F409495

General Info

Members Datasets Scaffolds Average Seq Length
329 220 659 260

Family's Representative Sequence

Representative Sequence 3300002774|JGI25150J39212_1001573|JGI25150J39212_10015733
Length 283
Sequence MTTGSKKPTWAFERTPKPSFLPIRFPTTMNKIFDRPADLRMASRCGEFSLPTAGHANGHIQANLMIVPQAQAFDFLLFCQRNPKPCPLVEVLQPGATEPLCAPGADITTDIPGYRVYRDGEFVEERGEIRSIWKDDYVAFLIGCSFSFEAAVTQAGIPLRHVEQGRNVSMFRTSLQCQPAGVFSGEMVVTMRPIKSRDVAKVVEISGRFDVAHGAPVHIGNPEAIGITDLSRPDYGDAVDIKDDEVPVFWGCGVTPQWVAQKSRLSMCITHAPGKMFVTDLKG

Samples

Sample ID Description Type Environment
1 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
14 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
15 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
16 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
17 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
20 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
21 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
22 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
26 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
27 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
28 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
29 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
32 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
49 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
77 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
81 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
83 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
84 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
85 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
88 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
95 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
97 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
100 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
129 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
130 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
131 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
137 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
142 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
143 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
144 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
145 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
146 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
147 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
148 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
149 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
150 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
151 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
152 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
153 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
156 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
187 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
190 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
191 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
192 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
193 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
198 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
199 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
200 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
201 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
202 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
203 2643221596 Acidovorax sp. Root70 Isolate Unclassified
204 2643221611 Acidovorax sp. Root219 Isolate Unclassified
205 2718217927 Rhizobium sp. N324 Isolate Nodule
206 2718218423 Rhizobium sp. N941 Isolate Nodule
207 2721755809 Rhizobium sp. N541 Isolate Nodule
208 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
209 2791355256 Rhizobium sp. M10 Isolate Nodule
210 2791355262 Rhizobium sp. M1 Isolate Nodule
211 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
212 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
213 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
214 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
215 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
216 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
217 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
218 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
219 8005275841 Rhizobium sp. N4311 Isolate Nodule
220 8018176218 Rhizobium sp. N122 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.31
Metatranscriptomes 0
Isolates 6.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.01
Nodule 3.65
Rhizoplane 0.3
Rhizosphere 63.22
Stem 0
Stem Tuber 0
Unclassified 2.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1001573 3300002774 Bacteria 6238
2 JGI25155J39150_1000071 3300002704 Bacteria 64384
3 JGI25156J39149_1000071 3300002705 Bacteria 80446
4 JGI25156J39149_1000097 3300002705 Bacteria 64372
5 JGI25156J39149_1011546 3300002705 Bacteria 1991
6 JGI25154J39366_1000093 3300002738 Bacteria 80476
7 JGI25157J39369_1000088 3300002741 Bacteria 80446
8 JGI25159J45721_1001801 3300002987 Bacteria 8594
9 JGI25151J46595_10010638 3300003187 Bacteria 4261
10 JGI25151J46595_10018561 3300003187 Bacteria 2981
11 rootH1_10010099 3300003316 Bacteria 4008
12 rootH2_10011840 3300003320 Bacteria 1241
13 rootL2_10045917 3300003322 Bacteria 1554
14 rootH1_10050453 3300003323 Bacteria 3646
15 rootH1_10105393 3300003316 Bacteria 1187
16 rootH1_10105393 3300003323 Bacteria 2808
17 JGI25160J50197_1000783 3300003354 Bacteria 17065
18 JGI25161J50226_1000008 3300003374 Bacteria 239245
19 Ga0055539_1000277 3300003752 Bacteria 29675
20 Ga0055533_1000026 3300003756 Bacteria 323407
21 Ga0055535_1000056 3300003761 Bacteria 128204
22 Ga0055529_1000165 3300003763 Bacteria 91442
23 Ga0055526_1001317 3300003771 Bacteria 17783
24 Ga0055526_1001347 3300003771 Bacteria 17582
25 Ga0055526_1015625 3300003771 Bacteria 3036
26 Ga0055526_1018792 3300003771 Bacteria 2557
27 Ga0055537_1000396 3300003773 Bacteria 29249
28 Ga0055524_1000057 3300003775 Bacteria 139566
29 Ga0055524_1000126 3300003775 Bacteria 89985
30 Ga0055536_1001371 3300003781 Bacteria 14806
31 Ga0055534_1010933 3300003784 Bacteria 1869
32 Ga0055528_1001958 3300003790 Bacteria 11629
33 Ga0055530_10004048 3300003791 Bacteria 7870
34 Ga0055540_1000021 3300003792 Bacteria 208733
35 Ga0055540_1000158 3300003792 Bacteria 67050
36 Ga0055540_1023468 3300003792 Bacteria 1554
37 Ga0055531_10001425 3300003794 Bacteria 17650
38 Ga0055543_1001180 3300004625 Bacteria 11030
39 Ga0055543_1001695 3300004625 Bacteria 8323
40 Ga0065165_1000496 3300005262 Bacteria 60846
41 Ga0068868_100103485 3300005338 Bacteria 2306
42 Ga0070673_100002753 3300005364 Bacteria 10798
43 Ga0070711_100451272 3300005439 Bacteria 1052
44 Ga0070708_100107537 3300005445 Bacteria 2561
45 Ga0070662_100000931 3300005457 Bacteria 17917
46 Ga0068867_100000018 3300005459 Bacteria 102056
47 Ga0070706_100083613 3300005467 Unclassified 2957
48 Ga0070707_100316245 3300005468 Bacteria 1517
49 Ga0070698_100044414 3300005471 Unclassified 4550
50 Ga0070699_100050993 3300005518 Unclassified 3583
51 Ga0070699_100358203 3300005518 Bacteria 1315
52 Ga0070697_100100189 3300005536 Unclassified 2406
53 Ga0070665_100149811 3300005548 Bacteria 2336
54 Ga0068855_100043418 3300005563 Bacteria 5325
55 Ga0068855_100160201 3300005563 Bacteria 2555
56 Ga0068855_100584062 3300005563 Bacteria 1206
57 Ga0068856_100030960 3300005614 Bacteria 5234
58 Ga0068852_100011006 3300005616 Bacteria 6787
59 Ga0068863_100104499 3300005841 Bacteria 2694
60 Ga0068863_100553955 3300005841 Bacteria 1135
61 Ga0081455_10001103 3300005937 Bacteria 33934
62 Ga0081455_10001975 3300005937 Bacteria 24499
63 Ga0081455_10097000 3300005937 Bacteria 2376
64 Ga0081538_10060990 3300005981 Bacteria 2163
65 Ga0081538_10092330 3300005981 Bacteria 1559
66 Ga0075365_10224411 3300006038 Bacteria 1318
67 Ga0075365_10357412 3300006038 Bacteria 1030
68 Ga0075432_10034655 3300006058 Bacteria 1754
69 Ga0070712_100004446 3300006175 Bacteria 8653
70 Ga0075362_10009960 3300006177 Bacteria 3694
71 Ga0075366_10146174 3300006195 Bacteria 1430
72 Ga0075366_10232673 3300006195 Bacteria 1123
73 Ga0075370_10278874 3300006353 Bacteria 993
74 Ga0075428_100005640 3300006844 Bacteria 13911
75 Ga0075428_100220260 3300006844 Bacteria 2049
76 Ga0075430_100315916 3300006846 Bacteria 1292
77 Ga0075431_100085617 3300006847 Bacteria 3253
78 Ga0075431_100172719 3300006847 Bacteria 2221
79 Ga0075433_10005809 3300006852 Bacteria 9714
80 Ga0075433_10015734 3300006852 Bacteria 6215
81 Ga0075433_10025530 3300006852 Bacteria 4995
82 Ga0075434_100040743 3300006871 Bacteria 4600
83 Ga0075434_100056998 3300006871 Bacteria 3883
84 Ga0075429_100005170 3300006880 Bacteria 11221
85 Ga0075429_100162226 3300006880 Bacteria 1958
86 Ga0075429_100363591 3300006880 Bacteria 1267
87 Ga0075436_100112352 3300006914 Bacteria 1902
88 Ga0075435_100107743 3300007076 Bacteria 2314
89 Ga0075435_100118276 3300007076 Bacteria 2209
90 Ga0105240_10013955 3300009093 Bacteria 10999
91 Ga0111539_10218244 3300009094 Unclassified 2221
92 Ga0111539_10852080 3300009094 Bacteria 1060
93 Ga0105245_10070273 3300009098 Bacteria 3177
94 Ga0105245_10548708 3300009098 Bacteria 1177
95 Ga0105247_10255041 3300009101 Bacteria 1200
96 Ga0114129_10021656 3300009147 Bacteria 9123
97 Ga0114129_10023516 3300009147 Bacteria 8734
98 Ga0114129_10139077 3300009147 Bacteria 3330
99 Ga0114129_10244361 3300009147 Unclassified 2412
100 Ga0105243_10014188 3300009148 Bacteria 6030
101 Ga0105243_10079532 3300009148 Bacteria 2672
102 Ga0105241_10053397 3300009174 Bacteria 3090
103 Ga0105241_10073996 3300009174 Bacteria 2652
104 Ga0105242_10269901 3300009176 Bacteria 1540
105 Ga0105248_10355253 3300009177 Bacteria 1650
106 Ga0105246_10071545 3300011119 Bacteria 2442
107 Ga0157369_10459835 3300013105 Bacteria 1318
108 Ga0157378_10151119 3300013297 Bacteria 2164
109 Ga0157378_10201306 3300013297 Bacteria 1883
110 Ga0157372_10846916 3300013307 Bacteria 1061
111 Ga0157377_10000051 3300014745 Bacteria 90204
112 Ga0157379_10043115 3300014968 Bacteria 4028
113 Ga0209435_100014 3300025206 Bacteria 322129
114 Ga0209436_104090 3300025208 Bacteria 3675
115 Ga0209674_100024 3300025226 Bacteria 535481
116 Ga0209563_100069 3300025230 Bacteria 253154
117 Ga0207427_102991 3300025231 Bacteria 3927
118 Ga0209258_100071 3300025242 Bacteria 278319
119 Ga0207425_1000985 3300025245 Bacteria 13396
120 Ga0207425_1020358 3300025245 Bacteria 1419
121 Ga0209646_1000001 3300025246 Bacteria 3092932
122 Ga0209026_1000073 3300025250 Bacteria 205399
123 Ga0209677_100092 3300025253 Bacteria 102482
124 Ga0209148_1004573 3300025254 Bacteria 3370
125 Ga0209759_1000013 3300025256 Bacteria 399300
126 Ga0209759_1000936 3300025256 Bacteria 21031
127 Ga0209565_1000028 3300025263 Bacteria 348536
128 Ga0209565_1000573 3300025263 Bacteria 24963
129 Ga0209455_1000030 3300025272 Bacteria 533479
130 Ga0209673_1000035 3300025273 Bacteria 328411
131 Ga0209130_1000052 3300025284 Bacteria 216971
132 Ga0209130_1000112 3300025284 Bacteria 131607
133 Ga0209675_1000584 3300025291 Bacteria 26307
134 Ga0209675_1001106 3300025291 Bacteria 16496
135 Ga0209676_1000069 3300025292 Bacteria 312462
136 Ga0209676_1025138 3300025292 Bacteria 1915
137 Ga0209025_1003111 3300025294 Bacteria 16264
138 Ga0209025_1004613 3300025294 Bacteria 11788
139 Ga0209025_1015029 3300025294 Bacteria 4703
140 Ga0209025_1016767 3300025294 Bacteria 4288
141 Ga0209025_1026159 3300025294 Bacteria 2939
142 Ga0209564_1000120 3300025295 Bacteria 204226
143 Ga0209564_1001926 3300025295 Bacteria 18526
144 Ga0209564_1015678 3300025295 Bacteria 3066
145 Ga0209758_1007592 3300025297 Bacteria 7323
146 Ga0209050_1000023 3300025298 Bacteria 537172
147 Ga0209050_1009689 3300025298 Bacteria 4885
148 Ga0209256_1000003 3300025299 Bacteria 1661127
149 Ga0207426_1000153 3300025302 Bacteria 182839
150 Ga0207426_1001955 3300025302 Bacteria 14690
151 Ga0209051_1000017 3300025303 Bacteria 537172
152 Ga0209051_1003673 3300025303 Bacteria 9927
153 Ga0209257_1000041 3300025304 Bacteria 537172
154 Ga0207705_10070340 3300025909 Bacteria 2536
155 Ga0207684_10028330 3300025910 Unclassified 4772
156 Ga0207684_10138493 3300025910 Bacteria 2091
157 Ga0207654_10017949 3300025911 Bacteria 3708
158 Ga0207654_10202080 3300025911 Bacteria 1309
159 Ga0207695_10024843 3300025913 Bacteria 6725
160 Ga0207646_10014452 3300025922 Bacteria 7497
161 Ga0207646_10328527 3300025922 Bacteria 1382
162 Ga0207687_10491616 3300025927 Bacteria 1023
163 Ga0207706_10001218 3300025933 Bacteria 26011
164 Ga0207686_10083944 3300025934 Bacteria 2086
165 Ga0207709_10007576 3300025935 Bacteria 6030
166 Ga0207709_10247109 3300025935 Bacteria 1301
167 Ga0207711_10687782 3300025941 Bacteria 954
168 Ga0207689_10069135 3300025942 Bacteria 2901
169 Ga0207667_10078584 3300025949 Bacteria 3419
170 Ga0207667_10268607 3300025949 Bacteria 1744
171 Ga0207651_10002599 3300025960 Bacteria 8636
172 Ga0207677_10074054 3300026023 Bacteria 2414
173 Ga0207702_10591786 3300026078 Bacteria 1088
174 Ga0207641_10277056 3300026088 Bacteria 1576
175 Ga0207648_10000060 3300026089 Bacteria 102225
176 Ga0207674_10538463 3300026116 Bacteria 1128
177 Ga0207698_10012366 3300026142 Bacteria 5581
178 Ga0207428_10493494 3300027907 Bacteria 890
179 Ga0268266_10081207 3300028379 Bacteria 2826
180 Ga0307515_10098105 3300028794 Bacteria 3572
181 Ga0307513_10000915 3300031456 Bacteria 42641
182 Ga0307513_10039320 3300031456 Bacteria 5245
183 Ga0307408_100008267 3300031548 Bacteria 6868
184 Ga0307408_100630658 3300031548 Bacteria 956
185 Ga0307514_10009816 3300031649 Bacteria 8027
186 Ga0307516_10002796 3300031730 Bacteria 23020
187 Ga0307406_10298715 3300031901 Bacteria 1236
188 Ga0307412_10024773 3300031911 Bacteria 3708
189 Ga0307412_10058837 3300031911 Bacteria 2573
190 Ga0307409_100736040 3300031995 Bacteria 989
191 Ga0373931_0241808 3300035691 Bacteria 1094
192 Ga0395900_0267082 3300037418 Bacteria 1707
193 Ga0395898_0037709 3300037466 Bacteria 4793
194 Ga0395898_0059445 3300037466 Bacteria 3718
195 Ga0395905_0188886 3300037471 Bacteria 1933
196 Ga0395901_0072821 3300038443 Bacteria 3582
197 Ga0451853_0090119 3300041512 Bacteria 2162
198 Ga0439464_0013320 3300042439 Bacteria 2201
199 Ga0451577_0003877 3300042876 Bacteria 16213
200 Ga0466969_0005620 3300044656 Bacteria 6666
201 Ga0466969_0010501 3300044656 Bacteria 4909
202 Ga0466969_0050167 3300044656 Bacteria 2057
203 Ga0466969_0134301 3300044656 Bacteria 1146
204 Ga0466972_0001553 3300044658 Bacteria 11191
205 Ga0466965_0006448 3300044683 Bacteria 5331
206 Ga0466965_0023743 3300044683 Bacteria 2961
207 Ga0466965_0142754 3300044683 Bacteria 1248
208 Ga0466966_0003937 3300044684 Bacteria 9805
209 Ga0466966_0005046 3300044684 Bacteria 8679
210 Ga0466966_0030078 3300044684 Bacteria 3528
211 Ga0466961_0006996 3300044693 Bacteria 7178
212 Ga0466961_0009341 3300044693 Bacteria 6246
213 Ga0466961_0043227 3300044693 Bacteria 2886
214 Ga0466963_0006724 3300044694 Bacteria 6830
215 Ga0466964_0128686 3300044706 Bacteria 1150
216 Ga0466971_0024785 3300044719 Bacteria 2677
217 Ga0466970_0019962 3300044765 Bacteria 3478
218 Ga0466970_0037287 3300044765 Bacteria 2577
219 Ga0466970_0046971 3300044765 Bacteria 2300
220 Ga0466970_0061897 3300044765 Bacteria 2006
221 Ga0466957_0011075 3300044842 Bacteria 5190
222 Ga0466957_0035421 3300044842 Bacteria 2995
223 Ga0466957_0138733 3300044842 Bacteria 1565
224 Ga0466960_0049037 3300044901 Bacteria 2031
225 Ga0466959_0020228 3300045049 Bacteria 4900
226 Ga0466959_0031327 3300045049 Bacteria 3935
227 Ga0466959_0054141 3300045049 Bacteria 2932
228 Ga0466959_0096022 3300045049 Bacteria 2125
229 Ga0466967_0070711 3300045976 Bacteria 3122
230 Ga0466967_0997964 3300045976 Bacteria 833
231 Ga0495650_0009608 3300046471 Bacteria 5484
232 Ga0495585_0028091 3300046492 Bacteria 3210
233 Ga0496121_0020452 3300048924 Bacteria 6551
234 Ga0501290_006002 3300049513 Bacteria 1516
235 Ga0501031_0167913 3300049568 Bacteria 1434
236 Ga0501032_0245936 3300049569 Bacteria 1162
237 Ga0501033_0048502 3300049570 Bacteria 3154
238 Ga0501036_0426849 3300049572 Bacteria 1105
239 Ga0501037_0023442 3300049573 Bacteria 4563
240 Ga0501038_0374297 3300049574 Bacteria 1106
241 Ga0501039_0077451 3300049575 Bacteria 2586
242 Ga0501039_0225825 3300049575 Bacteria 1472
243 Ga0501040_0116526 3300049576 Bacteria 1872
244 Ga0501041_0404299 3300049577 Bacteria 865
245 Ga0501042_0415435 3300049578 Bacteria 975
246 Ga0501046_0263676 3300049580 Bacteria 1265
247 Ga0501046_0400051 3300049580 Bacteria 992
248 Ga0501068_0169003 3300049584 Bacteria 1380
249 Ga0501068_0440419 3300049584 Bacteria 842
250 Ga0501071_0379238 3300049587 Bacteria 1078
251 Ga0501072_0082138 3300049588 Bacteria 2555
252 Ga0501072_0115973 3300049588 Bacteria 2133
253 Ga0501072_0212404 3300049588 Bacteria 1542
254 Ga0501074_0044059 3300049590 Bacteria 3231
255 Ga0501075_0075710 3300049591 Bacteria 2545
256 Ga0501076_0004922 3300049592 Bacteria 9559
257 Ga0501076_0047206 3300049592 Bacteria 3404
258 Ga0501076_0296242 3300049592 Bacteria 1326
259 Ga0501079_0041939 3300049741 Bacteria 3534
260 Ga0501079_0245745 3300049741 Bacteria 1398
261 Ga0501079_0502935 3300049741 Bacteria 953
262 Ga0501080_0267559 3300049742 Bacteria 1556
263 Ga0501081_0187558 3300049743 Bacteria 1497
264 Ga0501081_0235198 3300049743 Bacteria 1335
265 Ga0501035_0523757 3300049822 Bacteria 974
266 Ga0501045_0054589 3300049824 Bacteria 2921
267 Ga0501045_0278957 3300049824 Bacteria 1244
268 Ga0501045_0405845 3300049824 Bacteria 1014
269 nmdc:mga0yw44_99252_c1 3300050492 Bacteria 1852
270 nmdc:mga0k408_118083_c1 3300050493 Bacteria 1570
271 nmdc:mga0k408_175554_c1 3300050493 Bacteria 912
272 nmdc:mga05p37_115039_c1 3300050507 Bacteria 3307
273 nmdc:mga05p37_133468_c1 3300050507 Bacteria 3046
274 nmdc:mga05p37_26274_c1 3300050507 Bacteria 7081
275 nmdc:mga05p37_86916_c1 3300050507 Bacteria 3854
276 nmdc:mga09592_31604_c1 3300050508 Bacteria 4412
277 nmdc:mga0qj67_254433_c1 3300050509 Bacteria 1425
278 nmdc:mga0qj67_329414_c1 3300050509 Bacteria 1236
279 nmdc:mga06r32_19781_c1 3300050510 Bacteria 6187
280 nmdc:mga06r32_356456_c1 3300050510 Unclassified 1447
281 nmdc:mga06r32_778102_c1 3300050510 Bacteria 919
282 nmdc:mga08y16_509938_c1 3300050511 Unclassified 1221
283 nmdc:mga0n895_47060_c1 3300050512 Bacteria 4216
284 nmdc:mga0n895_52809_c1 3300050512 Bacteria 3991
285 nmdc:mga0n895_69007_c1 3300050512 Bacteria 3502
286 nmdc:mga0rr50_22118_c1 3300050513 Bacteria 4357
287 nmdc:mga0rr50_909_c1 3300050513 Bacteria 16008
288 nmdc:mga08x19_2344_c1 3300050514 Bacteria 11498
289 nmdc:mga0a205_118581_c1 3300050515 Bacteria 2545
290 nmdc:mga0a205_51887_c1 3300050515 Bacteria 3959
291 nmdc:mga0a205_8898_c1 3300050515 Bacteria 9151
292 Ga0500644_0005435 3300053088 Bacteria 3218
293 Ga0500593_003678 3300053117 Bacteria 5837
294 Ga0500628_002344 3300053129 Bacteria 3135
295 Ga0500564_051607 3300053138 Bacteria 1881
296 Ga0500627_0016980 3300053158 Bacteria 2851
297 Ga0501084_0222157 3300054114 Bacteria 1594
298 Ga0501084_0586540 3300054114 Bacteria 942
299 Ga0501084_0631445 3300054114 Bacteria 904
300 Ga0500661_015919 3300055283 Bacteria 1347
301 Ga0501082_0056839 3300060353 Bacteria 3371
302 Ga0501082_0617214 3300060353 Bacteria 949
303 Ga0466962_0009870 3300061719 Bacteria 4579
304 Ga0466962_0041115 3300061719 Bacteria 2212
305 Ga0466962_0090412 3300061719 Bacteria 1466
306 Ga0530510_0005107 3300061734 Bacteria 9052
307 Ga0530510_0084956 3300061734 Bacteria 2305
308 Ga0530510_0247861 3300061734 Bacteria 1327
309 2511245170 2511231002 Bacteria 5042903
310 2554815566 2554235132 Bacteria 6772433
311 2608383867 2606217733 Bacteria 6360972
312 2643741930 2643221544 Bacteria 5886209
313 2643991398 2643221596 Bacteria 5006805
314 2644076724 2643221611 Bacteria 6820941
315 2719389236 2718217927 Bacteria 6972593
316 2721402001 2718218423 Bacteria 6438183
317 2724035834 2721755809 Bacteria 6438790
318 2791912387 2791354901 Bacteria 8322202
319 2793299905 2791355256 Bacteria 6798008
320 2793338452 2791355262 Bacteria 6774204
321 2838675234 2838668709 Bacteria 6671819
322 2838707600 2838701080 Bacteria 6669771
323 2842152151 2842146304 Bacteria 5957337
324 2842257373 2842250916 Bacteria 6579627
325 2842402331 2842395702 Bacteria 6780583
326 2919705216 2919704043 Bacteria 5560311
327 2939636069 2939631187 Bacteria 6118131
328 3006829290 3006826541 Bacteria 4678913
329 8005277577 8005275841 Bacteria 6929066
330 8018181747 8018176218 Bacteria 6896178
331 JGI25150J39212_1001573
332 JGI25155J39150_1000071
333 JGI25156J39149_1000071
334 JGI25156J39149_1000097
335 JGI25156J39149_1011546
336 JGI25154J39366_1000093
337 JGI25157J39369_1000088
338 JGI25159J45721_1001801
339 JGI25151J46595_10010638
340 JGI25151J46595_10018561
341 rootH1_10010099
342 rootH2_10011840
343 rootL2_10045917
344 rootH1_10050453
345 rootH1_10105393
346 JGI25160J50197_1000783
347 JGI25161J50226_1000008
348 Ga0055539_1000277
349 Ga0055533_1000026
350 Ga0055535_1000056
351 Ga0055529_1000165
352 Ga0055526_1001317
353 Ga0055526_1001347
354 Ga0055526_1015625
355 Ga0055526_1018792
356 Ga0055537_1000396
357 Ga0055524_1000057
358 Ga0055524_1000126
359 Ga0055536_1001371
360 Ga0055534_1010933
361 Ga0055528_1001958
362 Ga0055530_10004048
363 Ga0055540_1000021
364 Ga0055540_1000158
365 Ga0055540_1023468
366 Ga0055531_10001425
367 Ga0055543_1001180
368 Ga0055543_1001695
369 Ga0065165_1000496
370 Ga0068868_100103485
371 Ga0070673_100002753
372 Ga0070711_100451272
373 Ga0070708_100107537
374 Ga0070662_100000931
375 Ga0068867_100000018
376 Ga0070706_100083613
377 Ga0070707_100316245
378 Ga0070698_100044414
379 Ga0070699_100050993
380 Ga0070699_100358203
381 Ga0070697_100100189
382 Ga0070665_100149811
383 Ga0068855_100043418
384 Ga0068855_100160201
385 Ga0068855_100584062
386 Ga0068856_100030960
387 Ga0068852_100011006
388 Ga0068863_100104499
389 Ga0068863_100553955
390 Ga0081455_10001103
391 Ga0081455_10001975
392 Ga0081455_10097000
393 Ga0081538_10060990
394 Ga0081538_10092330
395 Ga0075365_10224411
396 Ga0075365_10357412
397 Ga0075432_10034655
398 Ga0070712_100004446
399 Ga0075362_10009960
400 Ga0075366_10146174
401 Ga0075366_10232673
402 Ga0075370_10278874
403 Ga0075428_100005640
404 Ga0075428_100220260
405 Ga0075430_100315916
406 Ga0075431_100085617
407 Ga0075431_100172719
408 Ga0075433_10005809
409 Ga0075433_10015734
410 Ga0075433_10025530
411 Ga0075434_100040743
412 Ga0075434_100056998
413 Ga0075429_100005170
414 Ga0075429_100162226
415 Ga0075429_100363591
416 Ga0075436_100112352
417 Ga0075435_100107743
418 Ga0075435_100118276
419 Ga0105240_10013955
420 Ga0111539_10218244
421 Ga0111539_10852080
422 Ga0105245_10070273
423 Ga0105245_10548708
424 Ga0105247_10255041
425 Ga0114129_10021656
426 Ga0114129_10023516
427 Ga0114129_10139077
428 Ga0114129_10244361
429 Ga0105243_10014188
430 Ga0105243_10079532
431 Ga0105241_10053397
432 Ga0105241_10073996
433 Ga0105242_10269901
434 Ga0105248_10355253
435 Ga0105246_10071545
436 Ga0157369_10459835
437 Ga0157378_10151119
438 Ga0157378_10201306
439 Ga0157372_10846916
440 Ga0157377_10000051
441 Ga0157379_10043115
442 Ga0209435_100014
443 Ga0209436_104090
444 Ga0209674_100024
445 Ga0209563_100069
446 Ga0207427_102991
447 Ga0209258_100071
448 Ga0207425_1000985
449 Ga0207425_1020358
450 Ga0209646_1000001
451 Ga0209026_1000073
452 Ga0209677_100092
453 Ga0209148_1004573
454 Ga0209759_1000013
455 Ga0209759_1000936
456 Ga0209565_1000028
457 Ga0209565_1000573
458 Ga0209455_1000030
459 Ga0209673_1000035
460 Ga0209130_1000052
461 Ga0209130_1000112
462 Ga0209675_1000584
463 Ga0209675_1001106
464 Ga0209676_1000069
465 Ga0209676_1025138
466 Ga0209025_1003111
467 Ga0209025_1004613
468 Ga0209025_1015029
469 Ga0209025_1016767
470 Ga0209025_1026159
471 Ga0209564_1000120
472 Ga0209564_1001926
473 Ga0209564_1015678
474 Ga0209758_1007592
475 Ga0209050_1000023
476 Ga0209050_1009689
477 Ga0209256_1000003
478 Ga0207426_1000153
479 Ga0207426_1001955
480 Ga0209051_1000017
481 Ga0209051_1003673
482 Ga0209257_1000041
483 Ga0207705_10070340
484 Ga0207684_10028330
485 Ga0207684_10138493
486 Ga0207654_10017949
487 Ga0207654_10202080
488 Ga0207695_10024843
489 Ga0207646_10014452
490 Ga0207646_10328527
491 Ga0207687_10491616
492 Ga0207706_10001218
493 Ga0207686_10083944
494 Ga0207709_10007576
495 Ga0207709_10247109
496 Ga0207711_10687782
497 Ga0207689_10069135
498 Ga0207667_10078584
499 Ga0207667_10268607
500 Ga0207651_10002599
501 Ga0207677_10074054
502 Ga0207702_10591786
503 Ga0207641_10277056
504 Ga0207648_10000060
505 Ga0207674_10538463
506 Ga0207698_10012366
507 Ga0207428_10493494
508 Ga0268266_10081207
509 Ga0307515_10098105
510 Ga0307513_10000915
511 Ga0307513_10039320
512 Ga0307408_100008267
513 Ga0307408_100630658
514 Ga0307514_10009816
515 Ga0307516_10002796
516 Ga0307406_10298715
517 Ga0307412_10024773
518 Ga0307412_10058837
519 Ga0307409_100736040
520 Ga0373931_0241808
521 Ga0395900_0267082
522 Ga0395898_0037709
523 Ga0395898_0059445
524 Ga0395905_0188886
525 Ga0395901_0072821
526 Ga0451853_0090119
527 Ga0439464_0013320
528 Ga0451577_0003877
529 Ga0466969_0005620
530 Ga0466969_0010501
531 Ga0466969_0050167
532 Ga0466969_0134301
533 Ga0466972_0001553
534 Ga0466965_0006448
535 Ga0466965_0023743
536 Ga0466965_0142754
537 Ga0466966_0003937
538 Ga0466966_0005046
539 Ga0466966_0030078
540 Ga0466961_0006996
541 Ga0466961_0009341
542 Ga0466961_0043227
543 Ga0466963_0006724
544 Ga0466964_0128686
545 Ga0466971_0024785
546 Ga0466970_0019962
547 Ga0466970_0037287
548 Ga0466970_0046971
549 Ga0466970_0061897
550 Ga0466957_0011075
551 Ga0466957_0035421
552 Ga0466957_0138733
553 Ga0466960_0049037
554 Ga0466959_0020228
555 Ga0466959_0031327
556 Ga0466959_0054141
557 Ga0466959_0096022
558 Ga0466967_0070711
559 Ga0466967_0997964
560 Ga0495650_0009608
561 Ga0495585_0028091
562 Ga0496121_0020452
563 Ga0501290_006002
564 Ga0501031_0167913
565 Ga0501032_0245936
566 Ga0501033_0048502
567 Ga0501036_0426849
568 Ga0501037_0023442
569 Ga0501038_0374297
570 Ga0501039_0077451
571 Ga0501039_0225825
572 Ga0501040_0116526
573 Ga0501041_0404299
574 Ga0501042_0415435
575 Ga0501046_0263676
576 Ga0501046_0400051
577 Ga0501068_0169003
578 Ga0501068_0440419
579 Ga0501071_0379238
580 Ga0501072_0082138
581 Ga0501072_0115973
582 Ga0501072_0212404
583 Ga0501074_0044059
584 Ga0501075_0075710
585 Ga0501076_0004922
586 Ga0501076_0047206
587 Ga0501076_0296242
588 Ga0501079_0041939
589 Ga0501079_0245745
590 Ga0501079_0502935
591 Ga0501080_0267559
592 Ga0501081_0187558
593 Ga0501081_0235198
594 Ga0501035_0523757
595 Ga0501045_0054589
596 Ga0501045_0278957
597 Ga0501045_0405845
598 nmdc:mga0yw44_99252_c1
599 nmdc:mga0k408_118083_c1
600 nmdc:mga0k408_175554_c1
601 nmdc:mga05p37_115039_c1
602 nmdc:mga05p37_133468_c1
603 nmdc:mga05p37_26274_c1
604 nmdc:mga05p37_86916_c1
605 nmdc:mga09592_31604_c1
606 nmdc:mga0qj67_254433_c1
607 nmdc:mga0qj67_329414_c1
608 nmdc:mga06r32_19781_c1
609 nmdc:mga06r32_356456_c1
610 nmdc:mga06r32_778102_c1
611 nmdc:mga08y16_509938_c1
612 nmdc:mga0n895_47060_c1
613 nmdc:mga0n895_52809_c1
614 nmdc:mga0n895_69007_c1
615 nmdc:mga0rr50_22118_c1
616 nmdc:mga0rr50_909_c1
617 nmdc:mga08x19_2344_c1
618 nmdc:mga0a205_118581_c1
619 nmdc:mga0a205_51887_c1
620 nmdc:mga0a205_8898_c1
621 Ga0500644_0005435
622 Ga0500593_003678
623 Ga0500628_002344
624 Ga0500564_051607
625 Ga0500627_0016980
626 Ga0501084_0222157
627 Ga0501084_0586540
628 Ga0501084_0631445
629 Ga0500661_015919
630 Ga0501082_0056839
631 Ga0501082_0617214
632 Ga0466962_0009870
633 Ga0466962_0041115
634 Ga0466962_0090412
635 Ga0530510_0005107
636 Ga0530510_0084956
637 Ga0530510_0247861
638 2511245170
639 2554815566
640 2608383867
641 2643741930
642 2643991398
643 2644076724
644 2719389236
645 2721402001
646 2724035834
647 2791912387
648 2793299905
649 2793338452
650 2838675234
651 2838707600
652 2842152151
653 2842257373
654 2842402331
655 2919705216
656 2939636069
657 3006829290
658 8005277577
659 8018181747

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07286

D-Glu_cyclase

D-glutamate cyclase

138

280

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
3db9-assembly1.cif.gz_A crystal structure of upf0317 protein atu3911 from agrobacterium tumefaciens. northeast strcutural genomics target atr186 0.968 8 254
2pif-assembly1.cif.gz_A crystal structure of upf0317 protein pspto_5379 from pseudomonas syringae pv. tomato. northeast structural genomics target psr181 0.9428 8 253
3db9-assembly1.cif.gz_A crystal structure of upf0317 protein atu3911 from agrobacterium tumefaciens. northeast strcutural genomics target atr186 0.9315 8 254
2pif-assembly1.cif.gz_A crystal structure of upf0317 protein pspto_5379 from pseudomonas syringae pv. tomato. northeast structural genomics target psr181 0.9068 8 253
5drk-assembly1.cif.gz_A 2.3 angstrom structure of cpii, a nitrogen regulatory pii-like protein from thiomonas intermedia k12, bound to adp, amp and bicarbonate. 0.5551 32 114
ID Description Score Start End Superfamily
2pifB02 Alpha Beta;2-Layer Sandwich;PSTPO5379-like fold;PSTPO5379-like domain 0.9674 121 231 3.30.2040.10
3db9A01 Alpha Beta;3-Layer(aba) Sandwich;PSTPO5379-like;PSTPO5379-like 0.9601 8 254 3.40.1640.10
af_Q09674_163_275_3.30.2040.10 Alpha Beta;2-Layer Sandwich;PSTPO5379-like fold;PSTPO5379-like domain 0.9575 123 231 3.30.2040.10
af_Q09674_48_155_3.40.1640.10 Alpha Beta;3-Layer(aba) Sandwich;PSTPO5379-like;PSTPO5379-like 0.9571 12 114 3.40.1640.10
2pifB02 Alpha Beta;2-Layer Sandwich;PSTPO5379-like fold;PSTPO5379-like domain 0.9409 121 231 3.30.2040.10
ID Description Score Start End GO Terms
AF-A0A0M2SFE2-F1-model_v4 DUF1445 domain-containing protein 0.9897 8 204 GO:0016829
AF-A0A426V5L2-F1-model_v4 Putative hydro-lyase 0.9894 8 255 GO:0016829
AF-A0A7K2NRZ9-F1-model_v4 Putative hydro-lyase 0.9893 8 222 GO:0016829
AF-A0A269U1H2-F1-model_v4 deleted 0.9892 8 235
AF-A0A4Q2LBT1-F1-model_v4 deleted 0.9884 14 115

Map