F409304

General Info

Members Datasets Scaffolds Average Seq Length
328 208 630 466

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10011817|Ga0307405_100118173
Length 536
Sequence MSVMLPLTIEILLLETSEVRLELFRLIDIFLYQIMAWAARRWLAHTTVRGEEAARPRTYSDGSHSLPKTLFEKIWNRHVIEGDDEASLLLIDRILLHERTGGVALKSLAETGRKIATPSHVFVTMDHVVDTLPGRTDDTLMPTGRDFITTTRREALAAGLTIFDIDDPRQGIVHVISPEQGIVLPGLTLVCPDSHTCSQGALGALAWGIGSTEAEHALATGSLRVNRPATMRITVNGALQPGVTAKDLALHIIRRLGSSGAKGSAVEFAGSAVDDLEVEGRMTLCNMAAELAAFTAVIAPDQKTIAFLQDRPFAPKGEAWERAMRHWQDLRSDPAAEFDTEYTFDACEAVPMVTWGTSPDQAVPLVGSVPDVLAATGDEAEARARDYMNVMPGTAVSDLSITAAFIGSCTNSRLSDLRRAASVLKGRRIASHVRAICVPGSGQVKAAAESEGIDKLFRDAGFEWREPGCSMCFFAGGESFAAGDRVISSTNRNFERRQGPGTRTHLASPETVAASAVLGRIGGVADLPPLQRETDA

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
99 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
103 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
107 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
113 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
168 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
169 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
170 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
171 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
172 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
177 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
178 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
179 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
182 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
183 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
184 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
188 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
189 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
190 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
191 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
192 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
193 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
194 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
195 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
196 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
197 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
198 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
199 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
200 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
201 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
202 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
203 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
204 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
205 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
206 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
207 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule
208 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.29
Metatranscriptomes 0
Isolates 6.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.46
Nodule 0.91
Rhizoplane 4.88
Rhizosphere 66.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10011817 3300031731 Bacteria 4595
2 JGI24749J21850_1000120 3300002076 Bacteria 13208
3 JGI25165J46597_1000012 3300003214 Bacteria 421074
4 Ga0055534_1002648 3300003784 Bacteria 6072
5 Ga0065165_1007602 3300005262 Bacteria 5279
6 Ga0065704_10003064 3300005289 Bacteria 9589
7 Ga0065707_10004062 3300005295 Bacteria 5055
8 Ga0070676_10119403 3300005328 Bacteria 1653
9 Ga0070670_100074759 3300005331 Bacteria 2911
10 Ga0070668_100009176 3300005347 Bacteria 7336
11 Ga0070668_100012332 3300005347 Bacteria 6365
12 Ga0070669_100000030 3300005353 Bacteria 160753
13 Ga0070669_100003022 3300005353 Bacteria 12103
14 Ga0070671_100000550 3300005355 Bacteria 26544
15 Ga0070671_100095782 3300005355 Bacteria 2488
16 Ga0070667_100026301 3300005367 Bacteria 4839
17 Ga0070700_100039067 3300005441 Bacteria 2896
18 Ga0070678_100072360 3300005456 Bacteria 2584
19 Ga0070681_10075807 3300005458 Bacteria 3323
20 Ga0070672_100082338 3300005543 Bacteria 2582
21 Ga0070686_100078299 3300005544 Bacteria 2182
22 Ga0070665_100001419 3300005548 Bacteria 28085
23 Ga0070665_100001647 3300005548 Bacteria 25743
24 Ga0068854_100190341 3300005578 Bacteria 1607
25 Ga0068859_100000559 3300005617 Bacteria 36968
26 Ga0068859_100081671 3300005617 Bacteria 3275
27 Ga0068864_100005447 3300005618 Bacteria 10437
28 Ga0068861_100000003 3300005719 Bacteria 109394
29 Ga0068863_100009878 3300005841 Bacteria 9294
30 Ga0068863_100056320 3300005841 Bacteria 3722
31 Ga0068858_100110463 3300005842 Bacteria 2567
32 Ga0068860_100000075 3300005843 Bacteria 172873
33 Ga0068860_100007199 3300005843 Bacteria 11124
34 Ga0068862_100000022 3300005844 Bacteria 214075
35 Ga0075368_10000051 3300006042 Bacteria 28440
36 Ga0075364_10041127 3300006051 Bacteria 3000
37 Ga0075364_10046561 3300006051 Bacteria 2824
38 Ga0070716_100037372 3300006173 Bacteria 2683
39 Ga0075362_10000190 3300006177 Bacteria 17064
40 Ga0075367_10022648 3300006178 Bacteria 3526
41 Ga0075367_10043661 3300006178 Bacteria 2625
42 Ga0075369_10010196 3300006186 Bacteria 3672
43 Ga0075366_10005893 3300006195 Bacteria 6663
44 Ga0075366_10005908 3300006195 Bacteria 6656
45 Ga0075366_10013485 3300006195 Bacteria 4654
46 Ga0075366_10016440 3300006195 Bacteria 4253
47 Ga0068865_100089139 3300006881 Bacteria 2233
48 Ga0097620_100000559 3300006931 Bacteria 36968
49 Ga0097620_100081666 3300006931 Bacteria 3275
50 Ga0105251_10001957 3300009011 Bacteria 16840
51 Ga0105240_10106468 3300009093 Bacteria 3401
52 Ga0111539_10009753 3300009094 Bacteria 12117
53 Ga0105247_10034069 3300009101 Bacteria 3101
54 Ga0114129_10138785 3300009147 Bacteria 3334
55 Ga0105241_10234254 3300009174 Bacteria 1549
56 Ga0105248_10000080 3300009177 Bacteria 111519
57 Ga0105248_10000096 3300009177 Bacteria 97519
58 Ga0105248_10013627 3300009177 Bacteria 8949
59 Ga0105248_10106256 3300009177 Bacteria 3165
60 Ga0105248_10114179 3300009177 Bacteria 3046
61 Ga0105237_10165935 3300009545 Bacteria 2207
62 Ga0105239_10052791 3300010375 Bacteria 4458
63 Ga0163162_10069125 3300013306 Bacteria 3584
64 Ga0163163_10034883 3300014325 Bacteria 4877
65 Ga0163163_10138208 3300014325 Bacteria 2478
66 Ga0163161_10000418 3300017792 Bacteria 35697
67 Ga0163161_10030716 3300017792 Bacteria 3825
68 Ga0209233_1000058 3300025261 Bacteria 421872
69 Ga0209675_1000405 3300025291 Bacteria 35470
70 Ga0209050_1000140 3300025298 Bacteria 173241
71 Ga0207647_10016735 3300025904 Bacteria 4997
72 Ga0207645_10008342 3300025907 Bacteria 7234
73 Ga0207707_10144794 3300025912 Bacteria 2077
74 Ga0207695_10076414 3300025913 Bacteria 3405
75 Ga0207671_10085778 3300025914 Bacteria 2366
76 Ga0207652_10151642 3300025921 Bacteria 2075
77 Ga0207681_10000036 3300025923 Bacteria 161782
78 Ga0207681_10000328 3300025923 Bacteria 34223
79 Ga0207644_10000238 3300025931 Bacteria 37789
80 Ga0207644_10001729 3300025931 Bacteria 14122
81 Ga0207709_10087772 3300025935 Bacteria 2023
82 Ga0207665_10055893 3300025939 Bacteria 2664
83 Ga0207691_10055777 3300025940 Bacteria 3600
84 Ga0207711_10000566 3300025941 Bacteria 37693
85 Ga0207711_10004651 3300025941 Bacteria 11661
86 Ga0207711_10012989 3300025941 Bacteria 6918
87 Ga0207711_10200898 3300025941 Bacteria 1819
88 Ga0207668_10012826 3300025972 Bacteria 5142
89 Ga0207640_10040045 3300025981 Bacteria 2970
90 Ga0207640_10079790 3300025981 Bacteria 2232
91 Ga0207658_10003971 3300025986 Bacteria 10369
92 Ga0207703_10081834 3300026035 Bacteria 2693
93 Ga0207678_10061952 3300026067 Bacteria 3217
94 Ga0207708_10014124 3300026075 Bacteria 5969
95 Ga0207641_10000691 3300026088 Bacteria 36405
96 Ga0207676_10082763 3300026095 Bacteria 2612
97 Ga0207675_100000029 3300026118 Bacteria 109352
98 Ga0209813_10000302 3300027866 Bacteria 13520
99 Ga0268266_10000002 3300028379 Bacteria 3059047
100 Ga0268266_10000576 3300028379 Bacteria 50660
101 Ga0268265_10000006 3300028380 Bacteria 466482
102 Ga0268264_10000136 3300028381 Bacteria 177180
103 Ga0265331_10000037 3300031250 Bacteria 197251
104 Ga0265327_10059514 3300031251 Bacteria 1956
105 Ga0265314_10021764 3300031711 Bacteria 4922
106 Ga0316576_10044497 3300031727 Bacteria 3207
107 Ga0307407_10010874 3300031903 Bacteria 4310
108 Ga0307407_10011816 3300031903 Bacteria 4175
109 Ga0307412_10008982 3300031911 Bacteria 5726
110 Ga0307412_10026238 3300031911 Bacteria 3619
111 Ga0307412_10061838 3300031911 Bacteria 2519
112 Ga0307416_100123745 3300032002 Bacteria 2312
113 Ga0307414_10000149 3300032004 Bacteria 46922
114 Ga0307415_100031350 3300032126 Bacteria 3424
115 Ga0373924_0082798 3300035410 Bacteria 1366
116 Ga0373933_0055429 3300035724 Bacteria 2378
117 Ga0373937_0002662 3300036401 Bacteria 14886
118 Ga0395898_0002294 3300037466 Bacteria 22975
119 Ga0400483_228481 3300039062 Bacteria 10888
120 Ga0436365_0600371 3300039437 Bacteria 4526
121 Ga0436365_1550277 3300039437 Bacteria 2313
122 Ga0436361_0865470 3300039447 Bacteria 6004
123 Ga0439447_023079 3300041407 Bacteria 1624
124 Ga0451577_0003064 3300042876 Bacteria 18937
125 Ga0451577_0257817 3300042876 Bacteria 1579
126 Ga0451576_0015380 3300045051 Bacteria 8477
127 Ga0495627_000114 3300046453 Bacteria 100085
128 Ga0495627_000139 3300046453 Bacteria 86240
129 Ga0495627_000735 3300046453 Bacteria 24646
130 Ga0495627_004931 3300046453 Bacteria 5487
131 Ga0495650_0002785 3300046471 Bacteria 13444
132 Ga0495596_0000323 3300046500 Bacteria 31257
133 Ga0495607_0026126 3300046501 Bacteria 3625
134 Ga0495607_0026579 3300046501 Bacteria 3591
135 Ga0495610_0000019 3300046512 Bacteria 351524
136 Ga0495610_0000475 3300046512 Bacteria 41392
137 Ga0495610_0001079 3300046512 Bacteria 24974
138 Ga0495610_0005250 3300046512 Bacteria 9269
139 Ga0495610_0059186 3300046512 Bacteria 1830
140 Ga0495620_0003823 3300046515 Bacteria 8584
141 Ga0495632_0000006 3300046519 Bacteria 345883
142 Ga0495632_0002578 3300046519 Bacteria 13693
143 Ga0495632_0009393 3300046519 Bacteria 5900
144 Ga0495637_0009307 3300046520 Bacteria 4795
145 Ga0495637_0043806 3300046520 Bacteria 1908
146 Ga0495643_0000021 3300046522 Bacteria 293465
147 Ga0495643_0000565 3300046522 Bacteria 45833
148 Ga0495643_0004900 3300046522 Bacteria 9205
149 Ga0495643_0026482 3300046522 Bacteria 3272
150 Ga0495648_0005268 3300046524 Bacteria 10796
151 Ga0495648_0005343 3300046524 Bacteria 10705
152 Ga0495648_0025163 3300046524 Bacteria 4035
153 Ga0495648_0026154 3300046524 Bacteria 3933
154 Ga0495663_0000008 3300046525 Bacteria 260614
155 Ga0495633_0000502 3300046558 Bacteria 39407
156 Ga0495633_0000750 3300046558 Bacteria 29269
157 Ga0495668_0015832 3300046616 Bacteria 4394
158 Ga0495625_0001148 3300046660 Bacteria 34153
159 Ga0495671_0000017 3300046692 Bacteria 293465
160 Ga0495600_0137584 3300046809 Bacteria 1586
161 Ga0495679_031292 3300047446 Bacteria 1717
162 Ga0495681_0000003 3300047470 Bacteria 245567
163 Ga0495681_0002424 3300047470 Bacteria 13325
164 Ga0495686_0001568 3300047472 Bacteria 24312
165 Ga0495686_0002236 3300047472 Bacteria 18709
166 Ga0495686_0013199 3300047472 Bacteria 5745
167 Ga0495686_0055560 3300047472 Bacteria 2475
168 Ga0495626_0000758 3300048091 Bacteria 29809
169 Ga0496102_0169395 3300048905 Bacteria 2056
170 Ga0496103_0007242 3300048906 Bacteria 6613
171 Ga0496104_0032818 3300048907 Bacteria 4833
172 Ga0496108_0000697 3300048911 Bacteria 26063
173 Ga0496108_0018283 3300048911 Bacteria 5739
174 Ga0496108_0028475 3300048911 Bacteria 4623
175 Ga0496109_0004423 3300048912 Bacteria 11742
176 Ga0496109_0051940 3300048912 Bacteria 3735
177 Ga0496109_0058357 3300048912 Bacteria 3525
178 Ga0496110_0016215 3300048913 Bacteria 6215
179 Ga0496110_0077079 3300048913 Bacteria 2965
180 Ga0496111_0077542 3300048914 Bacteria 2423
181 Ga0496112_0020254 3300048915 Bacteria 6300
182 Ga0496112_0070445 3300048915 Bacteria 3456
183 Ga0496113_0003017 3300048916 Bacteria 9972
184 Ga0496113_0059647 3300048916 Bacteria 2875
185 Ga0496119_0007602 3300048922 Bacteria 9720
186 Ga0496121_0000069 3300048924 Bacteria 253087
187 Ga0496121_0000186 3300048924 Bacteria 138418
188 Ga0496121_0000359 3300048924 Bacteria 93676
189 Ga0496121_0000773 3300048924 Bacteria 58603
190 Ga0496121_0000953 3300048924 Bacteria 52360
191 Ga0496121_0005805 3300048924 Bacteria 15651
192 Ga0496121_0013225 3300048924 Bacteria 8893
193 Ga0496121_0071191 3300048924 Bacteria 2797
194 Ga0496123_0023380 3300048926 Bacteria 4731
195 Ga0496124_0001757 3300048927 Bacteria 30268
196 Ga0496124_0004808 3300048927 Bacteria 15551
197 Ga0496124_0030707 3300048927 Bacteria 4765
198 Ga0496125_0007124 3300048928 Bacteria 11935
199 Ga0496125_0018096 3300048928 Bacteria 6697
200 Ga0496125_0057202 3300048928 Bacteria 3160
201 Ga0496126_0003463 3300048929 Bacteria 19905
202 Ga0496126_0004653 3300048929 Bacteria 16225
203 Ga0496126_0006330 3300048929 Bacteria 13213
204 Ga0496126_0021677 3300048929 Bacteria 6271
205 Ga0496126_0021932 3300048929 Bacteria 6228
206 Ga0496126_0071507 3300048929 Bacteria 3088
207 Ga0496126_0075710 3300048929 Bacteria 2987
208 Ga0495678_037696 3300049459 Bacteria 1961
209 Ga0501031_0036428 3300049568 Bacteria 3209
210 Ga0501032_0002440 3300049569 Bacteria 14517
211 Ga0501032_0014048 3300049569 Bacteria 5680
212 Ga0501032_0133368 3300049569 Bacteria 1637
213 Ga0501033_0000530 3300049570 Bacteria 35795
214 Ga0501033_0005978 3300049570 Bacteria 9553
215 Ga0501034_0160660 3300049571 Bacteria 2218
216 Ga0501034_0341597 3300049571 Bacteria 1427
217 Ga0501036_0129762 3300049572 Bacteria 2128
218 Ga0501037_0000007 3300049573 Bacteria 215187
219 Ga0501038_0043888 3300049574 Bacteria 3887
220 Ga0501038_0049361 3300049574 Bacteria 3639
221 Ga0501038_0072983 3300049574 Bacteria 2907
222 Ga0501038_0131096 3300049574 Bacteria 2058
223 Ga0501043_0000034 3300049579 Bacteria 133724
224 Ga0501043_0004751 3300049579 Bacteria 11018
225 Ga0501047_0000800 3300049581 Bacteria 32887
226 Ga0501047_0034371 3300049581 Bacteria 4894
227 Ga0501047_0045347 3300049581 Bacteria 4251
228 Ga0501048_0080620 3300049582 Bacteria 2296
229 Ga0501068_0002608 3300049584 Bacteria 9547
230 Ga0501069_0000017 3300049585 Bacteria 141492
231 Ga0501070_0000177 3300049586 Bacteria 59246
232 Ga0501071_0010136 3300049587 Bacteria 6305
233 Ga0501073_0008607 3300049589 Bacteria 7562
234 Ga0501074_0000060 3300049590 Bacteria 54314
235 Ga0501074_0128708 3300049590 Bacteria 1812
236 Ga0501075_0006265 3300049591 Bacteria 8181
237 Ga0501076_0039294 3300049592 Bacteria 3715
238 Ga0501077_0031320 3300049593 Bacteria 3384
239 Ga0501079_0087567 3300049741 Bacteria 2411
240 Ga0501080_0000946 3300049742 Bacteria 23738
241 Ga0501083_0000226 3300049744 Bacteria 36285
242 Ga0501035_0000159 3300049822 Bacteria 82264
243 Ga0501035_0001139 3300049822 Bacteria 27801
244 Ga0501035_0004776 3300049822 Bacteria 12866
245 Ga0501044_0000010 3300049823 Bacteria 260121
246 Ga0501044_0018706 3300049823 Bacteria 7419
247 Ga0501044_0032532 3300049823 Bacteria 5482
248 Ga0501045_0002936 3300049824 Bacteria 11662
249 Ga0501045_0131360 3300049824 Bacteria 1861
250 nmdc:mga03683_1363_c1 3300050489 Bacteria 7245
251 nmdc:mga00v17_19158_c1 3300050491 Bacteria 3901
252 nmdc:mga00v17_42410_c1 3300050491 Bacteria 2737
253 nmdc:mga0yw44_18389_c1 3300050492 Bacteria 3826
254 nmdc:mga0k408_19970_c1 3300050493 Bacteria 3750
255 nmdc:mga0k408_5615_c1 3300050493 Bacteria 6665
256 nmdc:mga0k408_5829_c1 3300050493 Bacteria 6564
257 nmdc:mga06z11_212_c1 3300050494 Bacteria 23472
258 nmdc:mga06z11_22145_c1 3300050494 Bacteria 2964
259 nmdc:mga07m45_35_c1 3300050496 Bacteria 74486
260 nmdc:mga05p37_17377_c1 3300050507 Bacteria 8679
261 nmdc:mga08y16_6170_c1 3300050511 Bacteria 12577
262 nmdc:mga0rr50_17902_c1 3300050513 Bacteria 4746
263 Ga0500643_000661 3300053087 Bacteria 23082
264 Ga0500643_001150 3300053087 Bacteria 15797
265 Ga0500647_0013891 3300053091 Bacteria 3649
266 Ga0500651_0008791 3300053093 Bacteria 5970
267 Ga0500592_000011 3300053116 Bacteria 73738
268 Ga0500594_0001655 3300053118 Bacteria 4854
269 Ga0500607_000011 3300053121 Bacteria 110773
270 Ga0500607_001007 3300053121 Bacteria 26748
271 Ga0500608_000561 3300053122 Bacteria 13874
272 Ga0500618_000280 3300053125 Bacteria 39002
273 Ga0500655_000038 3300053133 Bacteria 37284
274 Ga0500559_0000998 3300053136 Bacteria 17601
275 Ga0500559_0001420 3300053136 Bacteria 13592
276 Ga0500559_0004380 3300053136 Bacteria 6723
277 Ga0500559_0009774 3300053136 Bacteria 4138
278 Ga0500564_000872 3300053138 Bacteria 9722
279 Ga0500577_0004677 3300053142 Bacteria 3639
280 Ga0500590_000664 3300053148 Bacteria 12343
281 Ga0500590_003190 3300053148 Bacteria 7497
282 Ga0500604_0000009 3300053151 Bacteria 112387
283 Ga0500622_0009779 3300053156 Bacteria 5293
284 Ga0500627_0000050 3300053158 Bacteria 56420
285 Ga0500567_000076 3300053723 Bacteria 22830
286 Ga0500570_000021 3300053724 Bacteria 41025
287 Ga0500625_000010 3300053729 Bacteria 154401
288 Ga0500645_001204 3300053730 Bacteria 13730
289 Ga0501082_0002439 3300060353 Bacteria 16314
290 Ga0501082_0029986 3300060353 Bacteria 4687
291 Ga0501082_0068985 3300060353 Bacteria 3044
292 Ga0501082_0073422 3300060353 Bacteria 2947
293 Ga0530510_0003890 3300061734 Bacteria 10297
294 2501079132 2501025502 Bacteria 9641094
295 2511093528 2510917013 Bacteria 9951648
296 2511126525 2510917021 Bacteria 5705459
297 2524613487 2524023250 Bacteria 5457705
298 2643731357 2643221541 Bacteria 5498788
299 2644042315 2643221606 Bacteria 5588032
300 2644394043 2643221671 Bacteria 5496681
301 2739649684 2739367664 Bacteria 4114334
302 2740028157 2739367865 Bacteria 4114482
303 2819554230 2818991438 Bacteria 5793701
304 2844322594 2844315083 Bacteria 8138177
305 2903734891 2903727486 Bacteria 8281579
306 2906604798 2906602504 Bacteria 8295279
307 2919140401 2919138771 Bacteria 5281312
308 2939632235 2939631187 Bacteria 6118131
309 2939636147 2939631187 Bacteria 6118131
310 2941487208 2941485952 Bacteria 3591484
311 3005602812 3005594810 Bacteria 8716512
312 3005725285 3005718088 Bacteria 8283608
313 8054305202 8054302542 Bacteria 5698134
314 8056976747 8056967851 Bacteria 9038162
315 8057102388 8057101203 Bacteria 5034064
316 Ga0307405_10011817
317 JGI24749J21850_1000120
318 JGI25165J46597_1000012
319 Ga0055534_1002648
320 Ga0065165_1007602
321 Ga0065704_10003064
322 Ga0065707_10004062
323 Ga0070676_10119403
324 Ga0070670_100074759
325 Ga0070668_100009176
326 Ga0070668_100012332
327 Ga0070669_100000030
328 Ga0070669_100003022
329 Ga0070671_100000550
330 Ga0070671_100095782
331 Ga0070667_100026301
332 Ga0070700_100039067
333 Ga0070678_100072360
334 Ga0070681_10075807
335 Ga0070672_100082338
336 Ga0070686_100078299
337 Ga0070665_100001419
338 Ga0070665_100001647
339 Ga0068854_100190341
340 Ga0068859_100000559
341 Ga0068859_100081671
342 Ga0068864_100005447
343 Ga0068861_100000003
344 Ga0068863_100009878
345 Ga0068863_100056320
346 Ga0068858_100110463
347 Ga0068860_100000075
348 Ga0068860_100007199
349 Ga0068862_100000022
350 Ga0075368_10000051
351 Ga0075364_10041127
352 Ga0075364_10046561
353 Ga0070716_100037372
354 Ga0075362_10000190
355 Ga0075367_10022648
356 Ga0075367_10043661
357 Ga0075369_10010196
358 Ga0075366_10005893
359 Ga0075366_10005908
360 Ga0075366_10013485
361 Ga0075366_10016440
362 Ga0068865_100089139
363 Ga0097620_100000559
364 Ga0097620_100081666
365 Ga0105251_10001957
366 Ga0105240_10106468
367 Ga0111539_10009753
368 Ga0105247_10034069
369 Ga0114129_10138785
370 Ga0105241_10234254
371 Ga0105248_10000080
372 Ga0105248_10000096
373 Ga0105248_10013627
374 Ga0105248_10106256
375 Ga0105248_10114179
376 Ga0105237_10165935
377 Ga0105239_10052791
378 Ga0163162_10069125
379 Ga0163163_10034883
380 Ga0163163_10138208
381 Ga0163161_10000418
382 Ga0163161_10030716
383 Ga0209233_1000058
384 Ga0209675_1000405
385 Ga0209050_1000140
386 Ga0207647_10016735
387 Ga0207645_10008342
388 Ga0207707_10144794
389 Ga0207695_10076414
390 Ga0207671_10085778
391 Ga0207652_10151642
392 Ga0207681_10000036
393 Ga0207681_10000328
394 Ga0207644_10000238
395 Ga0207644_10001729
396 Ga0207709_10087772
397 Ga0207665_10055893
398 Ga0207691_10055777
399 Ga0207711_10000566
400 Ga0207711_10004651
401 Ga0207711_10012989
402 Ga0207711_10200898
403 Ga0207668_10012826
404 Ga0207640_10040045
405 Ga0207640_10079790
406 Ga0207658_10003971
407 Ga0207703_10081834
408 Ga0207678_10061952
409 Ga0207708_10014124
410 Ga0207641_10000691
411 Ga0207676_10082763
412 Ga0207675_100000029
413 Ga0209813_10000302
414 Ga0268266_10000002
415 Ga0268266_10000576
416 Ga0268265_10000006
417 Ga0268264_10000136
418 Ga0265331_10000037
419 Ga0265327_10059514
420 Ga0265314_10021764
421 Ga0316576_10044497
422 Ga0307407_10010874
423 Ga0307407_10011816
424 Ga0307412_10008982
425 Ga0307412_10026238
426 Ga0307412_10061838
427 Ga0307416_100123745
428 Ga0307414_10000149
429 Ga0307415_100031350
430 Ga0373924_0082798
431 Ga0373933_0055429
432 Ga0373937_0002662
433 Ga0395898_0002294
434 Ga0400483_228481
435 Ga0436365_0600371
436 Ga0436365_1550277
437 Ga0436361_0865470
438 Ga0439447_023079
439 Ga0451577_0003064
440 Ga0451577_0257817
441 Ga0451576_0015380
442 Ga0495627_000114
443 Ga0495627_000139
444 Ga0495627_000735
445 Ga0495627_004931
446 Ga0495650_0002785
447 Ga0495596_0000323
448 Ga0495607_0026126
449 Ga0495607_0026579
450 Ga0495610_0000019
451 Ga0495610_0000475
452 Ga0495610_0001079
453 Ga0495610_0005250
454 Ga0495610_0059186
455 Ga0495620_0003823
456 Ga0495632_0000006
457 Ga0495632_0002578
458 Ga0495632_0009393
459 Ga0495637_0009307
460 Ga0495637_0043806
461 Ga0495643_0000021
462 Ga0495643_0000565
463 Ga0495643_0004900
464 Ga0495643_0026482
465 Ga0495648_0005268
466 Ga0495648_0005343
467 Ga0495648_0025163
468 Ga0495648_0026154
469 Ga0495663_0000008
470 Ga0495633_0000502
471 Ga0495633_0000750
472 Ga0495668_0015832
473 Ga0495625_0001148
474 Ga0495671_0000017
475 Ga0495600_0137584
476 Ga0495679_031292
477 Ga0495681_0000003
478 Ga0495681_0002424
479 Ga0495686_0001568
480 Ga0495686_0002236
481 Ga0495686_0013199
482 Ga0495686_0055560
483 Ga0495626_0000758
484 Ga0496102_0169395
485 Ga0496103_0007242
486 Ga0496104_0032818
487 Ga0496108_0000697
488 Ga0496108_0018283
489 Ga0496108_0028475
490 Ga0496109_0004423
491 Ga0496109_0051940
492 Ga0496109_0058357
493 Ga0496110_0016215
494 Ga0496110_0077079
495 Ga0496111_0077542
496 Ga0496112_0020254
497 Ga0496112_0070445
498 Ga0496113_0003017
499 Ga0496113_0059647
500 Ga0496119_0007602
501 Ga0496121_0000069
502 Ga0496121_0000186
503 Ga0496121_0000359
504 Ga0496121_0000773
505 Ga0496121_0000953
506 Ga0496121_0005805
507 Ga0496121_0013225
508 Ga0496121_0071191
509 Ga0496123_0023380
510 Ga0496124_0001757
511 Ga0496124_0004808
512 Ga0496124_0030707
513 Ga0496125_0007124
514 Ga0496125_0018096
515 Ga0496125_0057202
516 Ga0496126_0003463
517 Ga0496126_0004653
518 Ga0496126_0006330
519 Ga0496126_0021677
520 Ga0496126_0021932
521 Ga0496126_0071507
522 Ga0496126_0075710
523 Ga0495678_037696
524 Ga0501031_0036428
525 Ga0501032_0002440
526 Ga0501032_0014048
527 Ga0501032_0133368
528 Ga0501033_0000530
529 Ga0501033_0005978
530 Ga0501034_0160660
531 Ga0501034_0341597
532 Ga0501036_0129762
533 Ga0501037_0000007
534 Ga0501038_0043888
535 Ga0501038_0049361
536 Ga0501038_0072983
537 Ga0501038_0131096
538 Ga0501043_0000034
539 Ga0501043_0004751
540 Ga0501047_0000800
541 Ga0501047_0034371
542 Ga0501047_0045347
543 Ga0501048_0080620
544 Ga0501068_0002608
545 Ga0501069_0000017
546 Ga0501070_0000177
547 Ga0501071_0010136
548 Ga0501073_0008607
549 Ga0501074_0000060
550 Ga0501074_0128708
551 Ga0501075_0006265
552 Ga0501076_0039294
553 Ga0501077_0031320
554 Ga0501079_0087567
555 Ga0501080_0000946
556 Ga0501083_0000226
557 Ga0501035_0000159
558 Ga0501035_0001139
559 Ga0501035_0004776
560 Ga0501044_0000010
561 Ga0501044_0018706
562 Ga0501044_0032532
563 Ga0501045_0002936
564 Ga0501045_0131360
565 nmdc:mga03683_1363_c1
566 nmdc:mga00v17_19158_c1
567 nmdc:mga00v17_42410_c1
568 nmdc:mga0yw44_18389_c1
569 nmdc:mga0k408_19970_c1
570 nmdc:mga0k408_5615_c1
571 nmdc:mga0k408_5829_c1
572 nmdc:mga06z11_212_c1
573 nmdc:mga06z11_22145_c1
574 nmdc:mga07m45_35_c1
575 nmdc:mga05p37_17377_c1
576 nmdc:mga08y16_6170_c1
577 nmdc:mga0rr50_17902_c1
578 Ga0500643_000661
579 Ga0500643_001150
580 Ga0500647_0013891
581 Ga0500651_0008791
582 Ga0500592_000011
583 Ga0500594_0001655
584 Ga0500607_000011
585 Ga0500607_001007
586 Ga0500608_000561
587 Ga0500618_000280
588 Ga0500655_000038
589 Ga0500559_0000998
590 Ga0500559_0001420
591 Ga0500559_0004380
592 Ga0500559_0009774
593 Ga0500564_000872
594 Ga0500577_0004677
595 Ga0500590_000664
596 Ga0500590_003190
597 Ga0500604_0000009
598 Ga0500622_0009779
599 Ga0500627_0000050
600 Ga0500567_000076
601 Ga0500570_000021
602 Ga0500625_000010
603 Ga0500645_001204
604 Ga0501082_0002439
605 Ga0501082_0029986
606 Ga0501082_0068985
607 Ga0501082_0073422
608 Ga0530510_0003890
609 2501079132
610 2511093528
611 2511126525
612 2524613487
613 2643731357
614 2644042315
615 2644394043
616 2739649684
617 2740028157
618 2819554230
619 2844322594
620 2903734891
621 2906604798
622 2919140401
623 2939632235
624 2939636147
625 2941487208
626 3005602812
627 3005725285
628 8054305202
629 8056976747
630 8057102388

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00330

Aconitase

Aconitase family (aconitate hydratase)

72

519

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9162 6 464
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9098 6 464
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8656 6 468
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8597 6 468
4nqy-assembly1.cif.gz_A the reduced form of mj0499 0.8551 6 467
ID Description Score Start End Superfamily
af_O14289_10_298_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9716 7 290 3.30.499.10
af_O14289_10_298_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9519 7 290 3.30.499.10
af_Q9UT74_348_492_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.947 341 464 3.30.499.10
af_P0A6A6_327_466_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9462 332 469 3.30.499.10
af_O14289_312_505_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9456 305 470 3.30.499.10
ID Description Score Start End GO Terms
AF-A0A6N9VBJ5-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9914 162 242 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-A0A520I5N5-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9912 6 265 GO:0009098
GO:0016829
GO:0046872
GO:0051539
AF-A0A3A0UM45-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9908 83 228 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-A0A7Y0X4E5-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9886 92 253 GO:0003861
GO:0009098
GO:0046872
GO:0051539
AF-A0A3C0BZ21-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9884 6 196 GO:0009098
GO:0016829
GO:0046872
GO:0051539

Map