F409003

General Info

Members Datasets Scaffolds Average Seq Length
327 203 655 413

Family's Representative Sequence

Representative Sequence 3300055283|Ga0500661_002811|Ga0500661_002811_840_2117
Length 425
Sequence MQKKINPKNMTTEKVDVLVIGAGPAGTVAASIIRQAGYTVKIVEKLKFPRFVIGESLLPRSMEALDEAGFIDAIKEKGFQEKFGAKFVKGDSVCDFTFKEQHTPGWNWTWQVTRADFDKTLADTVEKMGVPVSYETTVTAIRFNGADSVTTVEDLQGNKSEIAARFIVDGSGYGRVIPRLFNLEGNSNLQPRKALFAHTVDERRSMADEPNRITAVVHKPGVWIWIIPFSNGNTSVGFVGNPEFFASYPGTPEEQFRALLEEEPFTRERFRDVPMVFEPRVLESWSATTEKFYGDGFVLTGNVTEFLDPIFSSGVTLACVSAQTAAKLVIRKLKGETIDWEEEYMKPTMQGVNTFRSYVMAWYEGTLDKIFFAKNPNPAVKSQICSVLAGYVWDESNLYVKNHDTALKRLARTIELTEMILKPEE

Samples

Sample ID Description Type Environment
1 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
81 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
83 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
84 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
89 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
125 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
126 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
127 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
133 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
134 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
139 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
140 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
141 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
142 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
146 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
147 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
148 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
149 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
174 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
175 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
176 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
177 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
178 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
179 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
180 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
186 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
187 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
188 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
189 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
190 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
191 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
192 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
193 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
194 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
195 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
196 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
197 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
198 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
199 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
200 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
201 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
202 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
203 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.19
Metatranscriptomes 0
Isolates 5.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.23
Nodule 0
Rhizoplane 0.92
Rhizosphere 75.54
Stem 0
Stem Tuber 0
Unclassified 5.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500661_002811 3300055283 Bacteria 3281
2 SwRhRL2b_contig_1663676 2162886007 Bacteria 241831
3 JGI24740J21852_10004200 3300001979 Bacteria 6223
4 JGI24739J22299_10021136 3300001989 Bacteria 2319
5 JGI24737J22298_10000148 3300001990 Bacteria 21941
6 JGI24735J21928_10000020 3300002067 Bacteria 108706
7 JGI25154J39366_1000147 3300002738 Bacteria 55316
8 JGI25157J39369_1003291 3300002741 Bacteria 3373
9 JGI25153J46596_10000327 3300003215 Bacteria 34410
10 rootH1_10052545 3300003316 Bacteria 8727
11 rootH2_10001223 3300003320 Bacteria 131149
12 rootL2_10021639 3300003322 Bacteria 6506
13 rootL2_10029184 3300003322 Bacteria 10464
14 rootL2_10069142 3300003322 Bacteria 8171
15 rootL2_10136627 3300003322 Bacteria 6053
16 rootL2_10299383 3300003322 Bacteria 2227
17 rootH1_10096223 3300003316 Bacteria 1606
18 rootH1_10096223 3300003323 Bacteria 1926
19 rootH1_10138116 3300003323 Bacteria 1792
20 rootH1_10154878 3300003323 Bacteria 9017
21 JGI25160J50197_1001486 3300003354 Bacteria 11659
22 JGI25160J50197_1017224 3300003354 Bacteria 2298
23 Ga0055528_1000329 3300003790 Bacteria 39909
24 Ga0055530_10001769 3300003791 Bacteria 15071
25 Ga0055531_10000728 3300003794 Bacteria 27843
26 Ga0065165_1000102 3300005262 Bacteria 140917
27 Ga0065165_1019803 3300005262 Bacteria 2390
28 Ga0065714_10078432 3300005288 Bacteria 2598
29 Ga0065704_10070136 3300005289 Bacteria 560402
30 Ga0070676_10035247 3300005328 Bacteria 2877
31 Ga0070676_10055175 3300005328 Bacteria 2344
32 Ga0070676_10122341 3300005328 Bacteria 1635
33 Ga0070683_100061887 3300005329 Bacteria 3479
34 Ga0070670_100039230 3300005331 Bacteria 4072
35 Ga0068869_100019921 3300005334 Bacteria 4593
36 Ga0070666_10000078 3300005335 Bacteria 69922
37 Ga0070680_100000816 3300005336 Bacteria 21964
38 Ga0070680_100277637 3300005336 Unclassified 1419
39 Ga0070682_100001035 3300005337 Bacteria 16081
40 Ga0070682_100096210 3300005337 Bacteria 1946
41 Ga0068868_100008072 3300005338 Bacteria 7529
42 Ga0068868_100026758 3300005338 Bacteria 4398
43 Ga0070691_10001695 3300005341 Bacteria 9560
44 Ga0070668_100040675 3300005347 Unclassified 3557
45 Ga0070671_100033582 3300005355 Bacteria 4245
46 Ga0070673_100002206 3300005364 Bacteria 11773
47 Ga0070673_100025454 3300005364 Bacteria 4356
48 Ga0070688_100087109 3300005365 Bacteria 2033
49 Ga0070667_100008477 3300005367 Bacteria 8520
50 Ga0070667_100011803 3300005367 Bacteria 7222
51 Ga0070667_100163056 3300005367 Bacteria 1964
52 Ga0070678_100021277 3300005456 Bacteria 4274
53 Ga0070678_100041186 3300005456 Bacteria 3273
54 Ga0070681_10028438 3300005458 Bacteria 5620
55 Ga0068867_100226471 3300005459 Unclassified 1509
56 Ga0070679_100090432 3300005530 Unclassified 3049
57 Ga0068853_100007787 3300005539 Bacteria 8592
58 Ga0068853_100281266 3300005539 Bacteria 1534
59 Ga0070672_100083319 3300005543 Unclassified 2566
60 Ga0070672_100122028 3300005543 Bacteria 2134
61 Ga0070665_100009726 3300005548 Bacteria 9721
62 Ga0068855_100053689 3300005563 Bacteria 4740
63 Ga0068856_100003542 3300005614 Bacteria 15720
64 Ga0068852_100000614 3300005616 Bacteria 23382
65 Ga0068852_100002267 3300005616 Bacteria 13207
66 Ga0068859_100000003 3300005617 Bacteria 479218
67 Ga0068859_100006344 3300005617 Bacteria 11998
68 Ga0068864_100003917 3300005618 Bacteria 12262
69 Ga0068864_100187355 3300005618 Bacteria 1895
70 Ga0068851_10004169 3300005834 Bacteria 6509
71 Ga0068851_10005548 3300005834 Bacteria 5719
72 Ga0068863_100061238 3300005841 Bacteria 3558
73 Ga0068863_100304939 3300005841 Bacteria 1545
74 Ga0068858_100002816 3300005842 Bacteria 17485
75 Ga0068860_100002009 3300005843 Bacteria 21464
76 Ga0068860_100007756 3300005843 Bacteria 10722
77 Ga0068860_100085306 3300005843 Bacteria 3005
78 Ga0075366_10000091 3300006195 Bacteria 36066
79 Ga0075366_10030728 3300006195 Unclassified 3159
80 Ga0097621_100000777 3300006237 Bacteria 22354
81 Ga0097621_100001974 3300006237 Bacteria 13971
82 Ga0097621_100003348 3300006237 Bacteria 11025
83 Ga0097621_100246299 3300006237 Bacteria 1564
84 Ga0068871_100000154 3300006358 Bacteria 45466
85 Ga0068871_100031393 3300006358 Bacteria 4190
86 Ga0068865_100000172 3300006881 Bacteria 35866
87 Ga0097620_100000003 3300006931 Bacteria 479218
88 Ga0097620_100006344 3300006931 Bacteria 11998
89 Ga0105240_10000011 3300009093 Bacteria 523646
90 Ga0105240_10004282 3300009093 Bacteria 21802
91 Ga0105247_10020953 3300009101 Bacteria 3933
92 Ga0105243_10029974 3300009148 Bacteria 4187
93 Ga0105241_10000847 3300009174 Bacteria 23164
94 Ga0105241_10007812 3300009174 Bacteria 7865
95 Ga0105242_10010888 3300009176 Bacteria 6985
96 Ga0105242_10035683 3300009176 Bacteria 3987
97 Ga0105242_10221668 3300009176 Unclassified 1690
98 Ga0105237_10001395 3300009545 Bacteria 31908
99 Ga0105237_10003457 3300009545 Bacteria 18748
100 Ga0105237_10004605 3300009545 Bacteria 15900
101 Ga0105238_10089944 3300009551 Bacteria 3057
102 Ga0105249_10013424 3300009553 Bacteria 7233
103 Ga0105249_10078345 3300009553 Bacteria 3066
104 Ga0105239_10000122 3300010375 Bacteria 109167
105 Ga0105239_10022481 3300010375 Bacteria 6952
106 Ga0105239_10048295 3300010375 Bacteria 4667
107 Ga0105239_10071322 3300010375 Bacteria 3817
108 Ga0105239_10116757 3300010375 Unclassified 2961
109 Ga0105246_10022241 3300011119 Bacteria 4090
110 Ga0157371_10130488 3300013102 Bacteria 1788
111 Ga0157371_10143390 3300013102 Bacteria 1702
112 Ga0157370_10008820 3300013104 Bacteria 10837
113 Ga0157370_10189327 3300013104 Bacteria 1910
114 Ga0157370_10197290 3300013104 Bacteria 1868
115 Ga0157369_10121597 3300013105 Bacteria 2770
116 Ga0157369_10246055 3300013105 Bacteria 1867
117 Ga0157374_10000849 3300013296 Bacteria 26704
118 Ga0157374_10112864 3300013296 Bacteria 2616
119 Ga0157378_10007598 3300013297 Bacteria 9463
120 Ga0157378_10052823 3300013297 Unclassified 3616
121 Ga0157378_10129333 3300013297 Bacteria 2336
122 Ga0157378_10143128 3300013297 Unclassified 2222
123 Ga0157378_10194967 3300013297 Bacteria 1913
124 Ga0163162_10000361 3300013306 Bacteria 41263
125 Ga0163162_10016575 3300013306 Bacteria 7202
126 Ga0163162_10020197 3300013306 Bacteria 6542
127 Ga0163162_10056816 3300013306 Bacteria 3941
128 Ga0163162_10094805 3300013306 Bacteria 3071
129 Ga0163162_10095299 3300013306 Bacteria 3063
130 Ga0163162_10128606 3300013306 Bacteria 2641
131 Ga0157372_10001279 3300013307 Bacteria 27221
132 Ga0157372_10027329 3300013307 Bacteria 6213
133 Ga0157372_10042057 3300013307 Bacteria 5052
134 Ga0157375_10031511 3300013308 Bacteria 5014
135 Ga0157375_10049792 3300013308 Bacteria 4107
136 Ga0157375_10054895 3300013308 Bacteria 3926
137 Ga0157375_10062269 3300013308 Bacteria 3707
138 Ga0157375_10112327 3300013308 Bacteria 2825
139 Ga0157375_10200918 3300013308 Bacteria 2149
140 Ga0163163_10079254 3300014325 Bacteria 3283
141 Ga0157380_10029014 3300014326 Bacteria 4226
142 Ga0157379_10031856 3300014968 Bacteria 4697
143 Ga0157379_10170977 3300014968 Bacteria 1962
144 Ga0157379_10177262 3300014968 Bacteria 1925
145 Ga0157376_10015140 3300014969 Bacteria 5815
146 Ga0157376_10021345 3300014969 Bacteria 5028
147 Ga0157376_10082120 3300014969 Bacteria 2768
148 Ga0157376_10083760 3300014969 Bacteria 2744
149 Ga0157376_10101063 3300014969 Bacteria 2519
150 Ga0182005_1000171 3300015265 Bacteria 44781
151 Ga0163161_10124863 3300017792 Bacteria 1937
152 Ga0209436_100701 3300025208 Bacteria 14045
153 Ga0209258_100151 3300025242 Bacteria 160444
154 Ga0209646_1000002 3300025246 Bacteria 1425781
155 Ga0209026_1000226 3300025250 Bacteria 77076
156 Ga0209026_1000260 3300025250 Bacteria 65544
157 Ga0209148_1000154 3300025254 Bacteria 145214
158 Ga0209673_1000208 3300025273 Bacteria 117755
159 Ga0209130_1000665 3300025284 Bacteria 31274
160 Ga0209564_1014236 3300025295 Bacteria 3322
161 Ga0209758_1000944 3300025297 Bacteria 39134
162 Ga0209758_1009988 3300025297 Bacteria 5771
163 Ga0209050_1000134 3300025298 Bacteria 184417
164 Ga0207426_1000051 3300025302 Bacteria 391700
165 Ga0207426_1001309 3300025302 Bacteria 21282
166 Ga0207426_1001719 3300025302 Bacteria 16780
167 Ga0207426_1012652 3300025302 Bacteria 3163
168 Ga0207426_1017127 3300025302 Bacteria 2582
169 Ga0209257_1000001 3300025304 Bacteria 2274655
170 Ga0209257_1002223 3300025304 Bacteria 19958
171 Ga0207656_10002467 3300025321 Bacteria 6240
172 Ga0207656_10006415 3300025321 Unclassified 4226
173 Ga0207710_10014377 3300025900 Bacteria 3337
174 Ga0207680_10000102 3300025903 Bacteria 39308
175 Ga0207647_10000347 3300025904 Bacteria 37523
176 Ga0207647_10041288 3300025904 Bacteria 2902
177 Ga0207645_10000146 3300025907 Bacteria 55323
178 Ga0207645_10070617 3300025907 Bacteria 2234
179 Ga0207705_10100699 3300025909 Bacteria 2125
180 Ga0207654_10001144 3300025911 Bacteria 14294
181 Ga0207654_10013034 3300025911 Bacteria 4269
182 Ga0207654_10013325 3300025911 Bacteria 4230
183 Ga0207707_10000794 3300025912 Bacteria 30945
184 Ga0207695_10000010 3300025913 Bacteria 981919
185 Ga0207695_10009940 3300025913 Bacteria 11693
186 Ga0207695_10072436 3300025913 Bacteria 3515
187 Ga0207671_10000067 3300025914 Bacteria 162184
188 Ga0207671_10023055 3300025914 Bacteria 4698
189 Ga0207671_10028357 3300025914 Bacteria 4183
190 Ga0207660_10001087 3300025917 Bacteria 18120
191 Ga0207652_10001622 3300025921 Bacteria 19775
192 Ga0207644_10025052 3300025931 Bacteria 4099
193 Ga0207644_10082913 3300025931 Unclassified 2373
194 Ga0207644_10251900 3300025931 Bacteria 1409
195 Ga0207706_10077671 3300025933 Bacteria 2920
196 Ga0207704_10000205 3300025938 Bacteria 30268
197 Ga0207691_10054520 3300025940 Bacteria 3646
198 Ga0207691_10060699 3300025940 Unclassified 3436
199 Ga0207689_10000897 3300025942 Bacteria 28597
200 Ga0207689_10003994 3300025942 Bacteria 13420
201 Ga0207667_10342938 3300025949 Unclassified 1524
202 Ga0207651_10089092 3300025960 Bacteria 2251
203 Ga0207712_10001952 3300025961 Bacteria 13536
204 Ga0207712_10132864 3300025961 Bacteria 1899
205 Ga0207668_10142150 3300025972 Unclassified 1847
206 Ga0207658_10011250 3300025986 Bacteria 6098
207 Ga0207658_10014360 3300025986 Bacteria 5424
208 Ga0207677_10030386 3300026023 Bacteria 3447
209 Ga0207703_10004081 3300026035 Bacteria 12045
210 Ga0207639_10028111 3300026041 Bacteria 4103
211 Ga0207639_10046374 3300026041 Bacteria 3279
212 Ga0207639_10212693 3300026041 Unclassified 1665
213 Ga0207641_10000015 3300026088 Bacteria 321332
214 Ga0207641_10070035 3300026088 Unclassified 3013
215 Ga0207641_10269335 3300026088 Unclassified 1598
216 Ga0207648_10000747 3300026089 Bacteria 36518
217 Ga0207648_10026672 3300026089 Bacteria 5131
218 Ga0207648_10312084 3300026089 Bacteria 1412
219 Ga0207676_10144864 3300026095 Unclassified 2039
220 Ga0207683_10053553 3300026121 Bacteria 3538
221 Ga0207698_10006308 3300026142 Bacteria 7380
222 Ga0207698_10013734 3300026142 Bacteria 5356
223 Ga0268266_10001424 3300028379 Bacteria 28538
224 Ga0268266_10014536 3300028379 Bacteria 6767
225 Ga0268264_10000614 3300028381 Bacteria 42551
226 Ga0268264_10001199 3300028381 Bacteria 25035
227 Ga0268264_10003263 3300028381 Bacteria 14030
228 Ga0307515_10000001 3300028794 Bacteria 4259510
229 Ga0307515_10000031 3300028794 Bacteria 358648
230 Ga0307515_10000667 3300028794 Bacteria 79135
231 Ga0307515_10000790 3300028794 Bacteria 72891
232 Ga0307511_10001046 3300030521 Bacteria 29433
233 Ga0265327_10000089 3300031251 Bacteria 197227
234 Ga0265327_10000351 3300031251 Bacteria 87732
235 Ga0265327_10019154 3300031251 Bacteria 4218
236 Ga0307509_10007047 3300031507 Bacteria 14864
237 Ga0307509_10102070 3300031507 Bacteria 2901
238 Ga0307414_10018525 3300032004 Bacteria 4290
239 Ga0307507_10000144 3300033179 Bacteria 123842
240 Ga0395905_0000003 3300037471 Bacteria 1347396
241 Ga0395905_0000051 3300037471 Bacteria 223416
242 Ga0395905_0000612 3300037471 Bacteria 47853
243 Ga0395905_0360759 3300037471 Bacteria 1346
244 Ga0395901_0003386 3300038443 Bacteria 16061
245 Ga0451793_1871521 3300041452 Bacteria 1429
246 Ga0439431_0005359 3300041997 Bacteria 2832
247 Ga0466965_0051865 3300044683 Bacteria 2036
248 Ga0466970_0023401 3300044765 Bacteria 3226
249 Ga0466957_0044030 3300044842 Bacteria 2705
250 Ga0466959_0077929 3300045049 Bacteria 2391
251 Ga0495627_019690 3300046453 Bacteria 2258
252 Ga0495650_0000095 3300046471 Bacteria 218020
253 Ga0495605_0040570 3300046474 Bacteria 2323
254 Ga0495585_0000057 3300046492 Bacteria 113069
255 Ga0495585_0002733 3300046492 Bacteria 12319
256 Ga0495583_0005597 3300046506 Bacteria 8469
257 Ga0495606_0000009 3300046507 Bacteria 306313
258 Ga0495606_0048990 3300046507 Bacteria 2774
259 Ga0495610_0001711 3300046512 Bacteria 19236
260 Ga0495616_0000733 3300046513 Bacteria 24135
261 Ga0495637_0032473 3300046520 Bacteria 2299
262 Ga0495648_0003800 3300046524 Bacteria 13122
263 Ga0495598_0016617 3300046537 Bacteria 1882
264 Ga0495609_0015705 3300046538 Bacteria 3540
265 Ga0495633_0000080 3300046558 Bacteria 127703
266 Ga0495633_0000275 3300046558 Bacteria 60032
267 Ga0495633_0006714 3300046558 Bacteria 6773
268 Ga0495668_0000017 3300046616 Bacteria 434025
269 Ga0495668_0000451 3300046616 Bacteria 52539
270 Ga0495625_0000007 3300046660 Bacteria 565749
271 Ga0495625_0000435 3300046660 Bacteria 62758
272 Ga0495625_0001213 3300046660 Bacteria 32692
273 Ga0495625_0040215 3300046660 Bacteria 3412
274 Ga0495661_0000576 3300046665 Bacteria 38166
275 Ga0495649_0000007 3300046694 Bacteria 518037
276 Ga0495589_0089949 3300046794 Bacteria 1491
277 Ga0495660_0031073 3300046810 Bacteria 3004
278 Ga0495674_0030359 3300047319 Bacteria 4916
279 Ga0495687_000440 3300047443 Bacteria 51285
280 Ga0495687_006275 3300047443 Bacteria 7332
281 Ga0495686_0000256 3300047472 Bacteria 95552
282 Ga0495686_0018964 3300047472 Bacteria 4604
283 Ga0495614_0019128 3300048089 Bacteria 2964
284 Ga0496114_0003567 3300048917 Bacteria 11953
285 Ga0496121_0000020 3300048924 Bacteria 498732
286 Ga0496126_0004575 3300048929 Bacteria 16416
287 Ga0501034_0000002 3300049571 Bacteria 565510
288 Ga0501034_0413130 3300049571 Bacteria 1271
289 Ga0501047_0169706 3300049581 Bacteria 2051
290 Ga0501070_0046815 3300049586 Bacteria 3596
291 Ga0501071_0089347 3300049587 Bacteria 2261
292 Ga0501083_0061245 3300049744 Bacteria 2512
293 Ga0501035_0221390 3300049822 Bacteria 1616
294 Ga0501044_0045355 3300049823 Bacteria 4555
295 nmdc:mga0k408_490_c1 3300050493 Bacteria 21695
296 Ga0500644_0000066 3300053088 Bacteria 61993
297 Ga0500646_0011508 3300053090 Bacteria 2277
298 Ga0500583_0000075 3300053092 Bacteria 59561
299 Ga0500583_0001067 3300053092 Bacteria 7837
300 Ga0500651_0092601 3300053093 Bacteria 1859
301 Ga0500594_0004953 3300053118 Bacteria 2946
302 Ga0500618_000033 3300053125 Bacteria 121886
303 Ga0500658_0010663 3300053134 Bacteria 3390
304 Ga0500577_0000053 3300053142 Bacteria 25530
305 Ga0500589_017331 3300053147 Bacteria 3246
306 Ga0500622_0000787 3300053156 Bacteria 27523
307 Ga0500636_0047588 3300053177 Bacteria 2526
308 Ga0501084_0146710 3300054114 Bacteria 1987
309 Ga0501082_0067426 3300060353 Bacteria 3081
310 2599481246 2599185184 Bacteria 6430550
311 2819573668 2818991442 Bacteria 8318214
312 2819680830 2818991460 Bacteria 7595395
313 2821137001 2821136567 Bacteria 8080116
314 2881955562 2881955468 Bacteria 3545609
315 2883072625 2883068021 Bacteria 6192739
316 2884795587 2884791551 Bacteria 8511252
317 2896087791 2896085136 Bacteria 6129793
318 2896112503 2896109856 Bacteria 7140722
319 2904468257 2904467357 Bacteria 8057758
320 2928081843 2928078545 Bacteria 6534839
321 2928151866 2928147474 Bacteria 6512076
322 2929178841 2929177148 Bacteria 7883697
323 2929241282 2929239360 Bacteria 7745570
324 2929923288 2929921140 Bacteria 8649150
325 2932087173 2932082852 Bacteria 6563563
326 2945981245 2945977869 Bacteria 7777518
327 2946019354 2946013367 Bacteria 7766675
328 8003152159 8003151029 Bacteria 8187759
329 Ga0500661_002811
330 SwRhRL2b_contig_1663676
331 JGI24740J21852_10004200
332 JGI24739J22299_10021136
333 JGI24737J22298_10000148
334 JGI24735J21928_10000020
335 JGI25154J39366_1000147
336 JGI25157J39369_1003291
337 JGI25153J46596_10000327
338 rootH1_10052545
339 rootH2_10001223
340 rootL2_10021639
341 rootL2_10029184
342 rootL2_10069142
343 rootL2_10136627
344 rootL2_10299383
345 rootH1_10096223
346 rootH1_10138116
347 rootH1_10154878
348 JGI25160J50197_1001486
349 JGI25160J50197_1017224
350 Ga0055528_1000329
351 Ga0055530_10001769
352 Ga0055531_10000728
353 Ga0065165_1000102
354 Ga0065165_1019803
355 Ga0065714_10078432
356 Ga0065704_10070136
357 Ga0070676_10035247
358 Ga0070676_10055175
359 Ga0070676_10122341
360 Ga0070683_100061887
361 Ga0070670_100039230
362 Ga0068869_100019921
363 Ga0070666_10000078
364 Ga0070680_100000816
365 Ga0070680_100277637
366 Ga0070682_100001035
367 Ga0070682_100096210
368 Ga0068868_100008072
369 Ga0068868_100026758
370 Ga0070691_10001695
371 Ga0070668_100040675
372 Ga0070671_100033582
373 Ga0070673_100002206
374 Ga0070673_100025454
375 Ga0070688_100087109
376 Ga0070667_100008477
377 Ga0070667_100011803
378 Ga0070667_100163056
379 Ga0070678_100021277
380 Ga0070678_100041186
381 Ga0070681_10028438
382 Ga0068867_100226471
383 Ga0070679_100090432
384 Ga0068853_100007787
385 Ga0068853_100281266
386 Ga0070672_100083319
387 Ga0070672_100122028
388 Ga0070665_100009726
389 Ga0068855_100053689
390 Ga0068856_100003542
391 Ga0068852_100000614
392 Ga0068852_100002267
393 Ga0068859_100000003
394 Ga0068859_100006344
395 Ga0068864_100003917
396 Ga0068864_100187355
397 Ga0068851_10004169
398 Ga0068851_10005548
399 Ga0068863_100061238
400 Ga0068863_100304939
401 Ga0068858_100002816
402 Ga0068860_100002009
403 Ga0068860_100007756
404 Ga0068860_100085306
405 Ga0075366_10000091
406 Ga0075366_10030728
407 Ga0097621_100000777
408 Ga0097621_100001974
409 Ga0097621_100003348
410 Ga0097621_100246299
411 Ga0068871_100000154
412 Ga0068871_100031393
413 Ga0068865_100000172
414 Ga0097620_100000003
415 Ga0097620_100006344
416 Ga0105240_10000011
417 Ga0105240_10004282
418 Ga0105247_10020953
419 Ga0105243_10029974
420 Ga0105241_10000847
421 Ga0105241_10007812
422 Ga0105242_10010888
423 Ga0105242_10035683
424 Ga0105242_10221668
425 Ga0105237_10001395
426 Ga0105237_10003457
427 Ga0105237_10004605
428 Ga0105238_10089944
429 Ga0105249_10013424
430 Ga0105249_10078345
431 Ga0105239_10000122
432 Ga0105239_10022481
433 Ga0105239_10048295
434 Ga0105239_10071322
435 Ga0105239_10116757
436 Ga0105246_10022241
437 Ga0157371_10130488
438 Ga0157371_10143390
439 Ga0157370_10008820
440 Ga0157370_10189327
441 Ga0157370_10197290
442 Ga0157369_10121597
443 Ga0157369_10246055
444 Ga0157374_10000849
445 Ga0157374_10112864
446 Ga0157378_10007598
447 Ga0157378_10052823
448 Ga0157378_10129333
449 Ga0157378_10143128
450 Ga0157378_10194967
451 Ga0163162_10000361
452 Ga0163162_10016575
453 Ga0163162_10020197
454 Ga0163162_10056816
455 Ga0163162_10094805
456 Ga0163162_10095299
457 Ga0163162_10128606
458 Ga0157372_10001279
459 Ga0157372_10027329
460 Ga0157372_10042057
461 Ga0157375_10031511
462 Ga0157375_10049792
463 Ga0157375_10054895
464 Ga0157375_10062269
465 Ga0157375_10112327
466 Ga0157375_10200918
467 Ga0163163_10079254
468 Ga0157380_10029014
469 Ga0157379_10031856
470 Ga0157379_10170977
471 Ga0157379_10177262
472 Ga0157376_10015140
473 Ga0157376_10021345
474 Ga0157376_10082120
475 Ga0157376_10083760
476 Ga0157376_10101063
477 Ga0182005_1000171
478 Ga0163161_10124863
479 Ga0209436_100701
480 Ga0209258_100151
481 Ga0209646_1000002
482 Ga0209026_1000226
483 Ga0209026_1000260
484 Ga0209148_1000154
485 Ga0209673_1000208
486 Ga0209130_1000665
487 Ga0209564_1014236
488 Ga0209758_1000944
489 Ga0209758_1009988
490 Ga0209050_1000134
491 Ga0207426_1000051
492 Ga0207426_1001309
493 Ga0207426_1001719
494 Ga0207426_1012652
495 Ga0207426_1017127
496 Ga0209257_1000001
497 Ga0209257_1002223
498 Ga0207656_10002467
499 Ga0207656_10006415
500 Ga0207710_10014377
501 Ga0207680_10000102
502 Ga0207647_10000347
503 Ga0207647_10041288
504 Ga0207645_10000146
505 Ga0207645_10070617
506 Ga0207705_10100699
507 Ga0207654_10001144
508 Ga0207654_10013034
509 Ga0207654_10013325
510 Ga0207707_10000794
511 Ga0207695_10000010
512 Ga0207695_10009940
513 Ga0207695_10072436
514 Ga0207671_10000067
515 Ga0207671_10023055
516 Ga0207671_10028357
517 Ga0207660_10001087
518 Ga0207652_10001622
519 Ga0207644_10025052
520 Ga0207644_10082913
521 Ga0207644_10251900
522 Ga0207706_10077671
523 Ga0207704_10000205
524 Ga0207691_10054520
525 Ga0207691_10060699
526 Ga0207689_10000897
527 Ga0207689_10003994
528 Ga0207667_10342938
529 Ga0207651_10089092
530 Ga0207712_10001952
531 Ga0207712_10132864
532 Ga0207668_10142150
533 Ga0207658_10011250
534 Ga0207658_10014360
535 Ga0207677_10030386
536 Ga0207703_10004081
537 Ga0207639_10028111
538 Ga0207639_10046374
539 Ga0207639_10212693
540 Ga0207641_10000015
541 Ga0207641_10070035
542 Ga0207641_10269335
543 Ga0207648_10000747
544 Ga0207648_10026672
545 Ga0207648_10312084
546 Ga0207676_10144864
547 Ga0207683_10053553
548 Ga0207698_10006308
549 Ga0207698_10013734
550 Ga0268266_10001424
551 Ga0268266_10014536
552 Ga0268264_10000614
553 Ga0268264_10001199
554 Ga0268264_10003263
555 Ga0307515_10000001
556 Ga0307515_10000031
557 Ga0307515_10000667
558 Ga0307515_10000790
559 Ga0307511_10001046
560 Ga0265327_10000089
561 Ga0265327_10000351
562 Ga0265327_10019154
563 Ga0307509_10007047
564 Ga0307509_10102070
565 Ga0307414_10018525
566 Ga0307507_10000144
567 Ga0395905_0000003
568 Ga0395905_0000051
569 Ga0395905_0000612
570 Ga0395905_0360759
571 Ga0395901_0003386
572 Ga0451793_1871521
573 Ga0439431_0005359
574 Ga0466965_0051865
575 Ga0466970_0023401
576 Ga0466957_0044030
577 Ga0466959_0077929
578 Ga0495627_019690
579 Ga0495650_0000095
580 Ga0495605_0040570
581 Ga0495585_0000057
582 Ga0495585_0002733
583 Ga0495583_0005597
584 Ga0495606_0000009
585 Ga0495606_0048990
586 Ga0495610_0001711
587 Ga0495616_0000733
588 Ga0495637_0032473
589 Ga0495648_0003800
590 Ga0495598_0016617
591 Ga0495609_0015705
592 Ga0495633_0000080
593 Ga0495633_0000275
594 Ga0495633_0006714
595 Ga0495668_0000017
596 Ga0495668_0000451
597 Ga0495625_0000007
598 Ga0495625_0000435
599 Ga0495625_0001213
600 Ga0495625_0040215
601 Ga0495661_0000576
602 Ga0495649_0000007
603 Ga0495589_0089949
604 Ga0495660_0031073
605 Ga0495674_0030359
606 Ga0495687_000440
607 Ga0495687_006275
608 Ga0495686_0000256
609 Ga0495686_0018964
610 Ga0495614_0019128
611 Ga0496114_0003567
612 Ga0496121_0000020
613 Ga0496126_0004575
614 Ga0501034_0000002
615 Ga0501034_0413130
616 Ga0501047_0169706
617 Ga0501070_0046815
618 Ga0501071_0089347
619 Ga0501083_0061245
620 Ga0501035_0221390
621 Ga0501044_0045355
622 nmdc:mga0k408_490_c1
623 Ga0500644_0000066
624 Ga0500646_0011508
625 Ga0500583_0000075
626 Ga0500583_0001067
627 Ga0500651_0092601
628 Ga0500594_0004953
629 Ga0500618_000033
630 Ga0500658_0010663
631 Ga0500577_0000053
632 Ga0500589_017331
633 Ga0500622_0000787
634 Ga0500636_0047588
635 Ga0501084_0146710
636 Ga0501082_0067426
637 2599481246
638 2819573668
639 2819680830
640 2821137001
641 2881955562
642 2883072625
643 2884795587
644 2896087791
645 2896112503
646 2904468257
647 2928081843
648 2928151866
649 2929178841
650 2929241282
651 2929923288
652 2932087173
653 2945981245
654 2946019354
655 8003152159

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04820

Trp_halogenase

Tryptophan halogenase

16

102

0.92

PF12831

FAD_oxidored

FAD dependent oxidoreductase

16

180

0.82

PF04820

Trp_halogenase

Tryptophan halogenase

92

391

0.75

PF01494

FAD_binding_3

FAD binding domain

14

340

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nix-assembly3.cif.gz_C crystal structure of flavoprotein/dehydrogenase from cytophaga hutchinsonii. northeast structural genomics consortium target chr43. 0.9777 5 411
3nix-assembly2.cif.gz_B crystal structure of flavoprotein/dehydrogenase from cytophaga hutchinsonii. northeast structural genomics consortium target chr43. 0.975 8 410
3nix-assembly3.cif.gz_C crystal structure of flavoprotein/dehydrogenase from cytophaga hutchinsonii. northeast structural genomics consortium target chr43. 0.973 5 411
3nix-assembly2.cif.gz_B crystal structure of flavoprotein/dehydrogenase from cytophaga hutchinsonii. northeast structural genomics consortium target chr43. 0.9703 8 410
7cb2-assembly1.cif.gz_A the 6-phosphogluconate dehydrogenase (nadp-bound) from staphylococcus aureus 0.9356 6 37
ID Description Score Start End Superfamily
3nixB00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9735 8 409 3.50.50.60
3nixB00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9686 8 409 3.50.50.60
af_Q2FZ66_80_363_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.942 128 154 3.20.20.70
4oqyB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9392 8 35 3.40.50.720
af_Q24050_1_182_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.934 206 231 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A519STK8-F1-model_v4 FAD-dependent oxidoreductase 0.9765 55 355 GO:0004497
AF-A0A521HDK2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9744 2 412 GO:0016491
GO:0071949
AF-A0A2G5L807-F1-model_v4 FAD-binding domain-containing protein 0.9733 7 413 GO:0016491
GO:0071949
AF-A0A519STK8-F1-model_v4 FAD-dependent oxidoreductase 0.9701 55 355 GO:0004497
AF-A0A521HDK2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9697 2 412 GO:0016491
GO:0071949

Map