F409164

General Info

Members Datasets Scaffolds Average Seq Length
328 190 656 492

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100076313|Ga0068859_1000763133
Length 529
Sequence MTDPLDTIRSQGDTLPRAPRRNAAIAATLSALALGVGALTLHAKEPDATLQPETAMQVPAAPSPAGTEQLADIIERVQPAVVNISVSRKIGGEMAMSGQSSGPDPRAYQGTPFDELLRRFFEMNPDAGGPRPQKAQALGSGFLVDPSGYVVTNNHVVEDADEIKVTLNDGTEYTATVKGRDPATDLALLKVDAPKALPAVSFGDSEHARVGEWVVAVGNPFGLGGSATAGIISARGRDIRSGPFDDYLQIDAPINMGNSGGPVFDMQGQVIGINTAIYSPNGGSVGIGFAIPSAMAQPIVAQLRDEGEVQRGWLGVEIQDLNADAAESLGLEDAKGALVASVAPDSPAAKAGLKTGDVIRTFDGKPVEHIKDLTRLVAAEGADKVPIEVWRDGKVTKVTAKLQRKDSESAQLAFNPQSDTDIDNGHGTHDARTGKLGLALAPINDQSREQFQLEDSAKGAVIVGVRPDSSAAEQGLRPGDVIEMVNQQEVTAPQQVVDAAKDAATHDRKALLLLVQRGEDKRFITLSLS

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
167 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
168 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
169 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
172 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
173 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
174 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
175 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
176 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
177 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
180 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
181 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
182 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
183 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
184 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
185 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
186 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
187 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
188 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
189 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
190 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.26
Metatranscriptomes 0.61
Isolates 2.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.33
Nodule 0
Rhizoplane 3.35
Rhizosphere 76.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100076313 3300005617 Bacteria 3392
2 Ga0006562J51391_1175878 3300003578 Bacteria 7940
3 Ga0006562J51391_1175880 3300003578 Bacteria 8420
4 Ga0055536_1002742 3300003781 Bacteria 9748
5 Ga0055530_10000656 3300003791 Bacteria 29624
6 Ga0055531_10021412 3300003794 Bacteria 2508
7 Ga0065165_1001111 3300005262 Bacteria 31835
8 Ga0065165_1028261 3300005262 Bacteria 1814
9 Ga0065707_10084578 3300005295 Bacteria 7038
10 Ga0070690_100015660 3300005330 Bacteria 4529
11 Ga0070670_100000035 3300005331 Bacteria 157570
12 Ga0070680_100002628 3300005336 Bacteria 13310
13 Ga0070680_100178284 3300005336 Bacteria 1789
14 Ga0068868_100020453 3300005338 Bacteria 4974
15 Ga0070668_100002169 3300005347 Bacteria 14374
16 Ga0070668_100017048 3300005347 Bacteria 5435
17 Ga0070669_100066070 3300005353 Bacteria 2665
18 Ga0070671_100002668 3300005355 Bacteria 13831
19 Ga0070671_100004912 3300005355 Bacteria 10646
20 Ga0070671_100101360 3300005355 Bacteria 2415
21 Ga0070688_100051007 3300005365 Bacteria 2580
22 Ga0070659_100002854 3300005366 Bacteria 12305
23 Ga0070659_100003124 3300005366 Bacteria 11788
24 Ga0070667_100001416 3300005367 Bacteria 21475
25 Ga0070667_100009536 3300005367 Bacteria 8049
26 Ga0070667_100016990 3300005367 Bacteria 6023
27 Ga0070701_10054356 3300005438 Bacteria 2088
28 Ga0070700_100011745 3300005441 Bacteria 4861
29 Ga0070662_100048680 3300005457 Bacteria 3054
30 Ga0070681_10005274 3300005458 Bacteria 12478
31 Ga0070681_10008925 3300005458 Bacteria 9853
32 Ga0070685_10004601 3300005466 Bacteria 6980
33 Ga0070679_100029021 3300005530 Bacteria 5457
34 Ga0070679_100031630 3300005530 Bacteria 5230
35 Ga0070684_100022921 3300005535 Bacteria 5214
36 Ga0068853_100068256 3300005539 Bacteria 3090
37 Ga0070695_100020416 3300005545 Bacteria 4046
38 Ga0070665_100000964 3300005548 Bacteria 36590
39 Ga0070665_100001251 3300005548 Bacteria 30694
40 Ga0070665_100015485 3300005548 Bacteria 7662
41 Ga0070665_100068051 3300005548 Bacteria 3570
42 Ga0070665_100099034 3300005548 Bacteria 2920
43 Ga0070704_100020829 3300005549 Bacteria 4238
44 Ga0068855_100165435 3300005563 Bacteria 2508
45 Ga0068856_100196737 3300005614 Bacteria 2030
46 Ga0068859_100000078 3300005617 Bacteria 91430
47 Ga0068859_100020448 3300005617 Bacteria 6643
48 Ga0068859_100033552 3300005617 Bacteria 5155
49 Ga0068864_100000038 3300005618 Bacteria 181005
50 Ga0068864_100000102 3300005618 Bacteria 82743
51 Ga0068864_100003724 3300005618 Bacteria 12588
52 Ga0068864_100019343 3300005618 Bacteria 5693
53 Ga0068864_100028516 3300005618 Bacteria 4720
54 Ga0068861_100010377 3300005719 Bacteria 6462
55 Ga0068863_100000026 3300005841 Bacteria 185590
56 Ga0068863_100000958 3300005841 Bacteria 28976
57 Ga0068863_100001882 3300005841 Bacteria 20834
58 Ga0068863_100013001 3300005841 Bacteria 8026
59 Ga0068858_100000117 3300005842 Bacteria 83778
60 Ga0068858_100002020 3300005842 Bacteria 20733
61 Ga0068858_100004011 3300005842 Bacteria 14523
62 Ga0068858_100008833 3300005842 Bacteria 9663
63 Ga0068860_100000157 3300005843 Bacteria 110717
64 Ga0068860_100110989 3300005843 Bacteria 2621
65 Ga0068862_100000782 3300005844 Bacteria 31544
66 Ga0068862_100015106 3300005844 Bacteria 6415
67 Ga0068862_100144996 3300005844 Bacteria 2110
68 Ga0075368_10001458 3300006042 Bacteria 7570
69 Ga0075363_100034265 3300006048 Bacteria 2650
70 Ga0075364_10000185 3300006051 Bacteria 28523
71 Ga0075367_10000704 3300006178 Bacteria 12896
72 Ga0075370_10046077 3300006353 Bacteria 2467
73 Ga0075430_100098197 3300006846 Bacteria 2447
74 Ga0075431_100055488 3300006847 Bacteria 4087
75 Ga0068865_100001350 3300006881 Bacteria 14286
76 Ga0097620_100000078 3300006931 Bacteria 91430
77 Ga0097620_100020448 3300006931 Bacteria 6643
78 Ga0097620_100033552 3300006931 Bacteria 5155
79 Ga0097620_100076312 3300006931 Bacteria 3392
80 Ga0105240_10000056 3300009093 Bacteria 224822
81 Ga0105240_10009481 3300009093 Bacteria 13782
82 Ga0105240_10090088 3300009093 Bacteria 3750
83 Ga0105240_10147559 3300009093 Bacteria 2805
84 Ga0111539_10016092 3300009094 Bacteria 9282
85 Ga0105247_10005070 3300009101 Bacteria 8350
86 Ga0105247_10060926 3300009101 Bacteria 2339
87 Ga0105248_10001354 3300009177 Bacteria 27302
88 Ga0105248_10003116 3300009177 Bacteria 18355
89 Ga0105248_10005900 3300009177 Bacteria 13467
90 Ga0105248_10017476 3300009177 Bacteria 7908
91 Ga0105248_10051568 3300009177 Bacteria 4617
92 Ga0105248_10159223 3300009177 Bacteria 2547
93 Ga0105238_10019129 3300009551 Bacteria 6978
94 Ga0105238_10093652 3300009551 Bacteria 2992
95 Ga0105249_10000472 3300009553 Bacteria 37443
96 Ga0105246_10007918 3300011119 Bacteria 6522
97 Ga0157370_10003083 3300013104 Bacteria 19738
98 Ga0157370_10197385 3300013104 Bacteria 1867
99 Ga0157369_10017090 3300013105 Bacteria 8152
100 Ga0163162_10000977 3300013306 Bacteria 26603
101 Ga0163162_10177930 3300013306 Bacteria 2253
102 Ga0163163_10002357 3300014325 Bacteria 15985
103 Ga0163163_10034095 3300014325 Bacteria 4928
104 Ga0163163_10043780 3300014325 Bacteria 4391
105 Ga0163163_10128384 3300014325 Bacteria 2574
106 Ga0157380_10000966 3300014326 Bacteria 18196
107 Ga0157380_10001710 3300014326 Bacteria 14488
108 Ga0157379_10001080 3300014968 Bacteria 22244
109 Ga0157379_10051142 3300014968 Bacteria 3691
110 Ga0157379_10059974 3300014968 Bacteria 3402
111 Ga0157376_10001488 3300014969 Bacteria 15447
112 Ga0157376_10065295 3300014969 Bacteria 3072
113 Ga0209676_1000038 3300025292 Bacteria 449305
114 Ga0209676_1003275 3300025292 Bacteria 10166
115 Ga0209758_1000424 3300025297 Bacteria 71558
116 Ga0209050_1000976 3300025298 Bacteria 36569
117 Ga0209050_1013393 3300025298 Bacteria 3646
118 Ga0209257_1000306 3300025304 Bacteria 105616
119 Ga0209257_1000457 3300025304 Bacteria 75784
120 Ga0209257_1000775 3300025304 Bacteria 47326
121 Ga0207696_1031370 3300025711 Bacteria 1608
122 Ga0207705_10012077 3300025909 Bacteria 6239
123 Ga0207705_10071213 3300025909 Bacteria 2520
124 Ga0207705_10092194 3300025909 Bacteria 2219
125 Ga0207707_10015625 3300025912 Bacteria 6613
126 Ga0207695_10000103 3300025913 Bacteria 257354
127 Ga0207695_10001157 3300025913 Bacteria 45752
128 Ga0207695_10007031 3300025913 Bacteria 14443
129 Ga0207695_10011600 3300025913 Bacteria 10656
130 Ga0207695_10030058 3300025913 Bacteria 5988
131 Ga0207695_10119353 3300025913 Bacteria 2607
132 Ga0207660_10006797 3300025917 Bacteria 7409
133 Ga0207660_10074401 3300025917 Bacteria 2479
134 Ga0207657_10001909 3300025919 Bacteria 22499
135 Ga0207657_10026627 3300025919 Bacteria 5308
136 Ga0207657_10035310 3300025919 Bacteria 4484
137 Ga0207652_10063526 3300025921 Bacteria 3193
138 Ga0207650_10000327 3300025925 Bacteria 46298
139 Ga0207644_10001019 3300025931 Bacteria 17921
140 Ga0207644_10004288 3300025931 Bacteria 9257
141 Ga0207644_10020771 3300025931 Bacteria 4466
142 Ga0207690_10000250 3300025932 Bacteria 39031
143 Ga0207690_10014348 3300025932 Bacteria 4787
144 Ga0207706_10060144 3300025933 Bacteria 3346
145 Ga0207704_10093563 3300025938 Bacteria 1982
146 Ga0207711_10002158 3300025941 Bacteria 17700
147 Ga0207711_10009968 3300025941 Bacteria 7897
148 Ga0207711_10031162 3300025941 Bacteria 4500
149 Ga0207711_10061106 3300025941 Bacteria 3248
150 Ga0207667_10068494 3300025949 Bacteria 3695
151 Ga0207667_10093382 3300025949 Bacteria 3107
152 Ga0207667_10282726 3300025949 Bacteria 1695
153 Ga0207712_10000287 3300025961 Bacteria 48043
154 Ga0207668_10000067 3300025972 Bacteria 83712
155 Ga0207668_10000666 3300025972 Bacteria 21082
156 Ga0207668_10004837 3300025972 Bacteria 7929
157 Ga0207658_10000144 3300025986 Bacteria 74430
158 Ga0207658_10001031 3300025986 Bacteria 22692
159 Ga0207658_10073301 3300025986 Bacteria 2598
160 Ga0207677_10004574 3300026023 Bacteria 7439
161 Ga0207703_10000087 3300026035 Bacteria 106113
162 Ga0207703_10013289 3300026035 Bacteria 6413
163 Ga0207703_10054419 3300026035 Bacteria 3254
164 Ga0207703_10091409 3300026035 Bacteria 2560
165 Ga0207639_10051062 3300026041 Bacteria 3143
166 Ga0207678_10101470 3300026067 Bacteria 2457
167 Ga0207708_10011086 3300026075 Bacteria 6703
168 Ga0207641_10000005 3300026088 Bacteria 470841
169 Ga0207641_10000389 3300026088 Bacteria 51956
170 Ga0207641_10022375 3300026088 Bacteria 5203
171 Ga0207641_10031619 3300026088 Bacteria 4390
172 Ga0207641_10051630 3300026088 Bacteria 3482
173 Ga0207648_10066946 3300026089 Bacteria 3132
174 Ga0207676_10000145 3300026095 Bacteria 61785
175 Ga0207676_10001469 3300026095 Bacteria 17504
176 Ga0207676_10002502 3300026095 Bacteria 13093
177 Ga0207676_10014194 3300026095 Bacteria 5723
178 Ga0207675_100016865 3300026118 Bacteria 6823
179 Ga0207675_100035767 3300026118 Bacteria 4632
180 Ga0207675_100058845 3300026118 Bacteria 3586
181 Ga0207683_10050225 3300026121 Bacteria 3653
182 Ga0207698_10103363 3300026142 Bacteria 2368
183 Ga0207698_10169244 3300026142 Bacteria 1922
184 Ga0209999_1000246 3300027543 Bacteria 7863
185 Ga0268266_10000005 3300028379 Bacteria 1448194
186 Ga0268266_10000814 3300028379 Bacteria 41101
187 Ga0268266_10069741 3300028379 Bacteria 3046
188 Ga0268265_10002705 3300028380 Bacteria 13121
189 Ga0268264_10000211 3300028381 Bacteria 117108
190 Ga0268264_10019834 3300028381 Bacteria 5492
191 Ga0268264_10114666 3300028381 Bacteria 2366
192 Ga0307517_10002714 3300028786 Bacteria 28250
193 Ga0265338_10012281 3300028800 Bacteria 9779
194 Ga0265338_10016410 3300028800 Bacteria 8062
195 Ga0265338_10021390 3300028800 Bacteria 6747
196 Ga0265338_10036091 3300028800 Bacteria 4738
197 Ga0265338_10043214 3300028800 Bacteria 4183
198 Ga0307511_10004879 3300030521 Bacteria 13702
199 Ga0307513_10000351 3300031456 Bacteria 67118
200 Ga0307513_10006561 3300031456 Bacteria 15198
201 Ga0307513_10016978 3300031456 Bacteria 8744
202 Ga0265314_10017183 3300031711 Bacteria 5685
203 Ga0265314_10036838 3300031711 Bacteria 3550
204 Ga0316576_10010256 3300031727 Bacteria 6078
205 Ga0316578_10052214 3300031728 Bacteria 2395
206 Ga0307406_10000238 3300031901 Bacteria 33353
207 Ga0307414_10023650 3300032004 Bacteria 3902
208 Ga0307414_10042612 3300032004 Bacteria 3085
209 Ga0307414_10055551 3300032004 Bacteria 2773
210 Ga0307414_10106383 3300032004 Bacteria 2123
211 Ga0373936_0003222 3300035113 Bacteria 6122
212 Ga0316574_0034559 3300035398 Bacteria 3083
213 Ga0373927_0000369 3300035695 Bacteria 34872
214 Ga0373933_0018417 3300035724 Bacteria 3927
215 Ga0373947_0073774 3300035725 Bacteria 2098
216 Ga0373937_0085138 3300036401 Bacteria 2925
217 Ga0316584_0034159 3300036712 Bacteria 3770
218 Ga0373925_0000111 3300037068 Bacteria 87426
219 Ga0395899_0003798 3300037312 Bacteria 11927
220 Ga0395899_0062843 3300037312 Bacteria 2733
221 Ga0395900_0000016 3300037418 Bacteria 382407
222 Ga0395900_0041875 3300037418 Bacteria 4720
223 Ga0395900_0095523 3300037418 Bacteria 3054
224 Ga0395898_0019910 3300037466 Bacteria 6823
225 Ga0395905_0008983 3300037471 Bacteria 9806
226 Ga0395901_0025908 3300038443 Bacteria 6022
227 Ga0395901_0078154 3300038443 Bacteria 3455
228 Ga0436365_0267574 3300039437 Bacteria 2695
229 Ga0436365_1298251 3300039437 Bacteria 3031
230 Ga0495629_0018904 3300046459 Bacteria 4925
231 Ga0495638_0001804 3300046460 Bacteria 18650
232 Ga0495643_0002973 3300046522 Bacteria 12830
233 Ga0495597_0002845 3300046542 Bacteria 10585
234 Ga0495622_0001612 3300046557 Bacteria 11139
235 Ga0495633_0000162 3300046558 Bacteria 87434
236 Ga0495611_0008910 3300046648 Bacteria 4243
237 Ga0495625_0001886 3300046660 Bacteria 23762
238 Ga0495625_0090469 3300046660 Bacteria 2117
239 Ga0495669_0000008 3300046684 Bacteria 177295
240 Ga0495613_0006318 3300046689 Bacteria 8862
241 Ga0495649_0010033 3300046694 Bacteria 5599
242 Ga0495672_0016782 3300047320 Bacteria 4915
243 Ga0495686_0000007 3300047472 Bacteria 732622
244 Ga0495686_0031956 3300047472 Bacteria 3409
245 Ga0495686_0040138 3300047472 Bacteria 2987
246 Ga0495686_0054575 3300047472 Bacteria 2502
247 Ga0495686_0071832 3300047472 Bacteria 2129
248 Ga0495593_0003737 3300047673 Bacteria 9082
249 Ga0496100_0028169 3300048903 Bacteria 3463
250 Ga0496102_0060608 3300048905 Bacteria 3461
251 Ga0496108_0021682 3300048911 Bacteria 5281
252 Ga0496109_0014169 3300048912 Bacteria 6933
253 Ga0496109_0019447 3300048912 Bacteria 5990
254 Ga0496112_0001448 3300048915 Bacteria 18222
255 Ga0496112_0168029 3300048915 Bacteria 2159
256 Ga0496113_0038926 3300048916 Bacteria 3498
257 Ga0496114_0156263 3300048917 Bacteria 1980
258 Ga0496115_0001821 3300048918 Bacteria 15250
259 Ga0496115_0035284 3300048918 Bacteria 3956
260 Ga0496117_0012828 3300048920 Bacteria 7348
261 Ga0496118_0005429 3300048921 Bacteria 14488
262 Ga0496119_0018647 3300048922 Bacteria 5152
263 Ga0496121_0000059 3300048924 Bacteria 278177
264 Ga0496121_0031198 3300048924 Bacteria 4874
265 Ga0496123_0016630 3300048926 Bacteria 5959
266 Ga0495682_0045661 3300049460 Bacteria 1600
267 Ga0501032_0000109 3300049569 Bacteria 70224
268 Ga0501033_0003481 3300049570 Bacteria 12913
269 Ga0501034_0076891 3300049571 Bacteria 3344
270 Ga0501037_0008330 3300049573 Bacteria 7599
271 Ga0501037_0060811 3300049573 Bacteria 2755
272 Ga0501038_0099095 3300049574 Bacteria 2429
273 Ga0501043_0035166 3300049579 Bacteria 3941
274 Ga0501047_0001567 3300049581 Bacteria 22372
275 Ga0501047_0019056 3300049581 Bacteria 6583
276 Ga0501047_0025698 3300049581 Bacteria 5663
277 Ga0501047_0058814 3300049581 Bacteria 3713
278 Ga0501067_0000115 3300049583 Bacteria 45062
279 Ga0501067_0019440 3300049583 Bacteria 3761
280 Ga0501068_0001894 3300049584 Bacteria 11122
281 Ga0501073_0000017 3300049589 Bacteria 155747
282 Ga0501073_0000626 3300049589 Bacteria 24850
283 Ga0501077_0000602 3300049593 Bacteria 21771
284 Ga0501080_0000408 3300049742 Bacteria 33028
285 Ga0501080_0009757 3300049742 Bacteria 8770
286 Ga0501035_0026055 3300049822 Bacteria 5355
287 Ga0501044_0001035 3300049823 Bacteria 33494
288 Ga0501044_0001183 3300049823 Bacteria 30911
289 Ga0501044_0005011 3300049823 Bacteria 14789
290 nmdc:mga00v17_1846_c1 3300050491 Bacteria 10941
291 nmdc:mga06z11_10431_c1 3300050494 Bacteria 3961
292 nmdc:mga07m45_3043_c1 3300050496 Bacteria 8005
293 nmdc:mga0qj67_55279_c1 3300050509 Bacteria 3144
294 nmdc:mga08y16_12047_c1 3300050511 Bacteria 9086
295 nmdc:mga08y16_246445_c1 3300050511 Bacteria 1846
296 Ga0500635_0000048 3300053080 Bacteria 80957
297 Ga0500643_000122 3300053087 Bacteria 81376
298 Ga0500643_000600 3300053087 Bacteria 24622
299 Ga0500643_012979 3300053087 Bacteria 2963
300 Ga0500644_0001102 3300053088 Bacteria 7968
301 Ga0500647_0036199 3300053091 Bacteria 2359
302 Ga0500641_0001075 3300053096 Bacteria 9739
303 Ga0500555_001452 3300053103 Bacteria 7242
304 Ga0500556_0014557 3300053104 Bacteria 2405
305 Ga0500562_001345 3300053108 Bacteria 6060
306 Ga0500569_003222 3300053109 Bacteria 3307
307 Ga0500572_000285 3300053111 Bacteria 18407
308 Ga0500608_000033 3300053122 Bacteria 64026
309 Ga0500608_000793 3300053122 Bacteria 11523
310 Ga0500614_003289 3300053123 Bacteria 3495
311 Ga0500559_0000006 3300053136 Bacteria 229895
312 Ga0500559_0002338 3300053136 Bacteria 9918
313 Ga0500604_0025740 3300053151 Bacteria 1693
314 Ga0500619_005700 3300053154 Bacteria 2803
315 Ga0500620_005990 3300053155 Bacteria 2870
316 Ga0500638_009707 3300053162 Bacteria 4178
317 Ga0500637_0001250 3300053178 Bacteria 10652
318 Ga0500645_000488 3300053730 Bacteria 26788
319 Ga0500645_000616 3300053730 Bacteria 22794
320 Ga0500645_001231 3300053730 Bacteria 13490
321 Ga0500645_001344 3300053730 Bacteria 12707
322 2643883973 2643221574 Bacteria 2789653
323 2644353222 2643221663 Bacteria 3425771
324 2644551235 2643221699 Bacteria 5731501
325 2644552512 2643221699 Bacteria 5731501
326 2928974090 2928972540 Bacteria 3058286
327 2941486303 2941485952 Bacteria 3591484
328 2977240942 2977240413 Bacteria 3191065
329 Ga0068859_100076313
330 Ga0006562J51391_1175878
331 Ga0006562J51391_1175880
332 Ga0055536_1002742
333 Ga0055530_10000656
334 Ga0055531_10021412
335 Ga0065165_1001111
336 Ga0065165_1028261
337 Ga0065707_10084578
338 Ga0070690_100015660
339 Ga0070670_100000035
340 Ga0070680_100002628
341 Ga0070680_100178284
342 Ga0068868_100020453
343 Ga0070668_100002169
344 Ga0070668_100017048
345 Ga0070669_100066070
346 Ga0070671_100002668
347 Ga0070671_100004912
348 Ga0070671_100101360
349 Ga0070688_100051007
350 Ga0070659_100002854
351 Ga0070659_100003124
352 Ga0070667_100001416
353 Ga0070667_100009536
354 Ga0070667_100016990
355 Ga0070701_10054356
356 Ga0070700_100011745
357 Ga0070662_100048680
358 Ga0070681_10005274
359 Ga0070681_10008925
360 Ga0070685_10004601
361 Ga0070679_100029021
362 Ga0070679_100031630
363 Ga0070684_100022921
364 Ga0068853_100068256
365 Ga0070695_100020416
366 Ga0070665_100000964
367 Ga0070665_100001251
368 Ga0070665_100015485
369 Ga0070665_100068051
370 Ga0070665_100099034
371 Ga0070704_100020829
372 Ga0068855_100165435
373 Ga0068856_100196737
374 Ga0068859_100000078
375 Ga0068859_100020448
376 Ga0068859_100033552
377 Ga0068864_100000038
378 Ga0068864_100000102
379 Ga0068864_100003724
380 Ga0068864_100019343
381 Ga0068864_100028516
382 Ga0068861_100010377
383 Ga0068863_100000026
384 Ga0068863_100000958
385 Ga0068863_100001882
386 Ga0068863_100013001
387 Ga0068858_100000117
388 Ga0068858_100002020
389 Ga0068858_100004011
390 Ga0068858_100008833
391 Ga0068860_100000157
392 Ga0068860_100110989
393 Ga0068862_100000782
394 Ga0068862_100015106
395 Ga0068862_100144996
396 Ga0075368_10001458
397 Ga0075363_100034265
398 Ga0075364_10000185
399 Ga0075367_10000704
400 Ga0075370_10046077
401 Ga0075430_100098197
402 Ga0075431_100055488
403 Ga0068865_100001350
404 Ga0097620_100000078
405 Ga0097620_100020448
406 Ga0097620_100033552
407 Ga0097620_100076312
408 Ga0105240_10000056
409 Ga0105240_10009481
410 Ga0105240_10090088
411 Ga0105240_10147559
412 Ga0111539_10016092
413 Ga0105247_10005070
414 Ga0105247_10060926
415 Ga0105248_10001354
416 Ga0105248_10003116
417 Ga0105248_10005900
418 Ga0105248_10017476
419 Ga0105248_10051568
420 Ga0105248_10159223
421 Ga0105238_10019129
422 Ga0105238_10093652
423 Ga0105249_10000472
424 Ga0105246_10007918
425 Ga0157370_10003083
426 Ga0157370_10197385
427 Ga0157369_10017090
428 Ga0163162_10000977
429 Ga0163162_10177930
430 Ga0163163_10002357
431 Ga0163163_10034095
432 Ga0163163_10043780
433 Ga0163163_10128384
434 Ga0157380_10000966
435 Ga0157380_10001710
436 Ga0157379_10001080
437 Ga0157379_10051142
438 Ga0157379_10059974
439 Ga0157376_10001488
440 Ga0157376_10065295
441 Ga0209676_1000038
442 Ga0209676_1003275
443 Ga0209758_1000424
444 Ga0209050_1000976
445 Ga0209050_1013393
446 Ga0209257_1000306
447 Ga0209257_1000457
448 Ga0209257_1000775
449 Ga0207696_1031370
450 Ga0207705_10012077
451 Ga0207705_10071213
452 Ga0207705_10092194
453 Ga0207707_10015625
454 Ga0207695_10000103
455 Ga0207695_10001157
456 Ga0207695_10007031
457 Ga0207695_10011600
458 Ga0207695_10030058
459 Ga0207695_10119353
460 Ga0207660_10006797
461 Ga0207660_10074401
462 Ga0207657_10001909
463 Ga0207657_10026627
464 Ga0207657_10035310
465 Ga0207652_10063526
466 Ga0207650_10000327
467 Ga0207644_10001019
468 Ga0207644_10004288
469 Ga0207644_10020771
470 Ga0207690_10000250
471 Ga0207690_10014348
472 Ga0207706_10060144
473 Ga0207704_10093563
474 Ga0207711_10002158
475 Ga0207711_10009968
476 Ga0207711_10031162
477 Ga0207711_10061106
478 Ga0207667_10068494
479 Ga0207667_10093382
480 Ga0207667_10282726
481 Ga0207712_10000287
482 Ga0207668_10000067
483 Ga0207668_10000666
484 Ga0207668_10004837
485 Ga0207658_10000144
486 Ga0207658_10001031
487 Ga0207658_10073301
488 Ga0207677_10004574
489 Ga0207703_10000087
490 Ga0207703_10013289
491 Ga0207703_10054419
492 Ga0207703_10091409
493 Ga0207639_10051062
494 Ga0207678_10101470
495 Ga0207708_10011086
496 Ga0207641_10000005
497 Ga0207641_10000389
498 Ga0207641_10022375
499 Ga0207641_10031619
500 Ga0207641_10051630
501 Ga0207648_10066946
502 Ga0207676_10000145
503 Ga0207676_10001469
504 Ga0207676_10002502
505 Ga0207676_10014194
506 Ga0207675_100016865
507 Ga0207675_100035767
508 Ga0207675_100058845
509 Ga0207683_10050225
510 Ga0207698_10103363
511 Ga0207698_10169244
512 Ga0209999_1000246
513 Ga0268266_10000005
514 Ga0268266_10000814
515 Ga0268266_10069741
516 Ga0268265_10002705
517 Ga0268264_10000211
518 Ga0268264_10019834
519 Ga0268264_10114666
520 Ga0307517_10002714
521 Ga0265338_10012281
522 Ga0265338_10016410
523 Ga0265338_10021390
524 Ga0265338_10036091
525 Ga0265338_10043214
526 Ga0307511_10004879
527 Ga0307513_10000351
528 Ga0307513_10006561
529 Ga0307513_10016978
530 Ga0265314_10017183
531 Ga0265314_10036838
532 Ga0316576_10010256
533 Ga0316578_10052214
534 Ga0307406_10000238
535 Ga0307414_10023650
536 Ga0307414_10042612
537 Ga0307414_10055551
538 Ga0307414_10106383
539 Ga0373936_0003222
540 Ga0316574_0034559
541 Ga0373927_0000369
542 Ga0373933_0018417
543 Ga0373947_0073774
544 Ga0373937_0085138
545 Ga0316584_0034159
546 Ga0373925_0000111
547 Ga0395899_0003798
548 Ga0395899_0062843
549 Ga0395900_0000016
550 Ga0395900_0041875
551 Ga0395900_0095523
552 Ga0395898_0019910
553 Ga0395905_0008983
554 Ga0395901_0025908
555 Ga0395901_0078154
556 Ga0436365_0267574
557 Ga0436365_1298251
558 Ga0495629_0018904
559 Ga0495638_0001804
560 Ga0495643_0002973
561 Ga0495597_0002845
562 Ga0495622_0001612
563 Ga0495633_0000162
564 Ga0495611_0008910
565 Ga0495625_0001886
566 Ga0495625_0090469
567 Ga0495669_0000008
568 Ga0495613_0006318
569 Ga0495649_0010033
570 Ga0495672_0016782
571 Ga0495686_0000007
572 Ga0495686_0031956
573 Ga0495686_0040138
574 Ga0495686_0054575
575 Ga0495686_0071832
576 Ga0495593_0003737
577 Ga0496100_0028169
578 Ga0496102_0060608
579 Ga0496108_0021682
580 Ga0496109_0014169
581 Ga0496109_0019447
582 Ga0496112_0001448
583 Ga0496112_0168029
584 Ga0496113_0038926
585 Ga0496114_0156263
586 Ga0496115_0001821
587 Ga0496115_0035284
588 Ga0496117_0012828
589 Ga0496118_0005429
590 Ga0496119_0018647
591 Ga0496121_0000059
592 Ga0496121_0031198
593 Ga0496123_0016630
594 Ga0495682_0045661
595 Ga0501032_0000109
596 Ga0501033_0003481
597 Ga0501034_0076891
598 Ga0501037_0008330
599 Ga0501037_0060811
600 Ga0501038_0099095
601 Ga0501043_0035166
602 Ga0501047_0001567
603 Ga0501047_0019056
604 Ga0501047_0025698
605 Ga0501047_0058814
606 Ga0501067_0000115
607 Ga0501067_0019440
608 Ga0501068_0001894
609 Ga0501073_0000017
610 Ga0501073_0000626
611 Ga0501077_0000602
612 Ga0501080_0000408
613 Ga0501080_0009757
614 Ga0501035_0026055
615 Ga0501044_0001035
616 Ga0501044_0001183
617 Ga0501044_0005011
618 nmdc:mga00v17_1846_c1
619 nmdc:mga06z11_10431_c1
620 nmdc:mga07m45_3043_c1
621 nmdc:mga0qj67_55279_c1
622 nmdc:mga08y16_12047_c1
623 nmdc:mga08y16_246445_c1
624 Ga0500635_0000048
625 Ga0500643_000122
626 Ga0500643_000600
627 Ga0500643_012979
628 Ga0500644_0001102
629 Ga0500647_0036199
630 Ga0500641_0001075
631 Ga0500555_001452
632 Ga0500556_0014557
633 Ga0500562_001345
634 Ga0500569_003222
635 Ga0500572_000285
636 Ga0500608_000033
637 Ga0500608_000793
638 Ga0500614_003289
639 Ga0500559_0000006
640 Ga0500559_0002338
641 Ga0500604_0025740
642 Ga0500619_005700
643 Ga0500620_005990
644 Ga0500638_009707
645 Ga0500637_0001250
646 Ga0500645_000488
647 Ga0500645_000616
648 Ga0500645_001231
649 Ga0500645_001344
650 2643883973
651 2644353222
652 2644551235
653 2644552512
654 2928974090
655 2941486303
656 2977240942

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

139

273

0.99

PF17820

PDZ_6

PDZ domain

338

391

0.98

PF13180

PDZ_2

PDZ domain

312

402

0.91

PF17820

PDZ_6

PDZ domain

461

517

0.88

PF00089

Trypsin

Trypsin

127

300

0.85

PF00595

PDZ

PDZ domain

302

390

0.85

PF00595

PDZ

PDZ domain

428

516

0.8

PF13180

PDZ_2

PDZ domain

434

528

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qf3-assembly1.cif.gz_C structure of the delta pdz truncation of the degs protease 0.918 59 285
7vge-assembly1.cif.gz_B structure of the pdz deleted variant of htra2 protease (s306a) 0.9157 62 275
7co2-assembly1.cif.gz_A htra-type protease algw with tripeptide 0.9144 61 388
8k2y-assembly1.cif.gz_C crystal structure of mucd 0.9132 61 387
3nwu-assembly1.cif.gz_C substrate induced remodeling of the active site regulates htra1 activity 0.9121 62 279
ID Description Score Start End Superfamily
3stjA01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9592 61 173 2.40.10.10
3pv2B02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9479 288 385 2.30.42.10
2z9iA03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9371 291 387 2.30.42.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9331 291 389 2.30.42.10
af_F1QL69_2_87_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9326 316 383 2.30.42.10
ID Description Score Start End GO Terms
AF-M5UH79-F1-model_v4 Aminopeptidase 0.9387 291 387 GO:0004177
GO:0006508
GO:0008235
AF-A0A0S8H8S4-F1-model_v4 PDZ domain-containing protein 0.9369 289 387
AF-A0A531KQ98-F1-model_v4 Trypsin-like serine protease 0.9337 122 297 GO:0004252
GO:0006508
AF-A0A3N5GC34-F1-model_v4 PDZ domain-containing protein 0.9288 293 387 GO:0004676
GO:0004677
GO:0004679
GO:0004711
GO:0005524
GO:0016020
GO:0035175
GO:0035402
GO:0035403
GO:0035979
GO:0044022
GO:0044023
GO:0044024
GO:0044025
GO:0072354
GO:0072371
GO:0072518
GO:0140823
GO:0140855
GO:0140857
GO:1990244
AF-A0A2P6W8M2-F1-model_v4 Trypsin 0.9278 62 217 GO:0004252
GO:0006508

Map