F409587

General Info

Members Datasets Scaffolds Average Seq Length
329 52 658 63

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100001385|Ga0068855_10000138523
Length 67
Sequence MASLKITLKKSPIGFNKTQKRTAAALGLGKLNKTVLRPDNDQVRGMCRSIEHMLEVEQVEESAKAGK

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
3 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
4 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
5 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
7 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
8 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
9 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
13 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
14 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
15 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
16 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
17 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
18 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
19 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
20 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
21 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
22 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
23 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
24 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
25 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
26 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
27 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
28 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
30 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
31 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
32 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
33 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
34 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
35 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
36 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
37 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
38 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
39 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
40 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
41 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
42 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
43 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
44 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
45 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
47 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
48 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
49 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
50 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
51 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
52 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 68.69
Metatranscriptomes 31
Isolates 0.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 86.32
Stem 0
Stem Tuber 0
Unclassified 12.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100001385 3300005563 Bacteria 30013
2 Ga0070662_101863218 3300005457 Bacteria 520
3 Ga0070699_102065019 3300005518 Unclassified 521
4 Ga0068863_101138598 3300005841 Unclassified 785
5 Ga0081538_10044776 3300005981 Unclassified 2754
6 Ga0105238_11655404 3300009551 Bacteria 671
7 Ga0157378_10142838 3300013297 Bacteria 2224
8 Ga0157375_13282555 3300013308 Unclassified 539
9 Ga0207684_10105623 3300025910 Bacteria 2409
10 Ga0207667_10002682 3300025949 Bacteria 22012
11 Ga0207651_12161086 3300025960 Bacteria 500
12 Ga0207641_11713054 3300026088 Unclassified 630
13 Ga0265316_10046194 3300031344 Bacteria 3452
14 Ga0316575_10004915 3300031665 Bacteria 4724
15 Ga0316575_10015533 3300031665 Bacteria 2870
16 Ga0316575_10024886 3300031665 Bacteria 2319
17 Ga0316575_10036537 3300031665 Bacteria 1932
18 Ga0316575_10105181 3300031665 Bacteria 1149
19 Ga0316575_10170301 3300031665 Bacteria 902
20 Ga0316575_10176877 3300031665 Bacteria 885
21 Ga0316575_10196836 3300031665 Bacteria 839
22 Ga0316575_10242281 3300031665 Bacteria 755
23 Ga0316579_10003044 3300031691 Bacteria 6456
24 Ga0316579_10026105 3300031691 Bacteria 2642
25 Ga0316579_10026505 3300031691 Bacteria 2625
26 Ga0316579_10043509 3300031691 Bacteria 2089
27 Ga0316579_10055436 3300031691 Bacteria 1859
28 Ga0316579_10062483 3300031691 Bacteria 1753
29 Ga0316579_10075768 3300031691 Bacteria 1598
30 Ga0316579_10089921 3300031691 Bacteria 1466
31 Ga0316579_10128872 3300031691 Bacteria 1218
32 Ga0316579_10257994 3300031691 Bacteria 843
33 Ga0316579_10288090 3300031691 Bacteria 794
34 Ga0316579_10396419 3300031691 Bacteria 667
35 Ga0316579_10460210 3300031691 Bacteria 615
36 Ga0316579_10509228 3300031691 Unclassified 582
37 Ga0265342_10473202 3300031712 Unclassified 641
38 Ga0316576_10010007 3300031727 Bacteria 6141
39 Ga0316576_10021296 3300031727 Bacteria 4482
40 Ga0316576_10033370 3300031727 Bacteria 3663
41 Ga0316576_10067162 3300031727 Bacteria 2640
42 Ga0316576_10094817 3300031727 Bacteria 2226
43 Ga0316576_10118810 3300031727 Bacteria 1985
44 Ga0316576_10122266 3300031727 Bacteria 1955
45 Ga0316576_10128061 3300031727 Bacteria 1909
46 Ga0316576_10152248 3300031727 Bacteria 1743
47 Ga0316576_10172579 3300031727 Bacteria 1632
48 Ga0316576_10193910 3300031727 Bacteria 1531
49 Ga0316576_10207123 3300031727 Unclassified 1477
50 Ga0316576_10210504 3300031727 Bacteria 1463
51 Ga0316576_10216108 3300031727 Bacteria 1442
52 Ga0316576_10315630 3300031727 Bacteria 1166
53 Ga0316576_10376166 3300031727 Bacteria 1055
54 Ga0316576_10452982 3300031727 Bacteria 947
55 Ga0316576_10496625 3300031727 Bacteria 898
56 Ga0316576_10540872 3300031727 Bacteria 854
57 Ga0316576_10603070 3300031727 Bacteria 801
58 Ga0316576_10763660 3300031727 Unclassified 697
59 Ga0316576_10805634 3300031727 Unclassified 676
60 Ga0316576_10941206 3300031727 Unclassified 617
61 Ga0316576_11115856 3300031727 Bacteria 559
62 Ga0316578_10000551 3300031728 Bacteria 12895
63 Ga0316578_10007640 3300031728 Bacteria 5440
64 Ga0316578_10007710 3300031728 Bacteria 5423
65 Ga0316578_10015276 3300031728 Bacteria 4125
66 Ga0316578_10019142 3300031728 Bacteria 3762
67 Ga0316578_10021188 3300031728 Bacteria 3605
68 Ga0316578_10035193 3300031728 Bacteria 2878
69 Ga0316578_10054413 3300031728 Bacteria 2347
70 Ga0316578_10056718 3300031728 Bacteria 2301
71 Ga0316578_10121442 3300031728 Bacteria 1571
72 Ga0316578_10204149 3300031728 Bacteria 1189
73 Ga0316578_10220923 3300031728 Bacteria 1139
74 Ga0316578_10252762 3300031728 Bacteria 1057
75 Ga0316578_10327953 3300031728 Unclassified 913
76 Ga0316578_10604089 3300031728 Bacteria 642
77 Ga0316578_10771614 3300031728 Bacteria 558
78 Ga0316577_10005422 3300031733 Bacteria 6691
79 Ga0316577_10006900 3300031733 Bacteria 6033
80 Ga0316577_10007720 3300031733 Bacteria 5744
81 Ga0316577_10020572 3300031733 Bacteria 3657
82 Ga0316577_10026420 3300031733 Bacteria 3233
83 Ga0316577_10027365 3300031733 Bacteria 3179
84 Ga0316577_10076287 3300031733 Bacteria 1871
85 Ga0316577_10078648 3300031733 Bacteria 1842
86 Ga0316577_10196412 3300031733 Unclassified 1140
87 Ga0316577_10354341 3300031733 Bacteria 833
88 Ga0316577_10394991 3300031733 Bacteria 785
89 Ga0316577_10484146 3300031733 Bacteria 703
90 Ga0316577_10796795 3300031733 Bacteria 536
91 Ga0316583_10001747 3300032133 Bacteria 7377
92 Ga0316583_10003219 3300032133 Bacteria 5745
93 Ga0316583_10005988 3300032133 Bacteria 4369
94 Ga0316583_10012474 3300032133 Bacteria 3067
95 Ga0316583_10018579 3300032133 Bacteria 2496
96 Ga0316583_10074775 3300032133 Bacteria 1184
97 Ga0316583_10088280 3300032133 Bacteria 1082
98 Ga0316583_10166208 3300032133 Unclassified 768
99 Ga0316583_10300158 3300032133 Bacteria 555
100 Ga0316585_10001071 3300032137 Bacteria 7105
101 Ga0316585_10006632 3300032137 Bacteria 3313
102 Ga0316585_10012723 3300032137 Bacteria 2497
103 Ga0316585_10016388 3300032137 Bacteria 2231
104 Ga0316585_10061405 3300032137 Unclassified 1214
105 Ga0316585_10104407 3300032137 Bacteria 930
106 Ga0316585_10138278 3300032137 Bacteria 803
107 Ga0316585_10149617 3300032137 Unclassified 770
108 Ga0316585_10175951 3300032137 Bacteria 707
109 Ga0316585_10237545 3300032137 Unclassified 603
110 Ga0316580_10002359 3300032139 Bacteria 5179
111 Ga0316580_10005444 3300032139 Bacteria 3713
112 Ga0316580_10013721 3300032139 Bacteria 2468
113 Ga0316580_10062303 3300032139 Bacteria 1145
114 Ga0316580_10091741 3300032139 Unclassified 929
115 Ga0316580_10124719 3300032139 Bacteria 789
116 Ga0316593_10000043 3300032168 Bacteria 13880
117 Ga0316593_10000056 3300032168 Bacteria 12817
118 Ga0316593_10000122 3300032168 Bacteria 10489
119 Ga0316593_10000149 3300032168 Bacteria 9970
120 Ga0316593_10000942 3300032168 Bacteria 5984
121 Ga0316593_10001788 3300032168 Bacteria 4893
122 Ga0316593_10002306 3300032168 Bacteria 4483
123 Ga0316593_10004277 3300032168 Bacteria 3652
124 Ga0316593_10008848 3300032168 Bacteria 2824
125 Ga0316593_10009000 3300032168 Bacteria 2805
126 Ga0316593_10015532 3300032168 Bacteria 2292
127 Ga0316593_10016405 3300032168 Bacteria 2245
128 Ga0316593_10026600 3300032168 Bacteria 1851
129 Ga0316593_10029520 3300032168 Bacteria 1774
130 Ga0316593_10036299 3300032168 Unclassified 1625
131 Ga0316593_10040240 3300032168 Bacteria 1553
132 Ga0316593_10044569 3300032168 Unclassified 1485
133 Ga0316593_10047752 3300032168 Bacteria 1440
134 Ga0316593_10051290 3300032168 Bacteria 1394
135 Ga0316593_10057786 3300032168 Bacteria 1321
136 Ga0316593_10088827 3300032168 Bacteria 1086
137 Ga0316593_10092500 3300032168 Unclassified 1066
138 Ga0316593_10100585 3300032168 Bacteria 1025
139 Ga0316593_10140764 3300032168 Bacteria 874
140 Ga0316593_10145175 3300032168 Bacteria 861
141 Ga0316593_10166659 3300032168 Bacteria 806
142 Ga0316593_10171085 3300032168 Bacteria 796
143 Ga0316593_10179284 3300032168 Bacteria 778
144 Ga0316593_10188599 3300032168 Bacteria 759
145 Ga0316593_10189356 3300032168 Unclassified 758
146 Ga0316593_10210181 3300032168 Unclassified 721
147 Ga0316593_10276509 3300032168 Bacteria 632
148 Ga0316593_10319813 3300032168 Bacteria 590
149 Ga0316593_10334183 3300032168 Bacteria 578
150 Ga0316593_10410902 3300032168 Bacteria 524
151 Ga0316592_1000035 3300033524 Bacteria 10782
152 Ga0316592_1003868 3300033524 Bacteria 2745
153 Ga0316592_1006076 3300033524 Bacteria 2316
154 Ga0316592_1008651 3300033524 Bacteria 2020
155 Ga0316592_1010062 3300033524 Bacteria 1900
156 Ga0316592_1013873 3300033524 Bacteria 1666
157 Ga0316592_1016072 3300033524 Bacteria 1562
158 Ga0316592_1018250 3300033524 Unclassified 1477
159 Ga0316592_1024611 3300033524 Bacteria 1295
160 Ga0316592_1026504 3300033524 Bacteria 1252
161 Ga0316592_1032530 3300033524 Bacteria 1138
162 Ga0316592_1050326 3300033524 Bacteria 930
163 Ga0316592_1061991 3300033524 Bacteria 840
164 Ga0316592_1066899 3300033524 Bacteria 810
165 Ga0316592_1071948 3300033524 Bacteria 782
166 Ga0316592_1076291 3300033524 Unclassified 760
167 Ga0316592_1109143 3300033524 Bacteria 639
168 Ga0316592_1113038 3300033524 Unclassified 628
169 Ga0316592_1123925 3300033524 Bacteria 601
170 Ga0316592_1148347 3300033524 Bacteria 552
171 Ga0316592_1156039 3300033524 Unclassified 540
172 Ga0316592_1173701 3300033524 Bacteria 514
173 Ga0316586_1003033 3300033527 Bacteria 2163
174 Ga0316586_1012390 3300033527 Bacteria 1322
175 Ga0316586_1020265 3300033527 Bacteria 1092
176 Ga0316586_1032407 3300033527 Bacteria 900
177 Ga0316588_1001645 3300033528 Bacteria 3728
178 Ga0316588_1010647 3300033528 Bacteria 1944
179 Ga0316588_1017330 3300033528 Bacteria 1604
180 Ga0316588_1020761 3300033528 Bacteria 1490
181 Ga0316588_1032618 3300033528 Bacteria 1226
182 Ga0316588_1052112 3300033528 Bacteria 993
183 Ga0316588_1075960 3300033528 Bacteria 828
184 Ga0316588_1083484 3300033528 Unclassified 792
185 Ga0316588_1103738 3300033528 Bacteria 713
186 Ga0316588_1114168 3300033528 Bacteria 681
187 Ga0316588_1128172 3300033528 Bacteria 644
188 Ga0316588_1138860 3300033528 Bacteria 620
189 Ga0316588_1158583 3300033528 Bacteria 582
190 Ga0316588_1183468 3300033528 Bacteria 544
191 Ga0316588_1197305 3300033528 Bacteria 526
192 Ga0316587_1007748 3300033529 Bacteria 1675
193 Ga0316596_1000039 3300033541 Bacteria 13805
194 Ga0316596_1000116 3300033541 Bacteria 10404
195 Ga0316596_1000192 3300033541 Bacteria 8874
196 Ga0316596_1000254 3300033541 Bacteria 8213
197 Ga0316596_1001036 3300033541 Bacteria 5376
198 Ga0316596_1005024 3300033541 Bacteria 3000
199 Ga0316596_1006307 3300033541 Bacteria 2753
200 Ga0316596_1008561 3300033541 Bacteria 2442
201 Ga0316596_1010386 3300033541 Bacteria 2251
202 Ga0316596_1010844 3300033541 Bacteria 2216
203 Ga0316596_1023041 3300033541 Bacteria 1593
204 Ga0316596_1028651 3300033541 Unclassified 1440
205 Ga0316596_1029128 3300033541 Bacteria 1429
206 Ga0316596_1035593 3300033541 Bacteria 1302
207 Ga0316596_1043712 3300033541 Bacteria 1180
208 Ga0316596_1061051 3300033541 Bacteria 1005
209 Ga0316596_1067002 3300033541 Bacteria 960
210 Ga0316596_1083135 3300033541 Bacteria 861
211 Ga0316596_1090243 3300033541 Bacteria 826
212 Ga0316596_1100259 3300033541 Bacteria 783
213 Ga0316596_1151589 3300033541 Unclassified 637
214 Ga0316596_1155571 3300033541 Bacteria 629
215 Ga0316596_1170920 3300033541 Bacteria 600
216 Ga0316596_1208802 3300033541 Unclassified 544
217 Ga0316596_1217594 3300033541 Unclassified 534
218 Ga0316574_0000750 3300035398 Bacteria 13959
219 Ga0316574_0000856 3300035398 Bacteria 13374
220 Ga0316574_0007169 3300035398 Bacteria 6091
221 Ga0316574_0018621 3300035398 Bacteria 4085
222 Ga0316574_0019371 3300035398 Bacteria 4012
223 Ga0316574_0149613 3300035398 Bacteria 1505
224 Ga0316574_0270192 3300035398 Unclassified 1084
225 Ga0316574_0499590 3300035398 Bacteria 758
226 Ga0316574_0586776 3300035398 Bacteria 689
227 Ga0316574_0621281 3300035398 Unclassified 666
228 Ga0316582_0001586 3300036647 Bacteria 10123
229 Ga0316582_0005211 3300036647 Bacteria 6660
230 Ga0316582_0048341 3300036647 Bacteria 2689
231 Ga0316582_0065928 3300036647 Bacteria 2332
232 Ga0316582_0082059 3300036647 Bacteria 2107
233 Ga0316582_0090031 3300036647 Unclassified 2018
234 Ga0316582_0116617 3300036647 Bacteria 1783
235 Ga0316582_0135776 3300036647 Bacteria 1655
236 Ga0316582_0193981 3300036647 Bacteria 1384
237 Ga0316582_0312229 3300036647 Bacteria 1080
238 Ga0316582_0330335 3300036647 Bacteria 1048
239 Ga0316582_0438092 3300036647 Bacteria 901
240 Ga0316582_0490883 3300036647 Unclassified 846
241 Ga0316582_0519823 3300036647 Bacteria 820
242 Ga0316582_0597778 3300036647 Bacteria 759
243 Ga0316582_0734762 3300036647 Unclassified 677
244 Ga0316582_0790055 3300036647 Unclassified 650
245 Ga0316582_1085968 3300036647 Bacteria 545
246 Ga0316584_0001013 3300036712 Bacteria 16221
247 Ga0316584_0005607 3300036712 Bacteria 8449
248 Ga0316584_0007094 3300036712 Bacteria 7633
249 Ga0316584_0009321 3300036712 Bacteria 6809
250 Ga0316584_0041065 3300036712 Bacteria 3448
251 Ga0316584_0055739 3300036712 Bacteria 2959
252 Ga0316584_0060549 3300036712 Bacteria 2836
253 Ga0316584_0065768 3300036712 Bacteria 2716
254 Ga0316584_0081639 3300036712 Bacteria 2421
255 Ga0316584_0186424 3300036712 Bacteria 1535
256 Ga0316584_0232154 3300036712 Bacteria 1352
257 Ga0316584_0257463 3300036712 Bacteria 1273
258 Ga0316584_0263811 3300036712 Bacteria 1255
259 Ga0316584_0289998 3300036712 Unclassified 1187
260 Ga0316584_0356564 3300036712 Bacteria 1049
261 Ga0316584_0361657 3300036712 Bacteria 1040
262 Ga0316584_0429684 3300036712 Bacteria 937
263 Ga0316584_0447133 3300036712 Bacteria 914
264 Ga0316584_0527267 3300036712 Bacteria 827
265 Ga0316584_0635758 3300036712 Bacteria 737
266 Ga0316584_0818585 3300036712 Unclassified 631
267 Ga0316581_0004683 3300037588 Bacteria 3509
268 Ga0316581_0038125 3300037588 Bacteria 1461
269 Ga0316581_0103699 3300037588 Bacteria 876
270 Ga0316581_0119844 3300037588 Bacteria 811
271 Ga0316581_0268440 3300037588 Bacteria 524
272 Ga0400484_00339 3300038725 Bacteria 1073
273 Ga0400484_23516 3300038725 Bacteria 1090
274 Ga0400484_37672 3300038725 Bacteria 9379
275 Ga0400490_09970 3300038726 Bacteria 2455
276 Ga0400490_18978 3300038726 Bacteria 41932
277 Ga0400490_19520 3300038726 Bacteria 4897
278 Ga0400490_46131 3300038726 Unclassified 1552
279 Ga0400491_12399 3300038727 Bacteria 2848
280 Ga0400491_27094 3300038727 Bacteria 3364
281 Ga0400491_29253 3300038727 Bacteria 8022
282 Ga0400485_06724 3300038735 Bacteria 9642
283 Ga0400485_07355 3300038735 Bacteria 3551
284 Ga0400485_08047 3300038735 Bacteria 20055
285 Ga0400485_08672 3300038735 Bacteria 18258
286 Ga0400488_11907 3300038741 Bacteria 2004
287 Ga0400488_14430 3300038741 Bacteria 1195
288 Ga0400488_30360 3300038741 Bacteria 2227
289 Ga0400488_55284 3300038741 Bacteria 5326
290 Ga0400486_09544 3300038742 Bacteria 18982
291 Ga0400486_17114 3300038742 Bacteria 18189
292 Ga0400486_17728 3300038742 Bacteria 12468
293 Ga0400486_32047 3300038742 Bacteria 23991
294 Ga0400483_023928 3300039062 Bacteria 5426
295 Ga0400483_042851 3300039062 Bacteria 14723
296 Ga0400483_050568 3300039062 Bacteria 1183
297 Ga0400483_079370 3300039062 Bacteria 2136
298 Ga0400483_120099 3300039062 Bacteria 48943
299 Ga0400483_145340 3300039062 Bacteria 4054
300 Ga0400483_172863 3300039062 Bacteria 1074
301 Ga0400483_198250 3300039062 Bacteria 18872
302 Ga0400483_203763 3300039062 Bacteria 2275
303 Ga0400483_228134 3300039062 Bacteria 119181
304 Ga0400483_237050 3300039062 Bacteria 1258
305 Ga0400483_252076 3300039062 Bacteria 1548
306 Ga0400483_281776 3300039062 Bacteria 7321
307 Ga0400483_284300 3300039062 Bacteria 1601
308 Ga0400489_41472 3300039093 Bacteria 14759
309 Ga0400489_59643 3300039093 Bacteria 25982
310 Ga0400489_66216 3300039093 Bacteria 19270
311 Ga0400489_86209 3300039093 Bacteria 8537
312 Ga0400487_03008 3300039110 Bacteria 21586
313 Ga0400487_49771 3300039110 Bacteria 3399
314 Ga0400487_50276 3300039110 Bacteria 9871
315 Ga0400487_57554 3300039110 Bacteria 4240
316 Ga0451577_0402242 3300042876 Bacteria 1243
317 Ga0453684_0003637 3300044712 Bacteria 34273
318 Ga0453684_0214293 3300044712 Unclassified 2236
319 Ga0453684_0413250 3300044712 Bacteria 1509
320 Ga0453684_1627491 3300044712 Bacteria 662
321 Ga0501042_0546816 3300049578 Bacteria 842
322 Ga0501046_1020624 3300049580 Bacteria 574
323 Ga0501070_0835108 3300049586 Bacteria 722
324 Ga0501071_0710570 3300049587 Bacteria 774
325 Ga0501077_1002523 3300049593 Bacteria 537
326 Ga0501081_0106777 3300049743 Bacteria 1985
327 Ga0501082_0431732 3300060353 Bacteria 1151
328 Ga0530510_0773026 3300061734 Bacteria 732
329 2740990497 2740891818 Bacteria 6711283
330 Ga0068855_100001385
331 Ga0070662_101863218
332 Ga0070699_102065019
333 Ga0068863_101138598
334 Ga0081538_10044776
335 Ga0105238_11655404
336 Ga0157378_10142838
337 Ga0157375_13282555
338 Ga0207684_10105623
339 Ga0207667_10002682
340 Ga0207651_12161086
341 Ga0207641_11713054
342 Ga0265316_10046194
343 Ga0316575_10004915
344 Ga0316575_10015533
345 Ga0316575_10024886
346 Ga0316575_10036537
347 Ga0316575_10105181
348 Ga0316575_10170301
349 Ga0316575_10176877
350 Ga0316575_10196836
351 Ga0316575_10242281
352 Ga0316579_10003044
353 Ga0316579_10026105
354 Ga0316579_10026505
355 Ga0316579_10043509
356 Ga0316579_10055436
357 Ga0316579_10062483
358 Ga0316579_10075768
359 Ga0316579_10089921
360 Ga0316579_10128872
361 Ga0316579_10257994
362 Ga0316579_10288090
363 Ga0316579_10396419
364 Ga0316579_10460210
365 Ga0316579_10509228
366 Ga0265342_10473202
367 Ga0316576_10010007
368 Ga0316576_10021296
369 Ga0316576_10033370
370 Ga0316576_10067162
371 Ga0316576_10094817
372 Ga0316576_10118810
373 Ga0316576_10122266
374 Ga0316576_10128061
375 Ga0316576_10152248
376 Ga0316576_10172579
377 Ga0316576_10193910
378 Ga0316576_10207123
379 Ga0316576_10210504
380 Ga0316576_10216108
381 Ga0316576_10315630
382 Ga0316576_10376166
383 Ga0316576_10452982
384 Ga0316576_10496625
385 Ga0316576_10540872
386 Ga0316576_10603070
387 Ga0316576_10763660
388 Ga0316576_10805634
389 Ga0316576_10941206
390 Ga0316576_11115856
391 Ga0316578_10000551
392 Ga0316578_10007640
393 Ga0316578_10007710
394 Ga0316578_10015276
395 Ga0316578_10019142
396 Ga0316578_10021188
397 Ga0316578_10035193
398 Ga0316578_10054413
399 Ga0316578_10056718
400 Ga0316578_10121442
401 Ga0316578_10204149
402 Ga0316578_10220923
403 Ga0316578_10252762
404 Ga0316578_10327953
405 Ga0316578_10604089
406 Ga0316578_10771614
407 Ga0316577_10005422
408 Ga0316577_10006900
409 Ga0316577_10007720
410 Ga0316577_10020572
411 Ga0316577_10026420
412 Ga0316577_10027365
413 Ga0316577_10076287
414 Ga0316577_10078648
415 Ga0316577_10196412
416 Ga0316577_10354341
417 Ga0316577_10394991
418 Ga0316577_10484146
419 Ga0316577_10796795
420 Ga0316583_10001747
421 Ga0316583_10003219
422 Ga0316583_10005988
423 Ga0316583_10012474
424 Ga0316583_10018579
425 Ga0316583_10074775
426 Ga0316583_10088280
427 Ga0316583_10166208
428 Ga0316583_10300158
429 Ga0316585_10001071
430 Ga0316585_10006632
431 Ga0316585_10012723
432 Ga0316585_10016388
433 Ga0316585_10061405
434 Ga0316585_10104407
435 Ga0316585_10138278
436 Ga0316585_10149617
437 Ga0316585_10175951
438 Ga0316585_10237545
439 Ga0316580_10002359
440 Ga0316580_10005444
441 Ga0316580_10013721
442 Ga0316580_10062303
443 Ga0316580_10091741
444 Ga0316580_10124719
445 Ga0316593_10000043
446 Ga0316593_10000056
447 Ga0316593_10000122
448 Ga0316593_10000149
449 Ga0316593_10000942
450 Ga0316593_10001788
451 Ga0316593_10002306
452 Ga0316593_10004277
453 Ga0316593_10008848
454 Ga0316593_10009000
455 Ga0316593_10015532
456 Ga0316593_10016405
457 Ga0316593_10026600
458 Ga0316593_10029520
459 Ga0316593_10036299
460 Ga0316593_10040240
461 Ga0316593_10044569
462 Ga0316593_10047752
463 Ga0316593_10051290
464 Ga0316593_10057786
465 Ga0316593_10088827
466 Ga0316593_10092500
467 Ga0316593_10100585
468 Ga0316593_10140764
469 Ga0316593_10145175
470 Ga0316593_10166659
471 Ga0316593_10171085
472 Ga0316593_10179284
473 Ga0316593_10188599
474 Ga0316593_10189356
475 Ga0316593_10210181
476 Ga0316593_10276509
477 Ga0316593_10319813
478 Ga0316593_10334183
479 Ga0316593_10410902
480 Ga0316592_1000035
481 Ga0316592_1003868
482 Ga0316592_1006076
483 Ga0316592_1008651
484 Ga0316592_1010062
485 Ga0316592_1013873
486 Ga0316592_1016072
487 Ga0316592_1018250
488 Ga0316592_1024611
489 Ga0316592_1026504
490 Ga0316592_1032530
491 Ga0316592_1050326
492 Ga0316592_1061991
493 Ga0316592_1066899
494 Ga0316592_1071948
495 Ga0316592_1076291
496 Ga0316592_1109143
497 Ga0316592_1113038
498 Ga0316592_1123925
499 Ga0316592_1148347
500 Ga0316592_1156039
501 Ga0316592_1173701
502 Ga0316586_1003033
503 Ga0316586_1012390
504 Ga0316586_1020265
505 Ga0316586_1032407
506 Ga0316588_1001645
507 Ga0316588_1010647
508 Ga0316588_1017330
509 Ga0316588_1020761
510 Ga0316588_1032618
511 Ga0316588_1052112
512 Ga0316588_1075960
513 Ga0316588_1083484
514 Ga0316588_1103738
515 Ga0316588_1114168
516 Ga0316588_1128172
517 Ga0316588_1138860
518 Ga0316588_1158583
519 Ga0316588_1183468
520 Ga0316588_1197305
521 Ga0316587_1007748
522 Ga0316596_1000039
523 Ga0316596_1000116
524 Ga0316596_1000192
525 Ga0316596_1000254
526 Ga0316596_1001036
527 Ga0316596_1005024
528 Ga0316596_1006307
529 Ga0316596_1008561
530 Ga0316596_1010386
531 Ga0316596_1010844
532 Ga0316596_1023041
533 Ga0316596_1028651
534 Ga0316596_1029128
535 Ga0316596_1035593
536 Ga0316596_1043712
537 Ga0316596_1061051
538 Ga0316596_1067002
539 Ga0316596_1083135
540 Ga0316596_1090243
541 Ga0316596_1100259
542 Ga0316596_1151589
543 Ga0316596_1155571
544 Ga0316596_1170920
545 Ga0316596_1208802
546 Ga0316596_1217594
547 Ga0316574_0000750
548 Ga0316574_0000856
549 Ga0316574_0007169
550 Ga0316574_0018621
551 Ga0316574_0019371
552 Ga0316574_0149613
553 Ga0316574_0270192
554 Ga0316574_0499590
555 Ga0316574_0586776
556 Ga0316574_0621281
557 Ga0316582_0001586
558 Ga0316582_0005211
559 Ga0316582_0048341
560 Ga0316582_0065928
561 Ga0316582_0082059
562 Ga0316582_0090031
563 Ga0316582_0116617
564 Ga0316582_0135776
565 Ga0316582_0193981
566 Ga0316582_0312229
567 Ga0316582_0330335
568 Ga0316582_0438092
569 Ga0316582_0490883
570 Ga0316582_0519823
571 Ga0316582_0597778
572 Ga0316582_0734762
573 Ga0316582_0790055
574 Ga0316582_1085968
575 Ga0316584_0001013
576 Ga0316584_0005607
577 Ga0316584_0007094
578 Ga0316584_0009321
579 Ga0316584_0041065
580 Ga0316584_0055739
581 Ga0316584_0060549
582 Ga0316584_0065768
583 Ga0316584_0081639
584 Ga0316584_0186424
585 Ga0316584_0232154
586 Ga0316584_0257463
587 Ga0316584_0263811
588 Ga0316584_0289998
589 Ga0316584_0356564
590 Ga0316584_0361657
591 Ga0316584_0429684
592 Ga0316584_0447133
593 Ga0316584_0527267
594 Ga0316584_0635758
595 Ga0316584_0818585
596 Ga0316581_0004683
597 Ga0316581_0038125
598 Ga0316581_0103699
599 Ga0316581_0119844
600 Ga0316581_0268440
601 Ga0400484_00339
602 Ga0400484_23516
603 Ga0400484_37672
604 Ga0400490_09970
605 Ga0400490_18978
606 Ga0400490_19520
607 Ga0400490_46131
608 Ga0400491_12399
609 Ga0400491_27094
610 Ga0400491_29253
611 Ga0400485_06724
612 Ga0400485_07355
613 Ga0400485_08047
614 Ga0400485_08672
615 Ga0400488_11907
616 Ga0400488_14430
617 Ga0400488_30360
618 Ga0400488_55284
619 Ga0400486_09544
620 Ga0400486_17114
621 Ga0400486_17728
622 Ga0400486_32047
623 Ga0400483_023928
624 Ga0400483_042851
625 Ga0400483_050568
626 Ga0400483_079370
627 Ga0400483_120099
628 Ga0400483_145340
629 Ga0400483_172863
630 Ga0400483_198250
631 Ga0400483_203763
632 Ga0400483_228134
633 Ga0400483_237050
634 Ga0400483_252076
635 Ga0400483_281776
636 Ga0400483_284300
637 Ga0400489_41472
638 Ga0400489_59643
639 Ga0400489_66216
640 Ga0400489_86209
641 Ga0400487_03008
642 Ga0400487_49771
643 Ga0400487_50276
644 Ga0400487_57554
645 Ga0451577_0402242
646 Ga0453684_0003637
647 Ga0453684_0214293
648 Ga0453684_0413250
649 Ga0453684_1627491
650 Ga0501042_0546816
651 Ga0501046_1020624
652 Ga0501070_0835108
653 Ga0501071_0710570
654 Ga0501077_1002523
655 Ga0501081_0106777
656 Ga0501082_0431732
657 Ga0530510_0773026
658 2740990497

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00327

Ribosomal_L30

Ribosomal protein L30p/L7e

4

54

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nhn-assembly1.cif.gz_3 vgal, an antibiotic resistance abcf, in complex with 70s ribosome from listeria monocytogenes 0.9256 4 57
8esq-assembly1.cif.gz_t ytm1 associated nascent 60s ribosome state 2 0.9223 3 56
8ev3-assembly1.cif.gz_t ytm1 associated 60s nascent ribosome (-fkbp39) state 1b 0.9221 3 56
8cvm-assembly1.cif.gz_y cutibacterium acnes 50s ribosomal subunit with p-site trna and sarecycline bound in the local refined map 0.9215 1 57
5xym-assembly1.cif.gz_Z large subunit of mycobacterium smegmatis 0.9195 3 59
ID Description Score Start End Superfamily
af_Q54GH8_53_110_3.30.1390.20 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L30/L7 0.9227 4 59 3.30.1390.20
5hl7W00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L30/L7 0.9156 3 57 3.30.1390.20
af_C0H5I4_95_195_3.30.1390.20 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L30/L7 0.915 5 60 3.30.1390.20
af_I1L1F3_83_188_3.30.1390.20 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L30/L7 0.9123 4 57 3.30.1390.20
6dddM00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L30/L7 0.912 4 57 3.30.1390.20
ID Description Score Start End GO Terms
AF-C7LKI6-F1-model_v4 Multifunctional fusion protein [Includes: Small ribosomal subunit protein uS5; Large ribosomal subunit protein uL30] 0.9817 3 57 GO:0003735
GO:0006412
GO:0015934
GO:0015935
GO:0019843
AF-A0A3D0FPQ4-F1-model_v4 Multifunctional fusion protein [Includes: Large ribosomal subunit protein uL15; Large ribosomal subunit protein uL30] 0.9598 1 62 GO:0003735
GO:0006412
GO:0019843
GO:0022625
AF-N2AWT9-F1-model_v4 Large ribosomal subunit protein uL30 0.9448 1 59 GO:0003735
GO:0006412
GO:0022625
AF-A0A4R1KPD3-F1-model_v4 deleted 0.9447 1 60
AF-A0A6N0YI40-F1-model_v4 deleted 0.9443 1 60

Map