F409498

General Info

Members Datasets Scaffolds Average Seq Length
329 243 658 684

Family's Representative Sequence

Representative Sequence 3300003187|JGI25151J46595_10000036|JGI25151J46595_1000003661
Length 757
Sequence MDAQREETSATEPPLPSGERDGVRAGVALRRFPARLATLIRQRSALPPSPPRGERKRPRRYRQMKIAAAGLGIAAIAGATTLLLYARSLPPLDLAAAADRSTVVLDREGKLLRPFLTADGRWKLPVTSEDVDPRYLAMLKAFEDKRFDGHRGIDPLGILRAAAQMLINGRVVSGGSTLTMQVARLLEPREERTLAAKLRQAVRAVELERRFDKAGILDLYLTLAPFGGNLEGVRAASFAYFGKEPKRLSTAEAALLVALPQSPETRRPDRFVEAARKARERVLERVEQAGLATRDEVAAARNEPIPIARRPFPNLSPHIAEQAVAEAPAERVQKLSLDARLQTALEGLARERSLGLAPQVSIAILAVDNETGEIRASVGGVDYFAAERAGALDLTRALRSPGSALKPFIYALAFDNGIAHPETMLEDRPARYGIYIPENFDMTFQGMVSARKALQLSLNVPAVELLSALGPQRFLSRLRDAGVAIAMPKDSGAPGLAVGLGGLGITLQDLTRAYVGLARGGEMLPLRFRPVSAPLSPQDEGSRGGARLVDPVAAWYVADTLLGAPPPLNAVPGRIAYKTGTSYGYRDAWAVGFDRKHTIGVWVGRADNGAVPGLVGRTVAAPILFDAFARLGIDPRPFPQPADAIVASTGHLPPPLRHLRQDVPKTVTAMTTPTLKLAFPPDGARIDLSAAALDGNARLNLKVAGGSPPYTWLVDGTPVTDPQRRRETQWQPPGKGFMRISVIDATGASESVSVRLQ

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
29 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
30 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
31 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
64 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
67 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
68 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
69 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
70 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
166 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
167 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
170 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
171 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
172 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
173 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
184 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
185 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
186 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
187 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
188 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
189 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
190 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
191 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
192 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
193 2643221583 Caulobacter sp. Root655 Isolate Unclassified
194 2643221584 Caulobacter sp. Root656 Isolate Unclassified
195 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
196 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
197 2643221629 Devosia sp. Root105 Isolate Unclassified
198 2643221640 Caulobacter sp. Root342 Isolate Unclassified
199 2643221642 Caulobacter sp. Root343 Isolate Unclassified
200 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
201 2643221662 Devosia sp. Root413D1 Isolate Unclassified
202 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
203 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
204 2643221733 Bosea sp. Root381 Isolate Unclassified
205 2643221734 Bosea sp. Root670 Isolate Unclassified
206 2643221736 Bosea sp. Root483D1 Isolate Unclassified
207 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
208 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
209 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
210 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
211 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
212 2818991435 Caulobacter henricii 536 Isolate Unclassified
213 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
214 2818991467 Bosea vestrisii 3192 Isolate Unclassified
215 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
216 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
217 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
218 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
219 2841760612 Bosea sp. Tri-49 Isolate Nodule
220 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
221 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
222 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
223 2844104063 Bosea sp. Tri-39 Isolate Nodule
224 2851182111 Bosea sp. Tri-44 Isolate Nodule
225 2851246043 Bosea sp. Tri-54 Isolate Nodule
226 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
227 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
228 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
229 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
230 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
231 2902330777 Methylobacterium sp. 2A Isolate Unclassified
232 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
233 2909042592 Labrys sp. LIt4 Isolate Nodule
234 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
235 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
236 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
237 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
238 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
239 641522639 Methylobacterium sp. 4-46 Isolate Nodule
240 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
241 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
242 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
243 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.46
Metatranscriptomes 0
Isolates 18.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.93
Nodule 3.65
Rhizoplane 3.65
Rhizosphere 58.66
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000036 3300003187 Bacteria 188770
2 Ga0055526_1000499 3300003771 Bacteria 31221
3 Ga0055526_1002477 3300003771 Bacteria 12475
4 Ga0055524_1000065 3300003775 Bacteria 132117
5 Ga0055524_1012143 3300003775 Bacteria 3323
6 Ga0055536_1000400 3300003781 Bacteria 31537
7 Ga0055536_1000401 3300003781 Bacteria 31535
8 Ga0055528_1009691 3300003790 Bacteria 4002
9 Ga0055530_10002443 3300003791 Bacteria 11970
10 Ga0055530_10003764 3300003791 Bacteria 8370
11 Ga0055531_10000369 3300003794 Bacteria 43448
12 Ga0055531_10001568 3300003794 Bacteria 16729
13 Ga0065165_1000014 3300005262 Bacteria 292366
14 Ga0065165_1000345 3300005262 Bacteria 76072
15 Ga0070658_10021238 3300005327 Bacteria 5201
16 Ga0070658_10088404 3300005327 Bacteria 2551
17 Ga0070660_100013398 3300005339 Bacteria 5883
18 Ga0070689_100000401 3300005340 Bacteria 25434
19 Ga0070668_100047794 3300005347 Bacteria 3290
20 Ga0070659_100046231 3300005366 Bacteria 3412
21 Ga0070678_100023425 3300005456 Bacteria 4114
22 Ga0070681_10007116 3300005458 Bacteria 10897
23 Ga0070685_10027615 3300005466 Bacteria 3139
24 Ga0070707_100006546 3300005468 Bacteria 10812
25 Ga0070679_100147705 3300005530 Bacteria 2328
26 Ga0068853_100030569 3300005539 Bacteria 4550
27 Ga0070665_100000246 3300005548 Bacteria 90170
28 Ga0068856_100066376 3300005614 Bacteria 3565
29 Ga0081540_1000766 3300005983 Bacteria 29582
30 Ga0075369_10009231 3300006186 Bacteria 3825
31 Ga0075370_10007665 3300006353 Bacteria 5510
32 Ga0075428_100101844 3300006844 Bacteria 3131
33 Ga0105240_10004843 3300009093 Bacteria 20283
34 Ga0105240_10094794 3300009093 Bacteria 3640
35 Ga0157370_10054058 3300013104 Bacteria 3828
36 Ga0171462_1007 3300013250 Bacteria 417698
37 Ga0183365_10001 3300015684 Bacteria 2090444
38 Ga0213873_10006833 3300021358 Bacteria 2261
39 Ga0213872_10007145 3300021361 Bacteria 5521
40 Ga0213876_10000742 3300021384 Bacteria 22592
41 Ga0213876_10025775 3300021384 Bacteria 3100
42 Ga0209233_1000290 3300025261 Bacteria 64394
43 Ga0209565_1000192 3300025263 Bacteria 74812
44 Ga0209565_1000416 3300025263 Bacteria 35062
45 Ga0209673_1002928 3300025273 Bacteria 10742
46 Ga0209130_1000024 3300025284 Bacteria 354212
47 Ga0209675_1005191 3300025291 Bacteria 5526
48 Ga0209676_1000308 3300025292 Bacteria 95847
49 Ga0209676_1000320 3300025292 Bacteria 93515
50 Ga0209025_1000017 3300025294 Bacteria 768983
51 Ga0209025_1002034 3300025294 Bacteria 23078
52 Ga0209025_1016943 3300025294 Bacteria 4247
53 Ga0209564_1000044 3300025295 Bacteria 381017
54 Ga0209564_1000059 3300025295 Bacteria 328782
55 Ga0209564_1002796 3300025295 Bacteria 13026
56 Ga0209758_1000917 3300025297 Bacteria 39944
57 Ga0209758_1008793 3300025297 Bacteria 6438
58 Ga0209050_1000466 3300025298 Bacteria 71734
59 Ga0209050_1001249 3300025298 Bacteria 29373
60 Ga0209256_1000033 3300025299 Bacteria 393924
61 Ga0209256_1000730 3300025299 Bacteria 43445
62 Ga0209256_1000810 3300025299 Bacteria 40058
63 Ga0209256_1002347 3300025299 Bacteria 15761
64 Ga0209051_1001303 3300025303 Bacteria 21951
65 Ga0209257_1000338 3300025304 Bacteria 97721
66 Ga0209257_1000554 3300025304 Bacteria 64085
67 Ga0207695_10029257 3300025913 Bacteria 6093
68 Ga0207695_10043847 3300025913 Bacteria 4762
69 Ga0207657_10022179 3300025919 Bacteria 5955
70 Ga0207646_10011101 3300025922 Bacteria 8745
71 Ga0207670_10029034 3300025936 Bacteria 3519
72 Ga0207667_10032718 3300025949 Bacteria 5598
73 Ga0207683_10029646 3300026121 Bacteria 4738
74 Ga0268266_10000003 3300028379 Bacteria 1701703
75 Ga0307515_10038808 3300028794 Bacteria 7602
76 Ga0307515_10107223 3300028794 Bacteria 3305
77 Ga0265325_10000126 3300031241 Bacteria 52410
78 Ga0265325_10034743 3300031241 Bacteria 2680
79 Ga0265340_10007045 3300031247 Bacteria 6132
80 Ga0265339_10000832 3300031249 Bacteria 23783
81 Ga0265339_10001789 3300031249 Bacteria 15807
82 Ga0265327_10001088 3300031251 Bacteria 37825
83 Ga0265327_10001467 3300031251 Bacteria 29538
84 Ga0307513_10007002 3300031456 Bacteria 14669
85 Ga0316579_10000075 3300031691 Bacteria 25041
86 Ga0265314_10021466 3300031711 Bacteria 4963
87 Ga0265314_10041435 3300031711 Bacteria 3296
88 Ga0265342_10003038 3300031712 Bacteria 14043
89 Ga0316576_10000040 3300031727 Bacteria 38764
90 Ga0316576_10007860 3300031727 Bacteria 6744
91 Ga0316578_10000002 3300031728 Bacteria 56598
92 Ga0316578_10003456 3300031728 Bacteria 7227
93 Ga0316577_10000052 3300031733 Bacteria 27294
94 Ga0316583_10004037 3300032133 Bacteria 5216
95 Ga0316585_10000341 3300032137 Bacteria 10616
96 Ga0316580_10000014 3300032139 Bacteria 26994
97 Ga0373956_0015046 3300035119 Bacteria 3235
98 Ga0373955_0003874 3300035172 Bacteria 6598
99 Ga0316574_0006240 3300035398 Bacteria 6421
100 Ga0316574_0009847 3300035398 Bacteria 5373
101 Ga0316574_0033361 3300035398 Bacteria 3133
102 Ga0373931_0021224 3300035691 Bacteria 3258
103 Ga0373927_0007274 3300035695 Bacteria 7508
104 Ga0373933_0003012 3300035724 Bacteria 9399
105 Ga0373937_0002053 3300036401 Bacteria 16833
106 Ga0316582_0000222 3300036647 Bacteria 18580
107 Ga0316582_0108840 3300036647 Bacteria 1842
108 Ga0316584_0000043 3300036712 Bacteria 45485
109 Ga0316584_0006615 3300036712 Bacteria 7854
110 Ga0316584_0027900 3300036712 Bacteria 4158
111 Ga0395899_0000018 3300037312 Bacteria 423194
112 Ga0395898_0087361 3300037466 Bacteria 3004
113 Ga0395905_0000022 3300037471 Bacteria 321527
114 Ga0436364_0289481 3300037853 Bacteria 2659
115 Ga0400483_105746 3300039062 Bacteria 4473
116 Ga0436365_0260030 3300039437 Bacteria 2427
117 Ga0436365_0843550 3300039437 Bacteria 3630
118 Ga0436365_1389824 3300039437 Bacteria 11448
119 Ga0436365_1607080 3300039437 Bacteria 5418
120 Ga0436365_1778583 3300039437 Bacteria 1933
121 Ga0436361_0135680 3300039447 Bacteria 12581
122 Ga0436362_0675804 3300039453 Bacteria 8331
123 Ga0436362_0857391 3300039453 Bacteria 3120
124 Ga0466969_0000531 3300044656 Bacteria 20971
125 Ga0466966_0001046 3300044684 Bacteria 17660
126 Ga0466961_0041987 3300044693 Bacteria 2932
127 Ga0466971_0003512 3300044719 Bacteria 6698
128 Ga0466959_0000206 3300045049 Bacteria 37971
129 Ga0495627_000906 3300046453 Bacteria 20642
130 Ga0495592_0002960 3300046454 Bacteria 12091
131 Ga0495590_0005965 3300046457 Bacteria 4776
132 Ga0495629_0001814 3300046459 Bacteria 16736
133 Ga0495638_0000185 3300046460 Bacteria 95220
134 Ga0495638_0000639 3300046460 Bacteria 38450
135 Ga0495638_0001344 3300046460 Bacteria 22555
136 Ga0495638_0048040 3300046460 Bacteria 2673
137 Ga0495651_0003970 3300046462 Bacteria 11307
138 Ga0495653_0008874 3300046463 Bacteria 8225
139 Ga0495650_0000262 3300046471 Bacteria 101769
140 Ga0495650_0014102 3300046471 Bacteria 4183
141 Ga0495583_0000003 3300046506 Bacteria 709273
142 Ga0495606_0006146 3300046507 Bacteria 11190
143 Ga0495608_0005129 3300046511 Bacteria 9360
144 Ga0495610_0000524 3300046512 Bacteria 38586
145 Ga0495610_0000985 3300046512 Bacteria 26266
146 Ga0495610_0019271 3300046512 Bacteria 3825
147 Ga0495616_0000016 3300046513 Bacteria 182686
148 Ga0495618_0002499 3300046514 Bacteria 11798
149 Ga0495632_0001248 3300046519 Bacteria 21576
150 Ga0495632_0008659 3300046519 Bacteria 6213
151 Ga0495632_0047619 3300046519 Bacteria 2125
152 Ga0495637_0019841 3300046520 Bacteria 3101
153 Ga0495648_0000191 3300046524 Bacteria 70452
154 Ga0495652_0024550 3300046529 Bacteria 5335
155 Ga0495654_0000777 3300046530 Bacteria 24638
156 Ga0495640_0002191 3300046533 Bacteria 15620
157 Ga0495587_0005648 3300046536 Bacteria 8157
158 Ga0495597_0021334 3300046542 Bacteria 3011
159 Ga0495667_0011058 3300046559 Bacteria 6101
160 Ga0495668_0000196 3300046616 Bacteria 89097
161 Ga0495668_0002187 3300046616 Bacteria 16721
162 Ga0495668_0024413 3300046616 Bacteria 3438
163 Ga0495634_0011701 3300046642 Bacteria 6381
164 Ga0495625_0000152 3300046660 Bacteria 105589
165 Ga0495625_0004176 3300046660 Bacteria 13761
166 Ga0495625_0007245 3300046660 Bacteria 9705
167 Ga0495625_0051935 3300046660 Bacteria 2936
168 Ga0495625_0059508 3300046660 Bacteria 2710
169 Ga0495635_0001228 3300046663 Bacteria 17142
170 Ga0495657_0004536 3300046675 Bacteria 11096
171 Ga0495600_0002376 3300046809 Bacteria 10763
172 Ga0495604_0000915 3300047317 Bacteria 24528
173 Ga0495672_0002259 3300047320 Bacteria 17915
174 Ga0495672_0004566 3300047320 Bacteria 11257
175 Ga0495680_0002971 3300047322 Bacteria 16961
176 Ga0495683_0004303 3300047323 Bacteria 8115
177 Ga0495673_0000312 3300047469 Bacteria 63724
178 Ga0495673_0000433 3300047469 Bacteria 47031
179 Ga0495673_0002154 3300047469 Bacteria 14295
180 Ga0495684_0003026 3300047471 Bacteria 13229
181 Ga0495686_0000233 3300047472 Bacteria 101644
182 Ga0495686_0000850 3300047472 Bacteria 39221
183 Ga0495602_0012467 3300048088 Bacteria 8734
184 Ga0496101_0014603 3300048904 Bacteria 5281
185 Ga0496104_0000051 3300048907 Bacteria 143423
186 Ga0496104_0045335 3300048907 Bacteria 4134
187 Ga0496105_0000043 3300048908 Bacteria 114348
188 Ga0496105_0030324 3300048908 Bacteria 4431
189 Ga0496105_0066943 3300048908 Bacteria 2965
190 Ga0496107_0000209 3300048910 Bacteria 30900
191 Ga0496110_0011504 3300048913 Bacteria 7245
192 Ga0496112_0019733 3300048915 Bacteria 6371
193 Ga0496113_0058015 3300048916 Bacteria 2912
194 Ga0496114_0042411 3300048917 Bacteria 3772
195 Ga0496115_0001829 3300048918 Bacteria 15223
196 Ga0496119_0001459 3300048922 Bacteria 28330
197 Ga0496121_0004173 3300048924 Bacteria 19753
198 Ga0496122_0015250 3300048925 Bacteria 7354
199 Ga0496125_0008090 3300048928 Bacteria 11078
200 Ga0496126_0011104 3300048929 Bacteria 9356
201 Ga0496126_0030024 3300048929 Bacteria 5158
202 Ga0495678_003886 3300049459 Bacteria 8965
203 Ga0501031_0014511 3300049568 Bacteria 5122
204 Ga0501031_0031639 3300049568 Bacteria 3451
205 Ga0501032_0000398 3300049569 Bacteria 35917
206 Ga0501032_0012846 3300049569 Bacteria 5970
207 Ga0501033_0017544 3300049570 Bacteria 5408
208 Ga0501033_0018903 3300049570 Bacteria 5208
209 Ga0501034_0000161 3300049571 Bacteria 126011
210 Ga0501034_0026518 3300049571 Bacteria 5901
211 Ga0501034_0058459 3300049571 Bacteria 3876
212 Ga0501034_0075447 3300049571 Bacteria 3379
213 Ga0501036_0012718 3300049572 Bacteria 6981
214 Ga0501036_0064748 3300049572 Bacteria 3094
215 Ga0501037_0011857 3300049573 Bacteria 6418
216 Ga0501037_0012840 3300049573 Bacteria 6174
217 Ga0501037_0026307 3300049573 Bacteria 4300
218 Ga0501037_0027044 3300049573 Bacteria 4238
219 Ga0501038_0026360 3300049574 Bacteria 5176
220 Ga0501038_0093516 3300049574 Bacteria 2515
221 Ga0501043_0011845 3300049579 Bacteria 6831
222 Ga0501043_0045479 3300049579 Bacteria 3453
223 Ga0501047_0000471 3300049581 Bacteria 43820
224 Ga0501047_0003433 3300049581 Bacteria 14983
225 Ga0501047_0027832 3300049581 Bacteria 5447
226 Ga0501048_0032981 3300049582 Bacteria 3742
227 Ga0501067_0000099 3300049583 Bacteria 49782
228 Ga0501067_0039383 3300049583 Bacteria 2624
229 Ga0501068_0002113 3300049584 Bacteria 10597
230 Ga0501068_0011443 3300049584 Bacteria 5011
231 Ga0501069_0017395 3300049585 Bacteria 3867
232 Ga0501073_0000005 3300049589 Bacteria 237180
233 Ga0501073_0001219 3300049589 Bacteria 18747
234 Ga0501073_0055412 3300049589 Bacteria 2774
235 Ga0501074_0036189 3300049590 Bacteria 3576
236 Ga0501077_0000034 3300049593 Bacteria 69155
237 Ga0501080_0000651 3300049742 Bacteria 27552
238 Ga0501080_0000779 3300049742 Bacteria 25915
239 Ga0501083_0058201 3300049744 Bacteria 2586
240 Ga0501083_0080533 3300049744 Bacteria 2159
241 Ga0501035_0003444 3300049822 Bacteria 15141
242 Ga0501035_0034519 3300049822 Bacteria 4596
243 Ga0501044_0000717 3300049823 Bacteria 39999
244 Ga0501044_0001573 3300049823 Bacteria 26697
245 Ga0501044_0051605 3300049823 Bacteria 4240
246 Ga0501044_0077078 3300049823 Bacteria 3381
247 Ga0501045_0093315 3300049824 Bacteria 2226
248 nmdc:mga0sz30_6391_c1 3300050516 Bacteria 4372
249 Ga0495619_0005578 3300053085 Bacteria 7983
250 Ga0500578_0000015 3300053086 Bacteria 179217
251 Ga0500644_0000058 3300053088 Bacteria 64557
252 Ga0500556_0000300 3300053104 Bacteria 37857
253 Ga0500562_001605 3300053108 Bacteria 5617
254 Ga0500593_001821 3300053117 Bacteria 7658
255 Ga0500608_000040 3300053122 Bacteria 57550
256 Ga0500608_000717 3300053122 Bacteria 12161
257 Ga0500618_000205 3300053125 Bacteria 46863
258 Ga0500652_000114 3300053131 Bacteria 31165
259 Ga0500658_0000956 3300053134 Bacteria 11804
260 Ga0500559_0000277 3300053136 Bacteria 39724
261 Ga0500564_000038 3300053138 Bacteria 36426
262 Ga0500568_0000004 3300053139 Bacteria 621666
263 Ga0500577_0003882 3300053142 Bacteria 3905
264 Ga0500616_0003050 3300053153 Bacteria 13181
265 Ga0500622_0003083 3300053156 Bacteria 11483
266 Ga0500645_002903 3300053730 Bacteria 7316
267 Ga0501082_0014030 3300060353 Bacteria 6893
268 Ga0466962_0033869 3300061719 Bacteria 2444
269 2511122217 2510917020 Bacteria 5657507
270 2523470274 2523231067 Bacteria 5230452
271 2545677297 2545555834 Bacteria 8130841
272 2585149879 2582581279 Bacteria 4980720
273 2585151313 2582581280 Bacteria 5994497
274 2585197182 2582581293 Bacteria 5907401
275 2587915634 2585428106 Bacteria 5179711
276 2596373493 2595698237 Bacteria 6712432
277 2643748105 2643221545 Bacteria 5083237
278 2643781152 2643221552 Bacteria 5708754
279 2643926840 2643221583 Bacteria 5218014
280 2643930485 2643221584 Bacteria 5511711
281 2643998252 2643221598 Bacteria 4578346
282 2644087207 2643221614 Bacteria 4260023
283 2644165530 2643221629 Bacteria 5850260
284 2644223183 2643221640 Bacteria 5258820
285 2644236547 2643221642 Bacteria 5357871
286 2644342160 2643221661 Bacteria 4267604
287 2644349039 2643221662 Bacteria 5851492
288 2644368446 2643221666 Bacteria 4265935
289 2644506887 2643221691 Bacteria 5093099
290 2644730178 2643221733 Bacteria 5690728
291 2644737804 2643221734 Bacteria 5365412
292 2644742967 2643221736 Bacteria 6608466
293 2715500371 2713897090 Bacteria 3353799
294 2738745534 2738541281 Bacteria 5112672
295 2739350311 2738543031 Bacteria 5769731
296 2739354764 2738543032 Bacteria 5115625
297 2739792793 2739367756 Bacteria 4553612
298 2819540213 2818991435 Bacteria 5433759
299 2819649225 2818991454 Bacteria 5563326
300 2819721622 2818991467 Bacteria 5893227
301 2824734897 2824732956 Bacteria 7810675
302 2828309895 2828305725 Bacteria 4916900
303 2829746720 2829745981 Bacteria 5406054
304 2840882113 2840878972 Bacteria 5483153
305 2841765230 2841760612 Bacteria 6454112
306 2841912275 2841911363 Bacteria 6173697
307 2841919956 2841917233 Bacteria 6173500
308 2842699619 2842698319 Bacteria 5190321
309 2844106840 2844104063 Bacteria 6440972
310 2851185814 2851182111 Bacteria 6047226
311 2851248880 2851246043 Bacteria 6439203
312 2855021711 2855020534 Bacteria 3204685
313 2857505551 2857504554 Bacteria 5369913
314 2861695471 2861691609 Bacteria 5628931
315 2884960975 2884960567 Bacteria 5437054
316 2889306911 2889306138 Bacteria 6358934
317 2902336491 2902330777 Bacteria 6395352
318 2902411617 2902405164 Bacteria 6784948
319 2909043536 2909042592 Bacteria 6499737
320 2917557657 2917554339 Bacteria 4987857
321 2917702599 2917699015 Bacteria 7043791
322 2919454497 2919450847 Bacteria 5631160
323 2928128615 2928125067 Bacteria 5937560
324 2928532339 2928531327 Bacteria 5101314
325 641640732 641522639 Bacteria 7737025
326 643599468 643348564 Bacteria 8839022
327 8001848330 8001845381 Bacteria 5804942
328 8054564768 8054563764 Bacteria 5592885
329 8057532765 8057529695 Bacteria 6306553
330 JGI25151J46595_10000036
331 Ga0055526_1000499
332 Ga0055526_1002477
333 Ga0055524_1000065
334 Ga0055524_1012143
335 Ga0055536_1000400
336 Ga0055536_1000401
337 Ga0055528_1009691
338 Ga0055530_10002443
339 Ga0055530_10003764
340 Ga0055531_10000369
341 Ga0055531_10001568
342 Ga0065165_1000014
343 Ga0065165_1000345
344 Ga0070658_10021238
345 Ga0070658_10088404
346 Ga0070660_100013398
347 Ga0070689_100000401
348 Ga0070668_100047794
349 Ga0070659_100046231
350 Ga0070678_100023425
351 Ga0070681_10007116
352 Ga0070685_10027615
353 Ga0070707_100006546
354 Ga0070679_100147705
355 Ga0068853_100030569
356 Ga0070665_100000246
357 Ga0068856_100066376
358 Ga0081540_1000766
359 Ga0075369_10009231
360 Ga0075370_10007665
361 Ga0075428_100101844
362 Ga0105240_10004843
363 Ga0105240_10094794
364 Ga0157370_10054058
365 Ga0171462_1007
366 Ga0183365_10001
367 Ga0213873_10006833
368 Ga0213872_10007145
369 Ga0213876_10000742
370 Ga0213876_10025775
371 Ga0209233_1000290
372 Ga0209565_1000192
373 Ga0209565_1000416
374 Ga0209673_1002928
375 Ga0209130_1000024
376 Ga0209675_1005191
377 Ga0209676_1000308
378 Ga0209676_1000320
379 Ga0209025_1000017
380 Ga0209025_1002034
381 Ga0209025_1016943
382 Ga0209564_1000044
383 Ga0209564_1000059
384 Ga0209564_1002796
385 Ga0209758_1000917
386 Ga0209758_1008793
387 Ga0209050_1000466
388 Ga0209050_1001249
389 Ga0209256_1000033
390 Ga0209256_1000730
391 Ga0209256_1000810
392 Ga0209256_1002347
393 Ga0209051_1001303
394 Ga0209257_1000338
395 Ga0209257_1000554
396 Ga0207695_10029257
397 Ga0207695_10043847
398 Ga0207657_10022179
399 Ga0207646_10011101
400 Ga0207670_10029034
401 Ga0207667_10032718
402 Ga0207683_10029646
403 Ga0268266_10000003
404 Ga0307515_10038808
405 Ga0307515_10107223
406 Ga0265325_10000126
407 Ga0265325_10034743
408 Ga0265340_10007045
409 Ga0265339_10000832
410 Ga0265339_10001789
411 Ga0265327_10001088
412 Ga0265327_10001467
413 Ga0307513_10007002
414 Ga0316579_10000075
415 Ga0265314_10021466
416 Ga0265314_10041435
417 Ga0265342_10003038
418 Ga0316576_10000040
419 Ga0316576_10007860
420 Ga0316578_10000002
421 Ga0316578_10003456
422 Ga0316577_10000052
423 Ga0316583_10004037
424 Ga0316585_10000341
425 Ga0316580_10000014
426 Ga0373956_0015046
427 Ga0373955_0003874
428 Ga0316574_0006240
429 Ga0316574_0009847
430 Ga0316574_0033361
431 Ga0373931_0021224
432 Ga0373927_0007274
433 Ga0373933_0003012
434 Ga0373937_0002053
435 Ga0316582_0000222
436 Ga0316582_0108840
437 Ga0316584_0000043
438 Ga0316584_0006615
439 Ga0316584_0027900
440 Ga0395899_0000018
441 Ga0395898_0087361
442 Ga0395905_0000022
443 Ga0436364_0289481
444 Ga0400483_105746
445 Ga0436365_0260030
446 Ga0436365_0843550
447 Ga0436365_1389824
448 Ga0436365_1607080
449 Ga0436365_1778583
450 Ga0436361_0135680
451 Ga0436362_0675804
452 Ga0436362_0857391
453 Ga0466969_0000531
454 Ga0466966_0001046
455 Ga0466961_0041987
456 Ga0466971_0003512
457 Ga0466959_0000206
458 Ga0495627_000906
459 Ga0495592_0002960
460 Ga0495590_0005965
461 Ga0495629_0001814
462 Ga0495638_0000185
463 Ga0495638_0000639
464 Ga0495638_0001344
465 Ga0495638_0048040
466 Ga0495651_0003970
467 Ga0495653_0008874
468 Ga0495650_0000262
469 Ga0495650_0014102
470 Ga0495583_0000003
471 Ga0495606_0006146
472 Ga0495608_0005129
473 Ga0495610_0000524
474 Ga0495610_0000985
475 Ga0495610_0019271
476 Ga0495616_0000016
477 Ga0495618_0002499
478 Ga0495632_0001248
479 Ga0495632_0008659
480 Ga0495632_0047619
481 Ga0495637_0019841
482 Ga0495648_0000191
483 Ga0495652_0024550
484 Ga0495654_0000777
485 Ga0495640_0002191
486 Ga0495587_0005648
487 Ga0495597_0021334
488 Ga0495667_0011058
489 Ga0495668_0000196
490 Ga0495668_0002187
491 Ga0495668_0024413
492 Ga0495634_0011701
493 Ga0495625_0000152
494 Ga0495625_0004176
495 Ga0495625_0007245
496 Ga0495625_0051935
497 Ga0495625_0059508
498 Ga0495635_0001228
499 Ga0495657_0004536
500 Ga0495600_0002376
501 Ga0495604_0000915
502 Ga0495672_0002259
503 Ga0495672_0004566
504 Ga0495680_0002971
505 Ga0495683_0004303
506 Ga0495673_0000312
507 Ga0495673_0000433
508 Ga0495673_0002154
509 Ga0495684_0003026
510 Ga0495686_0000233
511 Ga0495686_0000850
512 Ga0495602_0012467
513 Ga0496101_0014603
514 Ga0496104_0000051
515 Ga0496104_0045335
516 Ga0496105_0000043
517 Ga0496105_0030324
518 Ga0496105_0066943
519 Ga0496107_0000209
520 Ga0496110_0011504
521 Ga0496112_0019733
522 Ga0496113_0058015
523 Ga0496114_0042411
524 Ga0496115_0001829
525 Ga0496119_0001459
526 Ga0496121_0004173
527 Ga0496122_0015250
528 Ga0496125_0008090
529 Ga0496126_0011104
530 Ga0496126_0030024
531 Ga0495678_003886
532 Ga0501031_0014511
533 Ga0501031_0031639
534 Ga0501032_0000398
535 Ga0501032_0012846
536 Ga0501033_0017544
537 Ga0501033_0018903
538 Ga0501034_0000161
539 Ga0501034_0026518
540 Ga0501034_0058459
541 Ga0501034_0075447
542 Ga0501036_0012718
543 Ga0501036_0064748
544 Ga0501037_0011857
545 Ga0501037_0012840
546 Ga0501037_0026307
547 Ga0501037_0027044
548 Ga0501038_0026360
549 Ga0501038_0093516
550 Ga0501043_0011845
551 Ga0501043_0045479
552 Ga0501047_0000471
553 Ga0501047_0003433
554 Ga0501047_0027832
555 Ga0501048_0032981
556 Ga0501067_0000099
557 Ga0501067_0039383
558 Ga0501068_0002113
559 Ga0501068_0011443
560 Ga0501069_0017395
561 Ga0501073_0000005
562 Ga0501073_0001219
563 Ga0501073_0055412
564 Ga0501074_0036189
565 Ga0501077_0000034
566 Ga0501080_0000651
567 Ga0501080_0000779
568 Ga0501083_0058201
569 Ga0501083_0080533
570 Ga0501035_0003444
571 Ga0501035_0034519
572 Ga0501044_0000717
573 Ga0501044_0001573
574 Ga0501044_0051605
575 Ga0501044_0077078
576 Ga0501045_0093315
577 nmdc:mga0sz30_6391_c1
578 Ga0495619_0005578
579 Ga0500578_0000015
580 Ga0500644_0000058
581 Ga0500556_0000300
582 Ga0500562_001605
583 Ga0500593_001821
584 Ga0500608_000040
585 Ga0500608_000717
586 Ga0500618_000205
587 Ga0500652_000114
588 Ga0500658_0000956
589 Ga0500559_0000277
590 Ga0500564_000038
591 Ga0500568_0000004
592 Ga0500577_0003882
593 Ga0500616_0003050
594 Ga0500622_0003083
595 Ga0500645_002903
596 Ga0501082_0014030
597 Ga0466962_0033869
598 2511122217
599 2523470274
600 2545677297
601 2585149879
602 2585151313
603 2585197182
604 2587915634
605 2596373493
606 2643748105
607 2643781152
608 2643926840
609 2643930485
610 2643998252
611 2644087207
612 2644165530
613 2644223183
614 2644236547
615 2644342160
616 2644349039
617 2644368446
618 2644506887
619 2644730178
620 2644737804
621 2644742967
622 2715500371
623 2738745534
624 2739350311
625 2739354764
626 2739792793
627 2819540213
628 2819649225
629 2819721622
630 2824734897
631 2828309895
632 2829746720
633 2840882113
634 2841765230
635 2841912275
636 2841919956
637 2842699619
638 2844106840
639 2851185814
640 2851248880
641 2855021711
642 2857505551
643 2861695471
644 2884960975
645 2889306911
646 2902336491
647 2902411617
648 2909043536
649 2917557657
650 2917702599
651 2919454497
652 2928128615
653 2928532339
654 641640732
655 643599468
656 8001848330
657 8054564768
658 8057532765

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

108

287

0.95

PF06832

BiPBP_C

Penicillin-Binding Protein C-terminus Family

664

755

0.95

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

362

623

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.917 123 303
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.916 123 303
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.9123 126 303
3nb6-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl neryl moenomycin 0.9016 123 303
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.9012 123 303
ID Description Score Start End Superfamily
af_P76577_56_250_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9351 115 311 1.10.3810.10
af_P76577_56_250_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.926 115 311 1.10.3810.10
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.916 123 303 1.10.3810.10
af_P76577_253_589_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.912 313 647 3.40.710.10
3fwmA02 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9104 118 286 1.10.3810.10
ID Description Score Start End GO Terms
AF-A0A5C8TYM0-F1-model_v4 Penicillin-binding protein 1C 0.9832 378 521 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A7X6EJB5-F1-model_v4 deleted 0.9769 310 455
AF-A0A5C8W851-F1-model_v4 Penicillin-binding protein 1C 0.9739 378 648 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A527CW11-F1-model_v4 Penicillin-binding protein 1C 0.9684 119 252 GO:0008955
GO:0009252
GO:0030288
AF-A0A2G8MLQ6-F1-model_v4 deleted 0.9641 104 507

Map