F408690

General Info

Members Datasets Scaffolds Average Seq Length
327 196 654 346

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100167268|Ga0068855_1001672682
Length 359
Sequence VFKFITKRLFYGLLVLLGVNTLVFLLFNILPGDPARLILGQRADQESIDAINKDLGRDKPVFTQYLMYINDLSPLSVHETINKEHYLYLDSAKYTSYQKLFSVSETKILVLKYPYLRRSYVSKRKVLDIIVDTFPETALLAFSSIAFASFWGIIIGIFSAVNKNGLFDKLASIFSVLGMALPSFFIGLILSWFFGFILRDYTGLNHVGSLFVTDDFGEEHLVLKNLILPSLTLGLRPLSIIIQLMRNSLLDELSADYIRTATAKGLTFYAVIFKHALKNALNPVITAISGWFSGLMAGAAFVEVVFNWKGIGYEVVDALNKNDLPVVMGTTIIFAMVFVIINICVDIIYGVLDPRVRYD

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
87 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
129 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
130 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
131 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
132 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
133 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
134 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
141 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
178 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
179 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
180 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
184 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 2818991444 Filimonas endophytica 3197 Isolate Unclassified
189 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
190 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
191 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
192 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
193 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
194 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
195 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
196 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.25
Metatranscriptomes 0
Isolates 2.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.54
Nodule 0
Rhizoplane 0.92
Rhizosphere 80.73
Stem 0
Stem Tuber 0
Unclassified 9.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100167268 3300005563 Bacteria 2492
2 JGI24739J22299_10002906 3300001989 Bacteria 6577
3 JGI25154J39366_1000202 3300002738 Bacteria 42933
4 JGI25153J46596_10004261 3300003215 Bacteria 7742
5 JGI25153J46596_10015650 3300003215 Bacteria 3079
6 rootH1_10078842 3300003316 Bacteria 1569
7 rootH2_10001276 3300003320 Bacteria 51880
8 rootH2_10137097 3300003320 Bacteria 2849
9 rootL2_10072965 3300003322 Unclassified 4782
10 rootL2_10079534 3300003322 Bacteria 3282
11 rootL2_10089648 3300003322 Bacteria 2098
12 JGI25160J50197_1004763 3300003354 Bacteria 5794
13 JGI25160J50197_1005041 3300003354 Bacteria 5580
14 Ga0055535_1004046 3300003761 Bacteria 3771
15 Ga0055526_1024280 3300003771 Bacteria 1989
16 Ga0055528_1001774 3300003790 Bacteria 12382
17 Ga0055530_10005266 3300003791 Bacteria 6223
18 Ga0055531_10000023 3300003794 Bacteria 165025
19 Ga0065165_1000536 3300005262 Bacteria 57578
20 Ga0070658_10000359 3300005327 Bacteria 39682
21 Ga0070676_10001984 3300005328 Bacteria 10406
22 Ga0070683_100021032 3300005329 Bacteria 5819
23 Ga0070690_100021276 3300005330 Bacteria 3958
24 Ga0070670_100253118 3300005331 Bacteria 1535
25 Ga0070670_100268549 3300005331 Bacteria 1488
26 Ga0068869_100047576 3300005334 Bacteria 3098
27 Ga0068869_100075661 3300005334 Unclassified 2502
28 Ga0070666_10002520 3300005335 Bacteria 11088
29 Ga0070666_10132383 3300005335 Unclassified 1733
30 Ga0068868_100048777 3300005338 Bacteria 3322
31 Ga0070689_100330026 3300005340 Unclassified 1276
32 Ga0070691_10001825 3300005341 Bacteria 9286
33 Ga0070691_10030163 3300005341 Bacteria 2540
34 Ga0070687_100008784 3300005343 Bacteria 4294
35 Ga0070661_100096056 3300005344 Unclassified 2198
36 Ga0070668_100000077 3300005347 Bacteria 60697
37 Ga0070668_100366344 3300005347 Bacteria 1223
38 Ga0070675_100077334 3300005354 Bacteria 2769
39 Ga0070675_100135017 3300005354 Bacteria 2105
40 Ga0070671_100006270 3300005355 Bacteria 9478
41 Ga0070671_100063205 3300005355 Bacteria 3082
42 Ga0070674_100348250 3300005356 Bacteria 1196
43 Ga0070673_100000072 3300005364 Bacteria 43011
44 Ga0070673_100003336 3300005364 Bacteria 9975
45 Ga0070659_100008394 3300005366 Bacteria 7545
46 Ga0070667_100000382 3300005367 Bacteria 48246
47 Ga0070667_100038721 3300005367 Bacteria 3998
48 Ga0070678_100016747 3300005456 Bacteria 4698
49 Ga0070678_100112751 3300005456 Unclassified 2130
50 Ga0070681_10012525 3300005458 Bacteria 8417
51 Ga0068867_100001874 3300005459 Bacteria 14608
52 Ga0068867_100060603 3300005459 Bacteria 2807
53 Ga0070679_100210687 3300005530 Bacteria 1907
54 Ga0070684_100054287 3300005535 Bacteria 3491
55 Ga0068853_100019921 3300005539 Bacteria 5571
56 Ga0068853_100441686 3300005539 Bacteria 1223
57 Ga0068853_100484376 3300005539 Bacteria 1166
58 Ga0070672_100000010 3300005543 Bacteria 84105
59 Ga0070665_100000031 3300005548 Bacteria 333365
60 Ga0070665_100002045 3300005548 Bacteria 22705
61 Ga0068855_100000108 3300005563 Bacteria 103059
62 Ga0068855_100014994 3300005563 Bacteria 9334
63 Ga0068855_100020552 3300005563 Bacteria 7918
64 Ga0068855_100172120 3300005563 Unclassified 2452
65 Ga0068857_100009142 3300005577 Bacteria 8599
66 Ga0068857_100076913 3300005577 Bacteria 2977
67 Ga0068852_100011053 3300005616 Bacteria 6777
68 Ga0068852_100085432 3300005616 Bacteria 2811
69 Ga0068852_100094118 3300005616 Unclassified 2687
70 Ga0068864_100000389 3300005618 Bacteria 38410
71 Ga0068864_100429987 3300005618 Bacteria 1259
72 Ga0068851_10000503 3300005834 Bacteria 17049
73 Ga0068863_100001416 3300005841 Bacteria 23764
74 Ga0068858_100002897 3300005842 Bacteria 17254
75 Ga0068860_100000072 3300005843 Bacteria 174997
76 Ga0068860_100002404 3300005843 Bacteria 19640
77 Ga0068860_100013037 3300005843 Bacteria 8161
78 Ga0068860_100017268 3300005843 Bacteria 7032
79 Ga0081540_1036859 3300005983 Bacteria 2601
80 Ga0081539_10000534 3300005985 Bacteria 78990
81 Ga0097621_100000122 3300006237 Bacteria 44726
82 Ga0097621_100001610 3300006237 Bacteria 15463
83 Ga0097621_100002697 3300006237 Bacteria 12142
84 Ga0097621_100216555 3300006237 Bacteria 1667
85 Ga0068871_100000412 3300006358 Bacteria 29568
86 Ga0068871_100001186 3300006358 Bacteria 17453
87 Ga0068871_100148926 3300006358 Bacteria 1995
88 Ga0105240_10000176 3300009093 Bacteria 130109
89 Ga0105240_10001109 3300009093 Bacteria 47404
90 Ga0105240_10002195 3300009093 Bacteria 31863
91 Ga0105240_10023875 3300009093 Bacteria 8076
92 Ga0105240_10027645 3300009093 Bacteria 7424
93 Ga0111539_10481477 3300009094 Unclassified 1445
94 Ga0105245_10297030 3300009098 Unclassified 1584
95 Ga0105241_10000813 3300009174 Bacteria 23714
96 Ga0105241_10017328 3300009174 Bacteria 5291
97 Ga0105241_10198275 3300009174 Bacteria 1675
98 Ga0105248_10025097 3300009177 Bacteria 6626
99 Ga0105248_10082046 3300009177 Bacteria 3625
100 Ga0105237_10001480 3300009545 Bacteria 30945
101 Ga0105237_10004983 3300009545 Bacteria 15140
102 Ga0105237_10008202 3300009545 Bacteria 11345
103 Ga0105237_10016323 3300009545 Bacteria 7719
104 Ga0105237_10069300 3300009545 Unclassified 3522
105 Ga0105238_10003001 3300009551 Bacteria 16856
106 Ga0105238_10003918 3300009551 Bacteria 14774
107 Ga0105238_10174685 3300009551 Bacteria 2125
108 Ga0105249_10001812 3300009553 Bacteria 18586
109 Ga0105249_10037201 3300009553 Bacteria 4417
110 Ga0105239_10000168 3300010375 Bacteria 94279
111 Ga0105239_10000596 3300010375 Bacteria 51547
112 Ga0105239_10000616 3300010375 Bacteria 50645
113 Ga0105239_10015439 3300010375 Bacteria 8459
114 Ga0105239_10022395 3300010375 Bacteria 6965
115 Ga0105246_10078402 3300011119 Bacteria 2346
116 Ga0157373_10015933 3300013100 Bacteria 5487
117 Ga0157373_10182171 3300013100 Bacteria 1479
118 Ga0157371_10003513 3300013102 Bacteria 14156
119 Ga0157371_10025204 3300013102 Bacteria 4336
120 Ga0157371_10166216 3300013102 Unclassified 1576
121 Ga0157370_10001221 3300013104 Bacteria 32173
122 Ga0157370_10021198 3300013104 Bacteria 6478
123 Ga0157370_10058303 3300013104 Bacteria 3670
124 Ga0157370_10065918 3300013104 Bacteria 3425
125 Ga0157369_10034365 3300013105 Bacteria 5564
126 Ga0157369_10034761 3300013105 Bacteria 5528
127 Ga0157369_10048715 3300013105 Unclassified 4597
128 Ga0157374_10000440 3300013296 Bacteria 37662
129 Ga0157378_10032931 3300013297 Bacteria 4581
130 Ga0157378_10067576 3300013297 Bacteria 3203
131 Ga0157378_10175626 3300013297 Unclassified 2012
132 Ga0163162_10000084 3300013306 Bacteria 86252
133 Ga0163162_10000703 3300013306 Bacteria 30932
134 Ga0163162_10003748 3300013306 Bacteria 14565
135 Ga0163162_10004143 3300013306 Bacteria 13922
136 Ga0157372_10005733 3300013307 Bacteria 13225
137 Ga0157372_10007217 3300013307 Bacteria 11833
138 Ga0157372_10016341 3300013307 Bacteria 7963
139 Ga0157372_10066263 3300013307 Bacteria 4057
140 Ga0157372_10081910 3300013307 Unclassified 3653
141 Ga0157372_10143079 3300013307 Unclassified 2757
142 Ga0157372_10275979 3300013307 Bacteria 1954
143 Ga0157372_10301595 3300013307 Bacteria 1863
144 Ga0157375_10000219 3300013308 Bacteria 53586
145 Ga0157375_10001037 3300013308 Bacteria 23988
146 Ga0157375_10134900 3300013308 Bacteria 2591
147 Ga0163163_10000936 3300014325 Bacteria 24752
148 Ga0163163_10008520 3300014325 Bacteria 9114
149 Ga0163163_10045472 3300014325 Unclassified 4309
150 Ga0163163_10101837 3300014325 Bacteria 2894
151 Ga0157380_10083823 3300014326 Bacteria 2612
152 Ga0157379_10000078 3300014968 Bacteria 63565
153 Ga0157379_10054219 3300014968 Bacteria 3582
154 Ga0157376_10000219 3300014969 Bacteria 39583
155 Ga0157376_10000554 3300014969 Bacteria 24053
156 Ga0157376_10034967 3300014969 Bacteria 4061
157 Ga0157376_10091734 3300014969 Unclassified 2632
158 Ga0157376_10114695 3300014969 Bacteria 2378
159 Ga0157376_10293735 3300014969 Bacteria 1535
160 Ga0163161_10008597 3300017792 Bacteria 7057
161 Ga0163161_10058673 3300017792 Bacteria 2797
162 Ga0209258_100098 3300025242 Bacteria 215216
163 Ga0209646_1000006 3300025246 Bacteria 694084
164 Ga0209026_1008243 3300025250 Bacteria 2200
165 Ga0209148_1000682 3300025254 Bacteria 28368
166 Ga0209673_1000299 3300025273 Bacteria 91734
167 Ga0209130_1001255 3300025284 Bacteria 17694
168 Ga0209564_1010071 3300025295 Bacteria 4405
169 Ga0209564_1018172 3300025295 Bacteria 2695
170 Ga0209564_1020851 3300025295 Bacteria 2384
171 Ga0209758_1000497 3300025297 Bacteria 64050
172 Ga0209758_1007875 3300025297 Bacteria 7084
173 Ga0209050_1000771 3300025298 Bacteria 46024
174 Ga0207426_1000137 3300025302 Bacteria 199010
175 Ga0207426_1000562 3300025302 Bacteria 50691
176 Ga0207426_1001710 3300025302 Bacteria 16850
177 Ga0209051_1029382 3300025303 Bacteria 2152
178 Ga0209257_1000013 3300025304 Bacteria 1047305
179 Ga0207656_10002998 3300025321 Bacteria 5775
180 Ga0207688_10010442 3300025901 Bacteria 5055
181 Ga0207680_10000578 3300025903 Bacteria 17278
182 Ga0207647_10000094 3300025904 Bacteria 68043
183 Ga0207645_10012276 3300025907 Bacteria 5819
184 Ga0207705_10030260 3300025909 Bacteria 3862
185 Ga0207654_10003071 3300025911 Bacteria 8456
186 Ga0207707_10016290 3300025912 Bacteria 6485
187 Ga0207695_10000060 3300025913 Bacteria 360217
188 Ga0207695_10000102 3300025913 Bacteria 257838
189 Ga0207695_10000185 3300025913 Bacteria 180225
190 Ga0207695_10002019 3300025913 Bacteria 31240
191 Ga0207695_10026759 3300025913 Bacteria 6432
192 Ga0207695_10031976 3300025913 Bacteria 5764
193 Ga0207671_10001265 3300025914 Bacteria 29785
194 Ga0207671_10001378 3300025914 Bacteria 28270
195 Ga0207671_10006612 3300025914 Bacteria 10285
196 Ga0207671_10010285 3300025914 Bacteria 7731
197 Ga0207671_10014115 3300025914 Bacteria 6328
198 Ga0207660_10075885 3300025917 Bacteria 2457
199 Ga0207662_10023086 3300025918 Unclassified 3571
200 Ga0207657_10221916 3300025919 Unclassified 1514
201 Ga0207649_10072554 3300025920 Unclassified 2203
202 Ga0207694_10006677 3300025924 Bacteria 8765
203 Ga0207650_10026784 3300025925 Bacteria 4117
204 Ga0207650_10073949 3300025925 Bacteria 2568
205 Ga0207650_10265613 3300025925 Bacteria 1393
206 Ga0207659_10040148 3300025926 Bacteria 3270
207 Ga0207706_10003348 3300025933 Bacteria 15333
208 Ga0207704_10009070 3300025938 Bacteria 4781
209 Ga0207691_10000014 3300025940 Bacteria 142542
210 Ga0207691_10026558 3300025940 Bacteria 5432
211 Ga0207691_10072388 3300025940 Bacteria 3109
212 Ga0207711_10061586 3300025941 Bacteria 3236
213 Ga0207711_10092348 3300025941 Unclassified 2664
214 Ga0207661_10003629 3300025944 Bacteria 10748
215 Ga0207679_10009355 3300025945 Bacteria 6276
216 Ga0207667_10000084 3300025949 Bacteria 152086
217 Ga0207667_10004030 3300025949 Bacteria 18046
218 Ga0207667_10019803 3300025949 Bacteria 7500
219 Ga0207667_10136965 3300025949 Bacteria 2521
220 Ga0207651_10000262 3300025960 Bacteria 22471
221 Ga0207712_10106260 3300025961 Bacteria 2096
222 Ga0207668_10000544 3300025972 Bacteria 23682
223 Ga0207668_10192375 3300025972 Bacteria 1618
224 Ga0207658_10001505 3300025986 Bacteria 18119
225 Ga0207677_10001128 3300026023 Bacteria 14558
226 Ga0207703_10001897 3300026035 Bacteria 18529
227 Ga0207639_10065786 3300026041 Bacteria 2815
228 Ga0207641_10004744 3300026088 Bacteria 11719
229 Ga0207648_10000645 3300026089 Bacteria 39153
230 Ga0207648_10028505 3300026089 Bacteria 4949
231 Ga0207676_10011541 3300026095 Bacteria 6318
232 Ga0207676_10033405 3300026095 Bacteria 3887
233 Ga0207676_10408733 3300026095 Bacteria 1270
234 Ga0207674_10000487 3300026116 Bacteria 52391
235 Ga0207674_10494564 3300026116 Bacteria 1182
236 Ga0207683_10125582 3300026121 Unclassified 2305
237 Ga0209995_1008855 3300027471 Bacteria 1626
238 Ga0268266_10000088 3300028379 Bacteria 199029
239 Ga0268266_10003154 3300028379 Bacteria 16730
240 Ga0268264_10009165 3300028381 Bacteria 8200
241 Ga0268264_10012038 3300028381 Bacteria 7122
242 Ga0307517_10000959 3300028786 Bacteria 48920
243 Ga0265338_10059106 3300028800 Bacteria 3379
244 Ga0265324_10025774 3300029957 Bacteria 2083
245 Ga0265327_10000022 3300031251 Bacteria 402724
246 Ga0265316_10155402 3300031344 Unclassified 1712
247 Ga0307516_10001623 3300031730 Bacteria 30968
248 Ga0373945_0025271 3300035116 Bacteria 2063
249 Ga0373937_0168282 3300036401 Bacteria 2056
250 Ga0395899_0000025 3300037312 Bacteria 350927
251 Ga0395900_0050796 3300037418 Bacteria 4271
252 Ga0395900_0227365 3300037418 Bacteria 1878
253 Ga0395905_0000003 3300037471 Bacteria 1347396
254 Ga0395905_0012142 3300037471 Bacteria 8299
255 Ga0395905_0214726 3300037471 Bacteria 1802
256 Ga0395901_0014489 3300038443 Bacteria 8020
257 Ga0451855_0923724 3300041511 Unclassified 3928
258 Ga0466972_0003676 3300044658 Bacteria 7628
259 Ga0466961_0061574 3300044693 Bacteria 2385
260 Ga0453684_0014789 3300044712 Bacteria 12437
261 Ga0453684_0061434 3300044712 Bacteria 4823
262 Ga0453684_0295362 3300044712 Unclassified 1843
263 Ga0466971_0045780 3300044719 Bacteria 1965
264 Ga0466959_0025256 3300045049 Bacteria 4402
265 Ga0495638_0023926 3300046460 Bacteria 3989
266 Ga0495606_0010612 3300046507 Bacteria 7624
267 Ga0495630_0366120 3300046517 Bacteria 1104
268 Ga0495648_0012164 3300046524 Bacteria 6437
269 Ga0495633_0000059 3300046558 Bacteria 147552
270 Ga0495611_0024378 3300046648 Bacteria 2632
271 Ga0495625_0140407 3300046660 Bacteria 1630
272 Ga0495658_0051972 3300046683 Bacteria 2322
273 Ga0495670_0016778 3300046691 Unclassified 3600
274 Ga0495672_0037562 3300047320 Bacteria 2962
275 Ga0495687_000010 3300047443 Bacteria 413735
276 Ga0495602_0326418 3300048088 Bacteria 1115
277 Ga0496101_0040035 3300048904 Bacteria 3337
278 Ga0496106_0216861 3300048909 Bacteria 1525
279 Ga0496114_0157067 3300048917 Unclassified 1975
280 Ga0501032_0234912 3300049569 Bacteria 1192
281 Ga0501033_0039354 3300049570 Bacteria 3532
282 Ga0501033_0090709 3300049570 Bacteria 2236
283 Ga0501034_0009097 3300049571 Bacteria 10433
284 Ga0501034_0205988 3300049571 Bacteria 1923
285 Ga0501036_0014768 3300049572 Bacteria 6514
286 Ga0501037_0134494 3300049573 Bacteria 1771
287 Ga0501039_0112749 3300049575 Bacteria 2126
288 Ga0501039_0315687 3300049575 Bacteria 1229
289 Ga0501043_0071292 3300049579 Bacteria 2729
290 Ga0501043_0127994 3300049579 Bacteria 1991
291 Ga0501047_0014491 3300049581 Bacteria 7498
292 Ga0501047_0043217 3300049581 Bacteria 4353
293 Ga0501047_0084428 3300049581 Unclassified 3052
294 Ga0501047_0181251 3300049581 Unclassified 1973
295 Ga0501067_0020371 3300049583 Bacteria 3670
296 Ga0501073_0092844 3300049589 Bacteria 2097
297 Ga0501259_003565 3300049688 Unclassified 2472
298 Ga0501044_0006290 3300049823 Bacteria 13124
299 Ga0501044_0077148 3300049823 Bacteria 3380
300 Ga0501044_0143792 3300049823 Bacteria 2372
301 nmdc:mga09592_198459_c1 3300050508 Bacteria 1737
302 Ga0500644_0000040 3300053088 Bacteria 77696
303 Ga0500644_0001325 3300053088 Bacteria 6670
304 Ga0500583_0009941 3300053092 Bacteria 3502
305 Ga0500583_0031807 3300053092 Bacteria 2323
306 Ga0500651_0028473 3300053093 Bacteria 3513
307 Ga0500562_000017 3300053108 Bacteria 130556
308 Ga0500607_028994 3300053121 Bacteria 3060
309 Ga0500652_006079 3300053131 Bacteria 3856
310 Ga0500658_0010395 3300053134 Bacteria 3431
311 Ga0500568_0046709 3300053139 Bacteria 1717
312 Ga0500616_0046341 3300053153 Bacteria 2312
313 Ga0500622_0000110 3300053156 Bacteria 83911
314 Ga0500622_0004029 3300053156 Bacteria 9457
315 Ga0500636_0137511 3300053177 Bacteria 1355
316 Ga0500645_010233 3300053730 Bacteria 3113
317 Ga0500661_009493 3300055283 Bacteria 1780
318 Ga0501082_0044443 3300060353 Bacteria 3831
319 2819588838 2818991444 Bacteria 6968812
320 2819678340 2818991460 Bacteria 7595395
321 2883068443 2883068021 Bacteria 6192739
322 2884793212 2884791551 Bacteria 8511252
323 2896089627 2896085136 Bacteria 6129793
324 2896110876 2896109856 Bacteria 7140722
325 2929157367 2929154850 Bacteria 6753285
326 2929242883 2929239360 Bacteria 7745570
327 8003155155 8003151029 Bacteria 8187759
328 Ga0068855_100167268
329 JGI24739J22299_10002906
330 JGI25154J39366_1000202
331 JGI25153J46596_10004261
332 JGI25153J46596_10015650
333 rootH1_10078842
334 rootH2_10001276
335 rootH2_10137097
336 rootL2_10072965
337 rootL2_10079534
338 rootL2_10089648
339 JGI25160J50197_1004763
340 JGI25160J50197_1005041
341 Ga0055535_1004046
342 Ga0055526_1024280
343 Ga0055528_1001774
344 Ga0055530_10005266
345 Ga0055531_10000023
346 Ga0065165_1000536
347 Ga0070658_10000359
348 Ga0070676_10001984
349 Ga0070683_100021032
350 Ga0070690_100021276
351 Ga0070670_100253118
352 Ga0070670_100268549
353 Ga0068869_100047576
354 Ga0068869_100075661
355 Ga0070666_10002520
356 Ga0070666_10132383
357 Ga0068868_100048777
358 Ga0070689_100330026
359 Ga0070691_10001825
360 Ga0070691_10030163
361 Ga0070687_100008784
362 Ga0070661_100096056
363 Ga0070668_100000077
364 Ga0070668_100366344
365 Ga0070675_100077334
366 Ga0070675_100135017
367 Ga0070671_100006270
368 Ga0070671_100063205
369 Ga0070674_100348250
370 Ga0070673_100000072
371 Ga0070673_100003336
372 Ga0070659_100008394
373 Ga0070667_100000382
374 Ga0070667_100038721
375 Ga0070678_100016747
376 Ga0070678_100112751
377 Ga0070681_10012525
378 Ga0068867_100001874
379 Ga0068867_100060603
380 Ga0070679_100210687
381 Ga0070684_100054287
382 Ga0068853_100019921
383 Ga0068853_100441686
384 Ga0068853_100484376
385 Ga0070672_100000010
386 Ga0070665_100000031
387 Ga0070665_100002045
388 Ga0068855_100000108
389 Ga0068855_100014994
390 Ga0068855_100020552
391 Ga0068855_100172120
392 Ga0068857_100009142
393 Ga0068857_100076913
394 Ga0068852_100011053
395 Ga0068852_100085432
396 Ga0068852_100094118
397 Ga0068864_100000389
398 Ga0068864_100429987
399 Ga0068851_10000503
400 Ga0068863_100001416
401 Ga0068858_100002897
402 Ga0068860_100000072
403 Ga0068860_100002404
404 Ga0068860_100013037
405 Ga0068860_100017268
406 Ga0081540_1036859
407 Ga0081539_10000534
408 Ga0097621_100000122
409 Ga0097621_100001610
410 Ga0097621_100002697
411 Ga0097621_100216555
412 Ga0068871_100000412
413 Ga0068871_100001186
414 Ga0068871_100148926
415 Ga0105240_10000176
416 Ga0105240_10001109
417 Ga0105240_10002195
418 Ga0105240_10023875
419 Ga0105240_10027645
420 Ga0111539_10481477
421 Ga0105245_10297030
422 Ga0105241_10000813
423 Ga0105241_10017328
424 Ga0105241_10198275
425 Ga0105248_10025097
426 Ga0105248_10082046
427 Ga0105237_10001480
428 Ga0105237_10004983
429 Ga0105237_10008202
430 Ga0105237_10016323
431 Ga0105237_10069300
432 Ga0105238_10003001
433 Ga0105238_10003918
434 Ga0105238_10174685
435 Ga0105249_10001812
436 Ga0105249_10037201
437 Ga0105239_10000168
438 Ga0105239_10000596
439 Ga0105239_10000616
440 Ga0105239_10015439
441 Ga0105239_10022395
442 Ga0105246_10078402
443 Ga0157373_10015933
444 Ga0157373_10182171
445 Ga0157371_10003513
446 Ga0157371_10025204
447 Ga0157371_10166216
448 Ga0157370_10001221
449 Ga0157370_10021198
450 Ga0157370_10058303
451 Ga0157370_10065918
452 Ga0157369_10034365
453 Ga0157369_10034761
454 Ga0157369_10048715
455 Ga0157374_10000440
456 Ga0157378_10032931
457 Ga0157378_10067576
458 Ga0157378_10175626
459 Ga0163162_10000084
460 Ga0163162_10000703
461 Ga0163162_10003748
462 Ga0163162_10004143
463 Ga0157372_10005733
464 Ga0157372_10007217
465 Ga0157372_10016341
466 Ga0157372_10066263
467 Ga0157372_10081910
468 Ga0157372_10143079
469 Ga0157372_10275979
470 Ga0157372_10301595
471 Ga0157375_10000219
472 Ga0157375_10001037
473 Ga0157375_10134900
474 Ga0163163_10000936
475 Ga0163163_10008520
476 Ga0163163_10045472
477 Ga0163163_10101837
478 Ga0157380_10083823
479 Ga0157379_10000078
480 Ga0157379_10054219
481 Ga0157376_10000219
482 Ga0157376_10000554
483 Ga0157376_10034967
484 Ga0157376_10091734
485 Ga0157376_10114695
486 Ga0157376_10293735
487 Ga0163161_10008597
488 Ga0163161_10058673
489 Ga0209258_100098
490 Ga0209646_1000006
491 Ga0209026_1008243
492 Ga0209148_1000682
493 Ga0209673_1000299
494 Ga0209130_1001255
495 Ga0209564_1010071
496 Ga0209564_1018172
497 Ga0209564_1020851
498 Ga0209758_1000497
499 Ga0209758_1007875
500 Ga0209050_1000771
501 Ga0207426_1000137
502 Ga0207426_1000562
503 Ga0207426_1001710
504 Ga0209051_1029382
505 Ga0209257_1000013
506 Ga0207656_10002998
507 Ga0207688_10010442
508 Ga0207680_10000578
509 Ga0207647_10000094
510 Ga0207645_10012276
511 Ga0207705_10030260
512 Ga0207654_10003071
513 Ga0207707_10016290
514 Ga0207695_10000060
515 Ga0207695_10000102
516 Ga0207695_10000185
517 Ga0207695_10002019
518 Ga0207695_10026759
519 Ga0207695_10031976
520 Ga0207671_10001265
521 Ga0207671_10001378
522 Ga0207671_10006612
523 Ga0207671_10010285
524 Ga0207671_10014115
525 Ga0207660_10075885
526 Ga0207662_10023086
527 Ga0207657_10221916
528 Ga0207649_10072554
529 Ga0207694_10006677
530 Ga0207650_10026784
531 Ga0207650_10073949
532 Ga0207650_10265613
533 Ga0207659_10040148
534 Ga0207706_10003348
535 Ga0207704_10009070
536 Ga0207691_10000014
537 Ga0207691_10026558
538 Ga0207691_10072388
539 Ga0207711_10061586
540 Ga0207711_10092348
541 Ga0207661_10003629
542 Ga0207679_10009355
543 Ga0207667_10000084
544 Ga0207667_10004030
545 Ga0207667_10019803
546 Ga0207667_10136965
547 Ga0207651_10000262
548 Ga0207712_10106260
549 Ga0207668_10000544
550 Ga0207668_10192375
551 Ga0207658_10001505
552 Ga0207677_10001128
553 Ga0207703_10001897
554 Ga0207639_10065786
555 Ga0207641_10004744
556 Ga0207648_10000645
557 Ga0207648_10028505
558 Ga0207676_10011541
559 Ga0207676_10033405
560 Ga0207676_10408733
561 Ga0207674_10000487
562 Ga0207674_10494564
563 Ga0207683_10125582
564 Ga0209995_1008855
565 Ga0268266_10000088
566 Ga0268266_10003154
567 Ga0268264_10009165
568 Ga0268264_10012038
569 Ga0307517_10000959
570 Ga0265338_10059106
571 Ga0265324_10025774
572 Ga0265327_10000022
573 Ga0265316_10155402
574 Ga0307516_10001623
575 Ga0373945_0025271
576 Ga0373937_0168282
577 Ga0395899_0000025
578 Ga0395900_0050796
579 Ga0395900_0227365
580 Ga0395905_0000003
581 Ga0395905_0012142
582 Ga0395905_0214726
583 Ga0395901_0014489
584 Ga0451855_0923724
585 Ga0466972_0003676
586 Ga0466961_0061574
587 Ga0453684_0014789
588 Ga0453684_0061434
589 Ga0453684_0295362
590 Ga0466971_0045780
591 Ga0466959_0025256
592 Ga0495638_0023926
593 Ga0495606_0010612
594 Ga0495630_0366120
595 Ga0495648_0012164
596 Ga0495633_0000059
597 Ga0495611_0024378
598 Ga0495625_0140407
599 Ga0495658_0051972
600 Ga0495670_0016778
601 Ga0495672_0037562
602 Ga0495687_000010
603 Ga0495602_0326418
604 Ga0496101_0040035
605 Ga0496106_0216861
606 Ga0496114_0157067
607 Ga0501032_0234912
608 Ga0501033_0039354
609 Ga0501033_0090709
610 Ga0501034_0009097
611 Ga0501034_0205988
612 Ga0501036_0014768
613 Ga0501037_0134494
614 Ga0501039_0112749
615 Ga0501039_0315687
616 Ga0501043_0071292
617 Ga0501043_0127994
618 Ga0501047_0014491
619 Ga0501047_0043217
620 Ga0501047_0084428
621 Ga0501047_0181251
622 Ga0501067_0020371
623 Ga0501073_0092844
624 Ga0501259_003565
625 Ga0501044_0006290
626 Ga0501044_0077148
627 Ga0501044_0143792
628 nmdc:mga09592_198459_c1
629 Ga0500644_0000040
630 Ga0500644_0001325
631 Ga0500583_0009941
632 Ga0500583_0031807
633 Ga0500651_0028473
634 Ga0500562_000017
635 Ga0500607_028994
636 Ga0500652_006079
637 Ga0500658_0010395
638 Ga0500568_0046709
639 Ga0500616_0046341
640 Ga0500622_0000110
641 Ga0500622_0004029
642 Ga0500636_0137511
643 Ga0500645_010233
644 Ga0500661_009493
645 Ga0501082_0044443
646 2819588838
647 2819678340
648 2883068443
649 2884793212
650 2896089627
651 2896110876
652 2929157367
653 2929242883
654 8003155155

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

152

358

0.99

PF19300

BPD_transp_1_N

Binding-prot-dependent transport system membrane comp, N-term

1

80

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahd-assembly1.cif.gz_A opua (e190q) occluded 0.7571 119 344
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.7364 119 336
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.7126 119 339
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.6932 121 344
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.6732 124 337
ID Description Score Start End Superfamily
af_I6YGV9_86_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.893 117 344 1.10.3720.10
af_P0AFH2_84_300_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8868 115 342 1.10.3720.10
af_I6YGV9_86_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8852 117 344 1.10.3720.10
af_P0AFH2_84_300_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8791 115 342 1.10.3720.10
af_Q2G1F7_265_478_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8785 117 340 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A2N5Z950-F1-model_v4 ABC transporter permease 0.9402 5 301 GO:0005886
GO:0055085
AF-A0A2N5Z950-F1-model_v4 ABC transporter permease 0.9021 5 301 GO:0005886
GO:0055085
AF-A0A2E1GSW6-F1-model_v4 ABC transporter permease 0.9003 2 345 GO:0005886
GO:0071916
AF-H5SIH0-F1-model_v4 Peptide/nickel transport system permease protein 0.8954 2 348 GO:0005886
GO:0055085
AF-A0A256XTJ5-F1-model_v4 Peptide ABC transporter 0.8893 2 289 GO:0005886
GO:0055085

Map