F409365

General Info

Members Datasets Scaffolds Average Seq Length
328 209 657 290

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0000148|Ga0453683_0000148_12523_13503
Length 326
Sequence MPLCGQNVEFCFENPDIEKLLSLAPVNLKLQRMKAYVFPGQGAQFPGMGKDLYEKSPLAKELFEKANDILGFRITDIMFEGTEEDLKQTKVTQPAIFLHSVLLAKTLENFQPEMVAGHSLGEFSALVANGALSFEDGLRLVSKRAQAMQKACEIEPSTMAAIVGCEDEVVEEVCASIDEVVVPANYNCPGQLVISGSIAGIDKACAELTARGAKRALKLVVGGAFHSPLMEPAREELAAAIEATPFSTPVCPIYQNVNAAPTADPAVIKQNLIAQLTAPVKWTQTAKNMIADGATLFTEIGPGKVLQGLIKKVEKTAEVAGVQSFE

Samples

Sample ID Description Type Environment
1 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
13 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
32 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
73 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
77 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
101 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
102 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
103 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
104 3300041508 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaT Metatranscriptome Unclassified
105 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
106 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
113 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
114 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
117 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
144 3300049657 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought Metagenome Rhizosphere
145 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
146 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
147 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
148 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
149 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
161 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
163 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
164 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
165 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
166 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
167 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
168 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
169 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
170 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
171 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
172 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
173 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
174 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
175 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
176 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
177 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
178 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
179 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
180 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
181 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
182 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
183 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
184 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
185 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
186 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
187 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
188 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
189 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
190 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
191 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
192 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
193 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
194 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
195 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
196 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
197 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
198 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
199 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
200 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
201 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
202 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
203 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
204 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
205 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
206 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
207 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
208 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
209 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.84
Metatranscriptomes 1.52
Isolates 14.63

Biome Distribution

Category Percentage (%)
Aerial Root 0.61
Bulb 0
Endosphere 6.1
Nodule 0.91
Rhizoplane 1.22
Rhizosphere 72.26
Stem 0
Stem Tuber 0
Unclassified 2.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453683_0000148 3300044673 Bacteria 103686
2 JGI24735J21928_10004955 3300002067 Bacteria 4438
3 JGI25162J39368_1000964 3300002737 Bacteria 18324
4 JGI25157J39369_1002704 3300002741 Bacteria 4111
5 rootH1_10019234 3300003316 Bacteria 23179
6 rootH1_10107714 3300003316 Bacteria 3405
7 rootH2_10002905 3300003320 Bacteria 36151
8 rootH2_10019248 3300003320 Bacteria 4140
9 rootH2_10095288 3300003320 Bacteria 3413
10 rootH2_10141477 3300003320 Bacteria 5929
11 rootH2_10198393 3300003320 Bacteria 2000
12 rootL2_10017166 3300003322 Bacteria 5767
13 rootL2_10091374 3300003322 Bacteria 7425
14 rootL2_10094033 3300003322 Bacteria 6080
15 rootL2_10171436 3300003322 Bacteria 4725
16 rootL2_10180126 3300003322 Bacteria 2824
17 rootL2_10276523 3300003322 Bacteria 3056
18 rootL2_10315846 3300003322 Bacteria 3149
19 rootL2_10351842 3300003322 Bacteria 1274
20 rootH1_10029390 3300003316 Bacteria 4608
21 rootH1_10029390 3300003323 Bacteria 24130
22 rootH1_10075776 3300003323 Bacteria 5117
23 rootH1_10144207 3300003323 Bacteria 8412
24 Ga0055534_1006134 3300003784 Bacteria 3086
25 Ga0055531_10000015 3300003794 Bacteria 182104
26 Ga0058863_11920979 3300004799 Bacteria 3023
27 Ga0058860_11850861 3300004801 Bacteria 3137
28 Ga0058862_12833523 3300004803 Bacteria 2412
29 Ga0065165_1000572 3300005262 Bacteria 54513
30 Ga0065165_1014484 3300005262 Unclassified 3059
31 Ga0065704_10071846 3300005289 Bacteria 9773
32 Ga0065704_10072350 3300005289 Bacteria 8688
33 Ga0065715_10128554 3300005293 Bacteria 2015
34 Ga0070658_10086539 3300005327 Bacteria 2578
35 Ga0070683_100016364 3300005329 Bacteria 6540
36 Ga0070682_100000437 3300005337 Bacteria 26936
37 Ga0070671_100011532 3300005355 Bacteria 7107
38 Ga0070659_100040361 3300005366 Bacteria 3646
39 Ga0070713_100078458 3300005436 Bacteria 2811
40 Ga0070662_100045168 3300005457 Bacteria 3159
41 Ga0070679_100006243 3300005530 Bacteria 11102
42 Ga0070684_100069450 3300005535 Bacteria 3098
43 Ga0068855_100091183 3300005563 Bacteria 3516
44 Ga0068857_100064608 3300005577 Bacteria 3254
45 Ga0081455_10199477 3300005937 Bacteria 1499
46 Ga0075430_100082739 3300006846 Bacteria 2690
47 Ga0075429_100066548 3300006880 Bacteria 3137
48 Ga0079104_1000126 3300006946 Bacteria 109126
49 Ga0105244_10000005 3300009036 Bacteria 481412
50 Ga0105240_10000098 3300009093 Bacteria 178435
51 Ga0105240_10000158 3300009093 Bacteria 139180
52 Ga0111539_10087450 3300009094 Unclassified 3661
53 Ga0105243_10000216 3300009148 Bacteria 67300
54 Ga0105241_10004211 3300009174 Bacteria 10624
55 Ga0105237_10000206 3300009545 Bacteria 84005
56 Ga0105239_10000008 3300010375 Bacteria 376925
57 Ga0105239_10000428 3300010375 Bacteria 61391
58 Ga0105239_10777591 3300010375 Bacteria 1096
59 Ga0157373_10000032 3300013100 Bacteria 126310
60 Ga0157373_10000327 3300013100 Bacteria 38493
61 Ga0157373_10000486 3300013100 Bacteria 31473
62 Ga0157371_10001401 3300013102 Bacteria 25151
63 Ga0157371_10030772 3300013102 Bacteria 3869
64 Ga0157371_10051839 3300013102 Bacteria 2915
65 Ga0157370_10013903 3300013104 Bacteria 8265
66 Ga0157370_10020131 3300013104 Bacteria 6670
67 Ga0157370_10038070 3300013104 Bacteria 4655
68 Ga0157370_10285993 3300013104 Bacteria 1523
69 Ga0157372_10000199 3300013307 Bacteria 66101
70 Ga0157372_10000980 3300013307 Bacteria 31160
71 Ga0157372_10007865 3300013307 Bacteria 11331
72 Ga0157375_10000227 3300013308 Bacteria 52292
73 Ga0157380_10408676 3300014326 Bacteria 1290
74 Ga0182008_10000003 3300014497 Bacteria 456880
75 Ga0182006_1000001 3300015261 Bacteria 1091090
76 Ga0163161_10020399 3300017792 Bacteria 4651
77 Ga0209026_1000246 3300025250 Bacteria 69164
78 Ga0209026_1001159 3300025250 Bacteria 12323
79 Ga0209026_1003618 3300025250 Bacteria 4967
80 Ga0209233_1002603 3300025261 Bacteria 6554
81 Ga0209675_1000115 3300025291 Bacteria 111981
82 Ga0209676_1000587 3300025292 Bacteria 54532
83 Ga0209050_1002149 3300025298 Bacteria 17945
84 Ga0209257_1000005 3300025304 Bacteria 1592528
85 Ga0207655_1000016 3300025728 Bacteria 551476
86 Ga0207647_10000103 3300025904 Bacteria 65792
87 Ga0207705_10049489 3300025909 Bacteria 3024
88 Ga0207707_10048152 3300025912 Bacteria 3713
89 Ga0207695_10000235 3300025913 Bacteria 146984
90 Ga0207671_10000316 3300025914 Bacteria 71241
91 Ga0207652_10004777 3300025921 Bacteria 10982
92 Ga0207700_10262624 3300025928 Bacteria 1479
93 Ga0207644_10003140 3300025931 Bacteria 10640
94 Ga0207690_10004182 3300025932 Bacteria 8526
95 Ga0207706_10108611 3300025933 Bacteria 2441
96 Ga0207709_10000084 3300025935 Bacteria 161002
97 Ga0207665_10070333 3300025939 Bacteria 2388
98 Ga0207661_10010982 3300025944 Bacteria 6541
99 Ga0207667_10002927 3300025949 Bacteria 21197
100 Ga0207667_10187824 3300025949 Bacteria 2121
101 Ga0207640_10165173 3300025981 Bacteria 1643
102 Ga0207678_10291910 3300026067 Bacteria 1400
103 Ga0207683_10188792 3300026121 Bacteria 1870
104 Ga0209281_1000207 3300027111 Bacteria 132470
105 Ga0209995_1006417 3300027471 Bacteria 1891
106 Ga0209968_1010618 3300027526 Bacteria 1417
107 Ga0207428_10185679 3300027907 Bacteria 1569
108 Ga0265337_1036041 3300028556 Bacteria 1446
109 Ga0265323_10007239 3300028653 Bacteria 4624
110 Ga0307515_10000003 3300028794 Bacteria 891317
111 Ga0265327_10000022 3300031251 Bacteria 402724
112 Ga0265327_10012746 3300031251 Bacteria 5644
113 Ga0265327_10064090 3300031251 Bacteria 1864
114 Ga0265327_10090425 3300031251 Bacteria 1494
115 Ga0265316_10000582 3300031344 Bacteria 40889
116 Ga0265316_10189312 3300031344 Bacteria 1529
117 Ga0307513_10015284 3300031456 Bacteria 9313
118 Ga0307513_10327717 3300031456 Bacteria 1287
119 Ga0307509_10039605 3300031507 Bacteria 5133
120 Ga0307408_100001640 3300031548 Bacteria 16504
121 Ga0307408_100243188 3300031548 Bacteria 1480
122 Ga0307514_10065073 3300031649 Bacteria 2763
123 Ga0316576_10022806 3300031727 Bacteria 4353
124 Ga0316576_10157270 3300031727 Bacteria 1713
125 Ga0316576_10245953 3300031727 Bacteria 1343
126 Ga0316576_10263917 3300031727 Bacteria 1292
127 Ga0316578_10031983 3300031728 Bacteria 3002
128 Ga0307405_10283951 3300031731 Bacteria 1247
129 Ga0316577_10014460 3300031733 Unclassified 4332
130 Ga0307406_10053866 3300031901 Bacteria 2565
131 Ga0307407_10187971 3300031903 Bacteria 1374
132 Ga0307412_10000027 3300031911 Bacteria 214663
133 Ga0307412_10000386 3300031911 Bacteria 27395
134 Ga0307416_100000006 3300032002 Bacteria 466074
135 Ga0307416_100000196 3300032002 Bacteria 32009
136 Ga0307414_10000030 3300032004 Bacteria 187373
137 Ga0307414_10004576 3300032004 Bacteria 7526
138 Ga0307414_10029090 3300032004 Bacteria 3592
139 Ga0307414_10042961 3300032004 Bacteria 3075
140 Ga0307414_10054776 3300032004 Bacteria 2789
141 Ga0307415_100029953 3300032126 Bacteria 3486
142 Ga0316585_10004179 3300032137 Bacteria 4012
143 Ga0316574_0069161 3300035398 Bacteria 2228
144 Ga0373927_0114236 3300035695 Unclassified 1760
145 Ga0316584_0041646 3300036712 Bacteria 3423
146 Ga0316584_0245011 3300036712 Unclassified 1311
147 Ga0316584_0281647 3300036712 Bacteria 1208
148 Ga0316584_0327907 3300036712 Bacteria 1103
149 Ga0395901_0027692 3300038443 Bacteria 5827
150 Ga0400483_287466 3300039062 Bacteria 1281
151 Ga0400489_08956 3300039093 Bacteria 2908
152 Ga0400489_35883 3300039093 Unclassified 2304
153 Ga0400489_53646 3300039093 Bacteria 3195
154 Ga0439465_0000068 3300041413 Bacteria 22632
155 Ga0451795_1275940 3300041456 Bacteria 3230
156 Ga0451852_41799 3300041508 Bacteria 918
157 Ga0451855_0008677 3300041511 Bacteria 2859
158 Ga0451855_0235669 3300041511 Bacteria 1421
159 Ga0439445_0011464 3300042004 Bacteria 2115
160 Ga0451577_0000022 3300042876 Bacteria 437063
161 Ga0451577_0000061 3300042876 Bacteria 268366
162 Ga0451577_0000156 3300042876 Bacteria 151954
163 Ga0451577_0002787 3300042876 Bacteria 20180
164 Ga0451577_0005746 3300042876 Bacteria 12578
165 Ga0451577_0059617 3300042876 Bacteria 3403
166 Ga0451577_0062469 3300042876 Bacteria 3322
167 Ga0451577_0154051 3300042876 Bacteria 2068
168 Ga0453683_0000358 3300044673 Bacteria 55077
169 Ga0453683_0009216 3300044673 Bacteria 6594
170 Ga0453683_0046038 3300044673 Bacteria 2735
171 Ga0453683_0118648 3300044673 Bacteria 1665
172 Ga0453683_0169751 3300044673 Bacteria 1381
173 Ga0453684_0000148 3300044712 Bacteria 308453
174 Ga0453684_0000607 3300044712 Bacteria 131953
175 Ga0453684_0000706 3300044712 Bacteria 118423
176 Ga0453684_0001448 3300044712 Bacteria 67464
177 Ga0453684_0001680 3300044712 Bacteria 59882
178 Ga0453684_0003019 3300044712 Bacteria 39134
179 Ga0453684_0005549 3300044712 Bacteria 24899
180 Ga0453684_0007194 3300044712 Bacteria 20652
181 Ga0453684_0008080 3300044712 Bacteria 19018
182 Ga0453684_0009587 3300044712 Bacteria 16892
183 Ga0453684_0010401 3300044712 Bacteria 15921
184 Ga0453684_0011516 3300044712 Bacteria 14810
185 Ga0453684_0011787 3300044712 Bacteria 14570
186 Ga0453684_0016088 3300044712 Bacteria 11739
187 Ga0453684_0021689 3300044712 Bacteria 9578
188 Ga0453684_0035471 3300044712 Bacteria 6891
189 Ga0453684_0035612 3300044712 Bacteria 6876
190 Ga0453684_0049065 3300044712 Bacteria 5572
191 Ga0453684_0054120 3300044712 Bacteria 5231
192 Ga0453684_0063107 3300044712 Bacteria 4742
193 Ga0453684_0108348 3300044712 Unclassified 3381
194 Ga0453684_0110428 3300044712 Bacteria 3342
195 Ga0453684_0187816 3300044712 Bacteria 2420
196 Ga0453684_0215148 3300044712 Bacteria 2230
197 Ga0453684_0230799 3300044712 Bacteria 2137
198 Ga0453684_0404519 3300044712 Bacteria 1528
199 Ga0451576_0000020 3300045051 Bacteria 529568
200 Ga0451576_0000044 3300045051 Bacteria 334467
201 Ga0451576_0000083 3300045051 Bacteria 236908
202 Ga0451576_0001670 3300045051 Bacteria 36825
203 Ga0451576_0003086 3300045051 Bacteria 23369
204 Ga0451576_0004814 3300045051 Bacteria 17291
205 Ga0451576_0025436 3300045051 Bacteria 6376
206 Ga0451576_0150476 3300045051 Bacteria 2427
207 Ga0451576_0260757 3300045051 Bacteria 1812
208 Ga0451576_0309616 3300045051 Bacteria 1652
209 Ga0451576_0644076 3300045051 Bacteria 1113
210 Ga0495638_0000006 3300046460 Bacteria 668846
211 Ga0495638_0062085 3300046460 Bacteria 2307
212 Ga0495596_0000765 3300046500 Bacteria 19601
213 Ga0495606_0008337 3300046507 Bacteria 9027
214 Ga0495606_0028111 3300046507 Bacteria 3972
215 Ga0495606_0114327 3300046507 Bacteria 1624
216 Ga0495610_0000005 3300046512 Bacteria 924111
217 Ga0495618_0278924 3300046514 Unclassified 1043
218 Ga0495632_0003875 3300046519 Bacteria 10402
219 Ga0495643_0038448 3300046522 Bacteria 2621
220 Ga0495643_0057294 3300046522 Bacteria 2077
221 Ga0495663_0000093 3300046525 Bacteria 39511
222 Ga0495654_0000003 3300046530 Bacteria 863485
223 Ga0495609_0000003 3300046538 Bacteria 711547
224 Ga0495633_0000001 3300046558 Bacteria 801972
225 Ga0495633_0000285 3300046558 Bacteria 58070
226 Ga0495625_0000096 3300046660 Bacteria 142609
227 Ga0495625_0047308 3300046660 Bacteria 3102
228 Ga0495687_007696 3300047443 Bacteria 6290
229 Ga0495686_0000069 3300047472 Bacteria 217778
230 Ga0495686_0000306 3300047472 Bacteria 83341
231 Ga0495686_0002485 3300047472 Bacteria 17360
232 Ga0496102_0052882 3300048905 Bacteria 3702
233 Ga0496103_0031743 3300048906 Bacteria 3221
234 Ga0496113_0019078 3300048916 Bacteria 4791
235 Ga0496116_0000029 3300048919 Bacteria 422187
236 Ga0496117_0000007 3300048920 Bacteria 720505
237 Ga0496118_0000104 3300048921 Bacteria 157435
238 Ga0496119_0000007 3300048922 Bacteria 475920
239 Ga0496121_0086418 3300048924 Bacteria 2465
240 Ga0496122_0000222 3300048925 Bacteria 126693
241 Ga0496122_0000393 3300048925 Bacteria 92954
242 Ga0496122_0000964 3300048925 Bacteria 51617
243 Ga0496122_0004977 3300048925 Bacteria 16070
244 Ga0496123_0001611 3300048926 Bacteria 30555
245 Ga0496123_0064480 3300048926 Bacteria 2334
246 Ga0496123_0082952 3300048926 Bacteria 1940
247 Ga0496124_0006298 3300048927 Bacteria 12963
248 Ga0496125_0003111 3300048928 Bacteria 20658
249 Ga0496125_0108848 3300048928 Bacteria 2014
250 Ga0496126_0001962 3300048929 Bacteria 29153
251 Ga0501032_0006605 3300049569 Bacteria 8520
252 Ga0501032_0010004 3300049569 Bacteria 6849
253 Ga0501033_0000004 3300049570 Bacteria 441310
254 Ga0501034_0001514 3300049571 Bacteria 30518
255 Ga0501038_0007006 3300049574 Bacteria 10410
256 Ga0501038_0065228 3300049574 Bacteria 3103
257 Ga0501039_0014623 3300049575 Bacteria 6007
258 Ga0501043_0014385 3300049579 Bacteria 6195
259 Ga0501207_020443 3300049654 Bacteria 1057
260 Ga0501210_000533 3300049657 Bacteria 1836
261 Ga0501223_042235 3300049663 Bacteria 885
262 Ga0501257_007449 3300049686 Bacteria 2446
263 Ga0501241_000002 3300049758 Bacteria 194532
264 Ga0501264_000722 3300049761 Bacteria 4451
265 Ga0501269_000040 3300049766 Bacteria 39889
266 Ga0501035_0034936 3300049822 Bacteria 4566
267 Ga0501035_0076162 3300049822 Bacteria 2967
268 Ga0501044_0001251 3300049823 Bacteria 30146
269 nmdc:mga0k408_39084_c1 3300050493 Bacteria 2725
270 nmdc:mga0k408_71269_c1 3300050493 Bacteria 2028
271 nmdc:mga07m45_125907_c1 3300050496 Bacteria 1481
272 nmdc:mga0qj67_263060_c1 3300050509 Bacteria 1399
273 nmdc:mga08y16_42972_c1 3300050511 Bacteria 4734
274 Ga0500635_0002410 3300053080 Bacteria 4631
275 Ga0500559_0112085 3300053136 Bacteria 1264
276 Ga0500604_0019769 3300053151 Bacteria 1889
277 Ga0500616_0000082 3300053153 Bacteria 198665
278 Ga0500616_0008794 3300053153 Bacteria 6216
279 Ga0500622_0000010 3300053156 Bacteria 398804
280 Ga0500622_0000044 3300053156 Bacteria 158778
281 Ga0587111_0019600 3300060346 Unclassified 1285
282 2522553574 2522125168 Bacteria 7376607
283 2585140972 2582581278 Bacteria 5296881
284 2585425980 2582581873 Bacteria 3032664
285 2587677142 2585428045 Bacteria 5203023
286 2587746316 2585428060 Bacteria 5304711
287 2587753793 2585428061 Bacteria 3939663
288 2587865040 2585428095 Bacteria 3789702
289 2587945241 2585428115 Bacteria 4420269
290 2588211405 2585428182 Bacteria 5007281
291 2588215782 2585428183 Bacteria 5166119
292 2588219181 2585428184 Bacteria 4978681
293 2588224681 2585428185 Bacteria 4969476
294 2588234538 2585428187 Bacteria 4629388
295 2588447474 2588253712 Bacteria 5403181
296 2590603102 2588254255 Bacteria 5014294
297 2590610107 2588254257 Bacteria 5436094
298 2644643284 2643221716 Bacteria 4986332
299 2729200874 2728369107 Bacteria 5082720
300 2738698442 2738541273 Bacteria 4048577
301 2739252768 2738543014 Bacteria 4048139
302 2740060333 2739367874 Bacteria 4872888
303 2753674116 2751185877 Bacteria 4921427
304 2765575582 2765235839 Bacteria 5314748
305 2772605949 2772190705 Bacteria 4666226
306 2775674406 2775506739 Bacteria 3855222
307 2816875435 2816332188 Bacteria 5133218
308 2842086164 2842083920 Bacteria 4857652
309 2852627101 2852623160 Bacteria 4376875
310 2871723507 2871720351 Bacteria 4862476
311 2884637176 2884634485 Bacteria 3928637
312 2884935165 2884933994 Bacteria 4535041
313 2889293906 2889290771 Bacteria 5530962
314 2904559575 2904555929 Bacteria 5218588
315 2905999072 2905999023 Bacteria 4591259
316 2910249031 2910245624 Bacteria 6935613
317 2911139727 2911138879 Bacteria 5811561
318 2919098022 2919097161 Bacteria 3860339
319 2919403284 2919399522 Bacteria 5164947
320 2919439400 2919437846 Bacteria 6199444
321 2919694260 2919692658 Bacteria 5943958
322 2945924861 2945924605 Bacteria 4296724
323 2946023999 2946019816 Bacteria 4621265
324 2977243619 2977243572 Bacteria 4374394
325 2984574385 2984572630 Bacteria 4186940
326 2984607834 2984606641 Bacteria 4186971
327 2993375173 2993372514 Bacteria 4214139
328 2993482026 2993480792 Bacteria 4022225
329 8036738907 8036736890 Bacteria 2944828
330 Ga0453683_0000148
331 JGI24735J21928_10004955
332 JGI25162J39368_1000964
333 JGI25157J39369_1002704
334 rootH1_10019234
335 rootH1_10107714
336 rootH2_10002905
337 rootH2_10019248
338 rootH2_10095288
339 rootH2_10141477
340 rootH2_10198393
341 rootL2_10017166
342 rootL2_10091374
343 rootL2_10094033
344 rootL2_10171436
345 rootL2_10180126
346 rootL2_10276523
347 rootL2_10315846
348 rootL2_10351842
349 rootH1_10029390
350 rootH1_10075776
351 rootH1_10144207
352 Ga0055534_1006134
353 Ga0055531_10000015
354 Ga0058863_11920979
355 Ga0058860_11850861
356 Ga0058862_12833523
357 Ga0065165_1000572
358 Ga0065165_1014484
359 Ga0065704_10071846
360 Ga0065704_10072350
361 Ga0065715_10128554
362 Ga0070658_10086539
363 Ga0070683_100016364
364 Ga0070682_100000437
365 Ga0070671_100011532
366 Ga0070659_100040361
367 Ga0070713_100078458
368 Ga0070662_100045168
369 Ga0070679_100006243
370 Ga0070684_100069450
371 Ga0068855_100091183
372 Ga0068857_100064608
373 Ga0081455_10199477
374 Ga0075430_100082739
375 Ga0075429_100066548
376 Ga0079104_1000126
377 Ga0105244_10000005
378 Ga0105240_10000098
379 Ga0105240_10000158
380 Ga0111539_10087450
381 Ga0105243_10000216
382 Ga0105241_10004211
383 Ga0105237_10000206
384 Ga0105239_10000008
385 Ga0105239_10000428
386 Ga0105239_10777591
387 Ga0157373_10000032
388 Ga0157373_10000327
389 Ga0157373_10000486
390 Ga0157371_10001401
391 Ga0157371_10030772
392 Ga0157371_10051839
393 Ga0157370_10013903
394 Ga0157370_10020131
395 Ga0157370_10038070
396 Ga0157370_10285993
397 Ga0157372_10000199
398 Ga0157372_10000980
399 Ga0157372_10007865
400 Ga0157375_10000227
401 Ga0157380_10408676
402 Ga0182008_10000003
403 Ga0182006_1000001
404 Ga0163161_10020399
405 Ga0209026_1000246
406 Ga0209026_1001159
407 Ga0209026_1003618
408 Ga0209233_1002603
409 Ga0209675_1000115
410 Ga0209676_1000587
411 Ga0209050_1002149
412 Ga0209257_1000005
413 Ga0207655_1000016
414 Ga0207647_10000103
415 Ga0207705_10049489
416 Ga0207707_10048152
417 Ga0207695_10000235
418 Ga0207671_10000316
419 Ga0207652_10004777
420 Ga0207700_10262624
421 Ga0207644_10003140
422 Ga0207690_10004182
423 Ga0207706_10108611
424 Ga0207709_10000084
425 Ga0207665_10070333
426 Ga0207661_10010982
427 Ga0207667_10002927
428 Ga0207667_10187824
429 Ga0207640_10165173
430 Ga0207678_10291910
431 Ga0207683_10188792
432 Ga0209281_1000207
433 Ga0209995_1006417
434 Ga0209968_1010618
435 Ga0207428_10185679
436 Ga0265337_1036041
437 Ga0265323_10007239
438 Ga0307515_10000003
439 Ga0265327_10000022
440 Ga0265327_10012746
441 Ga0265327_10064090
442 Ga0265327_10090425
443 Ga0265316_10000582
444 Ga0265316_10189312
445 Ga0307513_10015284
446 Ga0307513_10327717
447 Ga0307509_10039605
448 Ga0307408_100001640
449 Ga0307408_100243188
450 Ga0307514_10065073
451 Ga0316576_10022806
452 Ga0316576_10157270
453 Ga0316576_10245953
454 Ga0316576_10263917
455 Ga0316578_10031983
456 Ga0307405_10283951
457 Ga0316577_10014460
458 Ga0307406_10053866
459 Ga0307407_10187971
460 Ga0307412_10000027
461 Ga0307412_10000386
462 Ga0307416_100000006
463 Ga0307416_100000196
464 Ga0307414_10000030
465 Ga0307414_10004576
466 Ga0307414_10029090
467 Ga0307414_10042961
468 Ga0307414_10054776
469 Ga0307415_100029953
470 Ga0316585_10004179
471 Ga0316574_0069161
472 Ga0373927_0114236
473 Ga0316584_0041646
474 Ga0316584_0245011
475 Ga0316584_0281647
476 Ga0316584_0327907
477 Ga0395901_0027692
478 Ga0400483_287466
479 Ga0400489_08956
480 Ga0400489_35883
481 Ga0400489_53646
482 Ga0439465_0000068
483 Ga0451795_1275940
484 Ga0451852_41799
485 Ga0451855_0008677
486 Ga0451855_0235669
487 Ga0439445_0011464
488 Ga0451577_0000022
489 Ga0451577_0000061
490 Ga0451577_0000156
491 Ga0451577_0002787
492 Ga0451577_0005746
493 Ga0451577_0059617
494 Ga0451577_0062469
495 Ga0451577_0154051
496 Ga0453683_0000358
497 Ga0453683_0009216
498 Ga0453683_0046038
499 Ga0453683_0118648
500 Ga0453683_0169751
501 Ga0453684_0000148
502 Ga0453684_0000607
503 Ga0453684_0000706
504 Ga0453684_0001448
505 Ga0453684_0001680
506 Ga0453684_0003019
507 Ga0453684_0005549
508 Ga0453684_0007194
509 Ga0453684_0008080
510 Ga0453684_0009587
511 Ga0453684_0010401
512 Ga0453684_0011516
513 Ga0453684_0011787
514 Ga0453684_0016088
515 Ga0453684_0021689
516 Ga0453684_0035471
517 Ga0453684_0035612
518 Ga0453684_0049065
519 Ga0453684_0054120
520 Ga0453684_0063107
521 Ga0453684_0108348
522 Ga0453684_0110428
523 Ga0453684_0187816
524 Ga0453684_0215148
525 Ga0453684_0230799
526 Ga0453684_0404519
527 Ga0451576_0000020
528 Ga0451576_0000044
529 Ga0451576_0000083
530 Ga0451576_0001670
531 Ga0451576_0003086
532 Ga0451576_0004814
533 Ga0451576_0025436
534 Ga0451576_0150476
535 Ga0451576_0260757
536 Ga0451576_0309616
537 Ga0451576_0644076
538 Ga0495638_0000006
539 Ga0495638_0062085
540 Ga0495596_0000765
541 Ga0495606_0008337
542 Ga0495606_0028111
543 Ga0495606_0114327
544 Ga0495610_0000005
545 Ga0495618_0278924
546 Ga0495632_0003875
547 Ga0495643_0038448
548 Ga0495643_0057294
549 Ga0495663_0000093
550 Ga0495654_0000003
551 Ga0495609_0000003
552 Ga0495633_0000001
553 Ga0495633_0000285
554 Ga0495625_0000096
555 Ga0495625_0047308
556 Ga0495687_007696
557 Ga0495686_0000069
558 Ga0495686_0000306
559 Ga0495686_0002485
560 Ga0496102_0052882
561 Ga0496103_0031743
562 Ga0496113_0019078
563 Ga0496116_0000029
564 Ga0496117_0000007
565 Ga0496118_0000104
566 Ga0496119_0000007
567 Ga0496121_0086418
568 Ga0496122_0000222
569 Ga0496122_0000393
570 Ga0496122_0000964
571 Ga0496122_0004977
572 Ga0496123_0001611
573 Ga0496123_0064480
574 Ga0496123_0082952
575 Ga0496124_0006298
576 Ga0496125_0003111
577 Ga0496125_0108848
578 Ga0496126_0001962
579 Ga0501032_0006605
580 Ga0501032_0010004
581 Ga0501033_0000004
582 Ga0501034_0001514
583 Ga0501038_0007006
584 Ga0501038_0065228
585 Ga0501039_0014623
586 Ga0501043_0014385
587 Ga0501207_020443
588 Ga0501210_000533
589 Ga0501223_042235
590 Ga0501257_007449
591 Ga0501241_000002
592 Ga0501264_000722
593 Ga0501269_000040
594 Ga0501035_0034936
595 Ga0501035_0076162
596 Ga0501044_0001251
597 nmdc:mga0k408_39084_c1
598 nmdc:mga0k408_71269_c1
599 nmdc:mga07m45_125907_c1
600 nmdc:mga0qj67_263060_c1
601 nmdc:mga08y16_42972_c1
602 Ga0500635_0002410
603 Ga0500559_0112085
604 Ga0500604_0019769
605 Ga0500616_0000082
606 Ga0500616_0008794
607 Ga0500622_0000010
608 Ga0500622_0000044
609 Ga0587111_0019600
610 2522553574
611 2585140972
612 2585425980
613 2587677142
614 2587746316
615 2587753793
616 2587865040
617 2587945241
618 2588211405
619 2588215782
620 2588219181
621 2588224681
622 2588234538
623 2588447474
624 2590603102
625 2590610107
626 2644643284
627 2729200874
628 2738698442
629 2739252768
630 2740060333
631 2753674116
632 2765575582
633 2772605949
634 2775674406
635 2816875435
636 2842086164
637 2852627101
638 2871723507
639 2884637176
640 2884935165
641 2889293906
642 2904559575
643 2905999072
644 2910249031
645 2911139727
646 2919098022
647 2919403284
648 2919439400
649 2919694260
650 2945924861
651 2946023999
652 2977243619
653 2984574385
654 2984607834
655 2993375173
656 2993482026
657 8036738907

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00698

Acyl_transf_1

Acyl transferase domain

35

324

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g2y-assembly1.cif.gz_A structure of e.coli fabd complexed with malonate 0.9724 1 290
3tqe-assembly1.cif.gz_A structure of the malonyl coa-acyl carrier protein transacylase (fabd) from coxiella burnetii 0.9683 2 290
3im9-assembly1.cif.gz_A crystal structure of mcat from staphylococcus aureus 0.9675 2 289
3h0p-assembly1.cif.gz_A 2.0 angstrom crystal structure of an acyl carrier protein s-malonyltransferase from salmonella typhimurium. 0.967 2 290
3qat-assembly1.cif.gz_A crystal structure of acyl-carrier-protein-s-malonyltransferase from bartonella henselae 0.9663 2 293
ID Description Score Start End Superfamily
af_P0AAI9_6_286_3.20.10.10 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.969 5 279 3.20.10.10
1nm2A02 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.9641 1 289 3.40.366.10
4rr5A01 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.9585 2 292 3.40.366.10
3im8A01 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.955 1 289 3.40.366.10
2g1hA01 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.9539 1 290 3.40.366.10
ID Description Score Start End GO Terms
AF-A0A383TTD0-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9938 1 289 GO:0004314
GO:0005829
GO:0006633
AF-S7VPN1-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9933 3 174 GO:0004314
GO:0005829
GO:0006633
AF-A0A352Z3K5-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9923 1 258 GO:0004314
GO:0005829
GO:0006633
AF-A0A2T2V7R9-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9913 1 170 GO:0004314
GO:0005829
GO:0006633
AF-A0A7Y5L829-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9895 2 265 GO:0004314
GO:0005829
GO:0006633

Map