F410014

General Info

Members Datasets Scaffolds Average Seq Length
330 203 660 214

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_100019962|Ga0068864_1000199627
Length 228
Sequence MSEDPATGADPAGPFGAEALEAARVFFARPVTFLMGAVAIAGLPEADLPEVAFAGRSNVGKSSLINAVAGRKDLARASTAPGRTREINFFVAGGALRLVDLPGYGFAKVSKDAARKFQNLGRSYLRGRPNLKRAYLLIDARHGLKAVDEEAMAAFDASAVSYQIVLTKADKLKPREVEAMAAETLKKVSRRPAAFPRVLATSAEKATGVAELRAEILAACGLVPASGD

Samples

Sample ID Description Type Environment
1 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
92 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
120 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
132 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
142 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
143 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
144 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
172 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
178 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
179 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
180 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
181 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
182 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
183 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
186 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
187 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
188 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
189 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
190 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
191 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
192 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
193 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
194 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
195 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
196 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
197 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
198 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
199 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
200 2849560528 Caulobacter zeae 410 Isolate Unclassified
201 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
202 2851153111 Caulobacter radicis 736 Isolate Unclassified
203 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.27
Metatranscriptomes 0.3
Isolates 2.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.06
Nodule 0
Rhizoplane 2.73
Rhizosphere 73.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068864_100019962 3300005618 Bacteria 5603
2 Ga0065707_10082656 3300005295 Bacteria 13002
3 Ga0070658_10282195 3300005327 Bacteria 1414
4 Ga0070658_10730879 3300005327 Bacteria 860
5 Ga0070670_100000007 3300005331 Bacteria 318672
6 Ga0070670_100264925 3300005331 Bacteria 1499
7 Ga0070666_10069907 3300005335 Bacteria 2388
8 Ga0070680_100014168 3300005336 Bacteria 6228
9 Ga0070660_100026809 3300005339 Bacteria 4293
10 Ga0070668_100000622 3300005347 Bacteria 23828
11 Ga0070668_100002147 3300005347 Bacteria 14435
12 Ga0070668_100023757 3300005347 Bacteria 4640
13 Ga0070669_100020972 3300005353 Bacteria 4669
14 Ga0070669_100292476 3300005353 Bacteria 1308
15 Ga0070671_100002593 3300005355 Bacteria 13995
16 Ga0070671_100116585 3300005355 Bacteria 2245
17 Ga0070671_100151306 3300005355 Bacteria 1959
18 Ga0070671_100209179 3300005355 Bacteria 1654
19 Ga0070659_100000209 3300005366 Bacteria 45573
20 Ga0070659_100158020 3300005366 Bacteria 1852
21 Ga0070667_100000155 3300005367 Bacteria 85527
22 Ga0070662_100227770 3300005457 Bacteria 1490
23 Ga0070681_10002143 3300005458 Bacteria 17951
24 Ga0070681_10062535 3300005458 Bacteria 3696
25 Ga0070681_10679921 3300005458 Bacteria 945
26 Ga0070679_100013267 3300005530 Bacteria 7887
27 Ga0070679_100034595 3300005530 Bacteria 5007
28 Ga0070679_100233131 3300005530 Bacteria 1800
29 Ga0068853_100001861 3300005539 Bacteria 15500
30 Ga0070665_100000517 3300005548 Bacteria 54900
31 Ga0070665_100000837 3300005548 Bacteria 40130
32 Ga0070665_100109963 3300005548 Bacteria 2758
33 Ga0070665_100250876 3300005548 Bacteria 1770
34 Ga0068855_100051618 3300005563 Bacteria 4844
35 Ga0068855_100055451 3300005563 Bacteria 4655
36 Ga0068855_100230937 3300005563 Bacteria 2072
37 Ga0068859_100000230 3300005617 Bacteria 55064
38 Ga0068859_100035710 3300005617 Bacteria 4988
39 Ga0068864_100000067 3300005618 Bacteria 115834
40 Ga0068864_100000128 3300005618 Bacteria 73813
41 Ga0068864_100038687 3300005618 Bacteria 4074
42 Ga0068864_100171492 3300005618 Bacteria 1978
43 Ga0068861_100017621 3300005719 Bacteria 5075
44 Ga0068863_100000237 3300005841 Bacteria 58657
45 Ga0068863_100000360 3300005841 Bacteria 46300
46 Ga0068863_100116635 3300005841 Bacteria 2544
47 Ga0068863_100311625 3300005841 Bacteria 1528
48 Ga0068858_100000020 3300005842 Bacteria 175896
49 Ga0068858_100006907 3300005842 Bacteria 11032
50 Ga0068860_100000047 3300005843 Bacteria 213287
51 Ga0068860_100064388 3300005843 Bacteria 3482
52 Ga0068862_100007358 3300005844 Bacteria 9138
53 Ga0068862_100042848 3300005844 Bacteria 3857
54 Ga0070717_10014188 3300006028 Bacteria 6127
55 Ga0075365_10457875 3300006038 Bacteria 901
56 Ga0075368_10002733 3300006042 Bacteria 5824
57 Ga0075363_100014042 3300006048 Bacteria 3900
58 Ga0075364_10000819 3300006051 Bacteria 16407
59 Ga0075362_10033083 3300006177 Bacteria 2247
60 Ga0075362_10110360 3300006177 Bacteria 1294
61 Ga0075367_10001977 3300006178 Bacteria 9122
62 Ga0075366_10169585 3300006195 Bacteria 1324
63 Ga0075370_10043770 3300006353 Bacteria 2531
64 Ga0075370_10044933 3300006353 Bacteria 2497
65 Ga0068865_100001479 3300006881 Bacteria 13671
66 Ga0097620_100000230 3300006931 Bacteria 55064
67 Ga0097620_100035709 3300006931 Bacteria 4988
68 Ga0105250_10004008 3300009092 Bacteria 6870
69 Ga0105240_10000970 3300009093 Bacteria 51122
70 Ga0105240_10054934 3300009093 Bacteria 4988
71 Ga0105240_10351368 3300009093 Bacteria 1672
72 Ga0111539_11217778 3300009094 Bacteria 874
73 Ga0105247_10158471 3300009101 Bacteria 1497
74 Ga0105242_10266901 3300009176 Bacteria 1548
75 Ga0105248_10000517 3300009177 Bacteria 43853
76 Ga0105248_10003157 3300009177 Bacteria 18242
77 Ga0105248_10004051 3300009177 Bacteria 16197
78 Ga0105248_10017195 3300009177 Bacteria 7967
79 Ga0105248_10024728 3300009177 Bacteria 6679
80 Ga0105248_10112086 3300009177 Bacteria 3077
81 Ga0105237_10420349 3300009545 Bacteria 1342
82 Ga0105237_10763342 3300009545 Bacteria 974
83 Ga0105238_10162707 3300009551 Bacteria 2207
84 Ga0105238_10533555 3300009551 Bacteria 1177
85 Ga0105249_10517253 3300009553 Bacteria 1240
86 Ga0105249_10564170 3300009553 Bacteria 1190
87 Ga0157370_10244035 3300013104 Bacteria 1662
88 Ga0157370_10754291 3300013104 Bacteria 887
89 Ga0157369_10244929 3300013105 Bacteria 1872
90 Ga0157374_10479798 3300013296 Bacteria 1247
91 Ga0163162_10254421 3300013306 Bacteria 1888
92 Ga0157375_10460366 3300013308 Bacteria 1437
93 Ga0157375_10618529 3300013308 Bacteria 1241
94 Ga0163163_10004712 3300014325 Bacteria 11685
95 Ga0163163_10094161 3300014325 Bacteria 3013
96 Ga0163163_10181100 3300014325 Bacteria 2154
97 Ga0163163_10322042 3300014325 Bacteria 1600
98 Ga0163163_10398812 3300014325 Bacteria 1434
99 Ga0163163_10598867 3300014325 Bacteria 1165
100 Ga0157380_10000233 3300014326 Bacteria 33334
101 Ga0157380_11314075 3300014326 Bacteria 771
102 Ga0157377_10163265 3300014745 Bacteria 1387
103 Ga0157379_10005276 3300014968 Bacteria 11096
104 Ga0157379_10129052 3300014968 Bacteria 2275
105 Ga0213876_10079934 3300021384 Bacteria 1728
106 Ga0209026_1001143 3300025250 Bacteria 12484
107 Ga0209148_1006333 3300025254 Bacteria 2575
108 Ga0209256_1011042 3300025299 Bacteria 3675
109 Ga0209257_1000750 3300025304 Bacteria 49020
110 Ga0207696_1013177 3300025711 Bacteria 2894
111 Ga0207680_10019406 3300025903 Bacteria 3636
112 Ga0207680_10297099 3300025903 Bacteria 1125
113 Ga0207705_10000600 3300025909 Bacteria 30156
114 Ga0207705_10230044 3300025909 Bacteria 1410
115 Ga0207654_10057644 3300025911 Bacteria 2258
116 Ga0207707_10022112 3300025912 Bacteria 5560
117 Ga0207695_10000572 3300025913 Bacteria 75360
118 Ga0207695_10003712 3300025913 Bacteria 21257
119 Ga0207695_10249626 3300025913 Bacteria 1674
120 Ga0207695_10313256 3300025913 Bacteria 1459
121 Ga0207695_10359325 3300025913 Bacteria 1343
122 Ga0207660_10004856 3300025917 Bacteria 8753
123 Ga0207657_10000381 3300025919 Bacteria 46762
124 Ga0207652_10015165 3300025921 Bacteria 6253
125 Ga0207681_10260289 3300025923 Bacteria 1358
126 Ga0207694_10006599 3300025924 Bacteria 8819
127 Ga0207694_10048335 3300025924 Bacteria 3292
128 Ga0207650_10000030 3300025925 Bacteria 235824
129 Ga0207650_10335466 3300025925 Bacteria 1241
130 Ga0207644_10017723 3300025931 Bacteria 4814
131 Ga0207644_10085858 3300025931 Bacteria 2335
132 Ga0207644_10117372 3300025931 Bacteria 2021
133 Ga0207644_10128719 3300025931 Bacteria 1935
134 Ga0207690_10000116 3300025932 Bacteria 65776
135 Ga0207690_10189865 3300025932 Bacteria 1553
136 Ga0207669_10096380 3300025937 Bacteria 1942
137 Ga0207711_10000669 3300025941 Bacteria 34078
138 Ga0207711_10001000 3300025941 Bacteria 27099
139 Ga0207711_10005325 3300025941 Bacteria 10911
140 Ga0207711_10008392 3300025941 Bacteria 8643
141 Ga0207711_10015359 3300025941 Bacteria 6354
142 Ga0207711_10911761 3300025941 Bacteria 817
143 Ga0207661_10359170 3300025944 Bacteria 1316
144 Ga0207667_10049951 3300025949 Bacteria 4414
145 Ga0207667_10181917 3300025949 Bacteria 2158
146 Ga0207667_10251093 3300025949 Bacteria 1809
147 Ga0207712_10429874 3300025961 Bacteria 1116
148 Ga0207668_10000108 3300025972 Bacteria 59119
149 Ga0207668_10003135 3300025972 Bacteria 9678
150 Ga0207668_10036875 3300025972 Bacteria 3267
151 Ga0207658_10000265 3300025986 Bacteria 55108
152 Ga0207703_10000082 3300026035 Bacteria 110579
153 Ga0207703_10002582 3300026035 Bacteria 15641
154 Ga0207703_10535725 3300026035 Bacteria 1103
155 Ga0207639_10100023 3300026041 Bacteria 2341
156 Ga0207702_10652659 3300026078 Bacteria 1035
157 Ga0207641_10000007 3300026088 Bacteria 441443
158 Ga0207641_10001651 3300026088 Bacteria 21777
159 Ga0207641_10054510 3300026088 Bacteria 3393
160 Ga0207676_10000183 3300026095 Bacteria 55220
161 Ga0207676_10000241 3300026095 Bacteria 47707
162 Ga0207676_10067829 3300026095 Bacteria 2851
163 Ga0207676_10463957 3300026095 Bacteria 1196
164 Ga0207675_100029823 3300026118 Bacteria 5079
165 Ga0207683_10062118 3300026121 Bacteria 3289
166 Ga0209981_1000642 3300027378 Bacteria 4405
167 Ga0268266_10000003 3300028379 Bacteria 1701703
168 Ga0268266_10002012 3300028379 Bacteria 22687
169 Ga0268266_10014317 3300028379 Bacteria 6821
170 Ga0268266_10864111 3300028379 Bacteria 874
171 Ga0268265_10048111 3300028380 Bacteria 3199
172 Ga0268264_10000125 3300028381 Bacteria 186416
173 Ga0268264_10008341 3300028381 Bacteria 8609
174 Ga0265337_1004677 3300028556 Bacteria 5627
175 Ga0307517_10001402 3300028786 Bacteria 40531
176 Ga0307517_10149807 3300028786 Bacteria 1605
177 Ga0307515_10115399 3300028794 Bacteria 3094
178 Ga0307511_10015051 3300030521 Bacteria 7507
179 Ga0265760_10018847 3300031090 Bacteria 1988
180 Ga0265327_10000442 3300031251 Bacteria 75162
181 Ga0307513_10003728 3300031456 Bacteria 20602
182 Ga0307513_10013112 3300031456 Bacteria 10189
183 Ga0307509_10000852 3300031507 Bacteria 52588
184 Ga0307508_10295541 3300031616 Bacteria 1213
185 Ga0307413_10074826 3300031824 Bacteria 2147
186 Ga0307414_10029352 3300032004 Bacteria 3579
187 Ga0307411_10067862 3300032005 Bacteria 2402
188 Ga0307510_10002396 3300033180 Bacteria 21254
189 Ga0373944_0029975 3300035089 Bacteria 1629
190 Ga0373936_0017247 3300035113 Bacteria 2779
191 Ga0373927_0000472 3300035695 Bacteria 30834
192 Ga0373947_0258481 3300035725 Bacteria 1153
193 Ga0373925_0000003 3300037068 Bacteria 362401
194 Ga0395899_0000498 3300037312 Bacteria 43627
195 Ga0395899_0103654 3300037312 Bacteria 2052
196 Ga0395900_0000008 3300037418 Bacteria 480459
197 Ga0395900_0026246 3300037418 Bacteria 5965
198 Ga0395898_0019399 3300037466 Bacteria 6919
199 Ga0395898_0029691 3300037466 Bacteria 5473
200 Ga0395905_0023469 3300037471 Bacteria 5827
201 Ga0395905_0154620 3300037471 Bacteria 2157
202 Ga0395905_0162560 3300037471 Bacteria 2098
203 Ga0395905_0224490 3300037471 Bacteria 1758
204 Ga0395905_0591385 3300037471 Bacteria 1011
205 Ga0436364_0112766 3300037853 Bacteria 2164
206 Ga0395901_0000008 3300038443 Bacteria 495962
207 Ga0436365_1265793 3300039437 Bacteria 2142
208 Ga0436365_1532542 3300039437 Bacteria 5625
209 Ga0436361_0083908 3300039447 Bacteria 6837
210 Ga0436361_0385552 3300039447 Bacteria 1208
211 Ga0436361_0609240 3300039447 Bacteria 786
212 Ga0466970_0236185 3300044765 Bacteria 1022
213 Ga0466959_0129006 3300045049 Bacteria 1793
214 Ga0495627_001705 3300046453 Bacteria 12027
215 Ga0495590_0002641 3300046457 Bacteria 7408
216 Ga0495638_0000958 3300046460 Bacteria 29269
217 Ga0495638_0004560 3300046460 Bacteria 10487
218 Ga0495610_0081575 3300046512 Bacteria 1484
219 Ga0495620_0030187 3300046515 Bacteria 2499
220 Ga0495631_0001386 3300046518 Bacteria 14723
221 Ga0495637_0002369 3300046520 Bacteria 10445
222 Ga0495637_0056026 3300046520 Bacteria 1633
223 Ga0495643_0023018 3300046522 Bacteria 3546
224 Ga0495643_0140282 3300046522 Bacteria 1206
225 Ga0495648_0000067 3300046524 Bacteria 140250
226 Ga0495642_0005712 3300046528 Bacteria 4774
227 Ga0495652_0161410 3300046529 Bacteria 1740
228 Ga0495587_0239272 3300046536 Bacteria 1022
229 Ga0495598_0077109 3300046537 Bacteria 1062
230 Ga0495609_0022994 3300046538 Bacteria 2869
231 Ga0495597_0005134 3300046542 Bacteria 6983
232 Ga0495597_0130662 3300046542 Bacteria 1042
233 Ga0495622_0000720 3300046557 Bacteria 18691
234 Ga0495668_0004163 3300046616 Bacteria 10439
235 Ga0495668_0019226 3300046616 Bacteria 3941
236 Ga0495668_0071058 3300046616 Bacteria 1913
237 Ga0495668_0142026 3300046616 Bacteria 1314
238 Ga0495668_0235238 3300046616 Bacteria 1003
239 Ga0495668_0362946 3300046616 Bacteria 795
240 Ga0495625_0000590 3300046660 Bacteria 52780
241 Ga0495625_0001231 3300046660 Bacteria 32384
242 Ga0495625_0066221 3300046660 Bacteria 2545
243 Ga0495625_0083595 3300046660 Bacteria 2219
244 Ga0495625_0127087 3300046660 Bacteria 1729
245 Ga0495613_0017151 3300046689 Bacteria 5391
246 Ga0495670_0079219 3300046691 Bacteria 1672
247 Ga0495589_0008483 3300046794 Bacteria 5363
248 Ga0495672_0020633 3300047320 Bacteria 4312
249 Ga0495677_0075687 3300047445 Bacteria 1258
250 Ga0495685_151785 3300047447 Bacteria 752
251 Ga0495673_0000025 3300047469 Bacteria 512352
252 Ga0495673_0000549 3300047469 Bacteria 38306
253 Ga0495673_0104905 3300047469 Bacteria 1137
254 Ga0495681_0103234 3300047470 Bacteria 1243
255 Ga0495686_0002855 3300047472 Bacteria 15568
256 Ga0495686_0003400 3300047472 Bacteria 13840
257 Ga0495686_0040899 3300047472 Bacteria 2953
258 Ga0495602_0263164 3300048088 Bacteria 1278
259 Ga0496102_0144367 3300048905 Bacteria 2233
260 Ga0496103_0133195 3300048906 Bacteria 1588
261 Ga0496106_0235952 3300048909 Bacteria 1461
262 Ga0496109_0096123 3300048912 Bacteria 2744
263 Ga0496112_0091771 3300048915 Bacteria 3006
264 Ga0496112_0544946 3300048915 Bacteria 1094
265 Ga0496113_0126030 3300048916 Bacteria 2006
266 Ga0496115_0000126 3300048918 Bacteria 69044
267 Ga0496115_0055524 3300048918 Bacteria 3181
268 Ga0496116_0225064 3300048919 Bacteria 957
269 Ga0496117_0016826 3300048920 Bacteria 6144
270 Ga0496118_0021145 3300048921 Bacteria 5738
271 Ga0496119_0017703 3300048922 Bacteria 5347
272 Ga0496121_0000035 3300048924 Bacteria 374316
273 Ga0496121_0048011 3300048924 Bacteria 3637
274 Ga0496125_0060368 3300048928 Bacteria 3048
275 Ga0495678_000322 3300049459 Bacteria 51143
276 Ga0501033_0064072 3300049570 Bacteria 2705
277 Ga0501036_0304785 3300049572 Bacteria 1332
278 Ga0501043_0176813 3300049579 Bacteria 1664
279 Ga0501047_0005131 3300049581 Bacteria 12290
280 Ga0501047_0022440 3300049581 Bacteria 6062
281 Ga0501047_0030242 3300049581 Bacteria 5222
282 Ga0501035_0015485 3300049822 Bacteria 7035
283 nmdc:mga03683_22277_c1 3300050489 Bacteria 2455
284 nmdc:mga03683_33953_c1 3300050489 Bacteria 2062
285 nmdc:mga03n38_28210_c1 3300050490 Bacteria 2337
286 nmdc:mga00v17_254_c1 3300050491 Bacteria 31422
287 nmdc:mga0k408_115817_c1 3300050493 Bacteria 1586
288 nmdc:mga0k408_24970_c1 3300050493 Bacteria 3381
289 nmdc:mga07m45_348295_c1 3300050496 Bacteria 861
290 nmdc:mga07m45_483647_c1 3300050496 Bacteria 717
291 Ga0500635_0000060 3300053080 Bacteria 72066
292 Ga0500578_0000161 3300053086 Bacteria 79058
293 Ga0500578_0247043 3300053086 Bacteria 1076
294 Ga0500643_003204 3300053087 Bacteria 7985
295 Ga0500643_116384 3300053087 Bacteria 721
296 Ga0500644_0000166 3300053088 Bacteria 41856
297 Ga0500644_0007656 3300053088 Bacteria 2820
298 Ga0500583_0105620 3300053092 Bacteria 1383
299 Ga0500651_0008423 3300053093 Bacteria 6066
300 Ga0500555_042831 3300053103 Bacteria 1256
301 Ga0500556_0000895 3300053104 Bacteria 16661
302 Ga0500562_000615 3300053108 Bacteria 8604
303 Ga0500562_001488 3300053108 Bacteria 5777
304 Ga0500569_004635 3300053109 Bacteria 2902
305 Ga0500594_0000263 3300053118 Bacteria 12318
306 Ga0500595_002847 3300053119 Bacteria 8311
307 Ga0500595_014177 3300053119 Bacteria 3031
308 Ga0500608_008406 3300053122 Bacteria 4336
309 Ga0500559_0002446 3300053136 Bacteria 9612
310 Ga0500564_001600 3300053138 Bacteria 7932
311 Ga0500577_0005380 3300053142 Bacteria 3445
312 Ga0500577_0194442 3300053142 Bacteria 874
313 Ga0500590_020607 3300053148 Bacteria 3422
314 Ga0500603_014187 3300053150 Bacteria 1858
315 Ga0500619_030862 3300053154 Bacteria 1631
316 Ga0500622_0009321 3300053156 Bacteria 5440
317 Ga0500622_0010121 3300053156 Bacteria 5192
318 Ga0500624_033590 3300053157 Bacteria 893
319 Ga0500634_0131988 3300053161 Bacteria 1198
320 Ga0500636_0063237 3300053177 Bacteria 2157
321 Ga0500645_003095 3300053730 Bacteria 6961
322 Ga0500596_005111 3300053735 Bacteria 2343
323 2585146535 2582581279 Bacteria 4980720
324 2643998890 2643221598 Bacteria 4578346
325 2792459188 2791355048 Bacteria 5832535
326 2843744889 2843744320 Bacteria 5659202
327 2849563640 2849560528 Bacteria 5393480
328 2849573890 2849573788 Bacteria 5421256
329 2851154695 2851153111 Bacteria 5542585
330 2898334243 2898329390 Bacteria 5168154
331 Ga0068864_100019962
332 Ga0065707_10082656
333 Ga0070658_10282195
334 Ga0070658_10730879
335 Ga0070670_100000007
336 Ga0070670_100264925
337 Ga0070666_10069907
338 Ga0070680_100014168
339 Ga0070660_100026809
340 Ga0070668_100000622
341 Ga0070668_100002147
342 Ga0070668_100023757
343 Ga0070669_100020972
344 Ga0070669_100292476
345 Ga0070671_100002593
346 Ga0070671_100116585
347 Ga0070671_100151306
348 Ga0070671_100209179
349 Ga0070659_100000209
350 Ga0070659_100158020
351 Ga0070667_100000155
352 Ga0070662_100227770
353 Ga0070681_10002143
354 Ga0070681_10062535
355 Ga0070681_10679921
356 Ga0070679_100013267
357 Ga0070679_100034595
358 Ga0070679_100233131
359 Ga0068853_100001861
360 Ga0070665_100000517
361 Ga0070665_100000837
362 Ga0070665_100109963
363 Ga0070665_100250876
364 Ga0068855_100051618
365 Ga0068855_100055451
366 Ga0068855_100230937
367 Ga0068859_100000230
368 Ga0068859_100035710
369 Ga0068864_100000067
370 Ga0068864_100000128
371 Ga0068864_100038687
372 Ga0068864_100171492
373 Ga0068861_100017621
374 Ga0068863_100000237
375 Ga0068863_100000360
376 Ga0068863_100116635
377 Ga0068863_100311625
378 Ga0068858_100000020
379 Ga0068858_100006907
380 Ga0068860_100000047
381 Ga0068860_100064388
382 Ga0068862_100007358
383 Ga0068862_100042848
384 Ga0070717_10014188
385 Ga0075365_10457875
386 Ga0075368_10002733
387 Ga0075363_100014042
388 Ga0075364_10000819
389 Ga0075362_10033083
390 Ga0075362_10110360
391 Ga0075367_10001977
392 Ga0075366_10169585
393 Ga0075370_10043770
394 Ga0075370_10044933
395 Ga0068865_100001479
396 Ga0097620_100000230
397 Ga0097620_100035709
398 Ga0105250_10004008
399 Ga0105240_10000970
400 Ga0105240_10054934
401 Ga0105240_10351368
402 Ga0111539_11217778
403 Ga0105247_10158471
404 Ga0105242_10266901
405 Ga0105248_10000517
406 Ga0105248_10003157
407 Ga0105248_10004051
408 Ga0105248_10017195
409 Ga0105248_10024728
410 Ga0105248_10112086
411 Ga0105237_10420349
412 Ga0105237_10763342
413 Ga0105238_10162707
414 Ga0105238_10533555
415 Ga0105249_10517253
416 Ga0105249_10564170
417 Ga0157370_10244035
418 Ga0157370_10754291
419 Ga0157369_10244929
420 Ga0157374_10479798
421 Ga0163162_10254421
422 Ga0157375_10460366
423 Ga0157375_10618529
424 Ga0163163_10004712
425 Ga0163163_10094161
426 Ga0163163_10181100
427 Ga0163163_10322042
428 Ga0163163_10398812
429 Ga0163163_10598867
430 Ga0157380_10000233
431 Ga0157380_11314075
432 Ga0157377_10163265
433 Ga0157379_10005276
434 Ga0157379_10129052
435 Ga0213876_10079934
436 Ga0209026_1001143
437 Ga0209148_1006333
438 Ga0209256_1011042
439 Ga0209257_1000750
440 Ga0207696_1013177
441 Ga0207680_10019406
442 Ga0207680_10297099
443 Ga0207705_10000600
444 Ga0207705_10230044
445 Ga0207654_10057644
446 Ga0207707_10022112
447 Ga0207695_10000572
448 Ga0207695_10003712
449 Ga0207695_10249626
450 Ga0207695_10313256
451 Ga0207695_10359325
452 Ga0207660_10004856
453 Ga0207657_10000381
454 Ga0207652_10015165
455 Ga0207681_10260289
456 Ga0207694_10006599
457 Ga0207694_10048335
458 Ga0207650_10000030
459 Ga0207650_10335466
460 Ga0207644_10017723
461 Ga0207644_10085858
462 Ga0207644_10117372
463 Ga0207644_10128719
464 Ga0207690_10000116
465 Ga0207690_10189865
466 Ga0207669_10096380
467 Ga0207711_10000669
468 Ga0207711_10001000
469 Ga0207711_10005325
470 Ga0207711_10008392
471 Ga0207711_10015359
472 Ga0207711_10911761
473 Ga0207661_10359170
474 Ga0207667_10049951
475 Ga0207667_10181917
476 Ga0207667_10251093
477 Ga0207712_10429874
478 Ga0207668_10000108
479 Ga0207668_10003135
480 Ga0207668_10036875
481 Ga0207658_10000265
482 Ga0207703_10000082
483 Ga0207703_10002582
484 Ga0207703_10535725
485 Ga0207639_10100023
486 Ga0207702_10652659
487 Ga0207641_10000007
488 Ga0207641_10001651
489 Ga0207641_10054510
490 Ga0207676_10000183
491 Ga0207676_10000241
492 Ga0207676_10067829
493 Ga0207676_10463957
494 Ga0207675_100029823
495 Ga0207683_10062118
496 Ga0209981_1000642
497 Ga0268266_10000003
498 Ga0268266_10002012
499 Ga0268266_10014317
500 Ga0268266_10864111
501 Ga0268265_10048111
502 Ga0268264_10000125
503 Ga0268264_10008341
504 Ga0265337_1004677
505 Ga0307517_10001402
506 Ga0307517_10149807
507 Ga0307515_10115399
508 Ga0307511_10015051
509 Ga0265760_10018847
510 Ga0265327_10000442
511 Ga0307513_10003728
512 Ga0307513_10013112
513 Ga0307509_10000852
514 Ga0307508_10295541
515 Ga0307413_10074826
516 Ga0307414_10029352
517 Ga0307411_10067862
518 Ga0307510_10002396
519 Ga0373944_0029975
520 Ga0373936_0017247
521 Ga0373927_0000472
522 Ga0373947_0258481
523 Ga0373925_0000003
524 Ga0395899_0000498
525 Ga0395899_0103654
526 Ga0395900_0000008
527 Ga0395900_0026246
528 Ga0395898_0019399
529 Ga0395898_0029691
530 Ga0395905_0023469
531 Ga0395905_0154620
532 Ga0395905_0162560
533 Ga0395905_0224490
534 Ga0395905_0591385
535 Ga0436364_0112766
536 Ga0395901_0000008
537 Ga0436365_1265793
538 Ga0436365_1532542
539 Ga0436361_0083908
540 Ga0436361_0385552
541 Ga0436361_0609240
542 Ga0466970_0236185
543 Ga0466959_0129006
544 Ga0495627_001705
545 Ga0495590_0002641
546 Ga0495638_0000958
547 Ga0495638_0004560
548 Ga0495610_0081575
549 Ga0495620_0030187
550 Ga0495631_0001386
551 Ga0495637_0002369
552 Ga0495637_0056026
553 Ga0495643_0023018
554 Ga0495643_0140282
555 Ga0495648_0000067
556 Ga0495642_0005712
557 Ga0495652_0161410
558 Ga0495587_0239272
559 Ga0495598_0077109
560 Ga0495609_0022994
561 Ga0495597_0005134
562 Ga0495597_0130662
563 Ga0495622_0000720
564 Ga0495668_0004163
565 Ga0495668_0019226
566 Ga0495668_0071058
567 Ga0495668_0142026
568 Ga0495668_0235238
569 Ga0495668_0362946
570 Ga0495625_0000590
571 Ga0495625_0001231
572 Ga0495625_0066221
573 Ga0495625_0083595
574 Ga0495625_0127087
575 Ga0495613_0017151
576 Ga0495670_0079219
577 Ga0495589_0008483
578 Ga0495672_0020633
579 Ga0495677_0075687
580 Ga0495685_151785
581 Ga0495673_0000025
582 Ga0495673_0000549
583 Ga0495673_0104905
584 Ga0495681_0103234
585 Ga0495686_0002855
586 Ga0495686_0003400
587 Ga0495686_0040899
588 Ga0495602_0263164
589 Ga0496102_0144367
590 Ga0496103_0133195
591 Ga0496106_0235952
592 Ga0496109_0096123
593 Ga0496112_0091771
594 Ga0496112_0544946
595 Ga0496113_0126030
596 Ga0496115_0000126
597 Ga0496115_0055524
598 Ga0496116_0225064
599 Ga0496117_0016826
600 Ga0496118_0021145
601 Ga0496119_0017703
602 Ga0496121_0000035
603 Ga0496121_0048011
604 Ga0496125_0060368
605 Ga0495678_000322
606 Ga0501033_0064072
607 Ga0501036_0304785
608 Ga0501043_0176813
609 Ga0501047_0005131
610 Ga0501047_0022440
611 Ga0501047_0030242
612 Ga0501035_0015485
613 nmdc:mga03683_22277_c1
614 nmdc:mga03683_33953_c1
615 nmdc:mga03n38_28210_c1
616 nmdc:mga00v17_254_c1
617 nmdc:mga0k408_115817_c1
618 nmdc:mga0k408_24970_c1
619 nmdc:mga07m45_348295_c1
620 nmdc:mga07m45_483647_c1
621 Ga0500635_0000060
622 Ga0500578_0000161
623 Ga0500578_0247043
624 Ga0500643_003204
625 Ga0500643_116384
626 Ga0500644_0000166
627 Ga0500644_0007656
628 Ga0500583_0105620
629 Ga0500651_0008423
630 Ga0500555_042831
631 Ga0500556_0000895
632 Ga0500562_000615
633 Ga0500562_001488
634 Ga0500569_004635
635 Ga0500594_0000263
636 Ga0500595_002847
637 Ga0500595_014177
638 Ga0500608_008406
639 Ga0500559_0002446
640 Ga0500564_001600
641 Ga0500577_0005380
642 Ga0500577_0194442
643 Ga0500590_020607
644 Ga0500603_014187
645 Ga0500619_030862
646 Ga0500622_0009321
647 Ga0500622_0010121
648 Ga0500624_033590
649 Ga0500634_0131988
650 Ga0500636_0063237
651 Ga0500645_003095
652 Ga0500596_005111
653 2585146535
654 2643998890
655 2792459188
656 2843744889
657 2849563640
658 2849573890
659 2851154695
660 2898334243

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01926

MMR_HSR1

50S ribosome-binding GTPase

50

168

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pui-assembly2.cif.gz_B structure of engb gtpase 0.9313 10 193
7szs-assembly1.cif.gz_B crystal structure of probable gtp-binding protein engb bound to gdp from klebsiella pneumoniae subsp. pneumoniae 0.9288 7 197
1pui-assembly1.cif.gz_A structure of engb gtpase 0.9244 11 192
1pui-assembly2.cif.gz_B structure of engb gtpase 0.9204 10 193
5ucv-assembly1.cif.gz_A crystal structure of a ribosome biogenesis gtp-binding protein (ysxc) from neisseria gonorrhoeae with bound gdp 0.9187 3 193
ID Description Score Start End Superfamily
af_I1LLV7_341_539_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.937 5 193 3.40.50.300
1puiB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9313 10 193 3.40.50.300
af_Q8IL49_94_294_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9207 5 191 3.40.50.300
1puiB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9204 10 193 3.40.50.300
af_P0A6P7_1_210_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9199 1 201 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3D5W4K6-F1-model_v4 Probable GTP-binding protein EngB 0.9803 6 195 GO:0000917
GO:0005525
GO:0005829
GO:0046872
AF-A0A841HJF5-F1-model_v4 Probable GTP-binding protein EngB 0.9762 1 193 GO:0000917
GO:0005525
GO:0005829
GO:0046872
AF-A0A3D3U1L2-F1-model_v4 deleted 0.9694 4 193
AF-A0A1G0G6X7-F1-model_v4 Probable GTP-binding protein EngB 0.9685 7 190 GO:0000917
GO:0005525
GO:0005829
GO:0046872
AF-A0A3D5DBF0-F1-model_v4 Probable GTP-binding protein EngB 0.9677 3 192 GO:0000917
GO:0005525
GO:0005829
GO:0046872

Map