F408963

General Info

Members Datasets Scaffolds Average Seq Length
327 218 289 404

Family's Representative Sequence

Representative Sequence 3300048927|Ga0496124_0004234|Ga0496124_0004234_14919_16283
Length 454
Sequence MGGFLRPVAMVPGGTKAYHHWILVFIWRRPFRACARRAVSTAQTEDRMTPASPSTRRLALLLAGLAMFGPFSIDTIFPAFLLLGDRMQVDQVAVQQTISVYLLFYGLMSLAHGPLSDAFGRKRVIIGGLVLFIGASVGCALSRDMTTLLVFRALQGVTAGVGVIVGRAVIRDLYHGADAQRLMSQVSMIFGVAPAIAPIIGGWILLGGGDWPLIFWFLVLFGVVLLLATGKWLPETHPVEARTPLSMRELLRSYGRMGSNPRLLRLAAAGAFNFSGIFLYIASAPVFVMQHLKLGEGGFAWLFIPTIGGMTVGSFLSGRMAGRIVAQRQIAIGFGLCAVSALLNFGYVASVPQIELPWAVLPIFLGGVGMALIFPILALAVLDMYPHQRGLASSMQMFIQLMINTVVAGVVSPMLSAKPLHLALGYAGFFAIGGSFWYWERQCERRRDTLTPIE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
5 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
6 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
7 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
8 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
9 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
10 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
11 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
12 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
13 2818991457 Xanthomonas translucens 569 Isolate Unclassified
14 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
15 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
16 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
17 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
18 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
19 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
20 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
21 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
22 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
23 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
24 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
25 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
26 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
27 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
28 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
29 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
30 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
31 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
32 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
33 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
34 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
35 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
36 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
37 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
38 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
39 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
40 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
41 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
42 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
43 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
44 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
45 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
46 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
47 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
48 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
49 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
52 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
53 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
54 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
55 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
58 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
59 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
60 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
61 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
62 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
63 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
64 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
65 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
66 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
67 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
68 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
69 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
73 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
74 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
77 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
78 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
88 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
94 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
95 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
96 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
97 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
106 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
137 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
141 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
142 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
143 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
146 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
147 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
148 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
149 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
150 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
151 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
154 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
155 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
156 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
157 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
158 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
159 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
160 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
161 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
162 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
163 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
171 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
192 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
193 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
194 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
195 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
196 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
197 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
198 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
199 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
200 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
201 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
205 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
206 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
207 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
208 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
209 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
210 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
211 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
212 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
213 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
214 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
215 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
216 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
217 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
218 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.38
Metatranscriptomes 0
Isolates 11.62

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 14.07
Nodule 0.31
Rhizoplane 1.83
Rhizosphere 63
Stem 0
Stem Tuber 0
Unclassified 20.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2067340 2162886007 Bacteria 6998
2 JGI25154J39366_1000892 3300002738 Bacteria 12746
3 JGI25152J39213_1000146 3300002773 Bacteria 48401
4 JGI25150J39212_1000120 3300002774 Bacteria 44029
5 JGI25151J46595_10000107 3300003187 Bacteria 113288
6 JGI25153J46596_10000078 3300003215 Bacteria 113288
7 rootH2_10019034 3300003320 Bacteria 4624
8 Ga0055526_1000052 3300003771 Bacteria 116035
9 Ga0055526_1002347 3300003771 Bacteria 12859
10 Ga0055537_1001680 3300003773 Bacteria 8206
11 Ga0055536_1001811 3300003781 Bacteria 12562
12 Ga0055536_1016398 3300003781 Bacteria 2479
13 Ga0055536_1016476 3300003781 Bacteria 2470
14 Ga0055534_1000065 3300003784 Bacteria 81111
15 Ga0055528_1000778 3300003790 Bacteria 22192
16 Ga0055530_10001637 3300003791 Bacteria 16004
17 Ga0055530_10002305 3300003791 Bacteria 12481
18 Ga0055531_10021740 3300003794 Bacteria 2475
19 Ga0058692_1000011 3300003856 Bacteria 321321
20 Ga0058692_1000017 3300003856 Bacteria 274459
21 Ga0065704_10071419 3300005289 Bacteria 11250
22 Ga0065704_10081056 3300005289 Bacteria 3829
23 Ga0070670_100001792 3300005331 Bacteria 17489
24 Ga0070668_100002865 3300005347 Bacteria 12725
25 Ga0070668_100080721 3300005347 Bacteria 2549
26 Ga0070669_100029199 3300005353 Bacteria 3974
27 Ga0070667_100000012 3300005367 Bacteria 258575
28 Ga0070667_100023372 3300005367 Bacteria 5127
29 Ga0070663_100084052 3300005455 Bacteria 2345
30 Ga0070678_100131032 3300005456 Bacteria 1992
31 Ga0070681_10000007 3300005458 Bacteria 159821
32 Ga0070681_10064643 3300005458 Bacteria 3629
33 Ga0070698_100124536 3300005471 Unclassified 2535
34 Ga0070679_100257931 3300005530 Bacteria 1699
35 Ga0068853_100001939 3300005539 Bacteria 15267
36 Ga0068853_100061226 3300005539 Bacteria 3255
37 Ga0068853_100069318 3300005539 Bacteria 3067
38 Ga0070693_100037547 3300005547 Bacteria 2702
39 Ga0070665_100000333 3300005548 Bacteria 72698
40 Ga0070665_100021083 3300005548 Bacteria 6551
41 Ga0070665_100029143 3300005548 Bacteria 5556
42 Ga0070665_100134894 3300005548 Bacteria 2470
43 Ga0068857_100155364 3300005577 Bacteria 2074
44 Ga0068859_100000084 3300005617 Bacteria 87012
45 Ga0068863_100003282 3300005841 Bacteria 15974
46 Ga0068863_100005548 3300005841 Bacteria 12408
47 Ga0068860_100048106 3300005843 Bacteria 4065
48 Ga0068862_100001460 3300005844 Bacteria 21757
49 Ga0081540_1008352 3300005983 Bacteria 7237
50 Ga0081539_10025920 3300005985 Bacteria 3757
51 Ga0075364_10042040 3300006051 Bacteria 2969
52 Ga0075366_10002801 3300006195 Bacteria 9016
53 Ga0097621_100018369 3300006237 Bacteria 5338
54 Ga0068871_100021996 3300006358 Bacteria 4912
55 Ga0075428_100243648 3300006844 Unclassified 1939
56 Ga0097620_100000084 3300006931 Bacteria 87012
57 Ga0105240_10039441 3300009093 Bacteria 6049
58 Ga0105240_10116546 3300009093 Bacteria 3222
59 Ga0114129_10368481 3300009147 Bacteria 1899
60 Ga0105243_10069116 3300009148 Bacteria 2848
61 Ga0105248_10000775 3300009177 Bacteria 35867
62 Ga0105237_10001831 3300009545 Bacteria 27394
63 Ga0105237_10023245 3300009545 Bacteria 6354
64 Ga0105237_10178128 3300009545 Bacteria 2126
65 Ga0105238_10369865 3300009551 Bacteria 1424
66 Ga0105249_10009481 3300009553 Bacteria 8526
67 Ga0105249_10023339 3300009553 Bacteria 5550
68 Ga0105239_10006003 3300010375 Bacteria 14135
69 Ga0105239_10196776 3300010375 Bacteria 2257
70 Ga0105239_10295720 3300010375 Bacteria 1823
71 Ga0157373_10122917 3300013100 Bacteria 1825
72 Ga0157371_10000588 3300013102 Bacteria 43132
73 Ga0157371_10053790 3300013102 Bacteria 2859
74 Ga0157370_10031192 3300013104 Bacteria 5216
75 Ga0157370_10124951 3300013104 Bacteria 2402
76 Ga0157370_10263557 3300013104 Bacteria 1592
77 Ga0157369_10106820 3300013105 Bacteria 2979
78 Ga0157378_10000042 3300013297 Bacteria 107945
79 Ga0157372_10005096 3300013307 Bacteria 13966
80 Ga0182008_10000509 3300014497 Bacteria 29220
81 Ga0182006_1011688 3300015261 Bacteria 3857
82 Ga0182006_1040109 3300015261 Bacteria 1844
83 Ga0182007_10000191 3300015262 Bacteria 41295
84 Ga0182005_1003623 3300015265 Bacteria 5193
85 Ga0163161_10062658 3300017792 Bacteria 2709
86 Ga0163161_10064792 3300017792 Bacteria 2666
87 Ga0213872_10000223 3300021361 Bacteria 50255
88 Ga0213876_10001833 3300021384 Bacteria 12817
89 Ga0207425_1000028 3300025245 Bacteria 286333
90 Ga0209129_1000065 3300025258 Bacteria 232568
91 Ga0209565_1000023 3300025263 Bacteria 388244
92 Ga0209673_1000308 3300025273 Bacteria 90538
93 Ga0209673_1000853 3300025273 Bacteria 39621
94 Ga0209675_1000048 3300025291 Bacteria 221457
95 Ga0209676_1000353 3300025292 Bacteria 86825
96 Ga0209676_1006700 3300025292 Bacteria 5609
97 Ga0209025_1000002 3300025294 Bacteria 1393142
98 Ga0209564_1000106 3300025295 Bacteria 216131
99 Ga0209758_1000003 3300025297 Bacteria 1398533
100 Ga0209050_1001028 3300025298 Bacteria 34778
101 Ga0209050_1001178 3300025298 Bacteria 30826
102 Ga0209256_1003203 3300025299 Bacteria 11824
103 Ga0209051_1021054 3300025303 Bacteria 2789
104 Ga0209051_1024724 3300025303 Bacteria 2462
105 Ga0209257_1000062 3300025304 Bacteria 362413
106 Ga0209257_1002399 3300025304 Bacteria 18738
107 Ga0209257_1008168 3300025304 Bacteria 6059
108 Ga0207713_1000282 3300025735 Bacteria 59331
109 Ga0207685_10028229 3300025905 Bacteria 1974
110 Ga0207654_10156052 3300025911 Bacteria 1470
111 Ga0207707_10000058 3300025912 Bacteria 111904
112 Ga0207671_10011021 3300025914 Bacteria 7401
113 Ga0207671_10217705 3300025914 Bacteria 1495
114 Ga0207681_10022499 3300025923 Bacteria 4021
115 Ga0207650_10029499 3300025925 Bacteria 3944
116 Ga0207709_10005838 3300025935 Bacteria 6959
117 Ga0207711_10010635 3300025941 Bacteria 7654
118 Ga0207689_10039271 3300025942 Bacteria 3919
119 Ga0207667_10077216 3300025949 Bacteria 3455
120 Ga0207712_10004889 3300025961 Bacteria 8473
121 Ga0207658_10000614 3300025986 Bacteria 31571
122 Ga0207677_10116009 3300026023 Bacteria 2004
123 Ga0207639_10001250 3300026041 Bacteria 17217
124 Ga0207639_10018720 3300026041 Bacteria 4924
125 Ga0207639_10023823 3300026041 Bacteria 4423
126 Ga0207678_10002485 3300026067 Bacteria 16760
127 Ga0207641_10066090 3300026088 Bacteria 3095
128 Ga0207641_10075153 3300026088 Bacteria 2917
129 Ga0207674_10198719 3300026116 Bacteria 1955
130 Ga0207674_10332087 3300026116 Bacteria 1470
131 Ga0207675_100040260 3300026118 Bacteria 4363
132 Ga0207683_10100705 3300026121 Bacteria 2579
133 Ga0209371_1000007 3300027312 Bacteria 1050654
134 Ga0209371_1000044 3300027312 Bacteria 327086
135 Ga0209969_1002717 3300027360 Bacteria 2451
136 Ga0209984_1002816 3300027424 Bacteria 1960
137 Ga0209999_1007654 3300027543 Bacteria 1943
138 Ga0209982_1002265 3300027552 Bacteria 2694
139 Ga0209983_1003373 3300027665 Bacteria 3418
140 Ga0209971_1001206 3300027682 Bacteria 6492
141 Ga0209974_10003525 3300027876 Bacteria 5634
142 Ga0209974_10032157 3300027876 Bacteria 1738
143 Ga0268266_10000001 3300028379 Bacteria 4040580
144 Ga0268266_10017318 3300028379 Bacteria 6150
145 Ga0268266_10023402 3300028379 Bacteria 5261
146 Ga0268265_10000072 3300028380 Bacteria 130716
147 Ga0268256_1000008 3300030500 Bacteria 1050654
148 Ga0268256_1000046 3300030500 Bacteria 327003
149 Ga0316176_1073551 3300030732 Bacteria 2887
150 Ga0307412_10020773 3300031911 Bacteria 4001
151 Ga0307416_100056699 3300032002 Bacteria 3164
152 Ga0395899_0012547 3300037312 Bacteria 6496
153 Ga0436365_1383407 3300039437 Bacteria 77328
154 Ga0451791_1665661 3300041451 Bacteria 4918
155 Ga0451793_0051508 3300041452 Bacteria 2163
156 Ga0451800_0479895 3300041459 Bacteria 3904
157 Ga0451806_059732 3300041462 Bacteria 11101
158 Ga0451837_0134979 3300041494 Bacteria 4994
159 Ga0451853_0069786 3300041512 Bacteria 5859
160 Ga0466972_0004596 3300044658 Bacteria 6920
161 Ga0466970_0000560 3300044765 Bacteria 18162
162 Ga0466959_0087610 3300045049 Bacteria 2239
163 Ga0495627_008900 3300046453 Bacteria 3719
164 Ga0495638_0002106 3300046460 Bacteria 16830
165 Ga0495638_0061227 3300046460 Bacteria 2326
166 Ga0495641_0045421 3300046461 Bacteria 2023
167 Ga0495610_0023776 3300046512 Bacteria 3322
168 Ga0495616_0035700 3300046513 Bacteria 2570
169 Ga0495631_0018562 3300046518 Bacteria 3272
170 Ga0495643_0012422 3300046522 Bacteria 5138
171 Ga0495633_0028391 3300046558 Bacteria 2727
172 Ga0495672_0000704 3300047320 Bacteria 36769
173 Ga0495672_0021726 3300047320 Bacteria 4182
174 Ga0495686_0003124 3300047472 Bacteria 14636
175 Ga0495686_0031773 3300047472 Bacteria 3420
176 Ga0496105_0221357 3300048908 Bacteria 1541
177 Ga0496113_0272079 3300048916 Bacteria 1354
178 Ga0496116_0045538 3300048919 Bacteria 2968
179 Ga0496116_0060350 3300048919 Bacteria 2460
180 Ga0496117_0002502 3300048920 Bacteria 23069
181 Ga0496117_0004069 3300048920 Bacteria 16418
182 Ga0496117_0026883 3300048920 Bacteria 4493
183 Ga0496117_0030349 3300048920 Bacteria 4150
184 Ga0496117_0113019 3300048920 Bacteria 1687
185 Ga0496118_0000219 3300048921 Bacteria 99957
186 Ga0496118_0001072 3300048921 Bacteria 42721
187 Ga0496118_0002615 3300048921 Bacteria 23887
188 Ga0496118_0004364 3300048921 Bacteria 16822
189 Ga0496118_0020701 3300048921 Bacteria 5824
190 Ga0496118_0042831 3300048921 Bacteria 3566
191 Ga0496118_0051472 3300048921 Bacteria 3150
192 Ga0496119_0001070 3300048922 Bacteria 34682
193 Ga0496119_0004408 3300048922 Bacteria 14029
194 Ga0496120_0000355 3300048923 Bacteria 75259
195 Ga0496120_0002048 3300048923 Bacteria 21806
196 Ga0496121_0028255 3300048924 Bacteria 5226
197 Ga0496121_0047198 3300048924 Bacteria 3677
198 Ga0496121_0093131 3300048924 Bacteria 2347
199 Ga0496122_0000906 3300048925 Bacteria 54604
200 Ga0496122_0005846 3300048925 Bacteria 14446
201 Ga0496122_0024459 3300048925 Bacteria 5285
202 Ga0496122_0042306 3300048925 Bacteria 3586
203 Ga0496123_0000835 3300048926 Bacteria 49302
204 Ga0496123_0001225 3300048926 Bacteria 37380
205 Ga0496123_0026047 3300048926 Bacteria 4393
206 Ga0496124_0004234 3300048927 Bacteria 16877
207 Ga0496124_0005362 3300048927 Bacteria 14479
208 Ga0496124_0005700 3300048927 Bacteria 13875
209 Ga0496124_0011403 3300048927 Bacteria 8885
210 Ga0496124_0061186 3300048927 Bacteria 3157
211 Ga0496124_0067253 3300048927 Bacteria 2982
212 Ga0496124_0152511 3300048927 Bacteria 1810
213 Ga0496125_0005599 3300048928 Bacteria 13873
214 Ga0496125_0042627 3300048928 Bacteria 3862
215 Ga0496125_0072719 3300048928 Bacteria 2677
216 Ga0496125_0072938 3300048928 Bacteria 2672
217 Ga0496125_0080898 3300048928 Bacteria 2484
218 Ga0496126_0054772 3300048929 Bacteria 3611
219 Ga0496126_0194558 3300048929 Bacteria 1716
220 Ga0501031_0014790 3300049568 Bacteria 5072
221 Ga0501031_0015242 3300049568 Bacteria 4991
222 Ga0501031_0067839 3300049568 Bacteria 2323
223 Ga0501032_0009603 3300049569 Bacteria 7010
224 Ga0501032_0017373 3300049569 Bacteria 5051
225 Ga0501032_0091457 3300049569 Bacteria 2018
226 Ga0501033_0000565 3300049570 Bacteria 34468
227 Ga0501033_0004070 3300049570 Bacteria 11805
228 Ga0501033_0059717 3300049570 Bacteria 2815
229 Ga0501033_0062430 3300049570 Bacteria 2743
230 Ga0501034_0008337 3300049571 Bacteria 10964
231 Ga0501034_0012840 3300049571 Bacteria 8638
232 Ga0501034_0166273 3300049571 Bacteria 2174
233 Ga0501037_0088927 3300049573 Bacteria 2235
234 Ga0501038_0010996 3300049574 Bacteria 8264
235 Ga0501038_0031857 3300049574 Bacteria 4657
236 Ga0501038_0189491 3300049574 Bacteria 1655
237 Ga0501039_0041368 3300049575 Bacteria 3559
238 Ga0501039_0167170 3300049575 Bacteria 1729
239 Ga0501040_0006938 3300049576 Bacteria 7334
240 Ga0501042_0034556 3300049578 Bacteria 3585
241 Ga0501043_0008993 3300049579 Bacteria 7860
242 Ga0501043_0011546 3300049579 Bacteria 6915
243 Ga0501043_0012374 3300049579 Bacteria 6673
244 Ga0501046_0025850 3300049580 Bacteria 4800
245 Ga0501046_0111136 3300049580 Bacteria 2093
246 Ga0501047_0014856 3300049581 Bacteria 7410
247 Ga0501047_0075270 3300049581 Bacteria 3248
248 Ga0501047_0081876 3300049581 Bacteria 3103
249 Ga0501047_0168028 3300049581 Bacteria 2063
250 Ga0501047_0245413 3300049581 Bacteria 1640
251 Ga0501048_0004916 3300049582 Bacteria 10197
252 Ga0501067_0001190 3300049583 Bacteria 14128
253 Ga0501069_0001514 3300049585 Bacteria 11506
254 Ga0501069_0104318 3300049585 Bacteria 1611
255 Ga0501070_0043152 3300049586 Bacteria 3753
256 Ga0501070_0190499 3300049586 Bacteria 1686
257 Ga0501070_0257304 3300049586 Bacteria 1427
258 Ga0501071_0022482 3300049587 Bacteria 4395
259 Ga0501072_0013892 3300049588 Bacteria 6171
260 Ga0501073_0007492 3300049589 Bacteria 8109
261 Ga0501074_0018335 3300049590 Bacteria 5083
262 Ga0501079_0010234 3300049741 Bacteria 7119
263 Ga0501080_0019103 3300049742 Bacteria 6346
264 Ga0501080_0085996 3300049742 Bacteria 2921
265 Ga0501080_0093090 3300049742 Bacteria 2798
266 Ga0501081_0015722 3300049743 Bacteria 4995
267 Ga0501083_0002813 3300049744 Bacteria 12004
268 Ga0501083_0035393 3300049744 Bacteria 3411
269 Ga0501035_0011453 3300049822 Bacteria 8222
270 Ga0501035_0013102 3300049822 Bacteria 7652
271 Ga0501035_0082682 3300049822 Bacteria 2833
272 Ga0501035_0176257 3300049822 Bacteria 1844
273 Ga0501044_0005651 3300049823 Bacteria 13868
274 Ga0501044_0007454 3300049823 Bacteria 12036
275 Ga0501044_0043525 3300049823 Bacteria 4664
276 Ga0501044_0073284 3300049823 Bacteria 3481
277 Ga0501044_0235988 3300049823 Bacteria 1774
278 nmdc:mga0k408_3049_c1 3300050493 Bacteria 8888
279 Ga0500610_0002927 3300053079 Bacteria 6428
280 Ga0500643_008051 3300053087 Bacteria 4176
281 Ga0500651_0002746 3300053093 Bacteria 9407
282 Ga0500651_0007367 3300053093 Bacteria 6425
283 Ga0500593_071817 3300053117 Bacteria 1501
284 Ga0500597_000089 3300053120 Bacteria 19037
285 Ga0500559_0017796 3300053136 Bacteria 3005
286 Ga0500568_0003069 3300053139 Bacteria 9538
287 Ga0500634_0000128 3300053161 Bacteria 27544
288 Ga0501084_0058785 3300054114 Bacteria 3217
289 Ga0501082_0000429 3300060353 Bacteria 37268

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0011546 Ga0501043_0011546_5722_6756 322
2 3300037312 Ga0395899_0012547 Ga0395899_0012547_3624_4940 338
3 3300049569 Ga0501032_0017373 Ga0501032_0017373_2562_3782 364
4 3300049570 Ga0501033_0004070 Ga0501033_0004070_9128_10348 364
5 3300049574 Ga0501038_0031857 Ga0501038_0031857_123_1343 364
6 3300049589 Ga0501073_0007492 Ga0501073_0007492_2420_3640 364
7 3300048929 Ga0496126_0194558 Ga0496126_0194558_14_1120 368
8 3300053139 Ga0500568_0003069 Ga0500568_0003069_6126_7310 369
9 3300049581 Ga0501047_0168028 Ga0501047_0168028_122_1342 370
10 3300049822 Ga0501035_0082682 Ga0501035_0082682_1252_2472 370
11 3300048921 Ga0496118_0002615 Ga0496118_0002615_4732_5949 371
12 3300005367 Ga0070667_100023372 Ga0070667_1000233723 372
13 3300005617 Ga0068859_100000084 Ga0068859_10000008410 372
14 3300005843 Ga0068860_100048106 Ga0068860_1000481063 372
15 3300005844 Ga0068862_100001460 Ga0068862_1000014606 372
16 3300006931 Ga0097620_100000084 Ga0097620_10000008473 372
17 3300009545 Ga0105237_10023245 Ga0105237_100232452 372
18 3300025914 Ga0207671_10217705 Ga0207671_102177051 372
19 3300028380 Ga0268265_10000072 Ga0268265_1000007227 372
20 3300005548 Ga0070665_100134894 Ga0070665_1001348942 373
21 3300013104 Ga0157370_10124951 Ga0157370_101249512 373
22 3300013307 Ga0157372_10005096 Ga0157372_100050969 373
23 3300005347 Ga0070668_100080721 Ga0070668_1000807213 377
24 3300025914 Ga0207671_10011021 Ga0207671_100110218 377
25 3300046558 Ga0495633_0028391 Ga0495633_0028391_551_1786 377
26 3300005548 Ga0070665_100000333 Ga0070665_10000033314 378
27 3300028379 Ga0268266_10000001 Ga0268266_10000001901 378
28 3300053079 Ga0500610_0002927 Ga0500610_0002927_5028_6254 378
29 3300045049 Ga0466959_0087610 Ga0466959_0087610_708_1949 380
30 3300053117 Ga0500593_071817 Ga0500593_071817_263_1480 380
31 3300005455 Ga0070663_100084052 Ga0070663_1000840521 382
32 3300005548 Ga0070665_100029143 Ga0070665_1000291435 382
33 3300013297 Ga0157378_10000042 Ga0157378_1000004285 382
34 3300049823 Ga0501044_0235988 Ga0501044_0235988_143_1360 382
35 3300044658 Ga0466972_0004596 Ga0466972_0004596_33_1292 383
36 3300044765 Ga0466970_0000560 Ga0466970_0000560_111_1370 383
37 3300049568 Ga0501031_0014790 Ga0501031_0014790_1910_3133 384
38 3300049569 Ga0501032_0009603 Ga0501032_0009603_1423_2646 384
39 3300049570 Ga0501033_0062430 Ga0501033_0062430_1240_2463 384
40 3300049571 Ga0501034_0012840 Ga0501034_0012840_6732_7955 384
41 3300049574 Ga0501038_0189491 Ga0501038_0189491_408_1631 384
42 3300049575 Ga0501039_0041368 Ga0501039_0041368_25_1248 384
43 3300049576 Ga0501040_0006938 Ga0501040_0006938_4308_5531 384
44 3300049578 Ga0501042_0034556 Ga0501042_0034556_1108_2331 384
45 3300049579 Ga0501043_0012374 Ga0501043_0012374_1910_3133 384
46 3300049580 Ga0501046_0025850 Ga0501046_0025850_2511_3734 384
47 3300049581 Ga0501047_0014856 Ga0501047_0014856_2312_3535 384
48 3300049582 Ga0501048_0004916 Ga0501048_0004916_1444_2667 384
49 3300049583 Ga0501067_0001190 Ga0501067_0001190_5901_7124 384
50 3300049585 Ga0501069_0001514 Ga0501069_0001514_1910_3133 384
51 3300049586 Ga0501070_0043152 Ga0501070_0043152_25_1248 384
52 3300049587 Ga0501071_0022482 Ga0501071_0022482_3148_4371 384
53 3300049588 Ga0501072_0013892 Ga0501072_0013892_1844_3067 384
54 3300049590 Ga0501074_0018335 Ga0501074_0018335_1549_2772 384
55 3300049741 Ga0501079_0010234 Ga0501079_0010234_2312_3535 384
56 3300049742 Ga0501080_0093090 Ga0501080_0093090_1551_2774 384
57 3300049743 Ga0501081_0015722 Ga0501081_0015722_1623_2846 384
58 3300049744 Ga0501083_0002813 Ga0501083_0002813_10757_11980 384
59 3300049822 Ga0501035_0013102 Ga0501035_0013102_1906_3129 384
60 3300049823 Ga0501044_0005651 Ga0501044_0005651_11721_12944 384
61 3300054114 Ga0501084_0058785 Ga0501084_0058785_649_1872 384
62 3300009545 Ga0105237_10178128 Ga0105237_101781283 385
63 3300053093 Ga0500651_0007367 Ga0500651_0007367_309_1538 385
64 3300005367 Ga0070667_100000012 Ga0070667_10000001211 386
65 3300025941 Ga0207711_10010635 Ga0207711_100106355 386
66 3300025961 Ga0207712_10004889 Ga0207712_100048894 386
67 3300025986 Ga0207658_10000614 Ga0207658_1000061414 386
68 3300048916 Ga0496113_0272079 Ga0496113_0272079_56_1273 386
69 3300027360 Ga0209969_1002717 Ga0209969_10027172 387
70 3300027424 Ga0209984_1002816 Ga0209984_10028163 387
71 3300027543 Ga0209999_1007654 Ga0209999_10076541 387
72 3300027552 Ga0209982_1002265 Ga0209982_10022652 387
73 3300027665 Ga0209983_1003373 Ga0209983_10033732 387
74 3300027682 Ga0209971_1001206 Ga0209971_10012063 387
75 3300027876 Ga0209974_10003525 Ga0209974_100035253 387
76 3300053087 Ga0500643_008051 Ga0500643_008051_733_2037 387
77 3300053120 Ga0500597_000089 Ga0500597_000089_8832_10136 387
78 3300005548 Ga0070665_100021083 Ga0070665_1000210832 388
79 3300013104 Ga0157370_10263557 Ga0157370_102635572 388
80 3300026023 Ga0207677_10116009 Ga0207677_101160092 388
81 3300027876 Ga0209974_10032157 Ga0209974_100321571 388
82 3300028379 Ga0268266_10017318 Ga0268266_100173184 388
83 3300048908 Ga0496105_0221357 Ga0496105_0221357_34_1230 388
84 3300048928 Ga0496125_0080898 Ga0496125_0080898_27_1193 388
85 3300049571 Ga0501034_0008337 Ga0501034_0008337_2144_3346 389
86 iso_pu_bacteria 2643221577 2643893904 389
87 iso_pu_bacteria 2643221685 2644476123 389
88 3300005353 Ga0070669_100029199 Ga0070669_1000291991 390
89 3300006237 Ga0097621_100018369 Ga0097621_1000183694 390
90 3300006358 Ga0068871_100021996 Ga0068871_1000219962 390
91 3300009545 Ga0105237_10001831 Ga0105237_1000183111 390
92 3300025923 Ga0207681_10022499 Ga0207681_100224994 390
93 3300025942 Ga0207689_10039271 Ga0207689_100392713 390
94 3300048921 Ga0496118_0000219 Ga0496118_0000219_12894_14129 390
95 3300049581 Ga0501047_0245413 Ga0501047_0245413_32_1258 391
96 3300025905 Ga0207685_10028229 Ga0207685_100282291 393
97 3300025949 Ga0207667_10077216 Ga0207667_100772162 393
98 3300026041 Ga0207639_10018720 Ga0207639_100187202 393
99 3300026116 Ga0207674_10332087 Ga0207674_103320871 393
100 3300049586 Ga0501070_0190499 Ga0501070_0190499_84_1268 393
101 3300049586 Ga0501070_0257304 Ga0501070_0257304_144_1361 393
102 3300049742 Ga0501080_0085996 Ga0501080_0085996_70_1254 393
103 3300049823 Ga0501044_0043525 Ga0501044_0043525_2239_3423 393
104 3300053136 Ga0500559_0017796 Ga0500559_0017796_107_1291 393
105 iso_pu_bacteria 2765235840 2765580055 393
106 3300005347 Ga0070668_100002865 Ga0070668_1000028653 394
107 3300005841 Ga0068863_100005548 Ga0068863_10000554810 394
108 3300026088 Ga0207641_10075153 Ga0207641_100751532 394
109 3300049581 Ga0501047_0081876 Ga0501047_0081876_67_1284 394
110 3300049823 Ga0501044_0007454 Ga0501044_0007454_9491_10708 394
111 3300009093 Ga0105240_10039441 Ga0105240_100394416 395
112 3300009551 Ga0105238_10369865 Ga0105238_103698652 395
113 3300025911 Ga0207654_10156052 Ga0207654_101560522 395
114 3300005471 Ga0070698_100124536 Ga0070698_1001245362 396
115 3300032002 Ga0307416_100056699 Ga0307416_1000566992 396
116 3300050493 nmdc:mga0k408_3049_c1 nmdc:mga0k408_3049_c1_3961_5166 396
117 3300003320 rootH2_10019034 rootH2_100190343 397
118 3300006844 Ga0075428_100243648 Ga0075428_1002436481 397
119 3300009147 Ga0114129_10368481 Ga0114129_103684812 397
120 3300015261 Ga0182006_1011688 Ga0182006_10116882 397
121 3300027312 Ga0209371_1000007 Ga0209371_1000007548 397
122 3300030500 Ga0268256_1000008 Ga0268256_1000008402 397
123 3300041451 Ga0451791_1665661 Ga0451791_1665661_1994_3190 397
124 3300041494 Ga0451837_0134979 Ga0451837_0134979_1554_2750 397
125 3300048920 Ga0496117_0113019 Ga0496117_0113019_26_1219 397
126 3300009093 Ga0105240_10116546 Ga0105240_101165462 399
127 3300009177 Ga0105248_10000775 Ga0105248_1000077511 399
128 3300009553 Ga0105249_10009481 Ga0105249_100094817 399
129 3300010375 Ga0105239_10196776 Ga0105239_101967762 399
130 3300047472 Ga0495686_0003124 Ga0495686_0003124_8953_10257 399
131 3300048924 Ga0496121_0093131 Ga0496121_0093131_866_2170 399
132 3300048925 Ga0496122_0000906 Ga0496122_0000906_39356_40660 399
133 3300048926 Ga0496123_0001225 Ga0496123_0001225_29862_31166 399
134 3300048929 Ga0496126_0054772 Ga0496126_0054772_311_1615 399
135 3300049568 Ga0501031_0015242 Ga0501031_0015242_382_1596 402
136 3300049569 Ga0501032_0091457 Ga0501032_0091457_362_1576 402
137 3300049570 Ga0501033_0059717 Ga0501033_0059717_281_1495 402
138 3300049571 Ga0501034_0166273 Ga0501034_0166273_624_1838 402
139 3300049573 Ga0501037_0088927 Ga0501037_0088927_251_1465 402
140 3300049574 Ga0501038_0010996 Ga0501038_0010996_6639_7853 402
141 3300049575 Ga0501039_0167170 Ga0501039_0167170_149_1363 402
142 3300049580 Ga0501046_0111136 Ga0501046_0111136_428_1642 402
143 3300049581 Ga0501047_0075270 Ga0501047_0075270_1580_2794 402
144 3300049742 Ga0501080_0019103 Ga0501080_0019103_4702_5916 402
145 3300049822 Ga0501035_0011453 Ga0501035_0011453_5931_7145 402
146 3300005530 Ga0070679_100257931 Ga0070679_1002579312 403
147 3300046461 Ga0495641_0045421 Ga0495641_0045421_254_1468 403
148 iso_pu_bacteria 2576861471 2578457430 403
149 iso_pu_bacteria 2852649853 2852649857 403
150 iso_pu_bacteria 2857442823 2857446924 403
151 iso_pu_bacteria 2939589442 2939591296 403
152 iso_pu_bacteria 2941475908 2941476798 403
153 iso_pu_bacteria 2974307012 2974308054 403
154 iso_pu_bacteria 2977247770 2977248786 403
155 iso_pu_bacteria 2984514374 2984516739 403
156 3300053093 Ga0500651_0002746 Ga0500651_0002746_3288_4508 404
157 iso_pu_bacteria 2547132130 2547503312 404
158 iso_pu_bacteria 2747842428 2747950238 404
159 iso_pu_bacteria 2842391507 2842395245 404
160 iso_pu_bacteria 2874220319 2874222743 404
161 iso_pu_bacteria 2919089067 2919093127 404
162 iso_pu_bacteria 2919134579 2919138115 404
163 iso_pu_bacteria 2928496128 2928500032 404
164 iso_pu_bacteria 2931380184 2931383795 404
165 iso_pu_bacteria 2937610967 2937615069 404
166 iso_pu_bacteria 2939626828 2939629387 404
167 iso_pu_bacteria 2961047084 2961049508 404
168 3300005458 Ga0070681_10064643 Ga0070681_100646434 405
169 3300005539 Ga0068853_100069318 Ga0068853_1000693181 405
170 3300005983 Ga0081540_1008352 Ga0081540_10083526 405
171 3300021361 Ga0213872_10000223 Ga0213872_1000022336 405
172 3300041512 Ga0451853_0069786 Ga0451853_0069786_2115_3338 405
173 3300049822 Ga0501035_0176257 Ga0501035_0176257_372_1595 405
174 3300005539 Ga0068853_100001939 Ga0068853_1000019394 406
175 3300005841 Ga0068863_100003282 Ga0068863_1000032827 406
176 3300009553 Ga0105249_10023339 Ga0105249_100233394 406
177 3300010375 Ga0105239_10006003 Ga0105239_100060034 406
178 3300026067 Ga0207678_10002485 Ga0207678_1000248512 406
179 3300026088 Ga0207641_10066090 Ga0207641_100660903 406
180 3300028379 Ga0268266_10023402 Ga0268266_100234024 406
181 3300041452 Ga0451793_0051508 Ga0451793_0051508_523_1755 406
182 3300048925 Ga0496122_0005846 Ga0496122_0005846_1530_2750 406
183 3300048926 Ga0496123_0000835 Ga0496123_0000835_11639_12859 406
184 3300048927 Ga0496124_0005700 Ga0496124_0005700_11543_12763 406
185 3300049744 Ga0501083_0035393 Ga0501083_0035393_1471_2697 406
186 3300060353 Ga0501082_0000429 Ga0501082_0000429_13259_14485 406
187 iso_pu_bacteria 2842757796 2842758755 406
188 3300002738 JGI25154J39366_1000892 JGI25154J39366_100089211 407
189 3300003771 Ga0055526_1002347 Ga0055526_10023474 407
190 3300003773 Ga0055537_1001680 Ga0055537_10016804 407
191 3300003781 Ga0055536_1001811 Ga0055536_10018113 407
192 3300003781 Ga0055536_1016398 Ga0055536_10163983 407
193 3300003781 Ga0055536_1016476 Ga0055536_10164762 407
194 3300003784 Ga0055534_1000065 Ga0055534_100006553 407
195 3300003790 Ga0055528_1000778 Ga0055528_100077814 407
196 3300003791 Ga0055530_10001637 Ga0055530_100016372 407
197 3300003791 Ga0055530_10002305 Ga0055530_100023058 407
198 3300003794 Ga0055531_10021740 Ga0055531_100217403 407
199 3300005289 Ga0065704_10081056 Ga0065704_100810563 407
200 3300005456 Ga0070678_100131032 Ga0070678_1001310322 407
201 3300005577 Ga0068857_100155364 Ga0068857_1001553642 407
202 3300006051 Ga0075364_10042040 Ga0075364_100420402 407
203 3300010375 Ga0105239_10295720 Ga0105239_102957202 407
204 3300013100 Ga0157373_10122917 Ga0157373_101229172 407
205 3300013102 Ga0157371_10000588 Ga0157371_1000058819 407
206 3300017792 Ga0163161_10062658 Ga0163161_100626582 407
207 3300025263 Ga0209565_1000023 Ga0209565_1000023310 407
208 3300025273 Ga0209673_1000308 Ga0209673_100030862 407
209 3300025273 Ga0209673_1000853 Ga0209673_100085311 407
210 3300025291 Ga0209675_1000048 Ga0209675_10000488 407
211 3300025292 Ga0209676_1000353 Ga0209676_10003533 407
212 3300025292 Ga0209676_1006700 Ga0209676_10067002 407
213 3300025295 Ga0209564_1000106 Ga0209564_1000106109 407
214 3300025298 Ga0209050_1001028 Ga0209050_100102811 407
215 3300025298 Ga0209050_1001178 Ga0209050_100117816 407
216 3300025299 Ga0209256_1003203 Ga0209256_10032038 407
217 3300025303 Ga0209051_1021054 Ga0209051_10210542 407
218 3300025303 Ga0209051_1024724 Ga0209051_10247242 407
219 3300025304 Ga0209257_1000062 Ga0209257_1000062208 407
220 3300025304 Ga0209257_1002399 Ga0209257_10023992 407
221 3300025304 Ga0209257_1008168 Ga0209257_10081684 407
222 3300026041 Ga0207639_10001250 Ga0207639_1000125016 407
223 3300026116 Ga0207674_10198719 Ga0207674_101987192 407
224 3300026121 Ga0207683_10100705 Ga0207683_101007052 407
225 3300031911 Ga0307412_10020773 Ga0307412_100207734 407
226 3300046460 Ga0495638_0061227 Ga0495638_0061227_327_1550 407
227 3300046512 Ga0495610_0023776 Ga0495610_0023776_1204_2427 407
228 3300046518 Ga0495631_0018562 Ga0495631_0018562_854_2077 407
229 3300046522 Ga0495643_0012422 Ga0495643_0012422_1519_2742 407
230 3300047320 Ga0495672_0000704 Ga0495672_0000704_12713_13936 407
231 3300047472 Ga0495686_0031773 Ga0495686_0031773_1367_2590 407
232 3300048921 Ga0496118_0051472 Ga0496118_0051472_1199_2422 407
233 3300048922 Ga0496119_0001070 Ga0496119_0001070_1310_2533 407
234 3300048923 Ga0496120_0002048 Ga0496120_0002048_19290_20513 407
235 3300048924 Ga0496121_0028255 Ga0496121_0028255_3410_4633 407
236 3300048928 Ga0496125_0005599 Ga0496125_0005599_332_1555 407
237 3300048928 Ga0496125_0072938 Ga0496125_0072938_758_1981 407
238 3300003771 Ga0055526_1000052 Ga0055526_10000528 408
239 3300005458 Ga0070681_10000007 Ga0070681_1000000791 408
240 3300021384 Ga0213876_10001833 Ga0213876_100018335 408
241 3300025912 Ga0207707_10000058 Ga0207707_1000005859 408
242 3300039437 Ga0436365_1383407 Ga0436365_1383407_75137_76411 408
243 3300049568 Ga0501031_0067839 Ga0501031_0067839_617_1864 410
244 3300049570 Ga0501033_0000565 Ga0501033_0000565_1983_3230 410
245 3300053161 Ga0500634_0000128 Ga0500634_0000128_15705_16952 410
246 3300048920 Ga0496117_0002502 Ga0496117_0002502_20190_21425 411
247 3300048922 Ga0496119_0004408 Ga0496119_0004408_11478_12713 411
248 3300048923 Ga0496120_0000355 Ga0496120_0000355_62482_63717 411
249 3300049585 Ga0501069_0104318 Ga0501069_0104318_244_1509 411
250 iso_pu_bacteria 2643221603 2644027487 411
251 iso_pu_bacteria 2816332141 2816518902 411
252 iso_pu_bacteria 2961064222 2961066868 411
253 iso_pu_bacteria 8003014200 8003016443 411
254 iso_pu_bacteria 2524614729 2525556961 412
255 iso_pu_bacteria 2627854209 2630648557 412
256 iso_pu_bacteria 2747842501 2748017128 412
257 iso_pu_bacteria 2818991457 2819660399 412
258 iso_pu_bacteria 2852684882 2852689067 412
259 iso_pu_bacteria 2919130084 2919130334 412
260 iso_pu_bacteria 2929195423 2929198662 412
261 iso_pu_bacteria 8021622325 8021625992 412
262 iso_pu_bacteria 8021626552 8021626601 412
263 iso_pu_bacteria 8021648035 8021651755 412
264 3300005547 Ga0070693_100037547 Ga0070693_1000375472 413
265 3300049579 Ga0501043_0008993 Ga0501043_0008993_2032_3282 413
266 3300046453 Ga0495627_008900 Ga0495627_008900_2235_3479 414
267 3300046460 Ga0495638_0002106 Ga0495638_0002106_884_2128 414
268 3300048920 Ga0496117_0026883 Ga0496117_0026883_799_2043 414
269 3300048920 Ga0496117_0030349 Ga0496117_0030349_2454_3698 414
270 3300048921 Ga0496118_0004364 Ga0496118_0004364_13067_14311 414
271 3300048921 Ga0496118_0020701 Ga0496118_0020701_1922_3166 414
272 3300048921 Ga0496118_0042831 Ga0496118_0042831_2123_3367 414
273 3300048927 Ga0496124_0011403 Ga0496124_0011403_5024_6268 414
274 3300002773 JGI25152J39213_1000146 JGI25152J39213_100014633 415
275 3300002774 JGI25150J39212_1000120 JGI25150J39212_100012013 415
276 3300003187 JGI25151J46595_10000107 JGI25151J46595_1000010733 415
277 3300003215 JGI25153J46596_10000078 JGI25153J46596_1000007833 415
278 3300003856 Ga0058692_1000011 Ga0058692_1000011152 415
279 3300005539 Ga0068853_100061226 Ga0068853_1000612262 415
280 3300005985 Ga0081539_10025920 Ga0081539_100259202 415
281 3300013102 Ga0157371_10053790 Ga0157371_100537901 415
282 3300013105 Ga0157369_10106820 Ga0157369_101068202 415
283 3300015261 Ga0182006_1040109 Ga0182006_10401091 415
284 3300025245 Ga0207425_1000028 Ga0207425_100002877 415
285 3300025258 Ga0209129_1000065 Ga0209129_100006525 415
286 3300025294 Ga0209025_1000002 Ga0209025_1000002195 415
287 3300025297 Ga0209758_1000003 Ga0209758_1000003202 415
288 3300026041 Ga0207639_10023823 Ga0207639_100238232 415
289 3300048919 Ga0496116_0045538 Ga0496116_0045538_1204_2454 415
290 3300048924 Ga0496121_0047198 Ga0496121_0047198_1913_3163 415
291 3300048927 Ga0496124_0152511 Ga0496124_0152511_510_1760 415
292 3300003856 Ga0058692_1000017 Ga0058692_1000017101 416
293 3300005289 Ga0065704_10071419 Ga0065704_100714195 416
294 3300005331 Ga0070670_100001792 Ga0070670_10000179210 416
295 3300006195 Ga0075366_10002801 Ga0075366_1000280110 416
296 3300025735 Ga0207713_1000282 Ga0207713_10002827 416
297 3300025925 Ga0207650_10029499 Ga0207650_100294991 416
298 3300025935 Ga0207709_10005838 Ga0207709_100058382 416
299 3300027312 Ga0209371_1000044 Ga0209371_1000044158 416
300 3300030500 Ga0268256_1000046 Ga0268256_1000046158 416
301 3300041459 Ga0451800_0479895 Ga0451800_0479895_2526_3776 416
302 3300041462 Ga0451806_059732 Ga0451806_059732_9690_10940 416
303 3300046513 Ga0495616_0035700 Ga0495616_0035700_653_1903 416
304 3300049823 Ga0501044_0073284 Ga0501044_0073284_795_2081 417
305 3300048927 Ga0496124_0061186 Ga0496124_0061186_1002_2258 418
306 3300047320 Ga0495672_0021726 Ga0495672_0021726_558_1895 421
307 3300048927 Ga0496124_0004234 Ga0496124_0004234_14919_16283 421
308 3300026118 Ga0207675_100040260 Ga0207675_1000402602 422
309 iso_pu_bacteria 2939622612 2939625806 425
310 3300048925 Ga0496122_0024459 Ga0496122_0024459_3025_4326 426
311 3300048926 Ga0496123_0026047 Ga0496123_0026047_1190_2491 426
312 3300013104 Ga0157370_10031192 Ga0157370_100311923 427
313 3300014497 Ga0182008_10000509 Ga0182008_100005092 427
314 3300017792 Ga0163161_10064792 Ga0163161_100647922 427
315 3300030732 Ga0316176_1073551 Ga0316176_10735513 427
316 3300048920 Ga0496117_0004069 Ga0496117_0004069_826_2136 427
317 3300048921 Ga0496118_0001072 Ga0496118_0001072_14939_16249 427
318 3300048928 Ga0496125_0042627 Ga0496125_0042627_2310_3647 427
319 3300048928 Ga0496125_0072719 Ga0496125_0072719_831_2141 427
320 3300015262 Ga0182007_10000191 Ga0182007_1000019120 428
321 3300015265 Ga0182005_1003623 Ga0182005_10036233 428
322 3300048919 Ga0496116_0060350 Ga0496116_0060350_820_2133 428
323 3300048925 Ga0496122_0042306 Ga0496122_0042306_865_2178 428
324 3300048927 Ga0496124_0005362 Ga0496124_0005362_11850_13163 428
325 3300048927 Ga0496124_0067253 Ga0496124_0067253_1195_2508 428
326 3300009148 Ga0105243_10069116 Ga0105243_100691162 447
327 2162886007 SwRhRL2b_contig_2067340 SwRhRL2b_0668.00005660 450

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

59

409

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6euq-assembly1.cif.gz_A mdfa(q131r/l339e) 0.9351 44 428
4zow-assembly1.cif.gz_A crystal structure of e. coli multidrug transporter mdfa in complex with chloramphenicol 0.9347 42 427
6oom-assembly2.cif.gz_A-2 protein a 0.9344 42 428
6euq-assembly1.cif.gz_A mdfa(q131r/l339e) 0.9258 44 428
6vs2-assembly1.cif.gz_A protein d 0.922 41 427
ID Description Score Start End Superfamily
af_P28246_11_389_1.20.1720.10 Mainly Alpha;Up-down Bundle;Multidrug resistance protein D;Multidrug resistance protein D 0.9379 46 423 1.20.1720.10
af_P9WJX3_18_194_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9376 43 217 1.20.1250.20
af_O43081_53_265_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9363 42 227 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9342 48 233 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9294 41 218 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A5C8LPL0-F1-model_v4 Bcr/CflA family efflux transporter 0.9297 42 360 GO:0005886
GO:0042910
GO:1990961
AF-A0A1G5YA75-F1-model_v4 deleted 0.9235 41 322
AF-A0A3S7UJA0-F1-model_v4 deleted 0.9221 41 428
AF-A0A6N3RVD1-F1-model_v4 deleted 0.917 42 233
AF-A0A7V5C9K5-F1-model_v4 MFS transporter 0.9141 31 268 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
83.53 0.82 High
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Predicted Structure (AlphaFold2)

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