F409246

General Info

Members Datasets Scaffolds Average Seq Length
328 226 659 549

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10000162|Ga0157372_1000016211
Length 604
Sequence MNGTKITNFYRTASYSPEKIDLPEAANILIFAGHITMNRLKRLLRWLFYTFFVVTDLVFIFLAWFIITVTIKNPEIESADMGIVQKERTVKGPDFYTLSNSWIKKSETGLWEIYVEGDGFERGVTEGKLNKELAEKQEVAFVDQLQKMIPSRAMLNYLKFFIGFFNRNIDQYVIPEYKEEIYGESLYASDKFDFIAPKYYRMLNYHAAHDIGHALQDKNMTVGCTAFGAWGDKTDDGTLIIGRNFDFYVGDAFAEDKLINFVKPKDGYKFMMVSWAGMIGAVSGMNEKGLTVTLNASKSEIPTSAATPISLVAREILQYAKNINEALEIAKKRKTFVSESLFIGSAADKRTATIEKTPSRTELFESPEPDYIICANHYQGKAFETDKVNLENKEKSSSYYRYKHLDQLIRAQPQITVGDAAAILRNRTGMDGKNIGLGNEKSLNQLIAHHAVIFKPERLQVWVSTNPFQLGQFVCYDLNKIFAEAPGLDVKKELYEKPLNIPADTFLYSAEFARFKAWKHMKEAFHTVHKKQPDYKVDQKIIDAFISFNPESWETYAVLGDYYADNKDGEQAMRYYSQALKKEVTTVQDKEEIQKKISKIGAGL

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
45 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
67 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
99 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
117 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
152 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
153 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
154 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
155 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
156 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
163 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
164 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
165 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
166 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
169 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
170 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
171 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
172 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
173 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
174 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
175 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
176 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
177 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
178 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
179 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
180 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
181 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
182 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
183 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
184 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
185 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
186 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
187 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
188 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
189 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
190 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
191 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
192 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
193 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
194 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
195 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
196 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
197 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
198 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
199 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
200 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
201 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
202 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
203 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
204 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
205 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
206 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
207 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
208 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
209 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
210 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
211 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
212 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
213 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
214 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
215 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
216 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
217 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
218 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
219 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
220 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
221 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
222 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
223 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
224 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
225 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
226 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.62
Metatranscriptomes 0
Isolates 17.38

Biome Distribution

Category Percentage (%)
Aerial Root 0.61
Bulb 0
Endosphere 9.76
Nodule 1.52
Rhizoplane 0.61
Rhizosphere 66.46
Stem 0
Stem Tuber 0
Unclassified 5.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10000162 3300013307 Bacteria 73283
2 SwRhRL2b_contig_1762647 2162886007 Bacteria 207340
3 JGI24740J21852_10002848 3300001979 Bacteria 7733
4 JGI25154J39366_1000147 3300002738 Bacteria 55316
5 JGI25153J46596_10000327 3300003215 Bacteria 34410
6 rootH1_10000337 3300003316 Bacteria 26455
7 rootH1_10000337 3300003323 Bacteria 8315
8 rootH1_10013086 3300003316 Bacteria 20842
9 rootH1_10035175 3300003316 Bacteria 6811
10 rootH1_10078583 3300003316 Bacteria 5677
11 rootH1_10078583 3300003323 Bacteria 9821
12 rootH2_10001223 3300003320 Bacteria 131149
13 rootH2_10003246 3300003320 Bacteria 168239
14 rootH2_10022094 3300003320 Bacteria 2362
15 rootH2_10041684 3300003320 Bacteria 5137
16 rootH2_10045181 3300003320 Bacteria 6446
17 rootH2_10050665 3300003320 Bacteria 10767
18 rootH2_10055479 3300003320 Bacteria 7469
19 rootL2_10001834 3300003322 Bacteria 14710
20 rootL2_10019854 3300003322 Bacteria 11812
21 rootL2_10088705 3300003322 Bacteria 13494
22 rootL2_10110399 3300003322 Bacteria 3096
23 rootL2_10117304 3300003322 Bacteria 2154
24 rootH1_10002599 3300003316 Bacteria 7117
25 rootH1_10002599 3300003323 Bacteria 52591
26 rootH1_10008235 3300003323 Bacteria 40448
27 rootH1_10035284 3300003323 Bacteria 47456
28 rootH1_10035951 3300003323 Bacteria 13234
29 rootH1_10078422 3300003323 Bacteria 6499
30 rootH1_10132169 3300003323 Bacteria 6462
31 rootH1_10192936 3300003323 Bacteria 5890
32 rootH1_10342691 3300003323 Bacteria 2921
33 Ga0055535_1001595 3300003761 Bacteria 10769
34 Ga0055534_1006443 3300003784 Bacteria 2952
35 Ga0065165_1001781 3300005262 Bacteria 21283
36 Ga0065714_10064456 3300005288 Bacteria 70947
37 Ga0065704_10070151 3300005289 Bacteria 259038
38 Ga0065704_10070819 3300005289 Bacteria 15708
39 Ga0065704_10071943 3300005289 Bacteria 9558
40 Ga0065704_10073397 3300005289 Bacteria 7210
41 Ga0065704_10106473 3300005289 Bacteria 2082
42 Ga0070676_10000231 3300005328 Bacteria 23863
43 Ga0070683_100001467 3300005329 Bacteria 18149
44 Ga0068869_100031852 3300005334 Unclassified 3712
45 Ga0068869_100080419 3300005334 Unclassified 2431
46 Ga0070682_100000133 3300005337 Bacteria 61302
47 Ga0070660_100017985 3300005339 Bacteria 5158
48 Ga0070671_100034173 3300005355 Bacteria 4209
49 Ga0070673_100002509 3300005364 Bacteria 11199
50 Ga0070667_100074739 3300005367 Bacteria 2891
51 Ga0070678_100002152 3300005456 Bacteria 10686
52 Ga0068867_100000586 3300005459 Bacteria 24122
53 Ga0068867_100089270 3300005459 Unclassified 2337
54 Ga0070684_100008149 3300005535 Bacteria 8180
55 Ga0068853_100087454 3300005539 Bacteria 2735
56 Ga0068853_100135146 3300005539 Bacteria 2210
57 Ga0070672_100033547 3300005543 Bacteria 3888
58 Ga0070672_100081937 3300005543 Unclassified 2588
59 Ga0070665_100004098 3300005548 Bacteria 15327
60 Ga0068855_100180188 3300005563 Bacteria 2389
61 Ga0068854_100141163 3300005578 Bacteria 1849
62 Ga0068856_100213433 3300005614 Unclassified 1945
63 Ga0068852_100000614 3300005616 Bacteria 23382
64 Ga0068859_100053613 3300005617 Bacteria 4057
65 Ga0068864_100109697 3300005618 Unclassified 2457
66 Ga0068866_10014911 3300005718 Unclassified 3441
67 Ga0068861_100044964 3300005719 Bacteria 3323
68 Ga0068860_100045105 3300005843 Bacteria 4203
69 Ga0075366_10003801 3300006195 Bacteria 8032
70 Ga0097621_100001696 3300006237 Bacteria 15073
71 Ga0097621_100029927 3300006237 Bacteria 4305
72 Ga0097621_100132442 3300006237 Unclassified 2123
73 Ga0068871_100000154 3300006358 Bacteria 45466
74 Ga0068871_100042304 3300006358 Bacteria 3657
75 Ga0075428_100056369 3300006844 Bacteria 4304
76 Ga0068865_100000172 3300006881 Bacteria 35866
77 Ga0097620_100053614 3300006931 Bacteria 4057
78 Ga0079104_1000079 3300006946 Bacteria 141480
79 Ga0099826_10000143 3300006948 Bacteria 30506
80 Ga0105244_10000013 3300009036 Bacteria 258350
81 Ga0105240_10000101 3300009093 Bacteria 175584
82 Ga0105240_10286320 3300009093 Bacteria 1891
83 Ga0111539_10004369 3300009094 Bacteria 18516
84 Ga0111539_10015449 3300009094 Bacteria 9496
85 Ga0105243_10000416 3300009148 Bacteria 44803
86 Ga0105237_10003207 3300009545 Bacteria 19592
87 Ga0105238_10004527 3300009551 Bacteria 13763
88 Ga0105249_10160785 3300009553 Unclassified 2170
89 Ga0105239_10000860 3300010375 Bacteria 43145
90 Ga0105239_10006763 3300010375 Bacteria 13239
91 Ga0157373_10000017 3300013100 Bacteria 173186
92 Ga0157370_10001492 3300013104 Bacteria 28987
93 Ga0157370_10004398 3300013104 Bacteria 16165
94 Ga0157370_10113593 3300013104 Bacteria 2531
95 Ga0157369_10000136 3300013105 Bacteria 104612
96 Ga0157374_10000849 3300013296 Bacteria 26704
97 Ga0157378_10004350 3300013297 Bacteria 12462
98 Ga0163162_10005375 3300013306 Bacteria 12368
99 Ga0163162_10045597 3300013306 Bacteria 4392
100 Ga0163162_10053606 3300013306 Bacteria 4054
101 Ga0157372_10017611 3300013307 Bacteria 7668
102 Ga0157372_10020307 3300013307 Bacteria 7165
103 Ga0157375_10000334 3300013308 Bacteria 42495
104 Ga0157375_10003003 3300013308 Bacteria 14649
105 Ga0157375_10131546 3300013308 Bacteria 2622
106 Ga0163163_10025822 3300014325 Bacteria 5604
107 Ga0157380_10000038 3300014326 Bacteria 78487
108 Ga0157380_10014298 3300014326 Bacteria 5806
109 Ga0157380_10018297 3300014326 Bacteria 5199
110 Ga0157380_10087479 3300014326 Bacteria 2562
111 Ga0182008_10000036 3300014497 Bacteria 130349
112 Ga0157376_10035444 3300014969 Unclassified 4036
113 Ga0157376_10102455 3300014969 Bacteria 2504
114 Ga0182006_1000001 3300015261 Bacteria 1091090
115 Ga0182006_1001274 3300015261 Bacteria 15541
116 Ga0182006_1023819 3300015261 Bacteria 2533
117 Ga0182005_1000171 3300015265 Bacteria 44781
118 Ga0209436_100883 3300025208 Bacteria 11939
119 Ga0209436_101488 3300025208 Bacteria 8112
120 Ga0209258_100151 3300025242 Bacteria 160444
121 Ga0209646_1000002 3300025246 Bacteria 1425781
122 Ga0209026_1000226 3300025250 Bacteria 77076
123 Ga0209026_1000260 3300025250 Bacteria 65544
124 Ga0209148_1000154 3300025254 Bacteria 145214
125 Ga0209130_1000665 3300025284 Bacteria 31274
126 Ga0209675_1000034 3300025291 Bacteria 267827
127 Ga0209758_1000944 3300025297 Bacteria 39134
128 Ga0209050_1004486 3300025298 Bacteria 9399
129 Ga0207426_1000051 3300025302 Bacteria 391700
130 Ga0207426_1001033 3300025302 Bacteria 26579
131 Ga0209257_1000001 3300025304 Bacteria 2274655
132 Ga0207655_1000031 3300025728 Bacteria 392265
133 Ga0207647_10036153 3300025904 Bacteria 3140
134 Ga0207645_10000146 3300025907 Bacteria 55323
135 Ga0207645_10000496 3300025907 Bacteria 32469
136 Ga0207695_10000020 3300025913 Bacteria 723025
137 Ga0207695_10055913 3300025913 Bacteria 4109
138 Ga0207671_10004807 3300025914 Bacteria 12723
139 Ga0207657_10027936 3300025919 Bacteria 5158
140 Ga0207694_10030129 3300025924 Unclassified 4143
141 Ga0207644_10008131 3300025931 Bacteria 6872
142 Ga0207686_10020798 3300025934 Unclassified 3755
143 Ga0207709_10000216 3300025935 Bacteria 73193
144 Ga0207704_10000205 3300025938 Bacteria 30268
145 Ga0207689_10005978 3300025942 Bacteria 10766
146 Ga0207689_10017524 3300025942 Bacteria 6056
147 Ga0207689_10021338 3300025942 Bacteria 5446
148 Ga0207661_10010905 3300025944 Bacteria 6561
149 Ga0207651_10008192 3300025960 Bacteria 5627
150 Ga0207651_10110860 3300025960 Bacteria 2060
151 Ga0207668_10016486 3300025972 Bacteria 4612
152 Ga0207639_10019905 3300026041 Unclassified 4796
153 Ga0207702_10023133 3300026078 Bacteria 5154
154 Ga0207648_10000747 3300026089 Bacteria 36518
155 Ga0207648_10024163 3300026089 Bacteria 5430
156 Ga0207648_10080723 3300026089 Unclassified 2837
157 Ga0207683_10017003 3300026121 Bacteria 6190
158 Ga0207698_10054453 3300026142 Unclassified 3078
159 Ga0209281_1000045 3300027111 Bacteria 328124
160 Ga0209489_108596 3300027361 Bacteria 13695
161 Ga0268266_10003844 3300028379 Bacteria 14659
162 Ga0307515_10000001 3300028794 Bacteria 4259510
163 Ga0307515_10000077 3300028794 Bacteria 228162
164 Ga0307515_10000318 3300028794 Bacteria 118891
165 Ga0307515_10000394 3300028794 Bacteria 105754
166 Ga0265338_10136081 3300028800 Unclassified 1931
167 Ga0265327_10000009 3300031251 Bacteria 616360
168 Ga0265327_10000098 3300031251 Bacteria 190693
169 Ga0265327_10014552 3300031251 Bacteria 5137
170 Ga0307509_10002733 3300031507 Bacteria 28113
171 Ga0307514_10021081 3300031649 Bacteria 5312
172 Ga0316578_10080133 3300031728 Bacteria 1942
173 Ga0307412_10000006 3300031911 Bacteria 506878
174 Ga0307412_10000215 3300031911 Bacteria 39239
175 Ga0307416_100000016 3300032002 Bacteria 205465
176 Ga0307416_100000066 3300032002 Bacteria 94549
177 Ga0307414_10000224 3300032004 Bacteria 37374
178 Ga0307414_10001937 3300032004 Bacteria 10711
179 Ga0307507_10003974 3300033179 Bacteria 27186
180 Ga0373937_0125731 3300036401 Bacteria 2392
181 Ga0316582_0002075 3300036647 Bacteria 9235
182 Ga0316584_0000594 3300036712 Bacteria 19627
183 Ga0395905_0000003 3300037471 Bacteria 1347396
184 Ga0395905_0000393 3300037471 Bacteria 61918
185 Ga0439465_0000003 3300041413 Bacteria 72076
186 Ga0439431_0002343 3300041997 Bacteria 4185
187 Ga0439445_0000194 3300042004 Bacteria 11005
188 Ga0451577_0038974 3300042876 Bacteria 4271
189 Ga0451577_0118866 3300042876 Bacteria 2367
190 Ga0453684_0000165 3300044712 Bacteria 294572
191 Ga0453684_0000394 3300044712 Bacteria 179687
192 Ga0453684_0073080 3300044712 Unclassified 4326
193 Ga0451576_0008794 3300045051 Bacteria 11812
194 Ga0495627_000030 3300046453 Bacteria 228883
195 Ga0495627_026245 3300046453 Bacteria 1880
196 Ga0495638_0000006 3300046460 Bacteria 668846
197 Ga0495585_0000057 3300046492 Bacteria 113069
198 Ga0495585_0002221 3300046492 Bacteria 14066
199 Ga0495606_0004789 3300046507 Bacteria 13302
200 Ga0495606_0007660 3300046507 Bacteria 9577
201 Ga0495610_0000036 3300046512 Bacteria 186904
202 Ga0495610_0002655 3300046512 Bacteria 14764
203 Ga0495632_0002228 3300046519 Bacteria 14958
204 Ga0495648_0010988 3300046524 Bacteria 6861
205 Ga0495663_0000014 3300046525 Bacteria 149657
206 Ga0495654_0000142 3300046530 Bacteria 74610
207 Ga0495609_0000137 3300046538 Bacteria 77538
208 Ga0495645_0122591 3300046543 Bacteria 1829
209 Ga0495633_0000001 3300046558 Bacteria 801972
210 Ga0495633_0000012 3300046558 Bacteria 267875
211 Ga0495633_0001869 3300046558 Bacteria 15433
212 Ga0495668_0000055 3300046616 Bacteria 199412
213 Ga0495668_0000138 3300046616 Bacteria 109654
214 Ga0495625_0000818 3300046660 Bacteria 42880
215 Ga0495625_0001326 3300046660 Bacteria 30769
216 Ga0495625_0001759 3300046660 Bacteria 25032
217 Ga0495625_0078278 3300046660 Bacteria 2308
218 Ga0495687_002624 3300047443 Bacteria 14098
219 Ga0495687_002801 3300047443 Bacteria 13453
220 Ga0495686_0000327 3300047472 Bacteria 78430
221 Ga0495686_0000955 3300047472 Bacteria 35740
222 Ga0495686_0001850 3300047472 Bacteria 21228
223 Ga0496110_0183445 3300048913 Bacteria 1900
224 Ga0496114_0000244 3300048917 Bacteria 39586
225 Ga0496116_0000002 3300048919 Bacteria 920291
226 Ga0496116_0000068 3300048919 Bacteria 259724
227 Ga0496117_0000062 3300048920 Bacteria 257535
228 Ga0496118_0000113 3300048921 Bacteria 150726
229 Ga0496119_0000024 3300048922 Bacteria 257750
230 Ga0496121_0000020 3300048924 Bacteria 498732
231 Ga0496121_0027241 3300048924 Bacteria 5353
232 Ga0496122_0000245 3300048925 Bacteria 121737
233 Ga0496122_0000530 3300048925 Bacteria 79156
234 Ga0496122_0000666 3300048925 Bacteria 69147
235 Ga0496122_0002619 3300048925 Bacteria 25205
236 Ga0496122_0003993 3300048925 Bacteria 18811
237 Ga0496123_0000474 3300048926 Bacteria 69869
238 Ga0496123_0013299 3300048926 Bacteria 6928
239 Ga0496124_0002620 3300048927 Bacteria 23177
240 Ga0496124_0147862 3300048927 Bacteria 1847
241 Ga0496125_0000108 3300048928 Bacteria 196060
242 Ga0496125_0000454 3300048928 Bacteria 73947
243 Ga0496125_0008307 3300048928 Bacteria 10902
244 Ga0496126_0000957 3300048929 Bacteria 49532
245 Ga0496126_0007427 3300048929 Bacteria 12020
246 Ga0496126_0018878 3300048929 Bacteria 6813
247 Ga0501034_0018665 3300049571 Bacteria 7109
248 Ga0501047_0042485 3300049581 Bacteria 4393
249 Ga0501217_002714 3300049661 Bacteria 3511
250 Ga0501236_000990 3300049670 Bacteria 3216
251 Ga0501257_000341 3300049686 Bacteria 9006
252 Ga0501241_000004 3300049758 Bacteria 177326
253 Ga0501241_000511 3300049758 Bacteria 8374
254 Ga0501264_000120 3300049761 Bacteria 12058
255 Ga0501269_000256 3300049766 Bacteria 15195
256 Ga0501269_001263 3300049766 Bacteria 3396
257 Ga0501044_0107838 3300049823 Bacteria 2795
258 nmdc:mga0k408_65_c1 3300050493 Bacteria 52329
259 nmdc:mga08y16_25706_c1 3300050511 Bacteria 6211
260 Ga0500644_0000066 3300053088 Bacteria 61993
261 Ga0500583_0000075 3300053092 Bacteria 59561
262 Ga0500608_003368 3300053122 Bacteria 5988
263 Ga0500618_000033 3300053125 Bacteria 121886
264 Ga0500642_0000864 3300053130 Bacteria 8808
265 Ga0500652_004114 3300053131 Bacteria 4466
266 Ga0500652_023790 3300053131 Bacteria 2332
267 Ga0500559_0018594 3300053136 Bacteria 2936
268 Ga0500616_0001870 3300053153 Bacteria 19004
269 Ga0500616_0078730 3300053153 Bacteria 1662
270 Ga0500622_0000141 3300053156 Bacteria 76332
271 Ga0500622_0000155 3300053156 Bacteria 72050
272 Ga0500622_0001579 3300053156 Bacteria 17933
273 Ga0500622_0003424 3300053156 Bacteria 10636
274 Ga0500633_0000758 3300053160 Bacteria 5496
275 2511233480 2511231000 Bacteria 4488346
276 2520880481 2519899754 Bacteria 5336938
277 2585141933 2582581278 Bacteria 5296881
278 2585157765 2582581281 Bacteria 4487904
279 2585162102 2582581282 Bacteria 4495830
280 2585426371 2582581873 Bacteria 3032664
281 2587680332 2585428045 Bacteria 5203023
282 2587747413 2585428060 Bacteria 5304711
283 2587752798 2585428061 Bacteria 3939663
284 2587866445 2585428095 Bacteria 3789702
285 2587944745 2585428115 Bacteria 4420269
286 2588212034 2585428182 Bacteria 5007281
287 2588216302 2585428183 Bacteria 5166119
288 2588221128 2585428184 Bacteria 4978681
289 2588225578 2585428185 Bacteria 4969476
290 2588231954 2585428187 Bacteria 4629388
291 2588448083 2588253712 Bacteria 5403181
292 2590604015 2588254255 Bacteria 5014294
293 2590609362 2588254257 Bacteria 5436094
294 2644012118 2643221600 Bacteria 5530138
295 2644682488 2643221725 Bacteria 5087956
296 2729203089 2728369107 Bacteria 5082720
297 2740059644 2739367874 Bacteria 4872888
298 2753674768 2751185877 Bacteria 4921427
299 2765574823 2765235839 Bacteria 5314748
300 2772606171 2772190705 Bacteria 4666226
301 2775675034 2775506739 Bacteria 3855222
302 2816876108 2816332188 Bacteria 5133218
303 2817414146 2816332280 Bacteria 5109718
304 2842087089 2842083920 Bacteria 4857652
305 2871721571 2871720351 Bacteria 4862476
306 2881361448 2881359912 Bacteria 4935907
307 2881956446 2881955468 Bacteria 3545609
308 2883072637 2883068021 Bacteria 6192739
309 2889294624 2889290771 Bacteria 5530962
310 2896087803 2896085136 Bacteria 6129793
311 2896112491 2896109856 Bacteria 7140722
312 2903895224 2903895155 Bacteria 5258610
313 2906002737 2905999023 Bacteria 4591259
314 2919100290 2919097161 Bacteria 3860339
315 2919192416 2919191525 Bacteria 5765973
316 2919402081 2919399522 Bacteria 5164947
317 2945925507 2945924605 Bacteria 4296724
318 2945981257 2945977869 Bacteria 7777518
319 2946023283 2946019816 Bacteria 4621265
320 2958459570 2958458903 Bacteria 5301041
321 2977244343 2977243572 Bacteria 4374394
322 2977272674 2977268062 Bacteria 5243061
323 2984573765 2984572630 Bacteria 4186940
324 2984607205 2984606641 Bacteria 4186971
325 2993375812 2993372514 Bacteria 4214139
326 2993482674 2993480792 Bacteria 4022225
327 8036736923 8036736890 Bacteria 2944828
328 8054310855 8054307821 Bacteria 5212224
329 8055420107 8055419101 Bacteria 5289643
330 8055596996 8055592153 Bacteria 5961247
331 8056440910 8056440228 Bacteria 4946504
332 Ga0157372_10000162
333 SwRhRL2b_contig_1762647
334 JGI24740J21852_10002848
335 JGI25154J39366_1000147
336 JGI25153J46596_10000327
337 rootH1_10000337
338 rootH1_10013086
339 rootH1_10035175
340 rootH1_10078583
341 rootH2_10001223
342 rootH2_10003246
343 rootH2_10022094
344 rootH2_10041684
345 rootH2_10045181
346 rootH2_10050665
347 rootH2_10055479
348 rootL2_10001834
349 rootL2_10019854
350 rootL2_10088705
351 rootL2_10110399
352 rootL2_10117304
353 rootH1_10002599
354 rootH1_10008235
355 rootH1_10035284
356 rootH1_10035951
357 rootH1_10078422
358 rootH1_10132169
359 rootH1_10192936
360 rootH1_10342691
361 Ga0055535_1001595
362 Ga0055534_1006443
363 Ga0065165_1001781
364 Ga0065714_10064456
365 Ga0065704_10070151
366 Ga0065704_10070819
367 Ga0065704_10071943
368 Ga0065704_10073397
369 Ga0065704_10106473
370 Ga0070676_10000231
371 Ga0070683_100001467
372 Ga0068869_100031852
373 Ga0068869_100080419
374 Ga0070682_100000133
375 Ga0070660_100017985
376 Ga0070671_100034173
377 Ga0070673_100002509
378 Ga0070667_100074739
379 Ga0070678_100002152
380 Ga0068867_100000586
381 Ga0068867_100089270
382 Ga0070684_100008149
383 Ga0068853_100087454
384 Ga0068853_100135146
385 Ga0070672_100033547
386 Ga0070672_100081937
387 Ga0070665_100004098
388 Ga0068855_100180188
389 Ga0068854_100141163
390 Ga0068856_100213433
391 Ga0068852_100000614
392 Ga0068859_100053613
393 Ga0068864_100109697
394 Ga0068866_10014911
395 Ga0068861_100044964
396 Ga0068860_100045105
397 Ga0075366_10003801
398 Ga0097621_100001696
399 Ga0097621_100029927
400 Ga0097621_100132442
401 Ga0068871_100000154
402 Ga0068871_100042304
403 Ga0075428_100056369
404 Ga0068865_100000172
405 Ga0097620_100053614
406 Ga0079104_1000079
407 Ga0099826_10000143
408 Ga0105244_10000013
409 Ga0105240_10000101
410 Ga0105240_10286320
411 Ga0111539_10004369
412 Ga0111539_10015449
413 Ga0105243_10000416
414 Ga0105237_10003207
415 Ga0105238_10004527
416 Ga0105249_10160785
417 Ga0105239_10000860
418 Ga0105239_10006763
419 Ga0157373_10000017
420 Ga0157370_10001492
421 Ga0157370_10004398
422 Ga0157370_10113593
423 Ga0157369_10000136
424 Ga0157374_10000849
425 Ga0157378_10004350
426 Ga0163162_10005375
427 Ga0163162_10045597
428 Ga0163162_10053606
429 Ga0157372_10017611
430 Ga0157372_10020307
431 Ga0157375_10000334
432 Ga0157375_10003003
433 Ga0157375_10131546
434 Ga0163163_10025822
435 Ga0157380_10000038
436 Ga0157380_10014298
437 Ga0157380_10018297
438 Ga0157380_10087479
439 Ga0182008_10000036
440 Ga0157376_10035444
441 Ga0157376_10102455
442 Ga0182006_1000001
443 Ga0182006_1001274
444 Ga0182006_1023819
445 Ga0182005_1000171
446 Ga0209436_100883
447 Ga0209436_101488
448 Ga0209258_100151
449 Ga0209646_1000002
450 Ga0209026_1000226
451 Ga0209026_1000260
452 Ga0209148_1000154
453 Ga0209130_1000665
454 Ga0209675_1000034
455 Ga0209758_1000944
456 Ga0209050_1004486
457 Ga0207426_1000051
458 Ga0207426_1001033
459 Ga0209257_1000001
460 Ga0207655_1000031
461 Ga0207647_10036153
462 Ga0207645_10000146
463 Ga0207645_10000496
464 Ga0207695_10000020
465 Ga0207695_10055913
466 Ga0207671_10004807
467 Ga0207657_10027936
468 Ga0207694_10030129
469 Ga0207644_10008131
470 Ga0207686_10020798
471 Ga0207709_10000216
472 Ga0207704_10000205
473 Ga0207689_10005978
474 Ga0207689_10017524
475 Ga0207689_10021338
476 Ga0207661_10010905
477 Ga0207651_10008192
478 Ga0207651_10110860
479 Ga0207668_10016486
480 Ga0207639_10019905
481 Ga0207702_10023133
482 Ga0207648_10000747
483 Ga0207648_10024163
484 Ga0207648_10080723
485 Ga0207683_10017003
486 Ga0207698_10054453
487 Ga0209281_1000045
488 Ga0209489_108596
489 Ga0268266_10003844
490 Ga0307515_10000001
491 Ga0307515_10000077
492 Ga0307515_10000318
493 Ga0307515_10000394
494 Ga0265338_10136081
495 Ga0265327_10000009
496 Ga0265327_10000098
497 Ga0265327_10014552
498 Ga0307509_10002733
499 Ga0307514_10021081
500 Ga0316578_10080133
501 Ga0307412_10000006
502 Ga0307412_10000215
503 Ga0307416_100000016
504 Ga0307416_100000066
505 Ga0307414_10000224
506 Ga0307414_10001937
507 Ga0307507_10003974
508 Ga0373937_0125731
509 Ga0316582_0002075
510 Ga0316584_0000594
511 Ga0395905_0000003
512 Ga0395905_0000393
513 Ga0439465_0000003
514 Ga0439431_0002343
515 Ga0439445_0000194
516 Ga0451577_0038974
517 Ga0451577_0118866
518 Ga0453684_0000165
519 Ga0453684_0000394
520 Ga0453684_0073080
521 Ga0451576_0008794
522 Ga0495627_000030
523 Ga0495627_026245
524 Ga0495638_0000006
525 Ga0495585_0000057
526 Ga0495585_0002221
527 Ga0495606_0004789
528 Ga0495606_0007660
529 Ga0495610_0000036
530 Ga0495610_0002655
531 Ga0495632_0002228
532 Ga0495648_0010988
533 Ga0495663_0000014
534 Ga0495654_0000142
535 Ga0495609_0000137
536 Ga0495645_0122591
537 Ga0495633_0000001
538 Ga0495633_0000012
539 Ga0495633_0001869
540 Ga0495668_0000055
541 Ga0495668_0000138
542 Ga0495625_0000818
543 Ga0495625_0001326
544 Ga0495625_0001759
545 Ga0495625_0078278
546 Ga0495687_002624
547 Ga0495687_002801
548 Ga0495686_0000327
549 Ga0495686_0000955
550 Ga0495686_0001850
551 Ga0496110_0183445
552 Ga0496114_0000244
553 Ga0496116_0000002
554 Ga0496116_0000068
555 Ga0496117_0000062
556 Ga0496118_0000113
557 Ga0496119_0000024
558 Ga0496121_0000020
559 Ga0496121_0027241
560 Ga0496122_0000245
561 Ga0496122_0000530
562 Ga0496122_0000666
563 Ga0496122_0002619
564 Ga0496122_0003993
565 Ga0496123_0000474
566 Ga0496123_0013299
567 Ga0496124_0002620
568 Ga0496124_0147862
569 Ga0496125_0000108
570 Ga0496125_0000454
571 Ga0496125_0008307
572 Ga0496126_0000957
573 Ga0496126_0007427
574 Ga0496126_0018878
575 Ga0501034_0018665
576 Ga0501047_0042485
577 Ga0501217_002714
578 Ga0501236_000990
579 Ga0501257_000341
580 Ga0501241_000004
581 Ga0501241_000511
582 Ga0501264_000120
583 Ga0501269_000256
584 Ga0501269_001263
585 Ga0501044_0107838
586 nmdc:mga0k408_65_c1
587 nmdc:mga08y16_25706_c1
588 Ga0500644_0000066
589 Ga0500583_0000075
590 Ga0500608_003368
591 Ga0500618_000033
592 Ga0500642_0000864
593 Ga0500652_004114
594 Ga0500652_023790
595 Ga0500559_0018594
596 Ga0500616_0001870
597 Ga0500616_0078730
598 Ga0500622_0000141
599 Ga0500622_0000155
600 Ga0500622_0001579
601 Ga0500622_0003424
602 Ga0500633_0000758
603 2511233480
604 2520880481
605 2585141933
606 2585157765
607 2585162102
608 2585426371
609 2587680332
610 2587747413
611 2587752798
612 2587866445
613 2587944745
614 2588212034
615 2588216302
616 2588221128
617 2588225578
618 2588231954
619 2588448083
620 2590604015
621 2590609362
622 2644012118
623 2644682488
624 2729203089
625 2740059644
626 2753674768
627 2765574823
628 2772606171
629 2775675034
630 2816876108
631 2817414146
632 2842087089
633 2871721571
634 2881361448
635 2881956446
636 2883072637
637 2889294624
638 2896087803
639 2896112491
640 2903895224
641 2906002737
642 2919100290
643 2919192416
644 2919402081
645 2945925507
646 2945981257
647 2946023283
648 2958459570
649 2977244343
650 2977272674
651 2984573765
652 2984607205
653 2993375812
654 2993482674
655 8036736923
656 8054310855
657 8055420107
658 8055596996
659 8056440910

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03417

AAT

Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase

233

465

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ump-assembly1.cif.gz_A t33-ml35 - designed tetrahedral protein cage using machine learning algorithms 0.8817 478 542
1na0-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.8815 478 540
1na0-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8812 478 540
6v8e-assembly1.cif.gz_A computationally designed c3-symmetric homotrimer from tpr repeat protein 0.8743 478 540
2gw1-assembly1.cif.gz_B crystal structure of the yeast tom70 0.8672 478 541
ID Description Score Start End Superfamily
af_Q55BZ5_169_338_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.898 166 315 3.60.60.10
af_Q67YJ9_125_315_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8961 478 536 1.25.40.10
1na0A00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8815 478 540 1.25.40.10
1na0B00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8812 478 540 1.25.40.10
2fo7A00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8738 478 517 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A3D3CVE5-F1-model_v4 Peptidase C45 0.9888 214 540
AF-A0A3D3CVE5-F1-model_v4 Peptidase C45 0.9828 214 540
AF-A0A136NBF8-F1-model_v4 Peptidase C45 0.9818 3 538 GO:0016020
AF-A0A1M3EC76-F1-model_v4 Peptidase C45 hydrolase domain-containing protein 0.9816 4 536 GO:0016020
AF-A0A3D6EQV9-F1-model_v4 Peptidase C45 0.9809 4 448 GO:0016020

Map