1024
25 Ga0070668_100001417 3300005347 Bacteria 17279
26 Ga0070669_100025983 3300005353 Bacteria 4211
27 Ga0070659_100012681 3300005366 Bacteria 6254
28 Ga0070659_100201011 3300005366 Bacteria 1640
29 Ga0070667_100000005 3300005367 Bacteria 347268
30 Ga0070667_100032976 3300005367 Bacteria 4323
31 Ga0070714_100000125 3300005435 Bacteria 60871
32 Ga0070713_100105630 3300005436 Unclassified 2446
33 Ga0070694_100069888 3300005444 Bacteria 2416
34 Ga0070708_100003625 3300005445 Bacteria 12110
35 Ga0070663_100000107 3300005455 Bacteria 38699
36 Ga0070662_100033517 3300005457 Bacteria 3617
37 Ga0070681_10113390 3300005458 Bacteria 2650
38 Ga0070685_10160718 3300005466 Bacteria 1431
39 Ga0070699_100016635 3300005518 Bacteria 6314
40 Ga0070679_100010339 3300005530 Bacteria 8848
41 Ga0070679_100291647 3300005530 Bacteria 1583
42 Ga0070679_100383667 3300005530 Bacteria 1352
43 Ga0068853_100006444 3300005539 Bacteria 9329
44 Ga0068853_100410216 3300005539 Bacteria 1269
45 Ga0070696_100010923 3300005546 Bacteria 6085
46 Ga0070665_100510612 3300005548 Unclassified 1213
47 Ga0068855_100033346 3300005563 Bacteria 6145
48 Ga0068855_100036454 3300005563 Bacteria 5853
49 Ga0068857_100003524 3300005577 Bacteria 13081
50 Ga0068857_100012836 3300005577 Bacteria 7300
51 Ga0068857_100068441 3300005577 Bacteria 3160
52 Ga0068854_100001931 3300005578 Bacteria 12640
53 Ga0068854_100007263 3300005578 Bacteria 7075
54 Ga0068856_100103770 3300005614 Bacteria 2836
55 Ga0068864_100176078 3300005618 Bacteria 1953
56 Ga0068861_100000442 3300005719 Bacteria 24072
57 Ga0068851_10001135 3300005834 Bacteria 11529
58 Ga0068863_100041165 3300005841 Bacteria 4392
59 Ga0068858_100038463 3300005842 Bacteria 4438
60 Ga0068860_100100596 3300005843 Unclassified 2758
61 Ga0068862_100000896 3300005844 Bacteria 28924
62 Ga0075367_10010009 3300006178 Bacteria 4971
63 Ga0075428_100001312 3300006844 Bacteria 26332
64 Ga0075428_100210751 3300006844 Bacteria 2099
65 Ga0075430_100004009 3300006846 Bacteria 12422
66 Ga0075431_100000002 3300006847 Bacteria 153069
67 Ga0075431_100000117 3300006847 Bacteria 51316
68 Ga0075431_100003109 3300006847 Bacteria 16073
69 Ga0075431_100327148 3300006847 Bacteria 1545
70 Ga0075429_100008173 3300006880 Bacteria 9094
71 Ga0075429_100021213 3300006880 Bacteria 5631
72 Ga0075429_100032841 3300006880 Bacteria 4511
73 Ga0075429_100051620 3300006880 Bacteria 3578
74 Ga0068865_100006561 3300006881 Bacteria 7112
75 Ga0099826_10000033 3300006948 Bacteria 120668
76 Ga0105240_10001284 3300009093 Bacteria 43463
77 Ga0105240_10007434 3300009093 Bacteria 15915
78 Ga0105240_10016257 3300009093 Bacteria 10082
79 Ga0105240_10034102 3300009093 Bacteria 6568
80 Ga0105240_10051535 3300009093 Bacteria 5177
81 Ga0111539_10005677 3300009094 Bacteria 16145
82 Ga0111539_10008991 3300009094 Bacteria 12644
83 Ga0105245_10000374 3300009098 Bacteria 41635
84 Ga0114129_10002358 3300009147 Bacteria 26209
85 Ga0105241_10067157 3300009174 Bacteria 2775
86 Ga0105241_10317710 3300009174 Bacteria 1342
87 Ga0105237_10000079 3300009545 Bacteria 127925
88 Ga0105237_10022296 3300009545 Bacteria 6498
89 Ga0105237_10046690 3300009545 Bacteria 4356
90 Ga0105237_10254156 3300009545 Bacteria 1760
91 Ga0105237_10287070 3300009545 Unclassified 1648
92 Ga0105238_10000513 3300009551 Bacteria 40634
93 Ga0105249_10000152 3300009553 Bacteria 86970
94 Ga0105249_10002255 3300009553 Bacteria 16733
95 Ga0105249_10031659 3300009553 Bacteria 4784
96 Ga0157314_1000015 3300012500 Bacteria 16778
97 Ga0157370_10009255 3300013104 Bacteria 10555
98 Ga0157369_10187019 3300013105 Bacteria 2178
99 Ga0163162_10003424 3300013306 Bacteria 15149
100 Ga0157372_10039919 3300013307 Bacteria 5183
101 Ga0157372_10270588 3300013307 Bacteria 1974
102 Ga0157372_10305057 3300013307 Bacteria 1852
103 Ga0157372_10388706 3300013307 Bacteria 1626
104 Ga0157380_10353747 3300014326 Bacteria 1375
105 Ga0182008_10022028 3300014497 Bacteria 3265
106 Ga0157379_10035950 3300014968 Unclassified 4417
107 Ga0157379_10096743 3300014968 Bacteria 2650
108 Ga0182006_1010759 3300015261 Bacteria 4052
109 Ga0182007_10029446 3300015262 Bacteria 1880
110 Ga0209436_102721 3300025208 Bacteria 5093
111 Ga0209436_108051 3300025208 Bacteria 2138
112 Ga0209563_100011 3300025230 Bacteria 1187808
113 Ga0209258_100532 3300025242 Bacteria 36187
114 Ga0209026_1000087 3300025250 Bacteria 184044
115 Ga0209148_1000237 3300025254 Bacteria 88748
116 Ga0209759_1001004 3300025256 Bacteria 19237
117 Ga0209129_1002497 3300025258 Bacteria 8970
118 Ga0209565_1002817 3300025263 Bacteria 6006
119 Ga0209565_1002966 3300025263 Bacteria 5759
120 Ga0209565_1004551 3300025263 Bacteria 4194
121 Ga0209565_1005482 3300025263 Bacteria 3685
122 Ga0209565_1023280 3300025263 Bacteria 1273
123 Ga0209130_1001197 3300025284 Bacteria 18438
124 Ga0209130_1007160 3300025284 Bacteria 3495
125 Ga0209675_1020360 3300025291 Bacteria 1800
126 Ga0209675_1020363 3300025291 Bacteria 1800
127 Ga0209676_1008124 3300025292 Bacteria 4755
128 Ga0209025_1000005 3300025294 Bacteria 1272149
129 Ga0209564_1000087 3300025295 Bacteria 250787
130 Ga0209564_1005972 3300025295 Bacteria 6737
131 Ga0209758_1000444 3300025297 Bacteria 69208
132 Ga0209758_1004731 3300025297 Bacteria 11083
133 Ga0209758_1012221 3300025297 Bacteria 4833
134 Ga0209050_1000219 3300025298 Bacteria 128416
135 Ga0209050_1008534 3300025298 Bacteria 5449
136 Ga0209256_1000018 3300025299 Bacteria 568467
137 Ga0209256_1003267 3300025299 Bacteria 11629
138 Ga0209256_1007670 3300025299 Bacteria 5244
139 Ga0209256_1007671 3300025299 Bacteria 5244
140 Ga0209051_1013342 3300025303 Bacteria 3917
141 Ga0209257_1003653 3300025304 Bacteria 12906
142 Ga0209257_1008789 3300025304 Bacteria 5611
143 Ga0207656_10004625 3300025321 Bacteria 4821
144 Ga0207680_10000003 3300025903 Bacteria 925264
145 Ga0207647_10004772 3300025904 Bacteria 10036
146 Ga0207647_10018833 3300025904 Bacteria 4655
147 Ga0207643_10080106 3300025908 Bacteria 1891
148 Ga0207705_10036446 3300025909 Bacteria 3520
149 Ga0207707_10295421 3300025912 Bacteria 1401
150 Ga0207695_10000401 3300025913 Bacteria 96946
151 Ga0207695_10000541 3300025913 Bacteria 78696
152 Ga0207695_10013507 3300025913 Bacteria 9733
153 Ga0207695_10115947 3300025913 Bacteria 2653
154 Ga0207671_10000009 3300025914 Bacteria 724862
155 Ga0207671_10004802 3300025914 Bacteria 12729
156 Ga0207671_10054143 3300025914 Bacteria 2973
157 Ga0207671_10160894 3300025914 Bacteria 1739
158 Ga0207657_10020205 3300025919 Bacteria 6300
159 Ga0207657_10044793 3300025919 Bacteria 3887
160 Ga0207681_10004361 3300025923 Bacteria 8727
161 Ga0207694_10000151 3300025924 Bacteria 71870
162 Ga0207694_10394597 3300025924 Bacteria 1150
163 Ga0207687_10000776 3300025927 Bacteria 21534
164 Ga0207700_10398946 3300025928 Unclassified 1205
165 Ga0207664_10001452 3300025929 Bacteria 15566
166 Ga0207644_10012055 3300025931 Bacteria 5733
167 Ga0207690_10004754 3300025932 Bacteria 8016
168 Ga0207690_10035040 3300025932 Bacteria 3238
169 Ga0207706_10001625 3300025933 Bacteria 22292
170 Ga0207711_10000255 3300025941 Bacteria 57619
171 Ga0207667_10000077 3300025949 Bacteria 166095
172 Ga0207667_10000261 3300025949 Bacteria 73194
173 Ga0207667_10144323 3300025949 Bacteria 2451
174 Ga0207667_10199046 3300025949 Bacteria 2055
175 Ga0207712_10000088 3300025961 Bacteria 106461
176 Ga0207712_10004598 3300025961 Bacteria 8716
177 Ga0207668_10002596 3300025972 Bacteria 10565
178 Ga0207640_10000032 3300025981 Bacteria 116582
179 Ga0207640_10000146 3300025981 Bacteria 51504
180 Ga0207658_10000006 3300025986 Bacteria 392309
181 Ga0207703_10139027 3300026035 Bacteria 2106
182 Ga0207639_10033768 3300026041 Bacteria 3776
183 Ga0207678_10015891 3300026067 Bacteria 6613
184 Ga0207641_10031152 3300026088 Bacteria 4422
185 Ga0207674_10000551 3300026116 Bacteria 49136
186 Ga0207674_10024614 3300026116 Bacteria 6430
187 Ga0207674_10117866 3300026116 Bacteria 2625
188 Ga0207675_100000046 3300026118 Bacteria 87216
189 Ga0207698_10419017 3300026142 Bacteria 1284
190 Ga0209282_1000014 3300027666 Bacteria 207318
191 Ga0207428_10009413 3300027907 Bacteria 8758
192 Ga0207428_10040356 3300027907 Bacteria 3787
193 Ga0268266_10000011 3300028379 Bacteria 757403
194 Ga0268265_10001184 3300028380 Bacteria 22821
195 Ga0268264_10062209 3300028381 Bacteria 3134
196 Ga0265334_10003718 3300028573 Bacteria 6905
197 Ga0265334_10007386 3300028573 Unclassified 4713
198 Ga0307517_10072342 3300028786 Bacteria 3075
199 Ga0307517_10085729 3300028786 Bacteria 2636
200 Ga0307511_10043489 3300030521 Unclassified 3753
201 Ga0265331_10012623 3300031250 Bacteria 4568
202 Ga0265331_10016701 3300031250 Unclassified 3846
203 Ga0307513_10040077 3300031456 Bacteria 5183
204 Ga0307509_10000011 3300031507 Bacteria 298257
205 Ga0307509_10001290 3300031507 Bacteria 42541
206 Ga0265314_10094876 3300031711 Bacteria 1933
207 Ga0307516_10083236 3300031730 Bacteria 3041
208 Ga0307518_10056330 3300031838 Bacteria 2856
209 Ga0307416_100389560 3300032002 Bacteria 1427
210 Ga0307510_10003183 3300033180 Bacteria 19050
211 Ga0395899_0000106 3300037312 Bacteria 144668
212 Ga0395899_0013626 3300037312 Bacteria 6216
213 Ga0395899_0015573 3300037312 Bacteria 5798
214 Ga0395899_0156478 3300037312 Bacteria 1612
215 Ga0395900_0000049 3300037418 Bacteria 226847
216 Ga0395900_0004942 3300037418 Bacteria 14036
217 Ga0395900_0057328 3300037418 Bacteria 4010
218 Ga0395900_0092211 3300037418 Bacteria 3112
219 Ga0395898_0000110 3300037466 Bacteria 217100
220 Ga0395898_0147309 3300037466 Bacteria 2253
221 Ga0395898_0467452 3300037466 Bacteria 1200
222 Ga0395905_0001911 3300037471 Bacteria 23953
223 Ga0395905_0033035 3300037471 Bacteria 4864
224 Ga0395905_0277018 3300037471 Bacteria 1563
225 Ga0395901_0064357 3300038443 Bacteria 3817
226 Ga0395901_0219187 3300038443 Bacteria 1989
227 Ga0395901_0401788 3300038443 Bacteria 1407
228 Ga0436365_0683824 3300039437 Bacteria 1499
229 Ga0466969_0078821 3300044656 Bacteria 1575
230 Ga0466982_0000006 3300044672 Bacteria 333931
231 Ga0466966_0001281 3300044684 Bacteria 16098
232 Ga0466966_0009071 3300044684 Bacteria 6591
233 Ga0466966_0019072 3300044684 Bacteria 4519
234 Ga0466966_0066693 3300044684 Bacteria 2261
235 Ga0466966_0119269 3300044684 Bacteria 1621
236 Ga0466961_0005755 3300044693 Bacteria 7845
237 Ga0466961_0097602 3300044693 Bacteria 1852
238 Ga0466964_0003608 3300044706 Bacteria 5657
239 Ga0466964_0055010 3300044706 Bacteria 1642
240 Ga0466971_0019741 3300044719 Bacteria 2994
241 Ga0466971_0022345 3300044719 Unclassified 2818
242 Ga0466971_0070186 3300044719 Bacteria 1590
243 Ga0466970_0022683 3300044765 Bacteria 3275
244 Ga0466970_0075301 3300044765 Bacteria 1818
245 Ga0466970_0140771 3300044765 Bacteria 1329
246 Ga0466957_0005949 3300044842 Bacteria 6876
247 Ga0466959_0000022 3300045049 Bacteria 125849
248 Ga0466959_0004006 3300045049 Bacteria 9782
249 Ga0466959_0024210 3300045049 Bacteria 4495
250 Ga0466959_0089462 3300045049 Bacteria 2212
251 Ga0466958_0063914 3300045836 Bacteria 2245
252 Ga0466958_0191207 3300045836 Bacteria 1301
253 Ga0466967_0136721 3300045976 Bacteria 2279
254 Ga0466967_0348607 3300045976 Bacteria 1433
255 Ga0495650_0000222 3300046471 Bacteria 118200
256 Ga0495642_0002081 3300046528 Bacteria 8289
257 Ga0495645_0050959 3300046543 Bacteria 3012
258 Ga0495625_0107471 3300046660 Bacteria 1910
259 Ga0495588_0000142 3300046674 Bacteria 104418
260 Ga0496101_0140240 3300048904 Bacteria 1842
261 Ga0496102_0069519 3300048905 Bacteria 3232
262 Ga0496102_0317046 3300048905 Bacteria 1469
263 Ga0496103_0148208 3300048906 Bacteria 1503
264 Ga0496104_0152430 3300048907 Bacteria 2218
265 Ga0496106_0003792 3300048909 Bacteria 11265
266 Ga0496106_0022708 3300048909 Bacteria 4662
267 Ga0496107_0029443 3300048910 Bacteria 3906
268 Ga0496112_0083639 3300048915 Bacteria 3157
269 Ga0496112_0227179 3300048915 Bacteria 1822
270 Ga0496113_0033631 3300048916 Bacteria 3735
271 Ga0496113_0108947 3300048916 Bacteria 2153
272 Ga0496116_0005975 3300048919 Bacteria 11162
273 Ga0496117_0000110 3300048920 Bacteria 184627
274 Ga0496118_0000014 3300048921 Bacteria 561628
275 Ga0496118_0000219 3300048921 Bacteria 99957
276 Ga0496120_0016125 3300048923 Bacteria 4894
277 Ga0496121_0003805 3300048924 Bacteria 21037
278 Ga0496121_0024053 3300048924 Bacteria 5837
279 Ga0496121_0126970 3300048924 Unclassified 1916
280 Ga0496121_0230194 3300048924 Unclassified 1299
281 Ga0496121_0265209 3300048924 Unclassified 1183
282 Ga0496122_0000503 3300048925 Bacteria 80947
283 Ga0496122_0005269 3300048925 Bacteria 15493
284 Ga0496123_0000813 3300048926 Bacteria 50361
285 Ga0496124_0017658 3300048927 Bacteria 6717
286 Ga0496125_0001958 3300048928 Bacteria 28063
287 Ga0496125_0011956 3300048928 Bacteria 8644
288 Ga0496126_0026462 3300048929 Bacteria 5562
289 Ga0496126_0043853 3300048929 Bacteria 4122
290 Ga0495678_002279 3300049459 Bacteria 13319
291 Ga0501227_006818 3300049665 Bacteria 2450
292 nmdc:mga06z11_11169_c1 3300050494 Bacteria 3860
293 nmdc:mga05p37_24931_c1 3300050507 Bacteria 7270
294 nmdc:mga09592_168374_c1 3300050508 Bacteria 1894
295 nmdc:mga09592_18369_c1 3300050508 Bacteria 5734
296 nmdc:mga06r32_2155_c1 3300050510 Bacteria 17615
297 nmdc:mga06r32_45198_c1 3300050510 Bacteria 4197
298 nmdc:mga06r32_59_c1 3300050510 Bacteria 70317
299 nmdc:mga08y16_138042_c1 3300050511 Bacteria 2535
300 nmdc:mga08y16_3064_c1 3300050511 Bacteria 17273
301 Ga0500555_000068 3300053103 Bacteria 52032
302 Ga0500555_000570 3300053103 Bacteria 14585
303 Ga0500595_054804 3300053119 Bacteria 1223
304 Ga0500597_000259 3300053120 Bacteria 10858
305 Ga0500597_002527 3300053120 Bacteria 5107
306 Ga0500588_0006104 3300053146 Bacteria 2710
307 Ga0500616_0000202 3300053153 Bacteria 97657
308 Ga0500637_0029092 3300053178 Bacteria 3063
309 Ga0500645_000036 3300053730 Bacteria 113063
310 Ga0500645_000507 3300053730 Bacteria 26241
311 Ga0466962_0000952 3300061719 Bacteria 13127
312 2538832938 2537561836 Bacteria 3910579
313 2643790935 2643221554 Bacteria 6603920
314 2643817031 2643221559 Bacteria 4424915
315 2643830798 2643221562 Bacteria 4048635
316 2643881315 2643221573 Bacteria 4784121
317 2643939453 2643221586 Bacteria 4446529
318 2643975993 2643221593 Bacteria 6296053
319 2644078132 2643221612 Bacteria 4361984
320 2644214927 2643221638 Bacteria 6579467
321 2644662088 2643221720 Bacteria 4694283
322 2644696435 2643221727 Bacteria 4415595
323 2644700227 2643221728 Bacteria 4797149
324 2852683607 2852680915 Bacteria 4100189
325 2884414193 2884411467 Bacteria 5246714
326 Ga0105248_10162238
327 JGI24737J22298_10053729
328 JGI25156J39149_1004353
329 JGI25157J39369_1000380
330 JGI25159J45721_1003576
331 JGI25153J46596_10017473
332 rootH2_10018587
333 rootL2_10064909
334 JGI25161J50226_1002058
335 Ga0006562J51391_1052789
336 Ga0006562J51391_1052792
337 Ga0055525_1000009
338 Ga0055525_1000018
339 Ga0055524_1000017
340 Ga0055524_1002703
341 Ga0055530_10005181
342 Ga0055543_1002803
343 Ga0065165_1008056
344 Ga0065165_1009774
345 Ga0065165_1022121
346 Ga0070683_100057313
347 Ga0070666_10000001
348 Ga0070680_100042992
349 Ga0070691_10211149
350 Ga0070668_100001417
351 Ga0070669_100025983
352 Ga0070659_100012681
353 Ga0070659_100201011
354 Ga0070667_100000005
355 Ga0070667_100032976
356 Ga0070714_100000125
357 Ga0070713_100105630
358 Ga0070694_100069888
359 Ga0070708_100003625
360 Ga0070663_100000107
361 Ga0070662_100033517
362 Ga0070681_10113390
363 Ga0070685_10160718
364 Ga0070699_100016635
365 Ga0070679_100010339
366 Ga0070679_100291647
367 Ga0070679_100383667
368 Ga0068853_100006444
369 Ga0068853_100410216
370 Ga0070696_100010923
371 Ga0070665_100510612
372 Ga0068855_100033346
373 Ga0068855_100036454
374 Ga0068857_100003524
375 Ga0068857_100012836
376 Ga0068857_100068441
377 Ga0068854_100001931
378 Ga0068854_100007263
379 Ga0068856_100103770
380 Ga0068864_100176078
381 Ga0068861_100000442
382 Ga0068851_10001135
383 Ga0068863_100041165
384 Ga0068858_100038463
385 Ga0068860_100100596
386 Ga0068862_100000896
387 Ga0075367_10010009
388 Ga0075428_100001312
389 Ga0075428_100210751
390 Ga0075430_100004009
391 Ga0075431_100000002
392 Ga0075431_100000117
393 Ga0075431_100003109
394 Ga0075431_100327148
395 Ga0075429_100008173
396 Ga0075429_100021213
397 Ga0075429_100032841
398 Ga0075429_100051620
399 Ga0068865_100006561
400 Ga0099826_10000033
401 Ga0105240_10001284
402 Ga0105240_10007434
403 Ga0105240_10016257
404 Ga0105240_10034102
405 Ga0105240_10051535
406 Ga0111539_10005677
407 Ga0111539_10008991
408 Ga0105245_10000374
409 Ga0114129_10002358
410 Ga0105241_10067157
411 Ga0105241_10317710
412 Ga0105237_10000079
413 Ga0105237_10022296
414 Ga0105237_10046690
415 Ga0105237_10254156
416 Ga0105237_10287070
417 Ga0105238_10000513
418 Ga0105249_10000152
419 Ga0105249_10002255
420 Ga0105249_10031659
421 Ga0157314_1000015
422 Ga0157370_10009255
423 Ga0157369_10187019
424 Ga0163162_10003424
425 Ga0157372_10039919
426 Ga0157372_10270588
427 Ga0157372_10305057
428 Ga0157372_10388706
429 Ga0157380_10353747
430 Ga0182008_10022028
431 Ga0157379_10035950
432 Ga0157379_10096743
433 Ga0182006_1010759
434 Ga0182007_10029446
435 Ga0209436_102721
436 Ga0209436_108051
437 Ga0209563_100011
438 Ga0209258_100532
439 Ga0209026_1000087
440 Ga0209148_1000237
441 Ga0209759_1001004
442 Ga0209129_1002497
443 Ga0209565_1002817
444 Ga0209565_1002966
445 Ga0209565_1004551
446 Ga0209565_1005482
447 Ga0209565_1023280
448 Ga0209130_1001197
449 Ga0209130_1007160
450 Ga0209675_1020360
451 Ga0209675_1020363
452 Ga0209676_1008124
453 Ga0209025_1000005
454 Ga0209564_1000087
455 Ga0209564_1005972
456 Ga0209758_1000444
457 Ga0209758_1004731
458 Ga0209758_1012221
459 Ga0209050_1000219
460 Ga0209050_1008534
461 Ga0209256_1000018
462 Ga0209256_1003267
463 Ga0209256_1007670
464 Ga0209256_1007671
465 Ga0209051_1013342
466 Ga0209257_1003653
467 Ga0209257_1008789
468 Ga0207656_10004625
469 Ga0207680_10000003
470 Ga0207647_10004772
471 Ga0207647_10018833
472 Ga0207643_10080106
473 Ga0207705_10036446
474 Ga0207707_10295421
475 Ga0207695_10000401
476 Ga0207695_10000541
477 Ga0207695_10013507
478 Ga0207695_10115947
479 Ga0207671_10000009
480 Ga0207671_10004802
481 Ga0207671_10054143
482 Ga0207671_10160894
483 Ga0207657_10020205
484 Ga0207657_10044793
485 Ga0207681_10004361
486 Ga0207694_10000151
487 Ga0207694_10394597
488 Ga0207687_10000776
489 Ga0207700_10398946
490 Ga0207664_10001452
491 Ga0207644_10012055
492 Ga0207690_10004754
493 Ga0207690_10035040
494 Ga0207706_10001625
495 Ga0207711_10000255
496 Ga0207667_10000077
497 Ga0207667_10000261
498 Ga0207667_10144323
499 Ga0207667_10199046
500 Ga0207712_10000088
501 Ga0207712_10004598
502 Ga0207668_10002596
503 Ga0207640_10000032
504 Ga0207640_10000146
505 Ga0207658_10000006
506 Ga0207703_10139027
507 Ga0207639_10033768
508 Ga0207678_10015891
509 Ga0207641_10031152
510 Ga0207674_10000551
511 Ga0207674_10024614
512 Ga0207674_10117866
513 Ga0207675_100000046
514 Ga0207698_10419017
515 Ga0209282_1000014
516 Ga0207428_10009413
517 Ga0207428_10040356
518 Ga0268266_10000011
519 Ga0268265_10001184
520 Ga0268264_10062209
521 Ga0265334_10003718
522 Ga0265334_10007386
523 Ga0307517_10072342
524 Ga0307517_10085729
525 Ga0307511_10043489
526 Ga0265331_10012623
527 Ga0265331_10016701
528 Ga0307513_10040077
529 Ga0307509_10000011
530 Ga0307509_10001290
531 Ga0265314_10094876
532 Ga0307516_10083236
533 Ga0307518_10056330
534 Ga0307416_100389560
535 Ga0307510_10003183
536 Ga0395899_0000106
537 Ga0395899_0013626
538 Ga0395899_0015573
539 Ga0395899_0156478
540 Ga0395900_0000049
541 Ga0395900_0004942
542 Ga0395900_0057328
543 Ga0395900_0092211
544 Ga0395898_0000110
545 Ga0395898_0147309
546 Ga0395898_0467452
547 Ga0395905_0001911
548 Ga0395905_0033035
549 Ga0395905_0277018
550 Ga0395901_0064357
551 Ga0395901_0219187
552 Ga0395901_0401788
553 Ga0436365_0683824
554 Ga0466969_0078821
555 Ga0466982_0000006
556 Ga0466966_0001281
557 Ga0466966_0009071
558 Ga0466966_0019072
559 Ga0466966_0066693
560 Ga0466966_0119269
561 Ga0466961_0005755
562 Ga0466961_0097602
563 Ga0466964_0003608
564 Ga0466964_0055010
565 Ga0466971_0019741
566 Ga0466971_0022345
567 Ga0466971_0070186
568 Ga0466970_0022683
569 Ga0466970_0075301
570 Ga0466970_0140771
571 Ga0466957_0005949
572 Ga0466959_0000022
573 Ga0466959_0004006
574 Ga0466959_0024210
575 Ga0466959_0089462
576 Ga0466958_0063914
577 Ga0466958_0191207
578 Ga0466967_0136721
579 Ga0466967_0348607
580 Ga0495650_0000222
581 Ga0495642_0002081
582 Ga0495645_0050959
583 Ga0495625_0107471
584 Ga0495588_0000142
585 Ga0496101_0140240
586 Ga0496102_0069519
587 Ga0496102_0317046
588 Ga0496103_0148208
589 Ga0496104_0152430
590 Ga0496106_0003792
591 Ga0496106_0022708
592 Ga0496107_0029443
593 Ga0496112_0083639
594 Ga0496112_0227179
595 Ga0496113_0033631
596 Ga0496113_0108947
597 Ga0496116_0005975
598 Ga0496117_0000110
599 Ga0496118_0000014
600 Ga0496118_0000219
601 Ga0496120_0016125
602 Ga0496121_0003805
603 Ga0496121_0024053
604 Ga0496121_0126970
605 Ga0496121_0230194
606 Ga0496121_0265209
607 Ga0496122_0000503
608 Ga0496122_0005269
609 Ga0496123_0000813
610 Ga0496124_0017658
611 Ga0496125_0001958
612 Ga0496125_0011956
613 Ga0496126_0026462
614 Ga0496126_0043853
615 Ga0495678_002279
616 Ga0501227_006818
617 nmdc:mga06z11_11169_c1
618 nmdc:mga05p37_24931_c1
619 nmdc:mga09592_168374_c1
620 nmdc:mga09592_18369_c1
621 nmdc:mga06r32_2155_c1
622 nmdc:mga06r32_45198_c1
623 nmdc:mga06r32_59_c1
624 nmdc:mga08y16_138042_c1
625 nmdc:mga08y16_3064_c1
626 Ga0500555_000068
627 Ga0500555_000570
628 Ga0500595_054804
629 Ga0500597_000259
630 Ga0500597_002527
631 Ga0500588_0006104
632 Ga0500616_0000202
633 Ga0500637_0029092
634 Ga0500645_000036
635 Ga0500645_000507
636 Ga0466962_0000952
637 2538832938
638 2643790935
639 2643817031
640 2643830798
641 2643881315
642 2643939453
643 2643975993
644 2644078132
645 2644214927
646 2644662088
647 2644696435
648 2644700227
649 2852683607
650 2884414193

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

122

361

0.77

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

122

372

0.62

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b6p-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 154-156 (cphalotag7_154-156) 0.9132 49 167
8b6p-assembly2.cif.gz_B x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 154-156 (cphalotag7_154-156) 0.9122 49 167
6u2m-assembly2.cif.gz_C crystal structure of a halotag-based calcium indicator, halocamp v2, bound to jf635 0.9001 49 159
8b6n-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 141-156 (cphalotagdelta) 0.8969 49 159
5w15-assembly1.cif.gz_D-3 crystal structure of an alpha/beta hydrolase fold protein from burkholderia ambifaria. 0.8739 36 318
ID Description Score Start End Superfamily
af_A0A0R0EQP0_201_384_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9122 67 169 3.40.50.1820
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.893 50 321 3.40.50.1820
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8869 50 321 3.40.50.1820
af_Q10QZ0_32_236_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8684 59 173 3.40.50.1820
af_Q9NQF3_11_190_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8666 49 169 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A2A5EV15-F1-model_v4 Hydrolase 0.9791 37 323 GO:0016787
AF-A0A4Q4CPA1-F1-model_v4 Alpha/beta fold hydrolase 0.9739 49 160 GO:0016020
GO:0046464
GO:0047372
AF-A0A2A5EV15-F1-model_v4 Hydrolase 0.9594 37 323 GO:0016787
AF-A0A2N5ZB42-F1-model_v4 Alpha/beta hydrolase 0.9546 48 151 GO:0016020
GO:0016787
AF-A0A6I3ADN2-F1-model_v4 deleted 0.9426 49 168

Map