F408987

General Info

Members Datasets Scaffolds Average Seq Length
327 186 654 329

Family's Representative Sequence

Representative Sequence 3300050514|nmdc:mga08x19_41957_c1|nmdc:mga08x19_41957_c1_58_1218
Length 376
Sequence MRKQRPLPALPRKRGREKKARSLRSRAILLPAIDGIHAIWEETMKTHRRLLATLAVVAIAPAFVFLSAPASAQDIYPTRPLRMVIPFAAGGPTDIVGRIMGNKMGTLLGQQVVVENRTGAGGNIGADVVSKSPADGYTLLMATVSTHAINPGLYRQMPYNPIRDFAPVGRIGVTPTLLGVNPSLPVTDAKSLIALVRANPGKYSFGSSGVGSILHLCGEEFKAKAGGLVMVHVPYRGSAPMDTDLVGGQIAMAFDATPTAMPLAKAGAIRAIGAGMAKRIKEMPELPTLQEQGLAGFECYTWNAILAPAGTPAAIVDKLNKAINDALVDPAVFVALEKTGIDPTPGSTPASTATFVKDELAKWAPIIEASGARIEY

Samples

Sample ID Description Type Environment
1 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
86 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
87 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
88 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
134 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
138 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
139 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
140 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
141 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
142 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
143 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
144 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
147 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
148 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
149 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
150 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
151 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
152 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
153 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
154 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
155 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
156 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
157 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
158 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
159 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
160 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
161 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
162 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
163 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
164 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
165 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
166 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
167 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
168 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
169 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
170 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
171 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
172 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
173 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
174 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
175 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
176 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
177 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
178 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.22
Nodule 0
Rhizoplane 0.31
Rhizosphere 97.86
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08x19_41957_c1 3300050514 Bacteria 2915
2 Ga0070676_10040323 3300005328 Bacteria 2704
3 Ga0070676_10127573 3300005328 Bacteria 1605
4 Ga0070690_100000075 3300005330 Bacteria 48451
5 Ga0068869_100000841 3300005334 Bacteria 17573
6 Ga0070680_100001183 3300005336 Bacteria 18770
7 Ga0070680_100076147 3300005336 Bacteria 2762
8 Ga0070682_100027630 3300005337 Bacteria 3406
9 Ga0068868_100000329 3300005338 Bacteria 31993
10 Ga0070689_100000481 3300005340 Bacteria 23552
11 Ga0070691_10005075 3300005341 Bacteria 5984
12 Ga0070687_100000014 3300005343 Bacteria 57432
13 Ga0070687_100060931 3300005343 Bacteria 1993
14 Ga0070692_10000041 3300005345 Bacteria 24940
15 Ga0070692_10020565 3300005345 Bacteria 3202
16 Ga0070669_100000504 3300005353 Bacteria 29420
17 Ga0070669_100255714 3300005353 Bacteria 1396
18 Ga0070675_100017952 3300005354 Bacteria 5628
19 Ga0070675_100122747 3300005354 Bacteria 2208
20 Ga0070674_100006161 3300005356 Bacteria 6974
21 Ga0070674_100047236 3300005356 Bacteria 2948
22 Ga0070673_100152053 3300005364 Bacteria 1961
23 Ga0070673_100268905 3300005364 Bacteria 1491
24 Ga0070667_100188847 3300005367 Bacteria 1824
25 Ga0070714_100219527 3300005435 Bacteria 1746
26 Ga0070713_100068402 3300005436 Bacteria 2992
27 Ga0070701_10001151 3300005438 Bacteria 9659
28 Ga0070701_10086295 3300005438 Bacteria 1710
29 Ga0070705_100000289 3300005440 Bacteria 29972
30 Ga0070700_100000250 3300005441 Bacteria 29063
31 Ga0070700_100000885 3300005441 Bacteria 14788
32 Ga0070700_100195269 3300005441 Bacteria 1418
33 Ga0070694_100000099 3300005444 Bacteria 41966
34 Ga0070694_100324918 3300005444 Bacteria 1185
35 Ga0070678_100081259 3300005456 Bacteria 2456
36 Ga0070678_100101667 3300005456 Bacteria 2229
37 Ga0070678_100222471 3300005456 Bacteria 1569
38 Ga0068867_100000142 3300005459 Bacteria 45988
39 Ga0068867_100000174 3300005459 Bacteria 41996
40 Ga0068867_100046291 3300005459 Bacteria 3195
41 Ga0070698_100084218 3300005471 Bacteria 3168
42 Ga0070679_100036475 3300005530 Bacteria 4879
43 Ga0070672_100060538 3300005543 Bacteria 2981
44 Ga0070686_100000134 3300005544 Bacteria 51357
45 Ga0070695_100000018 3300005545 Bacteria 63499
46 Ga0070695_100083825 3300005545 Bacteria 2113
47 Ga0070696_100000310 3300005546 Bacteria 29603
48 Ga0070693_100000021 3300005547 Bacteria 59618
49 Ga0070665_100033080 3300005548 Bacteria 5203
50 Ga0070704_100000043 3300005549 Bacteria 42411
51 Ga0070704_100002864 3300005549 Bacteria 9778
52 Ga0070704_100061740 3300005549 Bacteria 2684
53 Ga0070704_100191298 3300005549 Bacteria 1645
54 Ga0068855_100003693 3300005563 Bacteria 18714
55 Ga0068854_100002225 3300005578 Bacteria 11931
56 Ga0068856_100140651 3300005614 Bacteria 2421
57 Ga0070702_100000007 3300005615 Bacteria 65238
58 Ga0070702_100013488 3300005615 Bacteria 4126
59 Ga0068852_100067142 3300005616 Bacteria 3135
60 Ga0068859_100001320 3300005617 Bacteria 25307
61 Ga0068859_100170739 3300005617 Bacteria 2255
62 Ga0068859_100217730 3300005617 Bacteria 1997
63 Ga0068864_100176034 3300005618 Bacteria 1953
64 Ga0068866_10000561 3300005718 Bacteria 16983
65 Ga0068861_100000318 3300005719 Bacteria 27034
66 Ga0068861_100000617 3300005719 Bacteria 21065
67 Ga0068870_10006544 3300005840 Bacteria 5139
68 Ga0068863_100273369 3300005841 Bacteria 1636
69 Ga0068858_100000334 3300005842 Bacteria 49778
70 Ga0068858_100426448 3300005842 Bacteria 1276
71 Ga0068860_100001410 3300005843 Bacteria 26069
72 Ga0068860_100125796 3300005843 Bacteria 2457
73 Ga0068862_100000688 3300005844 Bacteria 34533
74 Ga0068862_100000761 3300005844 Bacteria 32119
75 Ga0081455_10083512 3300005937 Bacteria 2610
76 Ga0081455_10134959 3300005937 Unclassified 1924
77 Ga0081540_1011598 3300005983 Bacteria 5882
78 Ga0081539_10000803 3300005985 Bacteria 61113
79 Ga0081539_10001448 3300005985 Bacteria 40582
80 Ga0081539_10036097 3300005985 Bacteria 2962
81 Ga0070717_10105875 3300006028 Bacteria 2394
82 Ga0070715_10027494 3300006163 Bacteria 2272
83 Ga0070715_10038558 3300006163 Bacteria 1984
84 Ga0070712_100129296 3300006175 Bacteria 1912
85 Ga0070712_100143598 3300006175 Bacteria 1824
86 Ga0097621_100000593 3300006237 Bacteria 25510
87 Ga0097621_100178144 3300006237 Bacteria 1836
88 Ga0068871_100000157 3300006358 Bacteria 44850
89 Ga0075428_100001267 3300006844 Bacteria 26940
90 Ga0075428_100222960 3300006844 Bacteria 2035
91 Ga0075428_100269563 3300006844 Unclassified 1832
92 Ga0075430_100280924 3300006846 Bacteria 1377
93 Ga0075431_100000947 3300006847 Bacteria 25624
94 Ga0075431_100046121 3300006847 Bacteria 4493
95 Ga0075431_100151605 3300006847 Bacteria 2387
96 Ga0075433_10001495 3300006852 Bacteria 17266
97 Ga0075433_10248587 3300006852 Bacteria 1578
98 Ga0075434_100000989 3300006871 Bacteria 23001
99 Ga0075434_100004412 3300006871 Bacteria 12676
100 Ga0075434_100117073 3300006871 Bacteria 2678
101 Ga0075434_100122573 3300006871 Bacteria 2615
102 Ga0075434_100225935 3300006871 Bacteria 1892
103 Ga0075434_100284727 3300006871 Bacteria 1672
104 Ga0075429_100000046 3300006880 Bacteria 56781
105 Ga0075429_100002241 3300006880 Bacteria 16171
106 Ga0075429_100040273 3300006880 Bacteria 4067
107 Ga0075429_100111788 3300006880 Bacteria 2388
108 Ga0068865_100000296 3300006881 Bacteria 27405
109 Ga0075436_100000190 3300006914 Bacteria 37988
110 Ga0075436_100006361 3300006914 Bacteria 8094
111 Ga0075436_100032584 3300006914 Bacteria 3592
112 Ga0075436_100063919 3300006914 Bacteria 2543
113 Ga0075436_100134527 3300006914 Bacteria 1735
114 Ga0097620_100001320 3300006931 Bacteria 25307
115 Ga0097620_100170745 3300006931 Bacteria 2255
116 Ga0097620_100217716 3300006931 Bacteria 1997
117 Ga0075435_100000058 3300007076 Bacteria 56883
118 Ga0075435_100034547 3300007076 Bacteria 4007
119 Ga0099794_10016238 3300007265 Bacteria 3298
120 Ga0099795_10094579 3300007788 Bacteria 1163
121 Ga0105240_10181745 3300009093 Bacteria 2481
122 Ga0111539_10005180 3300009094 Bacteria 16890
123 Ga0111539_10010601 3300009094 Bacteria 11606
124 Ga0111539_10017883 3300009094 Bacteria 8779
125 Ga0111539_10020580 3300009094 Bacteria 8125
126 Ga0111539_10080211 3300009094 Bacteria 3839
127 Ga0111539_10090468 3300009094 Bacteria 3597
128 Ga0111539_10219258 3300009094 Bacteria 2216
129 Ga0105245_10000405 3300009098 Bacteria 40004
130 Ga0105247_10114963 3300009101 Bacteria 1736
131 Ga0114129_10000177 3300009147 Bacteria 70549
132 Ga0114129_10012246 3300009147 Bacteria 12205
133 Ga0114129_10253336 3300009147 Bacteria 2362
134 Ga0114129_10276921 3300009147 Bacteria 2243
135 Ga0114129_10527542 3300009147 Bacteria 1539
136 Ga0105243_10000466 3300009148 Bacteria 41868
137 Ga0105243_10001571 3300009148 Bacteria 19964
138 Ga0105242_10000191 3300009176 Bacteria 47337
139 Ga0105242_10336464 3300009176 Bacteria 1390
140 Ga0105248_10157829 3300009177 Bacteria 2560
141 Ga0105248_10404762 3300009177 Bacteria 1536
142 Ga0105238_10052212 3300009551 Bacteria 4110
143 Ga0105249_10000555 3300009553 Bacteria 34420
144 Ga0105249_10312318 3300009553 Bacteria 1581
145 Ga0105239_10019995 3300010375 Bacteria 7390
146 Ga0105246_10266110 3300011119 Bacteria 1368
147 Ga0157378_10000196 3300013297 Bacteria 58849
148 Ga0157378_10316203 3300013297 Bacteria 1516
149 Ga0163162_10096393 3300013306 Bacteria 3046
150 Ga0163162_10483322 3300013306 Bacteria 1370
151 Ga0163162_10746474 3300013306 Bacteria 1098
152 Ga0157380_10000362 3300014326 Bacteria 27287
153 Ga0157380_10042163 3300014326 Bacteria 3566
154 Ga0182008_10016716 3300014497 Bacteria 3807
155 Ga0157376_10000314 3300014969 Bacteria 32447
156 Ga0213872_10026316 3300021361 Bacteria 2672
157 Ga0213876_10109220 3300021384 Bacteria 1468
158 Ga0224572_1003080 3300024225 Bacteria 2781
159 Ga0228598_1015984 3300024227 Bacteria 1481
160 Ga0209676_1001738 3300025292 Bacteria 18622
161 Ga0209050_1001259 3300025298 Bacteria 29240
162 Ga0207682_10005584 3300025893 Bacteria 5114
163 Ga0207642_10000935 3300025899 Bacteria 9141
164 Ga0207642_10114117 3300025899 Bacteria 1381
165 Ga0207647_10055506 3300025904 Bacteria 2434
166 Ga0207647_10163759 3300025904 Bacteria 1296
167 Ga0207685_10002270 3300025905 Bacteria 4363
168 Ga0207645_10005001 3300025907 Bacteria 9712
169 Ga0207643_10010088 3300025908 Bacteria 5079
170 Ga0207643_10110498 3300025908 Bacteria 1619
171 Ga0207654_10015875 3300025911 Bacteria 3915
172 Ga0207707_10104330 3300025912 Bacteria 2477
173 Ga0207693_10183701 3300025915 Bacteria 1646
174 Ga0207660_10000284 3300025917 Bacteria 33488
175 Ga0207660_10072174 3300025917 Bacteria 2513
176 Ga0207662_10000063 3300025918 Bacteria 46662
177 Ga0207662_10022529 3300025918 Bacteria 3612
178 Ga0207652_10025478 3300025921 Bacteria 4919
179 Ga0207646_10087596 3300025922 Bacteria 2786
180 Ga0207646_10203444 3300025922 Bacteria 1789
181 Ga0207681_10188001 3300025923 Bacteria 1578
182 Ga0207694_10234270 3300025924 Bacteria 1500
183 Ga0207659_10013498 3300025926 Bacteria 5235
184 Ga0207659_10179459 3300025926 Bacteria 1676
185 Ga0207687_10000976 3300025927 Bacteria 19455
186 Ga0207700_10072319 3300025928 Bacteria 2658
187 Ga0207700_10416781 3300025928 Bacteria 1179
188 Ga0207706_10017226 3300025933 Bacteria 6513
189 Ga0207686_10001089 3300025934 Bacteria 15916
190 Ga0207709_10002870 3300025935 Bacteria 10556
191 Ga0207709_10196652 3300025935 Bacteria 1437
192 Ga0207670_10001425 3300025936 Bacteria 12567
193 Ga0207670_10040980 3300025936 Bacteria 3043
194 Ga0207670_10191067 3300025936 Bacteria 1549
195 Ga0207669_10052163 3300025937 Bacteria 2455
196 Ga0207669_10054462 3300025937 Bacteria 2416
197 Ga0207704_10001148 3300025938 Bacteria 11772
198 Ga0207704_10068458 3300025938 Bacteria 2238
199 Ga0207665_10019703 3300025939 Bacteria 4435
200 Ga0207691_10006284 3300025940 Bacteria 11467
201 Ga0207711_10189683 3300025941 Bacteria 1873
202 Ga0207711_10444829 3300025941 Bacteria 1206
203 Ga0207689_10000214 3300025942 Bacteria 51325
204 Ga0207689_10026928 3300025942 Bacteria 4813
205 Ga0207689_10225631 3300025942 Bacteria 1548
206 Ga0207667_10118827 3300025949 Bacteria 2724
207 Ga0207712_10013116 3300025961 Bacteria 5309
208 Ga0207712_10015947 3300025961 Bacteria 4857
209 Ga0207712_10200743 3300025961 Bacteria 1581
210 Ga0207640_10000972 3300025981 Bacteria 15897
211 Ga0207677_10000714 3300026023 Bacteria 19610
212 Ga0207703_10019199 3300026035 Bacteria 5339
213 Ga0207639_10081158 3300026041 Bacteria 2568
214 Ga0207708_10000117 3300026075 Bacteria 60989
215 Ga0207708_10000446 3300026075 Bacteria 32154
216 Ga0207708_10205498 3300026075 Bacteria 1573
217 Ga0207702_10030059 3300026078 Bacteria 4526
218 Ga0207702_10103138 3300026078 Bacteria 2522
219 Ga0207641_10306864 3300026088 Bacteria 1501
220 Ga0207648_10000293 3300026089 Bacteria 54504
221 Ga0207648_10000982 3300026089 Bacteria 32154
222 Ga0207648_10073573 3300026089 Bacteria 2978
223 Ga0207648_10101084 3300026089 Bacteria 2527
224 Ga0207648_10325079 3300026089 Bacteria 1383
225 Ga0207676_10013697 3300026095 Bacteria 5822
226 Ga0207676_10118387 3300026095 Bacteria 2229
227 Ga0207675_100000218 3300026118 Bacteria 53850
228 Ga0207675_100000763 3300026118 Bacteria 32030
229 Ga0207683_10000979 3300026121 Bacteria 26185
230 Ga0207683_10035443 3300026121 Bacteria 4340
231 Ga0207698_10050156 3300026142 Bacteria 3182
232 Ga0207428_10000517 3300027907 Bacteria 46100
233 Ga0207428_10009830 3300027907 Bacteria 8571
234 Ga0207428_10027604 3300027907 Bacteria 4725
235 Ga0207428_10047213 3300027907 Bacteria 3458
236 Ga0207428_10080014 3300027907 Bacteria 2554
237 Ga0268266_10069316 3300028379 Bacteria 3055
238 Ga0268265_10000956 3300028380 Bacteria 26547
239 Ga0268265_10002587 3300028380 Bacteria 13498
240 Ga0268264_10000609 3300028381 Bacteria 42936
241 Ga0268264_10084407 3300028381 Bacteria 2723
242 Ga0265318_10009461 3300028577 Bacteria 4286
243 Ga0265330_10012862 3300031235 Bacteria 3906
244 Ga0265320_10016051 3300031240 Bacteria 4208
245 Ga0265325_10023499 3300031241 Bacteria 3363
246 Ga0265329_10004762 3300031242 Bacteria 5580
247 Ga0265339_10062068 3300031249 Bacteria 2009
248 Ga0265339_10062461 3300031249 Bacteria 2002
249 Ga0265331_10030286 3300031250 Bacteria 2694
250 Ga0265342_10049986 3300031712 Bacteria 2500
251 Ga0307416_100201861 3300032002 Bacteria 1887
252 Ga0373926_0024979 3300035083 Bacteria 2083
253 Ga0373944_0014363 3300035089 Bacteria 2209
254 Ga0373932_0031800 3300035112 Bacteria 1472
255 Ga0373936_0005642 3300035113 Bacteria 4720
256 Ga0373960_0046775 3300035121 Bacteria 1271
257 Ga0373943_0002249 3300035170 Bacteria 8772
258 Ga0373943_0007703 3300035170 Bacteria 4837
259 Ga0373946_0002273 3300035171 Bacteria 6788
260 Ga0373931_0117167 3300035691 Bacteria 1518
261 Ga0373935_0029109 3300035692 Bacteria 3417
262 Ga0373927_0010809 3300035695 Bacteria 6082
263 Ga0373947_0006407 3300035725 Bacteria 6838
264 Ga0373925_0010575 3300037068 Bacteria 6692
265 Ga0373925_0013238 3300037068 Bacteria 5970
266 Ga0373925_0018438 3300037068 Bacteria 5073
267 Ga0395898_0231743 3300037466 Bacteria 1761
268 Ga0395898_0480477 3300037466 Bacteria 1182
269 Ga0395901_0044772 3300038443 Bacteria 4590
270 Ga0395901_0314801 3300038443 Bacteria 1620
271 Ga0436365_1143517 3300039437 Bacteria 4897
272 Ga0436361_0420682 3300039447 Bacteria 12850
273 Ga0451576_0001387 3300045051 Bacteria 41619
274 Ga0451576_0122361 3300045051 Bacteria 2709
275 Ga0495603_0008792 3300046455 Bacteria 6105
276 Ga0495638_0108942 3300046460 Bacteria 1647
277 Ga0495582_0055039 3300046473 Bacteria 2193
278 Ga0495584_0042747 3300046491 Bacteria 2287
279 Ga0495642_0031875 3300046528 Bacteria 2114
280 Ga0495642_0033482 3300046528 Bacteria 2066
281 Ga0495586_0034781 3300046535 Bacteria 2707
282 Ga0495621_0022780 3300046539 Bacteria 2080
283 Ga0495656_0085391 3300046615 Bacteria 1433
284 Ga0495647_0015474 3300046681 Bacteria 2674
285 Ga0495658_0011538 3300046683 Bacteria 4448
286 Ga0495669_0054814 3300046684 Bacteria 1795
287 Ga0495613_0088217 3300046689 Bacteria 2248
288 Ga0495670_0202361 3300046691 Bacteria 1052
289 Ga0496110_0388832 3300048913 Bacteria 1271
290 nmdc:mga03683_29059_c1 3300050489 Bacteria 1686
291 nmdc:mga0yw44_421_c1 3300050492 Bacteria 14823
292 nmdc:mga05p37_1087_c1 3300050507 Bacteria 31201
293 nmdc:mga05p37_344_c1 3300050507 Bacteria 49898
294 nmdc:mga05p37_501126_c1 3300050507 Bacteria 1394
295 nmdc:mga05p37_524268_c1 3300050507 Bacteria 1354
296 nmdc:mga05p37_746471_c1 3300050507 Bacteria 1079
297 nmdc:mga09592_298132_c1 3300050508 Bacteria 1398
298 nmdc:mga09592_3822_c1 3300050508 Bacteria 12131
299 nmdc:mga09592_467_c1 3300050508 Bacteria 30217
300 nmdc:mga09592_5_c1 3300050508 Bacteria 130353
301 nmdc:mga0qj67_140418_c1 3300050509 Bacteria 1958
302 nmdc:mga0qj67_211067_c1 3300050509 Bacteria 1577
303 nmdc:mga0qj67_282295_c1 3300050509 Bacteria 1346
304 nmdc:mga06r32_106793_c1 3300050510 Bacteria 2751
305 nmdc:mga06r32_1256_c1 3300050510 Bacteria 22789
306 nmdc:mga06r32_152795_c1 3300050510 Bacteria 2288
307 nmdc:mga06r32_562759_c1 3300050510 Bacteria 1113
308 nmdc:mga06r32_62594_c1 3300050510 Bacteria 3585
309 nmdc:mga08y16_337061_c1 3300050511 Bacteria 1550
310 nmdc:mga08y16_378_c1 3300050511 Bacteria 40548
311 nmdc:mga08y16_4553_c1 3300050511 Bacteria 14453
312 nmdc:mga08y16_558680_c1 3300050511 Bacteria 1158
313 nmdc:mga08y16_74702_c1 3300050511 Bacteria 3533
314 nmdc:mga08y16_7973_c1 3300050511 Bacteria 11084
315 nmdc:mga08y16_81733_c1 3300050511 Bacteria 3368
316 nmdc:mga0n895_196615_c1 3300050512 Bacteria 2048
317 nmdc:mga0n895_260018_c1 3300050512 Bacteria 1762
318 nmdc:mga0n895_2657_c1 3300050512 Bacteria 14106
319 nmdc:mga0n895_67901_c1 3300050512 Bacteria 3531
320 nmdc:mga0rr50_463_c1 3300050513 Bacteria 21610
321 nmdc:mga08x19_162712_c1 3300050514 Bacteria 1516
322 nmdc:mga08x19_26610_c1 3300050514 Bacteria 3610
323 nmdc:mga08x19_3782_c1 3300050514 Bacteria 9005
324 nmdc:mga08x19_4276_c1 3300050514 Bacteria 8465
325 nmdc:mga0a205_134_c1 3300050515 Bacteria 46209
326 nmdc:mga0a205_185801_c1 3300050515 Bacteria 1971
327 nmdc:mga0a205_306999_c1 3300050515 Bacteria 1459
328 nmdc:mga08x19_41957_c1
329 Ga0070676_10040323
330 Ga0070676_10127573
331 Ga0070690_100000075
332 Ga0068869_100000841
333 Ga0070680_100001183
334 Ga0070680_100076147
335 Ga0070682_100027630
336 Ga0068868_100000329
337 Ga0070689_100000481
338 Ga0070691_10005075
339 Ga0070687_100000014
340 Ga0070687_100060931
341 Ga0070692_10000041
342 Ga0070692_10020565
343 Ga0070669_100000504
344 Ga0070669_100255714
345 Ga0070675_100017952
346 Ga0070675_100122747
347 Ga0070674_100006161
348 Ga0070674_100047236
349 Ga0070673_100152053
350 Ga0070673_100268905
351 Ga0070667_100188847
352 Ga0070714_100219527
353 Ga0070713_100068402
354 Ga0070701_10001151
355 Ga0070701_10086295
356 Ga0070705_100000289
357 Ga0070700_100000250
358 Ga0070700_100000885
359 Ga0070700_100195269
360 Ga0070694_100000099
361 Ga0070694_100324918
362 Ga0070678_100081259
363 Ga0070678_100101667
364 Ga0070678_100222471
365 Ga0068867_100000142
366 Ga0068867_100000174
367 Ga0068867_100046291
368 Ga0070698_100084218
369 Ga0070679_100036475
370 Ga0070672_100060538
371 Ga0070686_100000134
372 Ga0070695_100000018
373 Ga0070695_100083825
374 Ga0070696_100000310
375 Ga0070693_100000021
376 Ga0070665_100033080
377 Ga0070704_100000043
378 Ga0070704_100002864
379 Ga0070704_100061740
380 Ga0070704_100191298
381 Ga0068855_100003693
382 Ga0068854_100002225
383 Ga0068856_100140651
384 Ga0070702_100000007
385 Ga0070702_100013488
386 Ga0068852_100067142
387 Ga0068859_100001320
388 Ga0068859_100170739
389 Ga0068859_100217730
390 Ga0068864_100176034
391 Ga0068866_10000561
392 Ga0068861_100000318
393 Ga0068861_100000617
394 Ga0068870_10006544
395 Ga0068863_100273369
396 Ga0068858_100000334
397 Ga0068858_100426448
398 Ga0068860_100001410
399 Ga0068860_100125796
400 Ga0068862_100000688
401 Ga0068862_100000761
402 Ga0081455_10083512
403 Ga0081455_10134959
404 Ga0081540_1011598
405 Ga0081539_10000803
406 Ga0081539_10001448
407 Ga0081539_10036097
408 Ga0070717_10105875
409 Ga0070715_10027494
410 Ga0070715_10038558
411 Ga0070712_100129296
412 Ga0070712_100143598
413 Ga0097621_100000593
414 Ga0097621_100178144
415 Ga0068871_100000157
416 Ga0075428_100001267
417 Ga0075428_100222960
418 Ga0075428_100269563
419 Ga0075430_100280924
420 Ga0075431_100000947
421 Ga0075431_100046121
422 Ga0075431_100151605
423 Ga0075433_10001495
424 Ga0075433_10248587
425 Ga0075434_100000989
426 Ga0075434_100004412
427 Ga0075434_100117073
428 Ga0075434_100122573
429 Ga0075434_100225935
430 Ga0075434_100284727
431 Ga0075429_100000046
432 Ga0075429_100002241
433 Ga0075429_100040273
434 Ga0075429_100111788
435 Ga0068865_100000296
436 Ga0075436_100000190
437 Ga0075436_100006361
438 Ga0075436_100032584
439 Ga0075436_100063919
440 Ga0075436_100134527
441 Ga0097620_100001320
442 Ga0097620_100170745
443 Ga0097620_100217716
444 Ga0075435_100000058
445 Ga0075435_100034547
446 Ga0099794_10016238
447 Ga0099795_10094579
448 Ga0105240_10181745
449 Ga0111539_10005180
450 Ga0111539_10010601
451 Ga0111539_10017883
452 Ga0111539_10020580
453 Ga0111539_10080211
454 Ga0111539_10090468
455 Ga0111539_10219258
456 Ga0105245_10000405
457 Ga0105247_10114963
458 Ga0114129_10000177
459 Ga0114129_10012246
460 Ga0114129_10253336
461 Ga0114129_10276921
462 Ga0114129_10527542
463 Ga0105243_10000466
464 Ga0105243_10001571
465 Ga0105242_10000191
466 Ga0105242_10336464
467 Ga0105248_10157829
468 Ga0105248_10404762
469 Ga0105238_10052212
470 Ga0105249_10000555
471 Ga0105249_10312318
472 Ga0105239_10019995
473 Ga0105246_10266110
474 Ga0157378_10000196
475 Ga0157378_10316203
476 Ga0163162_10096393
477 Ga0163162_10483322
478 Ga0163162_10746474
479 Ga0157380_10000362
480 Ga0157380_10042163
481 Ga0182008_10016716
482 Ga0157376_10000314
483 Ga0213872_10026316
484 Ga0213876_10109220
485 Ga0224572_1003080
486 Ga0228598_1015984
487 Ga0209676_1001738
488 Ga0209050_1001259
489 Ga0207682_10005584
490 Ga0207642_10000935
491 Ga0207642_10114117
492 Ga0207647_10055506
493 Ga0207647_10163759
494 Ga0207685_10002270
495 Ga0207645_10005001
496 Ga0207643_10010088
497 Ga0207643_10110498
498 Ga0207654_10015875
499 Ga0207707_10104330
500 Ga0207693_10183701
501 Ga0207660_10000284
502 Ga0207660_10072174
503 Ga0207662_10000063
504 Ga0207662_10022529
505 Ga0207652_10025478
506 Ga0207646_10087596
507 Ga0207646_10203444
508 Ga0207681_10188001
509 Ga0207694_10234270
510 Ga0207659_10013498
511 Ga0207659_10179459
512 Ga0207687_10000976
513 Ga0207700_10072319
514 Ga0207700_10416781
515 Ga0207706_10017226
516 Ga0207686_10001089
517 Ga0207709_10002870
518 Ga0207709_10196652
519 Ga0207670_10001425
520 Ga0207670_10040980
521 Ga0207670_10191067
522 Ga0207669_10052163
523 Ga0207669_10054462
524 Ga0207704_10001148
525 Ga0207704_10068458
526 Ga0207665_10019703
527 Ga0207691_10006284
528 Ga0207711_10189683
529 Ga0207711_10444829
530 Ga0207689_10000214
531 Ga0207689_10026928
532 Ga0207689_10225631
533 Ga0207667_10118827
534 Ga0207712_10013116
535 Ga0207712_10015947
536 Ga0207712_10200743
537 Ga0207640_10000972
538 Ga0207677_10000714
539 Ga0207703_10019199
540 Ga0207639_10081158
541 Ga0207708_10000117
542 Ga0207708_10000446
543 Ga0207708_10205498
544 Ga0207702_10030059
545 Ga0207702_10103138
546 Ga0207641_10306864
547 Ga0207648_10000293
548 Ga0207648_10000982
549 Ga0207648_10073573
550 Ga0207648_10101084
551 Ga0207648_10325079
552 Ga0207676_10013697
553 Ga0207676_10118387
554 Ga0207675_100000218
555 Ga0207675_100000763
556 Ga0207683_10000979
557 Ga0207683_10035443
558 Ga0207698_10050156
559 Ga0207428_10000517
560 Ga0207428_10009830
561 Ga0207428_10027604
562 Ga0207428_10047213
563 Ga0207428_10080014
564 Ga0268266_10069316
565 Ga0268265_10000956
566 Ga0268265_10002587
567 Ga0268264_10000609
568 Ga0268264_10084407
569 Ga0265318_10009461
570 Ga0265330_10012862
571 Ga0265320_10016051
572 Ga0265325_10023499
573 Ga0265329_10004762
574 Ga0265339_10062068
575 Ga0265339_10062461
576 Ga0265331_10030286
577 Ga0265342_10049986
578 Ga0307416_100201861
579 Ga0373926_0024979
580 Ga0373944_0014363
581 Ga0373932_0031800
582 Ga0373936_0005642
583 Ga0373960_0046775
584 Ga0373943_0002249
585 Ga0373943_0007703
586 Ga0373946_0002273
587 Ga0373931_0117167
588 Ga0373935_0029109
589 Ga0373927_0010809
590 Ga0373947_0006407
591 Ga0373925_0010575
592 Ga0373925_0013238
593 Ga0373925_0018438
594 Ga0395898_0231743
595 Ga0395898_0480477
596 Ga0395901_0044772
597 Ga0395901_0314801
598 Ga0436365_1143517
599 Ga0436361_0420682
600 Ga0451576_0001387
601 Ga0451576_0122361
602 Ga0495603_0008792
603 Ga0495638_0108942
604 Ga0495582_0055039
605 Ga0495584_0042747
606 Ga0495642_0031875
607 Ga0495642_0033482
608 Ga0495586_0034781
609 Ga0495621_0022780
610 Ga0495656_0085391
611 Ga0495647_0015474
612 Ga0495658_0011538
613 Ga0495669_0054814
614 Ga0495613_0088217
615 Ga0495670_0202361
616 Ga0496110_0388832
617 nmdc:mga03683_29059_c1
618 nmdc:mga0yw44_421_c1
619 nmdc:mga05p37_1087_c1
620 nmdc:mga05p37_344_c1
621 nmdc:mga05p37_501126_c1
622 nmdc:mga05p37_524268_c1
623 nmdc:mga05p37_746471_c1
624 nmdc:mga09592_298132_c1
625 nmdc:mga09592_3822_c1
626 nmdc:mga09592_467_c1
627 nmdc:mga09592_5_c1
628 nmdc:mga0qj67_140418_c1
629 nmdc:mga0qj67_211067_c1
630 nmdc:mga0qj67_282295_c1
631 nmdc:mga06r32_106793_c1
632 nmdc:mga06r32_1256_c1
633 nmdc:mga06r32_152795_c1
634 nmdc:mga06r32_562759_c1
635 nmdc:mga06r32_62594_c1
636 nmdc:mga08y16_337061_c1
637 nmdc:mga08y16_378_c1
638 nmdc:mga08y16_4553_c1
639 nmdc:mga08y16_558680_c1
640 nmdc:mga08y16_74702_c1
641 nmdc:mga08y16_7973_c1
642 nmdc:mga08y16_81733_c1
643 nmdc:mga0n895_196615_c1
644 nmdc:mga0n895_260018_c1
645 nmdc:mga0n895_2657_c1
646 nmdc:mga0n895_67901_c1
647 nmdc:mga0rr50_463_c1
648 nmdc:mga08x19_162712_c1
649 nmdc:mga08x19_26610_c1
650 nmdc:mga08x19_3782_c1
651 nmdc:mga08x19_4276_c1
652 nmdc:mga0a205_134_c1
653 nmdc:mga0a205_185801_c1
654 nmdc:mga0a205_306999_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

96

372

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9668 27 324
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9583 28 326
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9576 26 324
6hke-assembly1.cif.gz_A matc (rpa3494) from rhodopseudomonas palustris with bound malate 0.9566 27 318
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.9552 27 327
ID Description Score Start End Superfamily
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9524 126 249 3.40.190.10
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9487 126 245 3.40.190.10
2dvzA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9481 127 245 3.40.190.10
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9377 126 249 3.40.190.10
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9342 126 249 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A4Q7NH98-F1-model_v4 Tripartite-type tricarboxylate transporter receptor subunit TctC 0.9801 27 326
AF-A0A537DML3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9772 35 326
AF-A0A7C2YTZ7-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9735 23 326
AF-A0A520EAY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9709 29 326
AF-A0A537DML3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9706 35 326

Map