F409112

General Info

Members Datasets Scaffolds Average Seq Length
328 251 296 425

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100016504|Ga0070659_1000165042
Length 492
Sequence MGSCGPQAHNLRKRPNVSFSLSAEKSYRLMSRGVKSIFWPSPAKVPALFGRSMRPAFNSNTQDEESNMVEISHPRAEFTARYFVESSVPISKAAEVIAGEQSSGTFLALPGETDALKNRARARVVKVDSHPPVLEPSLRSAHVERKGPPSVYYRGEIEIAFPVDNIGPNLPTLLSTVAGNLFELGEVTGLRLLDVDLPPAYAAQFPGPQFGIGGTRDFAKVYGRPMIGTIIKPSIGLLPEQTAEIVDSLCAADIDFIKDDELLADPTYASFDERLAAVMPVLHRHADRMGRMPMYAINISGTIDEMLHRHDAVLRAGGTCVMVCINWVGFAGVEHLRKHAQLPIHGHRNGWGAFTRCPQLGFSFKAFQKLWRLAGVDHLHVNGIRSKFWEPDTSVIESARSCLAPFAGVQPLMPVFSSGQWAAQAPDLYAQLGSVDLMHLAGGGIIGHPQGIAAGVASMREGWEAAIEGVGLETFAESRPALRAALSHFQSA

Samples

Sample ID Description Type Environment
1 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
2 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
3 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
4 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
5 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
6 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
7 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
8 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
9 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
10 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
11 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
12 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
13 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
14 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
15 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
16 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
17 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
18 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
19 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
20 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
21 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
22 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
23 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
24 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
25 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
26 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
27 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
28 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
29 2904456579 Variovorax sp. 2002 Isolate Unclassified
30 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
31 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
32 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
33 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
34 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
35 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
36 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
37 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
38 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
39 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
42 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
43 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
44 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
47 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
48 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
49 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
50 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
51 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
52 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
53 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
54 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
55 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
56 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
57 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
58 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
59 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
60 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
61 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
62 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
63 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
66 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
67 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
68 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
69 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
70 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
71 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
74 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
86 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
95 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
96 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
97 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
98 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
99 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
102 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
105 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
142 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
143 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
144 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
145 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
146 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
147 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
148 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
149 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
150 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
151 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
152 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
153 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
154 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
155 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
156 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
157 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
158 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
159 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
160 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
161 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
162 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
163 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
164 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
165 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
166 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
167 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
168 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
169 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
170 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
171 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
172 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
173 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
174 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
175 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
176 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
177 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
178 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
179 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
180 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
181 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
182 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
183 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
184 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
185 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
186 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
187 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
188 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
189 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
190 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
191 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
192 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
193 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
194 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
195 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
196 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
197 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
198 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
199 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
200 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
201 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
202 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
203 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
204 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
205 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
206 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
207 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
208 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
209 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
210 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
211 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
212 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
213 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
214 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
215 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
216 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
217 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
218 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
219 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
220 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
221 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
222 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
223 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
224 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
225 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
226 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
227 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
228 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
229 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
230 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
231 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
232 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
233 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
234 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
235 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
236 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
237 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
238 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
239 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
240 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
241 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
242 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
243 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
244 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
245 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
246 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
247 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
248 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
249 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
250 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
251 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.94
Metatranscriptomes 0
Isolates 10.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.74
Nodule 1.83
Rhizoplane 6.1
Rhizosphere 78.05
Stem 0
Stem Tuber 0
Unclassified 11.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000456 3300001989 Bacteria 14322
2 JGI24735J21928_10000372 3300002067 Bacteria 15669
3 JGI25155J39150_1000270 3300002704 Bacteria 19032
4 JGI25156J39149_1000746 3300002705 Bacteria 17077
5 JGI25154J39366_1000148 3300002738 Bacteria 54914
6 rootH1_10044343 3300003316 Bacteria 4096
7 rootH1_10064687 3300003316 Bacteria 6889
8 rootH1_10064687 3300003323 Unclassified 1576
9 Ga0058692_1000139 3300003856 Bacteria 46218
10 Ga0065165_1000339 3300005262 Bacteria 76812
11 Ga0065714_10015394 3300005288 Bacteria 3556
12 Ga0065704_10076368 3300005289 Bacteria 5146
13 Ga0070658_10000096 3300005327 Bacteria 77523
14 Ga0070658_10013271 3300005327 Bacteria 6610
15 Ga0070670_100038967 3300005331 Bacteria 4086
16 Ga0070660_100000374 3300005339 Bacteria 29729
17 Ga0070687_100052751 3300005343 Bacteria 2112
18 Ga0070671_100105658 3300005355 Bacteria 2363
19 Ga0070688_100001125 3300005365 Bacteria 13396
20 Ga0070659_100016504 3300005366 Bacteria 5544
21 Ga0070667_100018802 3300005367 Bacteria 5730
22 Ga0070667_100119932 3300005367 Bacteria 2287
23 Ga0070663_100000258 3300005455 Bacteria 26478
24 Ga0068867_100024725 3300005459 Bacteria 4304
25 Ga0070706_100006049 3300005467 Bacteria 11436
26 Ga0070684_100077316 3300005535 Bacteria 2939
27 Ga0068853_100007462 3300005539 Bacteria 8753
28 Ga0070672_100086107 3300005543 Bacteria 2526
29 Ga0068855_100006634 3300005563 Bacteria 14056
30 Ga0068857_100103065 3300005577 Bacteria 2562
31 Ga0068856_100000250 3300005614 Bacteria 58371
32 Ga0068863_100145250 3300005841 Bacteria 2268
33 Ga0068858_100079370 3300005842 Bacteria 3050
34 Ga0068858_100116618 3300005842 Bacteria 2495
35 Ga0068860_100008403 3300005843 Bacteria 10283
36 Ga0068862_100184973 3300005844 Bacteria 1872
37 Ga0075370_10000416 3300006353 Bacteria 15732
38 Ga0075370_10003268 3300006353 Bacteria 7684
39 Ga0075370_10005117 3300006353 Bacteria 6464
40 Ga0068871_100098669 3300006358 Bacteria 2444
41 Ga0075429_100004525 3300006880 Bacteria 11957
42 Ga0105251_10004434 3300009011 Bacteria 9557
43 Ga0105244_10002369 3300009036 Bacteria 14300
44 Ga0105250_10000587 3300009092 Bacteria 23878
45 Ga0105250_10002761 3300009092 Bacteria 8625
46 Ga0105250_10003310 3300009092 Bacteria 7667
47 Ga0105240_10001449 3300009093 Bacteria 40535
48 Ga0105240_10005296 3300009093 Bacteria 19255
49 Ga0105240_10028635 3300009093 Bacteria 7271
50 Ga0105240_10257011 3300009093 Bacteria 2017
51 Ga0105247_10029995 3300009101 Unclassified 3297
52 Ga0114129_10087426 3300009147 Bacteria 4322
53 Ga0105243_10002142 3300009148 Bacteria 16689
54 Ga0105243_10002573 3300009148 Bacteria 15155
55 Ga0105243_10210483 3300009148 Bacteria 1712
56 Ga0105241_10046177 3300009174 Bacteria 3307
57 Ga0105237_10000882 3300009545 Bacteria 40534
58 Ga0105237_10001075 3300009545 Bacteria 36717
59 Ga0105237_10012017 3300009545 Bacteria 9145
60 Ga0105238_10005910 3300009551 Bacteria 12125
61 Ga0105238_10010795 3300009551 Bacteria 9179
62 Ga0105238_10048530 3300009551 Bacteria 4278
63 Ga0105239_10002413 3300010375 Bacteria 23803
64 Ga0105239_10004379 3300010375 Bacteria 16910
65 Ga0105239_10009768 3300010375 Bacteria 10785
66 Ga0105239_10022172 3300010375 Bacteria 6999
67 Ga0105239_10026696 3300010375 Bacteria 6356
68 Ga0105246_10011944 3300011119 Bacteria 5404
69 Ga0157373_10004948 3300013100 Bacteria 10013
70 Ga0157373_10036332 3300013100 Bacteria 3537
71 Ga0157371_10001439 3300013102 Bacteria 24717
72 Ga0157370_10052734 3300013104 Bacteria 3882
73 Ga0157369_10035325 3300013105 Bacteria 5482
74 Ga0157369_10078929 3300013105 Bacteria 3526
75 Ga0157374_10000123 3300013296 Bacteria 70359
76 Ga0157372_10001473 3300013307 Bacteria 25544
77 Ga0157375_10084994 3300013308 Bacteria 3214
78 Ga0182008_10002731 3300014497 Bacteria 10943
79 Ga0182008_10027575 3300014497 Bacteria 2876
80 Ga0157379_10005852 3300014968 Bacteria 10574
81 Ga0157379_10007389 3300014968 Bacteria 9516
82 Ga0157376_10119276 3300014969 Bacteria 2335
83 Ga0182006_1005039 3300015261 Bacteria 6355
84 Ga0182006_1013684 3300015261 Bacteria 3512
85 Ga0182007_10004592 3300015262 Bacteria 6238
86 Ga0182007_10006654 3300015262 Bacteria 4942
87 Ga0163161_10003422 3300017792 Bacteria 11127
88 Ga0214544_1000030 3300021320 Bacteria 153107
89 Ga0214542_1000026 3300021321 Bacteria 182145
90 Ga0214545_1000015 3300021324 Bacteria 182143
91 Ga0214543_1000036 3300021327 Bacteria 182143
92 Ga0209435_100092 3300025206 Bacteria 40616
93 Ga0209646_1000105 3300025246 Bacteria 163453
94 Ga0209026_1001604 3300025250 Bacteria 9688
95 Ga0209759_1000426 3300025256 Bacteria 51309
96 Ga0209676_1000232 3300025292 Bacteria 120363
97 Ga0209025_1001557 3300025294 Bacteria 29150
98 Ga0209758_1000801 3300025297 Bacteria 44590
99 Ga0209051_1025945 3300025303 Bacteria 2373
100 Ga0207696_1002678 3300025711 Bacteria 8547
101 Ga0207696_1003130 3300025711 Bacteria 7714
102 Ga0207655_1002433 3300025728 Bacteria 15136
103 Ga0207713_1009829 3300025735 Bacteria 5355
104 Ga0207713_1013272 3300025735 Bacteria 4350
105 Ga0207710_10047093 3300025900 Unclassified 1926
106 Ga0207647_10000257 3300025904 Bacteria 43652
107 Ga0207705_10000141 3300025909 Bacteria 77000
108 Ga0207705_10005147 3300025909 Bacteria 9802
109 Ga0207705_10045232 3300025909 Bacteria 3164
110 Ga0207684_10012548 3300025910 Bacteria 7364
111 Ga0207695_10002506 3300025913 Bacteria 26998
112 Ga0207695_10002737 3300025913 Bacteria 25702
113 Ga0207671_10015617 3300025914 Bacteria 5938
114 Ga0207671_10035114 3300025914 Bacteria 3723
115 Ga0207671_10055716 3300025914 Bacteria 2929
116 Ga0207662_10052488 3300025918 Bacteria 2426
117 Ga0207657_10000187 3300025919 Bacteria 64305
118 Ga0207657_10002890 3300025919 Bacteria 18447
119 Ga0207657_10065495 3300025919 Bacteria 3097
120 Ga0207657_10234231 3300025919 Bacteria 1468
121 Ga0207649_10152139 3300025920 Bacteria 1595
122 Ga0207681_10031652 3300025923 Bacteria 3457
123 Ga0207694_10004462 3300025924 Bacteria 10924
124 Ga0207694_10022196 3300025924 Bacteria 4813
125 Ga0207694_10153704 3300025924 Bacteria 1855
126 Ga0207650_10058077 3300025925 Bacteria 2880
127 Ga0207650_10208034 3300025925 Bacteria 1570
128 Ga0207690_10011262 3300025932 Bacteria 5342
129 Ga0207690_10042662 3300025932 Bacteria 2981
130 Ga0207690_10047103 3300025932 Bacteria 2859
131 Ga0207706_10007642 3300025933 Bacteria 9993
132 Ga0207709_10000117 3300025935 Bacteria 122667
133 Ga0207709_10001444 3300025935 Bacteria 16592
134 Ga0207709_10051832 3300025935 Bacteria 2516
135 Ga0207670_10031730 3300025936 Bacteria 3390
136 Ga0207691_10021258 3300025940 Bacteria 6129
137 Ga0207691_10062644 3300025940 Bacteria 3374
138 Ga0207711_10101263 3300025941 Bacteria 2549
139 Ga0207661_10068830 3300025944 Bacteria 2884
140 Ga0207679_10117543 3300025945 Bacteria 2110
141 Ga0207667_10069976 3300025949 Bacteria 3653
142 Ga0207651_10110285 3300025960 Bacteria 2064
143 Ga0207658_10056805 3300025986 Bacteria 2906
144 Ga0207639_10084178 3300026041 Bacteria 2526
145 Ga0207678_10000888 3300026067 Bacteria 27518
146 Ga0207702_10003382 3300026078 Bacteria 14619
147 Ga0207648_10065111 3300026089 Bacteria 3177
148 Ga0207674_10018968 3300026116 Bacteria 7457
149 Ga0207674_10118644 3300026116 Bacteria 2616
150 Ga0207683_10342699 3300026121 Bacteria 1371
151 Ga0209371_1000070 3300027312 Bacteria 206612
152 Ga0209371_1000421 3300027312 Bacteria 43622
153 Ga0268266_10058711 3300028379 Bacteria 3313
154 Ga0268264_10042604 3300028381 Bacteria 3758
155 Ga0265337_1001968 3300028556 Bacteria 9770
156 Ga0268256_1000058 3300030500 Bacteria 227005
157 Ga0268256_1000360 3300030500 Bacteria 43620
158 Ga0307408_100006989 3300031548 Bacteria 7467
159 Ga0307405_10024293 3300031731 Bacteria 3460
160 Ga0307405_10033454 3300031731 Bacteria 3049
161 Ga0307405_10084635 3300031731 Bacteria 2082
162 Ga0307412_10009843 3300031911 Bacteria 5491
163 Ga0307409_100126088 3300031995 Bacteria 2178
164 Ga0307409_100356788 3300031995 Bacteria 1382
165 Ga0307416_100034562 3300032002 Bacteria 3848
166 Ga0307414_10045606 3300032004 Bacteria 3003
167 Ga0373931_0005374 3300035691 Bacteria 5915
168 Ga0373937_0038855 3300036401 Bacteria 4337
169 Ga0373937_0067425 3300036401 Bacteria 3297
170 Ga0395899_0000042 3300037312 Bacteria 249820
171 Ga0395900_0000037 3300037418 Bacteria 249211
172 Ga0395898_0007183 3300037466 Bacteria 11824
173 Ga0395898_0124745 3300037466 Bacteria 2467
174 Ga0395905_0019368 3300037471 Bacteria 6451
175 Ga0395905_0038215 3300037471 Bacteria 4503
176 Ga0395905_0054687 3300037471 Bacteria 3735
177 Ga0395905_0172352 3300037471 Bacteria 2032
178 Ga0395901_0038621 3300038443 Bacteria 4938
179 Ga0395901_0297757 3300038443 Bacteria 1673
180 Ga0436365_1675205 3300039437 Bacteria 2163
181 Ga0436363_0709121 3300039450 Bacteria 13005
182 Ga0439436_0011355 3300041404 Bacteria 2705
183 Ga0439439_0002625 3300041406 Bacteria 3849
184 Ga0439447_000478 3300041407 Bacteria 14901
185 Ga0439466_0022824 3300041411 Bacteria 2205
186 Ga0439433_0000442 3300041999 Bacteria 7622
187 Ga0439445_0013916 3300042004 Bacteria 1953
188 Ga0439448_0000250 3300042005 Bacteria 11612
189 Ga0439432_002240 3300042006 Bacteria 7294
190 Ga0439451_000904 3300042009 Bacteria 5702
191 Ga0439452_018974 3300042010 Bacteria 1824
192 Ga0439456_000911 3300042013 Bacteria 5926
193 Ga0450902_000079 3300042137 Bacteria 9680
194 Ga0439458_0001801 3300042157 Bacteria 5331
195 Ga0439464_0002491 3300042439 Bacteria 4539
196 Ga0451577_0046638 3300042876 Bacteria 3877
197 Ga0495592_0026697 3300046454 Bacteria 4378
198 Ga0495590_0003615 3300046457 Bacteria 6296
199 Ga0495591_001569 3300046458 Bacteria 13924
200 Ga0495629_0001675 3300046459 Bacteria 17401
201 Ga0495638_0017144 3300046460 Bacteria 4835
202 Ga0495653_0047399 3300046463 Bacteria 3323
203 Ga0495580_0032814 3300046472 Bacteria 3742
204 Ga0495582_0001897 3300046473 Bacteria 11776
205 Ga0495605_0020024 3300046474 Bacteria 3560
206 Ga0495662_0009543 3300046476 Bacteria 4760
207 Ga0495664_0003157 3300046477 Bacteria 8945
208 Ga0495664_0009611 3300046477 Bacteria 5413
209 Ga0495596_0000941 3300046500 Bacteria 17322
210 Ga0495596_0027606 3300046500 Bacteria 2281
211 Ga0495606_0016775 3300046507 Bacteria 5567
212 Ga0495608_0020698 3300046511 Bacteria 4519
213 Ga0495618_0005873 3300046514 Bacteria 7463
214 Ga0495628_0038514 3300046516 Bacteria 3826
215 Ga0495630_0001602 3300046517 Bacteria 15721
216 Ga0495630_0091369 3300046517 Unclassified 2300
217 Ga0495643_0016016 3300046522 Bacteria 4413
218 Ga0495648_0000958 3300046524 Bacteria 29798
219 Ga0495666_0002791 3300046526 Bacteria 8732
220 Ga0495642_0006317 3300046528 Bacteria 4544
221 Ga0495652_0048868 3300046529 Bacteria 3623
222 Ga0495652_0105302 3300046529 Bacteria 2280
223 Ga0495665_0000641 3300046531 Bacteria 17840
224 Ga0495640_0002434 3300046533 Bacteria 14940
225 Ga0495587_0010539 3300046536 Bacteria 5878
226 Ga0495668_0021530 3300046616 Bacteria 3695
227 Ga0495634_0028704 3300046642 Bacteria 3859
228 Ga0495611_0063874 3300046648 Bacteria 1676
229 Ga0495625_0129698 3300046660 Bacteria 1709
230 Ga0495635_0000364 3300046663 Bacteria 28849
231 Ga0495661_0024506 3300046665 Bacteria 3905
232 Ga0495661_0036771 3300046665 Bacteria 3062
233 Ga0495599_0001197 3300046678 Bacteria 14709
234 Ga0495599_0010417 3300046678 Bacteria 5688
235 Ga0495623_0019962 3300046679 Bacteria 4333
236 Ga0495646_0010457 3300046680 Bacteria 5895
237 Ga0495613_0004830 3300046689 Bacteria 10107
238 Ga0495671_0015609 3300046692 Bacteria 4066
239 Ga0495671_0018488 3300046692 Bacteria 3698
240 Ga0495589_0001668 3300046794 Bacteria 12730
241 Ga0495600_0000923 3300046809 Bacteria 15758
242 Ga0495581_0018127 3300047315 Bacteria 4089
243 Ga0495604_0035315 3300047317 Bacteria 3948
244 Ga0495674_0010767 3300047319 Bacteria 8650
245 Ga0495674_0014684 3300047319 Bacteria 7328
246 Ga0495676_0006733 3300047321 Bacteria 10572
247 Ga0495680_0048766 3300047322 Bacteria 3323
248 Ga0495683_0003823 3300047323 Bacteria 8678
249 Ga0495683_0007449 3300047323 Bacteria 5915
250 Ga0495675_0011068 3300047444 Bacteria 5655
251 Ga0495679_000144 3300047446 Bacteria 64609
252 Ga0495679_000347 3300047446 Bacteria 36340
253 Ga0495673_0005168 3300047469 Bacteria 7947
254 Ga0495686_0010129 3300047472 Bacteria 6728
255 Ga0495593_0011384 3300047673 Bacteria 5110
256 Ga0495602_0044204 3300048088 Bacteria 4043
257 Ga0495602_0064342 3300048088 Bacteria 3171
258 Ga0495614_0004031 3300048089 Bacteria 6598
259 Ga0495626_0040453 3300048091 Bacteria 2202
260 Ga0496102_0004025 3300048905 Bacteria 12451
261 Ga0496104_0016345 3300048907 Bacteria 6740
262 Ga0496112_0013856 3300048915 Bacteria 7457
263 Ga0496113_0035171 3300048916 Bacteria 3662
264 Ga0496116_0103946 3300048919 Bacteria 1689
265 Ga0496117_0003711 3300048920 Bacteria 17534
266 Ga0496117_0051994 3300048920 Bacteria 2890
267 Ga0496117_0092092 3300048920 Bacteria 1948
268 Ga0496118_0004093 3300048921 Bacteria 17677
269 Ga0496118_0043102 3300048921 Bacteria 3552
270 Ga0496118_0142892 3300048921 Bacteria 1513
271 Ga0496121_0000866 3300048924 Bacteria 54662
272 Ga0496121_0049756 3300048924 Bacteria 3549
273 Ga0496122_0017152 3300048925 Bacteria 6789
274 Ga0496122_0026945 3300048925 Bacteria 4934
275 Ga0496123_0007433 3300048926 Bacteria 10317
276 Ga0496123_0033285 3300048926 Bacteria 3712
277 Ga0496124_0000275 3300048927 Bacteria 98848
278 Ga0496124_0083805 3300048927 Bacteria 2615
279 Ga0496124_0145065 3300048927 Bacteria 1869
280 Ga0496125_0050815 3300048928 Bacteria 3428
281 Ga0495682_0013952 3300049460 Bacteria 3050
282 Ga0495682_0015417 3300049460 Bacteria 2895
283 Ga0501297_001127 3300049520 Bacteria 2427
284 Ga0501043_0000247 3300049579 Bacteria 48981
285 Ga0501046_0000007 3300049580 Bacteria 356002
286 Ga0501047_0047202 3300049581 Bacteria 4160
287 Ga0501048_0000539 3300049582 Bacteria 26590
288 Ga0501253_002863 3300049683 Bacteria 1998
289 Ga0501080_0185731 3300049742 Bacteria 1912
290 Ga0501083_0000048 3300049744 Bacteria 87560
291 Ga0501265_000556 3300049762 Bacteria 3988
292 Ga0501035_0001794 3300049822 Bacteria 21685
293 Ga0501044_0005689 3300049823 Bacteria 13816
294 Ga0501045_0089440 3300049824 Bacteria 2275
295 nmdc:mga0k408_123956_c1 3300050493 Bacteria 1532
296 nmdc:mga09592_142252_c1 3300050508 Bacteria 2068

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10064687 rootH1_100646871 345
2 3300005365 Ga0070688_100001125 Ga0070688_1000011253 397
3 3300039450 Ga0436363_0709121 Ga0436363_0709121_3641_4891 399
4 3300049824 Ga0501045_0089440 Ga0501045_0089440_15_1235 399
5 3300042157 Ga0439458_0001801 Ga0439458_0001801_997_2271 403
6 3300025919 Ga0207657_10234231 Ga0207657_102342312 405
7 3300039437 Ga0436365_1675205 Ga0436365_1675205_822_2081 407
8 3300005327 Ga0070658_10000096 Ga0070658_1000009653 409
9 3300025909 Ga0207705_10000141 Ga0207705_1000014153 409
10 iso_pu_bacteria 2896317667 2896319168 409
11 3300005262 Ga0065165_1000339 Ga0065165_100033943 411
12 3300025292 Ga0209676_1000232 Ga0209676_100023282 411
13 3300025949 Ga0207667_10069976 Ga0207667_100699762 411
14 3300031731 Ga0307405_10033454 Ga0307405_100334542 411
15 3300032004 Ga0307414_10045606 Ga0307414_100456062 411
16 3300009093 Ga0105240_10028635 Ga0105240_100286353 412
17 3300005288 Ga0065714_10015394 Ga0065714_100153942 413
18 3300005614 Ga0068856_100000250 Ga0068856_10000025031 413
19 3300009093 Ga0105240_10257011 Ga0105240_102570112 413
20 3300009551 Ga0105238_10048530 Ga0105238_100485302 413
21 3300025924 Ga0207694_10153704 Ga0207694_101537042 413
22 3300026078 Ga0207702_10003382 Ga0207702_100033826 413
23 3300028556 Ga0265337_1001968 Ga0265337_10019686 413
24 3300036401 Ga0373937_0067425 Ga0373937_0067425_699_2030 413
25 3300046529 Ga0495652_0105302 Ga0495652_0105302_39_1376 413
26 3300005331 Ga0070670_100038967 Ga0070670_1000389673 414
27 3300025923 Ga0207681_10031652 Ga0207681_100316522 414
28 3300025925 Ga0207650_10058077 Ga0207650_100580772 414
29 3300025960 Ga0207651_10110285 Ga0207651_101102852 414
30 3300028379 Ga0268266_10058711 Ga0268266_100587112 414
31 3300031995 Ga0307409_100356788 Ga0307409_1003567882 414
32 3300046517 Ga0495630_0091369 Ga0495630_0091369_707_1963 415
33 3300049579 Ga0501043_0000247 Ga0501043_0000247_19592_20875 416
34 3300049580 Ga0501046_0000007 Ga0501046_0000007_338109_339392 416
35 3300049581 Ga0501047_0047202 Ga0501047_0047202_2766_4049 416
36 3300049582 Ga0501048_0000539 Ga0501048_0000539_11887_13170 416
37 3300049742 Ga0501080_0185731 Ga0501080_0185731_288_1571 416
38 3300049744 Ga0501083_0000048 Ga0501083_0000048_72701_73984 416
39 3300049822 Ga0501035_0001794 Ga0501035_0001794_7204_8487 416
40 3300049823 Ga0501044_0005689 Ga0501044_0005689_4461_5744 416
41 3300003856 Ga0058692_1000139 Ga0058692_100013942 417
42 3300027312 Ga0209371_1000421 Ga0209371_100042112 417
43 3300030500 Ga0268256_1000360 Ga0268256_100036041 417
44 3300048927 Ga0496124_0000275 Ga0496124_0000275_43717_45000 417
45 3300005842 Ga0068858_100079370 Ga0068858_1000793702 418
46 3300009101 Ga0105247_10029995 Ga0105247_100299954 418
47 3300025900 Ga0207710_10047093 Ga0207710_100470932 418
48 3300005539 Ga0068853_100007462 Ga0068853_1000074626 420
49 3300009093 Ga0105240_10001449 Ga0105240_1000144934 420
50 3300009174 Ga0105241_10046177 Ga0105241_100461772 420
51 3300009545 Ga0105237_10000882 Ga0105237_1000088234 420
52 3300009551 Ga0105238_10005910 Ga0105238_100059107 420
53 3300010375 Ga0105239_10004379 Ga0105239_100043796 420
54 3300010375 Ga0105239_10026696 Ga0105239_100266962 420
55 3300025914 Ga0207671_10055716 Ga0207671_100557161 420
56 3300025924 Ga0207694_10004462 Ga0207694_100044624 420
57 3300025936 Ga0207670_10031730 Ga0207670_100317304 420
58 3300026041 Ga0207639_10084178 Ga0207639_100841782 420
59 iso_pu_bacteria 2824600985 2824603789 420
60 iso_pu_bacteria 2824696289 2824696961 420
61 iso_pu_bacteria 2841941048 2841946104 420
62 iso_pu_bacteria 2904449895 2904455313 420
63 iso_pu_bacteria 2904456579 2904461345 420
64 iso_pu_bacteria 2919704043 2919706514 420
65 iso_pu_bacteria 2922393267 2922397902 420
66 3300031995 Ga0307409_100126088 Ga0307409_1001260882 421
67 iso_pu_bacteria 2599185240 2599748050 421
68 iso_pu_bacteria 2599185248 2599769997 421
69 iso_pu_bacteria 2599185289 2599887321 421
70 iso_pu_bacteria 2599185291 2599898514 421
71 iso_pu_bacteria 2599185305 2599958973 421
72 iso_pu_bacteria 2599185306 2599964247 421
73 iso_pu_bacteria 2599185308 2599975882 421
74 iso_pu_bacteria 2599185309 2599982453 421
75 iso_pu_bacteria 2599185311 2599994506 421
76 iso_pu_bacteria 2599185312 2599999354 421
77 iso_pu_bacteria 2599185314 2600009482 421
78 iso_pu_bacteria 2599185315 2600017183 421
79 iso_pu_bacteria 2599185321 2600052006 421
80 iso_pu_bacteria 2599185355 2600211215 421
81 iso_pu_bacteria 2667528170 2671091006 421
82 iso_pu_bacteria 2675903129 2676746172 421
83 iso_pu_bacteria 2808606386 2808982283 421
84 iso_pu_bacteria 2808606415 2809129916 421
85 iso_pu_bacteria 2808606419 2809149029 421
86 iso_pu_bacteria 2852618963 2852619168 421
87 iso_pu_bacteria 2900634093 2900643466 421
88 iso_pu_bacteria 2902682994 2902686853 421
89 iso_pu_bacteria 2904615490 2904623999 421
90 3300005459 Ga0068867_100024725 Ga0068867_1000247252 422
91 3300005535 Ga0070684_100077316 Ga0070684_1000773162 422
92 3300025920 Ga0207649_10152139 Ga0207649_101521392 422
93 3300025940 Ga0207691_10062644 Ga0207691_100626442 422
94 3300026089 Ga0207648_10065111 Ga0207648_100651112 422
95 3300049762 Ga0501265_000556 Ga0501265_000556_2643_3911 422
96 3300002704 JGI25155J39150_1000270 JGI25155J39150_10002706 424
97 3300002705 JGI25156J39149_1000746 JGI25156J39149_100074615 424
98 3300002738 JGI25154J39366_1000148 JGI25154J39366_100014844 424
99 3300005289 Ga0065704_10076368 Ga0065704_100763682 424
100 3300005343 Ga0070687_100052751 Ga0070687_1000527512 424
101 3300005355 Ga0070671_100105658 Ga0070671_1001056582 424
102 3300005367 Ga0070667_100018802 Ga0070667_1000188022 424
103 3300005367 Ga0070667_100119932 Ga0070667_1001199322 424
104 3300005467 Ga0070706_100006049 Ga0070706_10000604911 424
105 3300005543 Ga0070672_100086107 Ga0070672_1000861071 424
106 3300005577 Ga0068857_100103065 Ga0068857_1001030652 424
107 3300005841 Ga0068863_100145250 Ga0068863_1001452502 424
108 3300005842 Ga0068858_100116618 Ga0068858_1001166182 424
109 3300005843 Ga0068860_100008403 Ga0068860_1000084037 424
110 3300005844 Ga0068862_100184973 Ga0068862_1001849732 424
111 3300006353 Ga0075370_10000416 Ga0075370_1000041616 424
112 3300006353 Ga0075370_10003268 Ga0075370_100032683 424
113 3300006353 Ga0075370_10005117 Ga0075370_100051175 424
114 3300006358 Ga0068871_100098669 Ga0068871_1000986692 424
115 3300006880 Ga0075429_100004525 Ga0075429_1000045257 424
116 3300009036 Ga0105244_10002369 Ga0105244_100023693 424
117 3300009092 Ga0105250_10000587 Ga0105250_1000058718 424
118 3300009147 Ga0114129_10087426 Ga0114129_100874263 424
119 3300009148 Ga0105243_10002142 Ga0105243_100021425 424
120 3300009148 Ga0105243_10002573 Ga0105243_100025736 424
121 3300009148 Ga0105243_10210483 Ga0105243_102104832 424
122 3300009545 Ga0105237_10012017 Ga0105237_100120172 424
123 3300010375 Ga0105239_10022172 Ga0105239_100221724 424
124 3300011119 Ga0105246_10011944 Ga0105246_100119444 424
125 3300013308 Ga0157375_10084994 Ga0157375_100849941 424
126 3300014497 Ga0182008_10027575 Ga0182008_100275752 424
127 3300014968 Ga0157379_10005852 Ga0157379_100058522 424
128 3300014968 Ga0157379_10007389 Ga0157379_100073897 424
129 3300014969 Ga0157376_10119276 Ga0157376_101192762 424
130 3300015261 Ga0182006_1005039 Ga0182006_10050393 424
131 3300015262 Ga0182007_10006654 Ga0182007_100066543 424
132 3300021320 Ga0214544_1000030 Ga0214544_100003028 424
133 3300021321 Ga0214542_1000026 Ga0214542_100002628 424
134 3300021324 Ga0214545_1000015 Ga0214545_100001528 424
135 3300021327 Ga0214543_1000036 Ga0214543_100003628 424
136 3300025206 Ga0209435_100092 Ga0209435_1000927 424
137 3300025246 Ga0209646_1000105 Ga0209646_1000105109 424
138 3300025250 Ga0209026_1001604 Ga0209026_10016044 424
139 3300025256 Ga0209759_1000426 Ga0209759_10004267 424
140 3300025294 Ga0209025_1001557 Ga0209025_100155710 424
141 3300025297 Ga0209758_1000801 Ga0209758_100080120 424
142 3300025303 Ga0209051_1025945 Ga0209051_10259452 424
143 3300025728 Ga0207655_1002433 Ga0207655_10024339 424
144 3300025910 Ga0207684_10012548 Ga0207684_100125482 424
145 3300025913 Ga0207695_10002506 Ga0207695_1000250625 424
146 3300025914 Ga0207671_10015617 Ga0207671_100156174 424
147 3300025918 Ga0207662_10052488 Ga0207662_100524882 424
148 3300025919 Ga0207657_10002890 Ga0207657_100028907 424
149 3300025919 Ga0207657_10065495 Ga0207657_100654952 424
150 3300025932 Ga0207690_10011262 Ga0207690_100112622 424
151 3300025933 Ga0207706_10007642 Ga0207706_100076427 424
152 3300025935 Ga0207709_10000117 Ga0207709_100001176 424
153 3300025935 Ga0207709_10001444 Ga0207709_1000144413 424
154 3300025935 Ga0207709_10051832 Ga0207709_100518322 424
155 3300025940 Ga0207691_10021258 Ga0207691_100212582 424
156 3300025941 Ga0207711_10101263 Ga0207711_101012632 424
157 3300025986 Ga0207658_10056805 Ga0207658_100568052 424
158 3300026116 Ga0207674_10018968 Ga0207674_100189682 424
159 3300026116 Ga0207674_10118644 Ga0207674_101186442 424
160 3300026121 Ga0207683_10342699 Ga0207683_103426991 424
161 3300028381 Ga0268264_10042604 Ga0268264_100426042 424
162 3300031548 Ga0307408_100006989 Ga0307408_1000069896 424
163 3300031731 Ga0307405_10084635 Ga0307405_100846352 424
164 3300031911 Ga0307412_10009843 Ga0307412_100098433 424
165 3300032002 Ga0307416_100034562 Ga0307416_1000345622 424
166 3300036401 Ga0373937_0038855 Ga0373937_0038855_2856_4130 424
167 3300037471 Ga0395905_0019368 Ga0395905_0019368_1609_2883 424
168 3300037471 Ga0395905_0038215 Ga0395905_0038215_2445_3719 424
169 3300037471 Ga0395905_0054687 Ga0395905_0054687_1447_2721 424
170 3300038443 Ga0395901_0297757 Ga0395901_0297757_144_1418 424
171 3300041404 Ga0439436_0011355 Ga0439436_0011355_1034_2308 424
172 3300041999 Ga0439433_0000442 Ga0439433_0000442_3415_4689 424
173 3300042004 Ga0439445_0013916 Ga0439445_0013916_116_1390 424
174 3300042006 Ga0439432_002240 Ga0439432_002240_2777_4051 424
175 3300042010 Ga0439452_018974 Ga0439452_018974_254_1528 424
176 3300046522 Ga0495643_0016016 Ga0495643_0016016_1761_3035 424
177 3300046528 Ga0495642_0006317 Ga0495642_0006317_238_1512 424
178 3300046616 Ga0495668_0021530 Ga0495668_0021530_241_1515 424
179 3300047472 Ga0495686_0010129 Ga0495686_0010129_217_1491 424
180 3300048091 Ga0495626_0040453 Ga0495626_0040453_621_1895 424
181 3300048925 Ga0496122_0017152 Ga0496122_0017152_291_1565 424
182 3300048926 Ga0496123_0007433 Ga0496123_0007433_3820_5094 424
183 3300048927 Ga0496124_0083805 Ga0496124_0083805_633_1907 424
184 3300050493 nmdc:mga0k408_123956_c1 nmdc:mga0k408_123956_c1_204_1478 424
185 iso_pu_bacteria 2879083081 2879085050 424
186 iso_pu_bacteria 3005483717 3005488816 424
187 3300001989 JGI24739J22299_10000456 JGI24739J22299_100004565 425
188 3300002067 JGI24735J21928_10000372 JGI24735J21928_100003723 425
189 3300003316 rootH1_10044343 rootH1_100443433 425
190 3300005327 Ga0070658_10013271 Ga0070658_100132712 425
191 3300005339 Ga0070660_100000374 Ga0070660_10000037412 425
192 3300005366 Ga0070659_100016504 Ga0070659_1000165042 425
193 3300005455 Ga0070663_100000258 Ga0070663_10000025815 425
194 3300005563 Ga0068855_100006634 Ga0068855_10000663416 425
195 3300009011 Ga0105251_10004434 Ga0105251_100044346 425
196 3300009092 Ga0105250_10002761 Ga0105250_100027615 425
197 3300009092 Ga0105250_10003310 Ga0105250_100033105 425
198 3300009093 Ga0105240_10005296 Ga0105240_100052968 425
199 3300009545 Ga0105237_10001075 Ga0105237_1000107525 425
200 3300009551 Ga0105238_10010795 Ga0105238_100107959 425
201 3300010375 Ga0105239_10002413 Ga0105239_1000241313 425
202 3300010375 Ga0105239_10009768 Ga0105239_100097682 425
203 3300013100 Ga0157373_10004948 Ga0157373_100049489 425
204 3300013100 Ga0157373_10036332 Ga0157373_100363322 425
205 3300013102 Ga0157371_10001439 Ga0157371_1000143916 425
206 3300013104 Ga0157370_10052734 Ga0157370_100527342 425
207 3300013105 Ga0157369_10035325 Ga0157369_100353251 425
208 3300013105 Ga0157369_10078929 Ga0157369_100789293 425
209 3300013296 Ga0157374_10000123 Ga0157374_1000012324 425
210 3300013307 Ga0157372_10001473 Ga0157372_100014739 425
211 3300014497 Ga0182008_10002731 Ga0182008_100027313 425
212 3300015261 Ga0182006_1013684 Ga0182006_10136842 425
213 3300015262 Ga0182007_10004592 Ga0182007_100045923 425
214 3300017792 Ga0163161_10003422 Ga0163161_100034223 425
215 3300025711 Ga0207696_1002678 Ga0207696_10026784 425
216 3300025711 Ga0207696_1003130 Ga0207696_10031305 425
217 3300025735 Ga0207713_1009829 Ga0207713_10098294 425
218 3300025735 Ga0207713_1013272 Ga0207713_10132723 425
219 3300025904 Ga0207647_10000257 Ga0207647_1000025735 425
220 3300025909 Ga0207705_10005147 Ga0207705_100051472 425
221 3300025909 Ga0207705_10045232 Ga0207705_100452322 425
222 3300025913 Ga0207695_10002737 Ga0207695_100027378 425
223 3300025914 Ga0207671_10035114 Ga0207671_100351143 425
224 3300025919 Ga0207657_10000187 Ga0207657_1000018741 425
225 3300025924 Ga0207694_10022196 Ga0207694_100221963 425
226 3300025925 Ga0207650_10208034 Ga0207650_102080342 425
227 3300025932 Ga0207690_10042662 Ga0207690_100426622 425
228 3300025932 Ga0207690_10047103 Ga0207690_100471033 425
229 3300025944 Ga0207661_10068830 Ga0207661_100688302 425
230 3300025945 Ga0207679_10117543 Ga0207679_101175432 425
231 3300026067 Ga0207678_10000888 Ga0207678_1000088813 425
232 3300027312 Ga0209371_1000070 Ga0209371_100007034 425
233 3300030500 Ga0268256_1000058 Ga0268256_100005833 425
234 3300031731 Ga0307405_10024293 Ga0307405_100242932 425
235 3300035691 Ga0373931_0005374 Ga0373931_0005374_2913_4190 425
236 3300037312 Ga0395899_0000042 Ga0395899_0000042_4305_5582 425
237 3300037418 Ga0395900_0000037 Ga0395900_0000037_243630_244907 425
238 3300037466 Ga0395898_0007183 Ga0395898_0007183_4305_5582 425
239 3300037466 Ga0395898_0124745 Ga0395898_0124745_397_1674 425
240 3300037471 Ga0395905_0172352 Ga0395905_0172352_327_1604 425
241 3300038443 Ga0395901_0038621 Ga0395901_0038621_2275_3552 425
242 3300041406 Ga0439439_0002625 Ga0439439_0002625_1457_2734 425
243 3300041407 Ga0439447_000478 Ga0439447_000478_6000_7277 425
244 3300041411 Ga0439466_0022824 Ga0439466_0022824_241_1518 425
245 3300042005 Ga0439448_0000250 Ga0439448_0000250_74_1351 425
246 3300042009 Ga0439451_000904 Ga0439451_000904_3289_4566 425
247 3300042013 Ga0439456_000911 Ga0439456_000911_2550_3827 425
248 3300042137 Ga0450902_000079 Ga0450902_000079_6282_7634 425
249 3300042439 Ga0439464_0002491 Ga0439464_0002491_990_2273 425
250 3300042876 Ga0451577_0046638 Ga0451577_0046638_117_1469 425
251 3300046454 Ga0495592_0026697 Ga0495592_0026697_2845_4122 425
252 3300046457 Ga0495590_0003615 Ga0495590_0003615_2062_3339 425
253 3300046458 Ga0495591_001569 Ga0495591_001569_11051_12328 425
254 3300046459 Ga0495629_0001675 Ga0495629_0001675_12223_13500 425
255 3300046460 Ga0495638_0017144 Ga0495638_0017144_1957_3234 425
256 3300046463 Ga0495653_0047399 Ga0495653_0047399_63_1340 425
257 3300046472 Ga0495580_0032814 Ga0495580_0032814_144_1466 425
258 3300046473 Ga0495582_0001897 Ga0495582_0001897_3411_4688 425
259 3300046474 Ga0495605_0020024 Ga0495605_0020024_1644_2921 425
260 3300046476 Ga0495662_0009543 Ga0495662_0009543_1204_2481 425
261 3300046477 Ga0495664_0003157 Ga0495664_0003157_6095_7372 425
262 3300046477 Ga0495664_0009611 Ga0495664_0009611_803_2080 425
263 3300046500 Ga0495596_0000941 Ga0495596_0000941_12144_13421 425
264 3300046500 Ga0495596_0027606 Ga0495596_0027606_904_2181 425
265 3300046507 Ga0495606_0016775 Ga0495606_0016775_3127_4404 425
266 3300046511 Ga0495608_0020698 Ga0495608_0020698_2940_4217 425
267 3300046514 Ga0495618_0005873 Ga0495618_0005873_2637_3914 425
268 3300046516 Ga0495628_0038514 Ga0495628_0038514_1644_2921 425
269 3300046517 Ga0495630_0001602 Ga0495630_0001602_5790_7067 425
270 3300046524 Ga0495648_0000958 Ga0495648_0000958_22732_24009 425
271 3300046526 Ga0495666_0002791 Ga0495666_0002791_2896_4173 425
272 3300046529 Ga0495652_0048868 Ga0495652_0048868_2134_3411 425
273 3300046531 Ga0495665_0000641 Ga0495665_0000641_12018_13295 425
274 3300046533 Ga0495640_0002434 Ga0495640_0002434_12758_14035 425
275 3300046536 Ga0495587_0010539 Ga0495587_0010539_2374_3651 425
276 3300046642 Ga0495634_0028704 Ga0495634_0028704_1677_2954 425
277 3300046648 Ga0495611_0063874 Ga0495611_0063874_179_1456 425
278 3300046660 Ga0495625_0129698 Ga0495625_0129698_56_1333 425
279 3300046663 Ga0495635_0000364 Ga0495635_0000364_24742_26019 425
280 3300046665 Ga0495661_0024506 Ga0495661_0024506_495_1772 425
281 3300046665 Ga0495661_0036771 Ga0495661_0036771_624_1901 425
282 3300046678 Ga0495599_0001197 Ga0495599_0001197_4072_5349 425
283 3300046678 Ga0495599_0010417 Ga0495599_0010417_1437_2714 425
284 3300046679 Ga0495623_0019962 Ga0495623_0019962_2739_4016 425
285 3300046680 Ga0495646_0010457 Ga0495646_0010457_4124_5401 425
286 3300046689 Ga0495613_0004830 Ga0495613_0004830_1034_2311 425
287 3300046692 Ga0495671_0015609 Ga0495671_0015609_2170_3447 425
288 3300046692 Ga0495671_0018488 Ga0495671_0018488_1182_2459 425
289 3300046794 Ga0495589_0001668 Ga0495589_0001668_323_1600 425
290 3300046809 Ga0495600_0000923 Ga0495600_0000923_12193_13470 425
291 3300047315 Ga0495581_0018127 Ga0495581_0018127_2319_3596 425
292 3300047317 Ga0495604_0035315 Ga0495604_0035315_1236_2513 425
293 3300047319 Ga0495674_0010767 Ga0495674_0010767_5662_6939 425
294 3300047319 Ga0495674_0014684 Ga0495674_0014684_4676_5953 425
295 3300047321 Ga0495676_0006733 Ga0495676_0006733_2906_4183 425
296 3300047322 Ga0495680_0048766 Ga0495680_0048766_1984_3261 425
297 3300047323 Ga0495683_0003823 Ga0495683_0003823_4124_5401 425
298 3300047323 Ga0495683_0007449 Ga0495683_0007449_92_1369 425
299 3300047444 Ga0495675_0011068 Ga0495675_0011068_3884_5161 425
300 3300047446 Ga0495679_000144 Ga0495679_000144_3185_4462 425
301 3300047446 Ga0495679_000347 Ga0495679_000347_12385_13662 425
302 3300047469 Ga0495673_0005168 Ga0495673_0005168_2033_3310 425
303 3300047673 Ga0495593_0011384 Ga0495593_0011384_3771_5048 425
304 3300048088 Ga0495602_0044204 Ga0495602_0044204_2400_3677 425
305 3300048088 Ga0495602_0064342 Ga0495602_0064342_1211_2488 425
306 3300048089 Ga0495614_0004031 Ga0495614_0004031_2916_4193 425
307 3300048905 Ga0496102_0004025 Ga0496102_0004025_3890_5167 425
308 3300048907 Ga0496104_0016345 Ga0496104_0016345_340_1617 425
309 3300048915 Ga0496112_0013856 Ga0496112_0013856_1776_3059 425
310 3300048916 Ga0496113_0035171 Ga0496113_0035171_452_1729 425
311 3300048919 Ga0496116_0103946 Ga0496116_0103946_129_1406 425
312 3300048920 Ga0496117_0003711 Ga0496117_0003711_9275_10552 425
313 3300048920 Ga0496117_0051994 Ga0496117_0051994_992_2314 425
314 3300048920 Ga0496117_0092092 Ga0496117_0092092_623_1900 425
315 3300048921 Ga0496118_0004093 Ga0496118_0004093_9426_10703 425
316 3300048921 Ga0496118_0043102 Ga0496118_0043102_1740_3062 425
317 3300048921 Ga0496118_0142892 Ga0496118_0142892_29_1306 425
318 3300048924 Ga0496121_0000866 Ga0496121_0000866_6990_8267 425
319 3300048924 Ga0496121_0049756 Ga0496121_0049756_457_1734 425
320 3300048925 Ga0496122_0026945 Ga0496122_0026945_3465_4742 425
321 3300048926 Ga0496123_0033285 Ga0496123_0033285_751_2028 425
322 3300048927 Ga0496124_0145065 Ga0496124_0145065_357_1634 425
323 3300048928 Ga0496125_0050815 Ga0496125_0050815_317_1594 425
324 3300049460 Ga0495682_0013952 Ga0495682_0013952_1274_2551 425
325 3300049460 Ga0495682_0015417 Ga0495682_0015417_1234_2511 425
326 3300049520 Ga0501297_001127 Ga0501297_001127_724_2001 425
327 3300049683 Ga0501253_002863 Ga0501253_002863_684_1961 425
328 3300050508 nmdc:mga09592_142252_c1 nmdc:mga09592_142252_c1_118_1395 425

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00016

RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

211

489

0.96

PF02788

RuBisCO_large_N

Ribulose bisphosphate carboxylase large chain, N-terminal domain

75

201

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nwr-assembly1.cif.gz_A-2 crystal structure of a rubisco-like protein from burkholderia fungorum 0.9683 9 421
3nwr-assembly1.cif.gz_A-2 crystal structure of a rubisco-like protein from burkholderia fungorum 0.9612 9 421
1ykw-assembly1.cif.gz_B crystal structure of a novel rubisco-like protein from the green sulfur bacterium chlorobium tepidum 0.9413 9 421
1ykw-assembly1.cif.gz_A crystal structure of a novel rubisco-like protein from the green sulfur bacterium chlorobium tepidum 0.9367 9 421
2qyg-assembly2.cif.gz_D crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas palustris 0.9339 8 420
ID Description Score Start End Superfamily
3nwrA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RuBisCO large subunit, N-terminal domain 0.9766 9 138 3.30.70.150
3nwrA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.9666 140 421 3.20.20.110
3nwrA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RuBisCO large subunit, N-terminal domain 0.9604 9 138 3.30.70.150
2qygA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.9556 140 420 3.20.20.110
3nwrA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.9534 140 421 3.20.20.110
ID Description Score Start End GO Terms
AF-A0A528H3C9-F1-model_v4 Ribulose 1,5-bisphosphate carboxylase 0.9765 190 338 GO:0000287
GO:0016984
AF-A0A225MYS7-F1-model_v4 Ribulose 1,5-bisphosphate carboxylase 0.9759 10 423 GO:0000287
GO:0015977
GO:0016984
AF-A0A436G3H6-F1-model_v4 deleted 0.9755 195 425
AF-A0A519VMK2-F1-model_v4 Ribulose 1,5-bisphosphate carboxylase 0.9716 124 425 GO:0000287
GO:0015977
GO:0016984
AF-A0A519VMK2-F1-model_v4 Ribulose 1,5-bisphosphate carboxylase 0.9622 124 425 GO:0000287
GO:0015977
GO:0016984

Feature Viewer

pLDDT pTM Quality
93.06 0.91 High
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Predicted Structure (AlphaFold2)

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