F409443

General Info

Members Datasets Scaffolds Average Seq Length
328 192 656 331

Family's Representative Sequence

Representative Sequence 3300050491|nmdc:mga00v17_193802_c1|nmdc:mga00v17_193802_c1_188_1282
Length 364
Sequence MRVGSLTVFLAYVARFFTGSNLAKIWSGAGVDIMTRSLIVLPDDSAHPIIKAIDEAKRSLRVKMFAFSHPALLNAVIAARRRGVKVQVMLNSERRSGDRDNEHTRQVLERRHVDVRHANPAFDLTHEKSMVVDDAAAFVQSCNWVTKNLTETRDFAIVTTGKHDVADVVEGFDADWHRQVFSPRHETHLVWCPGGRDRVCEFIDRAKHRLWIQNERYQDMVVIERLVRAARRGVKVSVMARPPHTLKREKLVEGVGGLRILDDVGIEVRKIKPYKLHSKMMMADGVAAIVGSINLAPGSFDSRRELAIQVHDDDVLDRLTSVVHTDWAHSRTLDLSDEGLLADLEDRVEDSGRLLALDGTRDDD

Samples

Sample ID Description Type Environment
1 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
121 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
122 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
128 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
182 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
183 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
187 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
188 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
189 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
190 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
191 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
192 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.48
Metatranscriptomes 0
Isolates 1.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.01
Nodule 0.61
Rhizoplane 2.44
Rhizosphere 86.59
Stem 0
Stem Tuber 0
Unclassified 4.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga00v17_193802_c1 3300050491 Bacteria 1313
2 MBSR1b_contig_3732763 2162886012 Bacteria 2082
3 Ga0055540_1000750 3300003792 Bacteria 22042
4 Ga0065714_10106152 3300005288 Bacteria 1554
5 Ga0065712_10005269 3300005290 Bacteria 4334
6 Ga0065715_10097709 3300005293 Bacteria 3664
7 Ga0070658_10020188 3300005327 Bacteria 5337
8 Ga0070683_100059260 3300005329 Bacteria 3556
9 Ga0070670_100169155 3300005331 Bacteria 1896
10 Ga0068869_100071943 3300005334 Bacteria 2561
11 Ga0068869_100171193 3300005334 Bacteria 1696
12 Ga0070660_100020033 3300005339 Bacteria 4910
13 Ga0070660_100157155 3300005339 Bacteria 1831
14 Ga0070668_100055378 3300005347 Bacteria 3061
15 Ga0070669_100183514 3300005353 Bacteria 1638
16 Ga0070671_100013660 3300005355 Bacteria 6548
17 Ga0070673_100165044 3300005364 Unclassified 1886
18 Ga0070659_100033408 3300005366 Bacteria 3995
19 Ga0070667_100246314 3300005367 Bacteria 1597
20 Ga0070703_10005236 3300005406 Bacteria 3624
21 Ga0070710_10023735 3300005437 Bacteria 3227
22 Ga0070705_100085313 3300005440 Bacteria 1951
23 Ga0070708_100020908 3300005445 Bacteria 5526
24 Ga0070708_100047701 3300005445 Bacteria 3784
25 Ga0070708_100060285 3300005445 Bacteria 3386
26 Ga0070708_100145803 3300005445 Bacteria 2199
27 Ga0070708_100217167 3300005445 Bacteria 1793
28 Ga0070663_100077792 3300005455 Bacteria 2430
29 Ga0070678_100032841 3300005456 Bacteria 3597
30 Ga0068867_100094232 3300005459 Bacteria 2276
31 Ga0070685_10070806 3300005466 Bacteria 2066
32 Ga0070706_100112422 3300005467 Bacteria 2535
33 Ga0070706_100187655 3300005467 Bacteria 1932
34 Ga0070706_100253636 3300005467 Bacteria 1642
35 Ga0070707_100118818 3300005468 Bacteria 2566
36 Ga0070707_100537052 3300005468 Bacteria 1131
37 Ga0070698_100018089 3300005471 Bacteria 7420
38 Ga0070698_100081695 3300005471 Bacteria 3225
39 Ga0070698_100322358 3300005471 Bacteria 1476
40 Ga0070699_100004785 3300005518 Bacteria 11965
41 Ga0070699_100023986 3300005518 Bacteria 5258
42 Ga0070699_100222206 3300005518 Bacteria 1683
43 Ga0070699_100252024 3300005518 Bacteria 1577
44 Ga0070679_100019193 3300005530 Bacteria 6645
45 Ga0070679_100121266 3300005530 Bacteria 2599
46 Ga0070697_100025915 3300005536 Bacteria 4677
47 Ga0070697_100119677 3300005536 Bacteria 2202
48 Ga0070697_100160602 3300005536 Bacteria 1898
49 Ga0070697_100203176 3300005536 Unclassified 1684
50 Ga0070686_100139076 3300005544 Bacteria 1688
51 Ga0070695_100012773 3300005545 Bacteria 5041
52 Ga0070665_100027925 3300005548 Bacteria 5682
53 Ga0070665_100034125 3300005548 Bacteria 5116
54 Ga0070665_100048146 3300005548 Bacteria 4281
55 Ga0070665_100157248 3300005548 Bacteria 2275
56 Ga0070665_100223992 3300005548 Bacteria 1881
57 Ga0070665_100235248 3300005548 Bacteria 1832
58 Ga0070704_100040604 3300005549 Bacteria 3204
59 Ga0070704_100336907 3300005549 Bacteria 1269
60 Ga0068855_100019176 3300005563 Bacteria 8220
61 Ga0068855_100058215 3300005563 Bacteria 4526
62 Ga0068859_100491612 3300005617 Bacteria 1322
63 Ga0068864_100099405 3300005618 Bacteria 2577
64 Ga0068866_10031052 3300005718 Bacteria 2570
65 Ga0068861_100004429 3300005719 Bacteria 9421
66 Ga0068863_100012142 3300005841 Bacteria 8322
67 Ga0068858_100463438 3300005842 Bacteria 1222
68 Ga0068860_100002520 3300005843 Bacteria 19209
69 Ga0068860_100118794 3300005843 Bacteria 2531
70 Ga0075365_10123468 3300006038 Bacteria 1788
71 Ga0075364_10000989 3300006051 Bacteria 15052
72 Ga0075364_10012637 3300006051 Bacteria 5171
73 Ga0070716_100008020 3300006173 Bacteria 5228
74 Ga0070712_100006725 3300006175 Bacteria 7148
75 Ga0075362_10000156 3300006177 Bacteria 18510
76 Ga0075367_10001134 3300006178 Bacteria 11090
77 Ga0075369_10011049 3300006186 Bacteria 3542
78 Ga0097621_100046984 3300006237 Bacteria 3496
79 Ga0068871_100170762 3300006358 Bacteria 1864
80 Ga0075428_100050282 3300006844 Bacteria 4573
81 Ga0075431_100084740 3300006847 Unclassified 3271
82 Ga0075433_10004332 3300006852 Bacteria 11025
83 Ga0075433_10005885 3300006852 Bacteria 9659
84 Ga0075433_10033335 3300006852 Bacteria 4414
85 Ga0075433_10047403 3300006852 Bacteria 3737
86 Ga0075434_100001010 3300006871 Bacteria 22875
87 Ga0075434_100004935 3300006871 Bacteria 12094
88 Ga0075434_100008260 3300006871 Bacteria 9669
89 Ga0075434_100017474 3300006871 Bacteria 6913
90 Ga0075434_100067378 3300006871 Bacteria 3566
91 Ga0075434_100068306 3300006871 Bacteria 3540
92 Ga0075434_100146907 3300006871 Bacteria 2378
93 Ga0075434_100352428 3300006871 Bacteria 1493
94 Ga0075434_100368602 3300006871 Bacteria 1457
95 Ga0075434_100458151 3300006871 Unclassified 1296
96 Ga0075436_100001647 3300006914 Bacteria 15264
97 Ga0075436_100009824 3300006914 Bacteria 6544
98 Ga0075436_100030408 3300006914 Bacteria 3717
99 Ga0075436_100031181 3300006914 Bacteria 3670
100 Ga0075436_100075030 3300006914 Bacteria 2342
101 Ga0097620_100491599 3300006931 Bacteria 1322
102 Ga0075435_100000117 3300007076 Bacteria 44257
103 Ga0075435_100008650 3300007076 Bacteria 7318
104 Ga0075435_100042987 3300007076 Bacteria 3616
105 Ga0075435_100071891 3300007076 Bacteria 2825
106 Ga0075435_100076720 3300007076 Bacteria 2739
107 Ga0075435_100346255 3300007076 Bacteria 1274
108 Ga0099794_10000040 3300007265 Bacteria 51149
109 Ga0099794_10000604 3300007265 Bacteria 12017
110 Ga0099794_10042757 3300007265 Bacteria 2161
111 Ga0111539_10143162 3300009094 Bacteria 2799
112 Ga0114129_10000398 3300009147 Bacteria 50789
113 Ga0114129_10003149 3300009147 Bacteria 23158
114 Ga0114129_10004563 3300009147 Bacteria 19546
115 Ga0114129_10012832 3300009147 Bacteria 11923
116 Ga0114129_10020297 3300009147 Bacteria 9453
117 Ga0114129_10078218 3300009147 Bacteria 4601
118 Ga0114129_10375662 3300009147 Bacteria 1878
119 Ga0114129_10451339 3300009147 Bacteria 1686
120 Ga0105243_10114792 3300009148 Bacteria 2260
121 Ga0105248_10000732 3300009177 Bacteria 36950
122 Ga0105248_10034173 3300009177 Bacteria 5684
123 Ga0105237_10076515 3300009545 Bacteria 3337
124 Ga0105238_10022785 3300009551 Bacteria 6384
125 Ga0105249_10020533 3300009553 Bacteria 5905
126 Ga0105249_10524203 3300009553 Bacteria 1233
127 Ga0105246_10078733 3300011119 Bacteria 2342
128 Ga0157373_10007938 3300013100 Bacteria 7893
129 Ga0157371_10003322 3300013102 Bacteria 14700
130 Ga0157371_10005507 3300013102 Bacteria 10659
131 Ga0157370_10002477 3300013104 Bacteria 22268
132 Ga0163162_10000321 3300013306 Bacteria 44220
133 Ga0163162_10014242 3300013306 Bacteria 7769
134 Ga0163162_10406871 3300013306 Bacteria 1493
135 Ga0157372_10019204 3300013307 Bacteria 7359
136 Ga0157372_10067968 3300013307 Bacteria 4006
137 Ga0157372_10350241 3300013307 Bacteria 1721
138 Ga0157375_10315762 3300013308 Unclassified 1727
139 Ga0157375_10555289 3300013308 Bacteria 1310
140 Ga0163163_10000048 3300014325 Bacteria 130746
141 Ga0163163_10008802 3300014325 Bacteria 8984
142 Ga0163163_10036985 3300014325 Bacteria 4746
143 Ga0157380_10016419 3300014326 Bacteria 5461
144 Ga0157380_10035231 3300014326 Bacteria 3865
145 Ga0157379_10104529 3300014968 Bacteria 2541
146 Ga0157379_10164222 3300014968 Unclassified 2004
147 Ga0157376_10066392 3300014969 Bacteria 3049
148 Ga0157376_10081187 3300014969 Unclassified 2784
149 Ga0163161_10005350 3300017792 Bacteria 8922
150 Ga0163161_10226236 3300017792 Unclassified 1450
151 Ga0209025_1065292 3300025294 Bacteria 1330
152 Ga0209564_1004967 3300025295 Bacteria 7841
153 Ga0209051_1000267 3300025303 Bacteria 87276
154 Ga0209051_1021281 3300025303 Bacteria 2766
155 Ga0207653_10019125 3300025885 Unclassified 2159
156 Ga0207682_10126122 3300025893 Unclassified 1139
157 Ga0207692_10030995 3300025898 Bacteria 2556
158 Ga0207684_10028815 3300025910 Bacteria 4729
159 Ga0207684_10055162 3300025910 Bacteria 3372
160 Ga0207684_10100291 3300025910 Bacteria 2474
161 Ga0207671_10054040 3300025914 Bacteria 2976
162 Ga0207693_10041240 3300025915 Bacteria 3634
163 Ga0207657_10011131 3300025919 Bacteria 8942
164 Ga0207657_10061251 3300025919 Bacteria 3227
165 Ga0207652_10000029 3300025921 Bacteria 149054
166 Ga0207646_10004538 3300025922 Bacteria 15034
167 Ga0207646_10009115 3300025922 Bacteria 9848
168 Ga0207646_10405587 3300025922 Unclassified 1231
169 Ga0207681_10179635 3300025923 Bacteria 1611
170 Ga0207650_10107466 3300025925 Bacteria 2156
171 Ga0207690_10078295 3300025932 Bacteria 2300
172 Ga0207665_10008607 3300025939 Bacteria 6715
173 Ga0207711_10016315 3300025941 Bacteria 6170
174 Ga0207711_10098607 3300025941 Bacteria 2582
175 Ga0207711_10226749 3300025941 Bacteria 1711
176 Ga0207661_10119832 3300025944 Bacteria 2239
177 Ga0207667_10077858 3300025949 Bacteria 3437
178 Ga0207712_10066936 3300025961 Bacteria 2569
179 Ga0207712_10141484 3300025961 Bacteria 1847
180 Ga0207641_10009040 3300026088 Bacteria 8232
181 Ga0207648_10006920 3300026089 Bacteria 11238
182 Ga0207648_10052500 3300026089 Bacteria 3564
183 Ga0207676_10144994 3300026095 Bacteria 2038
184 Ga0207676_10278288 3300026095 Unclassified 1518
185 Ga0207675_100020293 3300026118 Bacteria 6196
186 Ga0207683_10014025 3300026121 Bacteria 6832
187 Ga0207698_10306052 3300026142 Bacteria 1482
188 Ga0209588_1000070 3300027671 Bacteria 34509
189 Ga0209588_1019123 3300027671 Bacteria 2136
190 Ga0209813_10012163 3300027866 Bacteria 2266
191 Ga0268266_10015210 3300028379 Bacteria 6609
192 Ga0268266_10061239 3300028379 Bacteria 3245
193 Ga0268266_10077315 3300028379 Bacteria 2893
194 Ga0268266_10170976 3300028379 Bacteria 1972
195 Ga0268266_10274358 3300028379 Bacteria 1566
196 Ga0268264_10001220 3300028381 Bacteria 24721
197 Ga0265338_10066136 3300028800 Bacteria 3130
198 Ga0265325_10082004 3300031241 Bacteria 1601
199 Ga0265340_10154241 3300031247 Bacteria 1045
200 Ga0265327_10000081 3300031251 Bacteria 205988
201 Ga0265313_10019168 3300031595 Bacteria 3819
202 Ga0373947_0161238 3300035725 Bacteria 1450
203 Ga0395899_0009938 3300037312 Bacteria 7298
204 Ga0395899_0081198 3300037312 Bacteria 2359
205 Ga0395900_0141083 3300037418 Bacteria 2467
206 Ga0395898_0004602 3300037466 Bacteria 15059
207 Ga0395898_0057417 3300037466 Bacteria 3793
208 Ga0395901_0026444 3300038443 Bacteria 5958
209 Ga0439466_0008593 3300041411 Bacteria 3848
210 Ga0439465_0004745 3300041413 Bacteria 4379
211 Ga0450889_006757 3300042144 Bacteria 1154
212 Ga0466969_0072156 3300044656 Bacteria 1659
213 Ga0466972_0003831 3300044658 Bacteria 7484
214 Ga0466972_0041623 3300044658 Bacteria 2236
215 Ga0466972_0116671 3300044658 Bacteria 1260
216 Ga0466965_0004519 3300044683 Bacteria 6192
217 Ga0466965_0005627 3300044683 Bacteria 5656
218 Ga0466961_0013615 3300044693 Bacteria 5210
219 Ga0466971_0043864 3300044719 Bacteria 2009
220 Ga0466968_0004124 3300044735 Bacteria 5410
221 Ga0466957_0012144 3300044842 Bacteria 4982
222 Ga0466957_0049634 3300044842 Bacteria 2552
223 Ga0466957_0230090 3300044842 Bacteria 1227
224 Ga0466960_0047320 3300044901 Bacteria 2062
225 Ga0466960_0077919 3300044901 Bacteria 1663
226 Ga0466959_0018444 3300045049 Bacteria 5122
227 Ga0466959_0023782 3300045049 Bacteria 4536
228 Ga0451576_0020014 3300045051 Bacteria 7294
229 Ga0466958_0135359 3300045836 Bacteria 1549
230 Ga0466967_0018468 3300045976 Bacteria 5575
231 Ga0466967_0033341 3300045976 Bacteria 4358
232 Ga0495629_0405837 3300046459 Bacteria 926
233 Ga0495650_0030862 3300046471 Bacteria 2420
234 Ga0495580_0167485 3300046472 Unclassified 1519
235 Ga0495625_0000166 3300046660 Bacteria 102927
236 Ga0495623_0110671 3300046679 Bacteria 1665
237 Ga0495672_0006022 3300047320 Bacteria 9488
238 Ga0495686_0048902 3300047472 Bacteria 2664
239 Ga0496104_0043530 3300048907 Bacteria 4217
240 Ga0496106_0117699 3300048909 Bacteria 2074
241 Ga0496108_0057767 3300048911 Bacteria 3260
242 Ga0496112_0014723 3300048915 Bacteria 7273
243 Ga0496112_0014951 3300048915 Bacteria 7223
244 Ga0496113_0002167 3300048916 Bacteria 11333
245 Ga0496113_0038293 3300048916 Bacteria 3525
246 Ga0496114_0515804 3300048917 Bacteria 1057
247 Ga0496121_0004451 3300048924 Bacteria 18820
248 Ga0496121_0068096 3300048924 Bacteria 2882
249 Ga0496122_0040695 3300048925 Bacteria 3687
250 Ga0496122_0065291 3300048925 Bacteria 2640
251 Ga0496123_0014198 3300048926 Bacteria 6620
252 Ga0496123_0093066 3300048926 Bacteria 1781
253 Ga0496124_0139811 3300048927 Bacteria 1912
254 Ga0496126_0063990 3300048929 Bacteria 3295
255 Ga0501032_0000235 3300049569 Bacteria 46101
256 Ga0501033_0001740 3300049570 Bacteria 19032
257 Ga0501033_0209260 3300049570 Unclassified 1391
258 Ga0501034_0001974 3300049571 Bacteria 25992
259 Ga0501036_0002116 3300049572 Bacteria 15507
260 Ga0501036_0639822 3300049572 Bacteria 881
261 Ga0501037_0000261 3300049573 Bacteria 45475
262 Ga0501038_0018660 3300049574 Bacteria 6264
263 Ga0501039_0000161 3300049575 Bacteria 46280
264 Ga0501042_0179097 3300049578 Bacteria 1529
265 Ga0501043_0000368 3300049579 Bacteria 40763
266 Ga0501047_0003884 3300049581 Bacteria 14047
267 Ga0501048_0022672 3300049582 Bacteria 4590
268 Ga0501067_0055964 3300049583 Bacteria 2186
269 Ga0501068_0000391 3300049584 Bacteria 22212
270 Ga0501070_0000293 3300049586 Bacteria 46678
271 Ga0501073_0002363 3300049589 Bacteria 14125
272 Ga0501080_0000149 3300049742 Bacteria 49826
273 Ga0501035_0007859 3300049822 Bacteria 9971
274 Ga0501044_0001013 3300049823 Bacteria 33753
275 Ga0501045_0028816 3300049824 Bacteria 4008
276 nmdc:mga03n38_163602_c1 3300050490 Bacteria 1128
277 nmdc:mga00v17_61870_c1 3300050491 Bacteria 2302
278 nmdc:mga0k408_29257_c1 3300050493 Bacteria 3135
279 nmdc:mga04h51_50304_c1 3300050495 Bacteria 1396
280 nmdc:mga05p37_2935_c1 3300050507 Bacteria 15505
281 nmdc:mga05p37_336529_c1 3300050507 Bacteria 1781
282 nmdc:mga05p37_377_c1 3300050507 Bacteria 48005
283 nmdc:mga05p37_62822_c1 3300050507 Bacteria 4570
284 nmdc:mga05p37_91783_c1 3300050507 Bacteria 3742
285 nmdc:mga08y16_157247_c1 3300050511 Bacteria 2362
286 nmdc:mga0n895_101511_c1 3300050512 Bacteria 2887
287 nmdc:mga0n895_137_c1 3300050512 Bacteria 43956
288 nmdc:mga0n895_14176_c1 3300050512 Bacteria 7229
289 nmdc:mga0n895_164601_c1 3300050512 Bacteria 2249
290 nmdc:mga0n895_16480_c1 3300050512 Bacteria 6783
291 nmdc:mga0n895_246608_c1 3300050512 Bacteria 1813
292 nmdc:mga0n895_252740_c1 3300050512 Bacteria 1789
293 nmdc:mga0n895_295142_c1 3300050512 Bacteria 1643
294 nmdc:mga0n895_325023_c1 3300050512 Bacteria 1559
295 nmdc:mga0n895_355508_c1 3300050512 Unclassified 1484
296 nmdc:mga0n895_64534_c1 3300050512 Bacteria 3622
297 nmdc:mga0n895_70820_c1 3300050512 Bacteria 3456
298 nmdc:mga0n895_76376_c1 3300050512 Bacteria 3331
299 nmdc:mga0rr50_115070_c1 3300050513 Bacteria 2134
300 nmdc:mga0rr50_22_c1 3300050513 Bacteria 123539
301 nmdc:mga0rr50_249331_c1 3300050513 Bacteria 1474
302 nmdc:mga0rr50_69725_c1 3300050513 Bacteria 2676
303 nmdc:mga0rr50_92786_c1 3300050513 Bacteria 2354
304 nmdc:mga08x19_10801_c1 3300050514 Bacteria 5491
305 nmdc:mga08x19_1526_c1 3300050514 Bacteria 14358
306 nmdc:mga08x19_15592_c1 3300050514 Bacteria 4624
307 nmdc:mga08x19_25902_c1 3300050514 Bacteria 3657
308 nmdc:mga08x19_36584_c1 3300050514 Bacteria 3110
309 nmdc:mga0a205_10882_c1 3300050515 Bacteria 8371
310 nmdc:mga0a205_21122_c1 3300050515 Bacteria 6156
311 nmdc:mga0a205_217309_c1 3300050515 Bacteria 1798
312 nmdc:mga0a205_30085_c1 3300050515 Bacteria 5198
313 nmdc:mga0a205_33160_c1 3300050515 Bacteria 4952
314 nmdc:mga0a205_45876_c1 3300050515 Bacteria 4215
315 nmdc:mga0a205_57429_c1 3300050515 Bacteria 3758
316 Ga0500651_0003073 3300053093 Bacteria 9032
317 Ga0500641_0009309 3300053096 Bacteria 3531
318 Ga0500595_061324 3300053119 Bacteria 1135
319 Ga0500559_0033061 3300053136 Bacteria 2226
320 Ga0500568_0002443 3300053139 Bacteria 10935
321 Ga0500577_0001303 3300053142 Bacteria 6376
322 Ga0466962_0019591 3300061719 Bacteria 3253
323 Ga0466962_0166309 3300061719 Bacteria 1073
324 2644633651 2643221715 Bacteria 6671032
325 2849077372 2849076700 Bacteria 7039503
326 2902815059 2902810491 Bacteria 6794147
327 8006991456 8006984368 Bacteria 9651211
328 8056676747 8056673599 Bacteria 7871253
329 nmdc:mga00v17_193802_c1
330 MBSR1b_contig_3732763
331 Ga0055540_1000750
332 Ga0065714_10106152
333 Ga0065712_10005269
334 Ga0065715_10097709
335 Ga0070658_10020188
336 Ga0070683_100059260
337 Ga0070670_100169155
338 Ga0068869_100071943
339 Ga0068869_100171193
340 Ga0070660_100020033
341 Ga0070660_100157155
342 Ga0070668_100055378
343 Ga0070669_100183514
344 Ga0070671_100013660
345 Ga0070673_100165044
346 Ga0070659_100033408
347 Ga0070667_100246314
348 Ga0070703_10005236
349 Ga0070710_10023735
350 Ga0070705_100085313
351 Ga0070708_100020908
352 Ga0070708_100047701
353 Ga0070708_100060285
354 Ga0070708_100145803
355 Ga0070708_100217167
356 Ga0070663_100077792
357 Ga0070678_100032841
358 Ga0068867_100094232
359 Ga0070685_10070806
360 Ga0070706_100112422
361 Ga0070706_100187655
362 Ga0070706_100253636
363 Ga0070707_100118818
364 Ga0070707_100537052
365 Ga0070698_100018089
366 Ga0070698_100081695
367 Ga0070698_100322358
368 Ga0070699_100004785
369 Ga0070699_100023986
370 Ga0070699_100222206
371 Ga0070699_100252024
372 Ga0070679_100019193
373 Ga0070679_100121266
374 Ga0070697_100025915
375 Ga0070697_100119677
376 Ga0070697_100160602
377 Ga0070697_100203176
378 Ga0070686_100139076
379 Ga0070695_100012773
380 Ga0070665_100027925
381 Ga0070665_100034125
382 Ga0070665_100048146
383 Ga0070665_100157248
384 Ga0070665_100223992
385 Ga0070665_100235248
386 Ga0070704_100040604
387 Ga0070704_100336907
388 Ga0068855_100019176
389 Ga0068855_100058215
390 Ga0068859_100491612
391 Ga0068864_100099405
392 Ga0068866_10031052
393 Ga0068861_100004429
394 Ga0068863_100012142
395 Ga0068858_100463438
396 Ga0068860_100002520
397 Ga0068860_100118794
398 Ga0075365_10123468
399 Ga0075364_10000989
400 Ga0075364_10012637
401 Ga0070716_100008020
402 Ga0070712_100006725
403 Ga0075362_10000156
404 Ga0075367_10001134
405 Ga0075369_10011049
406 Ga0097621_100046984
407 Ga0068871_100170762
408 Ga0075428_100050282
409 Ga0075431_100084740
410 Ga0075433_10004332
411 Ga0075433_10005885
412 Ga0075433_10033335
413 Ga0075433_10047403
414 Ga0075434_100001010
415 Ga0075434_100004935
416 Ga0075434_100008260
417 Ga0075434_100017474
418 Ga0075434_100067378
419 Ga0075434_100068306
420 Ga0075434_100146907
421 Ga0075434_100352428
422 Ga0075434_100368602
423 Ga0075434_100458151
424 Ga0075436_100001647
425 Ga0075436_100009824
426 Ga0075436_100030408
427 Ga0075436_100031181
428 Ga0075436_100075030
429 Ga0097620_100491599
430 Ga0075435_100000117
431 Ga0075435_100008650
432 Ga0075435_100042987
433 Ga0075435_100071891
434 Ga0075435_100076720
435 Ga0075435_100346255
436 Ga0099794_10000040
437 Ga0099794_10000604
438 Ga0099794_10042757
439 Ga0111539_10143162
440 Ga0114129_10000398
441 Ga0114129_10003149
442 Ga0114129_10004563
443 Ga0114129_10012832
444 Ga0114129_10020297
445 Ga0114129_10078218
446 Ga0114129_10375662
447 Ga0114129_10451339
448 Ga0105243_10114792
449 Ga0105248_10000732
450 Ga0105248_10034173
451 Ga0105237_10076515
452 Ga0105238_10022785
453 Ga0105249_10020533
454 Ga0105249_10524203
455 Ga0105246_10078733
456 Ga0157373_10007938
457 Ga0157371_10003322
458 Ga0157371_10005507
459 Ga0157370_10002477
460 Ga0163162_10000321
461 Ga0163162_10014242
462 Ga0163162_10406871
463 Ga0157372_10019204
464 Ga0157372_10067968
465 Ga0157372_10350241
466 Ga0157375_10315762
467 Ga0157375_10555289
468 Ga0163163_10000048
469 Ga0163163_10008802
470 Ga0163163_10036985
471 Ga0157380_10016419
472 Ga0157380_10035231
473 Ga0157379_10104529
474 Ga0157379_10164222
475 Ga0157376_10066392
476 Ga0157376_10081187
477 Ga0163161_10005350
478 Ga0163161_10226236
479 Ga0209025_1065292
480 Ga0209564_1004967
481 Ga0209051_1000267
482 Ga0209051_1021281
483 Ga0207653_10019125
484 Ga0207682_10126122
485 Ga0207692_10030995
486 Ga0207684_10028815
487 Ga0207684_10055162
488 Ga0207684_10100291
489 Ga0207671_10054040
490 Ga0207693_10041240
491 Ga0207657_10011131
492 Ga0207657_10061251
493 Ga0207652_10000029
494 Ga0207646_10004538
495 Ga0207646_10009115
496 Ga0207646_10405587
497 Ga0207681_10179635
498 Ga0207650_10107466
499 Ga0207690_10078295
500 Ga0207665_10008607
501 Ga0207711_10016315
502 Ga0207711_10098607
503 Ga0207711_10226749
504 Ga0207661_10119832
505 Ga0207667_10077858
506 Ga0207712_10066936
507 Ga0207712_10141484
508 Ga0207641_10009040
509 Ga0207648_10006920
510 Ga0207648_10052500
511 Ga0207676_10144994
512 Ga0207676_10278288
513 Ga0207675_100020293
514 Ga0207683_10014025
515 Ga0207698_10306052
516 Ga0209588_1000070
517 Ga0209588_1019123
518 Ga0209813_10012163
519 Ga0268266_10015210
520 Ga0268266_10061239
521 Ga0268266_10077315
522 Ga0268266_10170976
523 Ga0268266_10274358
524 Ga0268264_10001220
525 Ga0265338_10066136
526 Ga0265325_10082004
527 Ga0265340_10154241
528 Ga0265327_10000081
529 Ga0265313_10019168
530 Ga0373947_0161238
531 Ga0395899_0009938
532 Ga0395899_0081198
533 Ga0395900_0141083
534 Ga0395898_0004602
535 Ga0395898_0057417
536 Ga0395901_0026444
537 Ga0439466_0008593
538 Ga0439465_0004745
539 Ga0450889_006757
540 Ga0466969_0072156
541 Ga0466972_0003831
542 Ga0466972_0041623
543 Ga0466972_0116671
544 Ga0466965_0004519
545 Ga0466965_0005627
546 Ga0466961_0013615
547 Ga0466971_0043864
548 Ga0466968_0004124
549 Ga0466957_0012144
550 Ga0466957_0049634
551 Ga0466957_0230090
552 Ga0466960_0047320
553 Ga0466960_0077919
554 Ga0466959_0018444
555 Ga0466959_0023782
556 Ga0451576_0020014
557 Ga0466958_0135359
558 Ga0466967_0018468
559 Ga0466967_0033341
560 Ga0495629_0405837
561 Ga0495650_0030862
562 Ga0495580_0167485
563 Ga0495625_0000166
564 Ga0495623_0110671
565 Ga0495672_0006022
566 Ga0495686_0048902
567 Ga0496104_0043530
568 Ga0496106_0117699
569 Ga0496108_0057767
570 Ga0496112_0014723
571 Ga0496112_0014951
572 Ga0496113_0002167
573 Ga0496113_0038293
574 Ga0496114_0515804
575 Ga0496121_0004451
576 Ga0496121_0068096
577 Ga0496122_0040695
578 Ga0496122_0065291
579 Ga0496123_0014198
580 Ga0496123_0093066
581 Ga0496124_0139811
582 Ga0496126_0063990
583 Ga0501032_0000235
584 Ga0501033_0001740
585 Ga0501033_0209260
586 Ga0501034_0001974
587 Ga0501036_0002116
588 Ga0501036_0639822
589 Ga0501037_0000261
590 Ga0501038_0018660
591 Ga0501039_0000161
592 Ga0501042_0179097
593 Ga0501043_0000368
594 Ga0501047_0003884
595 Ga0501048_0022672
596 Ga0501067_0055964
597 Ga0501068_0000391
598 Ga0501070_0000293
599 Ga0501073_0002363
600 Ga0501080_0000149
601 Ga0501035_0007859
602 Ga0501044_0001013
603 Ga0501045_0028816
604 nmdc:mga03n38_163602_c1
605 nmdc:mga00v17_61870_c1
606 nmdc:mga0k408_29257_c1
607 nmdc:mga04h51_50304_c1
608 nmdc:mga05p37_2935_c1
609 nmdc:mga05p37_336529_c1
610 nmdc:mga05p37_377_c1
611 nmdc:mga05p37_62822_c1
612 nmdc:mga05p37_91783_c1
613 nmdc:mga08y16_157247_c1
614 nmdc:mga0n895_101511_c1
615 nmdc:mga0n895_137_c1
616 nmdc:mga0n895_14176_c1
617 nmdc:mga0n895_164601_c1
618 nmdc:mga0n895_16480_c1
619 nmdc:mga0n895_246608_c1
620 nmdc:mga0n895_252740_c1
621 nmdc:mga0n895_295142_c1
622 nmdc:mga0n895_325023_c1
623 nmdc:mga0n895_355508_c1
624 nmdc:mga0n895_64534_c1
625 nmdc:mga0n895_70820_c1
626 nmdc:mga0n895_76376_c1
627 nmdc:mga0rr50_115070_c1
628 nmdc:mga0rr50_22_c1
629 nmdc:mga0rr50_249331_c1
630 nmdc:mga0rr50_69725_c1
631 nmdc:mga0rr50_92786_c1
632 nmdc:mga08x19_10801_c1
633 nmdc:mga08x19_1526_c1
634 nmdc:mga08x19_15592_c1
635 nmdc:mga08x19_25902_c1
636 nmdc:mga08x19_36584_c1
637 nmdc:mga0a205_10882_c1
638 nmdc:mga0a205_21122_c1
639 nmdc:mga0a205_217309_c1
640 nmdc:mga0a205_30085_c1
641 nmdc:mga0a205_33160_c1
642 nmdc:mga0a205_45876_c1
643 nmdc:mga0a205_57429_c1
644 Ga0500651_0003073
645 Ga0500641_0009309
646 Ga0500595_061324
647 Ga0500559_0033061
648 Ga0500568_0002443
649 Ga0500577_0001303
650 Ga0466962_0019591
651 Ga0466962_0166309
652 2644633651
653 2849077372
654 2902815059
655 8006991456
656 8056676747

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13091

PLDc_2

PLD-like domain

49

176

0.95

PF13091

PLDc_2

PLD-like domain

199

327

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8619 2 151
6ehi-assembly5.cif.gz_J nuct from helicobacter pylori 0.8514 3 145
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.846 2 151
7e0m-assembly2.cif.gz_B crystal structure of phospholipase d 0.841 2 303
4ggj-assembly1.cif.gz_A crystal structure of zucchini from mouse (mzuc / pld6 / mitopld) 0.823 3 144
ID Description Score Start End Superfamily
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9043 165 299 3.30.870.10
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8959 165 301 3.30.870.10
af_Q8N2A8_32_212_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.876 14 151 3.30.870.10
1bysA00 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8727 2 151 3.30.870.10
af_Q54K50_253_430_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.87 3 143 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A011PSH3-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9825 1 194 GO:0004630
GO:0006793
GO:0016042
GO:0016891
AF-A0A6N6P1Y0-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9799 3 143 GO:0006793
GO:0016042
GO:0016891
AF-A0A535I9Y3-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.974 2 176 GO:0006793
GO:0016042
GO:0016891
AF-A0A011PSH3-F1-model_v4 phospholipase D (EC 3.1.4.4) 0.9726 1 194 GO:0004630
GO:0006793
GO:0016042
GO:0016891
AF-A0A7V9VEB0-F1-model_v4 PLD phosphodiesterase domain-containing protein 0.9715 4 302 GO:0006793
GO:0016042
GO:0016891

Map