F410024

General Info

Members Datasets Scaffolds Average Seq Length
330 230 660 354

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1000537|Ga0081540_100053711
Length 383
Sequence MPGPIRSQLQQNSLRPMRKLQEAILPISLRTWLDATAHNLDTAPDNAAALLPKLAEAELFGLGVPALLGGHGGHVHDAIAGVAAVSERSLAAGFVFWGHRTFIEYLLQSPNEALRDRLLPDLLAGSRAGATGLSNAMKFLSGIEGLQIKATKTNGVVRVDGQLPWVTNLRVSGFDVAAAIQAEGNNPAFVASLSSEDIGLERSGDLDLMAMRATNTAAVKIDNVRVGVDRIIHHNASEWLPKVRPAFLGLQCAMAIGLARRSLAETTSRLKKGSDILREPSEALTNALVKAAAQLHEGLRDKSFERSPEKLFELRIDFAAIAARAVQLELSAAGGRAYLTHPGEGFQRRLREVTFLPIITPSLVQLKSALYTRQQRQLISEIA

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
24 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
25 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
38 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
46 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
69 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
70 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
71 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
84 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
87 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
88 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
89 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
90 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
91 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
92 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
117 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
154 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
159 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
160 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
161 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
162 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
163 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
164 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
165 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
166 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
167 2511231024 Pseudomonas sp. GM84 Isolate Nodule
168 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
169 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
170 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
171 2597489888 Pseudomonas fluorescens SS101 Isolate Rhizosphere
172 2597489889 Pseudomonas synxantha BG33R Isolate Rhizosphere
173 2599185167 Pseudomonas sp. NFPP28 Isolate Rhizoplane
174 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
175 2599185189 Pseudomonas sp. NFPP02 Isolate Rhizoplane
176 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
177 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
178 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
179 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
180 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
181 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
182 2600255296 Pseudomonas sp. NFR02 Isolate Rhizoplane
183 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
184 2643221713 Pseudomonas sp. Root9 Isolate Unclassified
185 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
186 2721755607 Pseudomonas fluorescens Pt14 Isolate Rhizosphere
187 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
188 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
189 2765235841 Pseudomonas putida AA7 Isolate Unclassified
190 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
191 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
192 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
193 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
194 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
195 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
196 2818991452 Burkholderia cepacia 561 Isolate Unclassified
197 2842694124 Methylopila sp. R-72369 Isolate Unclassified
198 2842826826 Pseudomonas sp. R-72172 Isolate Unclassified
199 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
200 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
201 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
202 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
203 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
204 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
205 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
206 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
207 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
208 2928170801 Burkholderia sp. 572 Isolate Unclassified
209 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
210 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
211 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
212 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
213 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
214 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
215 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
216 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
217 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
218 2946027586 Pseudomonas sp. W4I3 Isolate Rhizosphere
219 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
220 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
221 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
222 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
223 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
224 8054347763 Pseudomonas carnis NWU Be30 Isolate Unclassified
225 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
226 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere
227 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
228 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
229 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
230 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.09
Metatranscriptomes 0
Isolates 20.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.73
Nodule 2.12
Rhizoplane 4.24
Rhizosphere 59.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1000537 3300005983 Bacteria 36699
2 JGI25162J39368_1000044 3300002737 Bacteria 172199
3 JGI25151J46595_10002428 3300003187 Bacteria 11236
4 JGI25160J50197_1000090 3300003354 Bacteria 90580
5 Ga0055539_1000011 3300003752 Bacteria 399747
6 Ga0055533_1000014 3300003756 Bacteria 399747
7 Ga0055532_1000009 3300003758 Bacteria 399537
8 Ga0055532_1000471 3300003758 Bacteria 18078
9 Ga0055525_1000016 3300003759 Bacteria 399724
10 Ga0055524_1000227 3300003775 Bacteria 59891
11 Ga0055530_10001516 3300003791 Bacteria 16776
12 Ga0055540_1000112 3300003792 Bacteria 88200
13 Ga0055541_1000008 3300003841 Bacteria 399724
14 Ga0065165_1000928 3300005262 Bacteria 37588
15 Ga0065714_10072989 3300005288 Bacteria 3262
16 Ga0070669_100002693 3300005353 Bacteria 12806
17 Ga0070663_100022812 3300005455 Bacteria 4188
18 Ga0070697_100151674 3300005536 Bacteria 1953
19 Ga0068853_100384993 3300005539 Bacteria 1310
20 Ga0068854_100179721 3300005578 Bacteria 1652
21 Ga0068852_100294731 3300005616 Bacteria 1568
22 Ga0068851_10000279 3300005834 Bacteria 23569
23 Ga0075436_100066297 3300006914 Bacteria 2495
24 Ga0105251_10000199 3300009011 Bacteria 60845
25 Ga0105251_10000572 3300009011 Bacteria 34425
26 Ga0105251_10068008 3300009011 Bacteria 1663
27 Ga0105251_10111121 3300009011 Bacteria 1248
28 Ga0105244_10000229 3300009036 Bacteria 57809
29 Ga0105244_10002978 3300009036 Bacteria 12464
30 Ga0105244_10007571 3300009036 Bacteria 6895
31 Ga0105250_10000058 3300009092 Bacteria 111233
32 Ga0105250_10045245 3300009092 Bacteria 1764
33 Ga0105243_10001444 3300009148 Bacteria 20896
34 Ga0105243_10024761 3300009148 Bacteria 4581
35 Ga0105246_10000357 3300011119 Bacteria 24630
36 Ga0157373_10004679 3300013100 Bacteria 10287
37 Ga0157373_10098579 3300013100 Bacteria 2057
38 Ga0157373_10135656 3300013100 Bacteria 1730
39 Ga0157371_10000375 3300013102 Bacteria 56505
40 Ga0157371_10268091 3300013102 Bacteria 1232
41 Ga0157371_10268092 3300013102 Bacteria 1232
42 Ga0157370_10418830 3300013104 Bacteria 1232
43 Ga0157370_10418832 3300013104 Bacteria 1232
44 Ga0157369_10006679 3300013105 Bacteria 13326
45 Ga0157369_10010386 3300013105 Bacteria 10612
46 Ga0163162_10336817 3300013306 Bacteria 1641
47 Ga0157372_10006016 3300013307 Bacteria 12882
48 Ga0157375_10000729 3300013308 Bacteria 28973
49 Ga0157375_10215190 3300013308 Bacteria 2079
50 Ga0182008_10000202 3300014497 Bacteria 46777
51 Ga0182008_10000694 3300014497 Bacteria 24242
52 Ga0163161_10007006 3300017792 Bacteria 7797
53 Ga0209435_101648 3300025206 Bacteria 2737
54 Ga0209784_100023 3300025224 Bacteria 399841
55 Ga0209566_100019 3300025225 Bacteria 414836
56 Ga0209566_100268 3300025225 Bacteria 48824
57 Ga0209674_100034 3300025226 Bacteria 414903
58 Ga0209674_102075 3300025226 Bacteria 4565
59 Ga0209147_100027 3300025229 Bacteria 414610
60 Ga0209147_100206 3300025229 Bacteria 64466
61 Ga0209563_100037 3300025230 Bacteria 414903
62 Ga0209437_109529 3300025233 Bacteria 1512
63 Ga0209258_100520 3300025242 Bacteria 37049
64 Ga0209646_1000110 3300025246 Bacteria 156257
65 Ga0209677_100021 3300025253 Bacteria 414954
66 Ga0209025_1000382 3300025294 Bacteria 91921
67 Ga0209564_1003004 3300025295 Bacteria 12091
68 Ga0209050_1001187 3300025298 Bacteria 30613
69 Ga0209050_1033178 3300025298 Bacteria 1571
70 Ga0209256_1000011 3300025299 Bacteria 865309
71 Ga0207426_1000110 3300025302 Bacteria 235630
72 Ga0209051_1000016 3300025303 Bacteria 541891
73 Ga0209257_1000510 3300025304 Bacteria 67777
74 Ga0207656_10000456 3300025321 Bacteria 13659
75 Ga0207696_1000017 3300025711 Bacteria 491130
76 Ga0207696_1000018 3300025711 Bacteria 478605
77 Ga0207655_1004638 3300025728 Bacteria 9652
78 Ga0207655_1012403 3300025728 Bacteria 4983
79 Ga0207713_1000213 3300025735 Bacteria 78634
80 Ga0207713_1000523 3300025735 Bacteria 38601
81 Ga0207713_1005419 3300025735 Bacteria 7988
82 Ga0207713_1013808 3300025735 Bacteria 4232
83 Ga0207684_10234692 3300025910 Bacteria 1582
84 Ga0207681_10000430 3300025923 Bacteria 29298
85 Ga0207706_10032792 3300025933 Bacteria 4623
86 Ga0207709_10016519 3300025935 Bacteria 4103
87 Ga0207709_10031649 3300025935 Bacteria 3092
88 Ga0207678_10005145 3300026067 Bacteria 11722
89 Ga0307405_10000024 3300031731 Bacteria 127508
90 Ga0307412_10013261 3300031911 Bacteria 4826
91 Ga0395898_0058387 3300037466 Bacteria 3756
92 Ga0395905_0000020 3300037471 Bacteria 337672
93 Ga0395901_0391652 3300038443 Bacteria 1428
94 Ga0439456_000047 3300042013 Bacteria 43836
95 Ga0450900_003208 3300042136 Bacteria 1800
96 Ga0450902_000369 3300042137 Bacteria 5506
97 Ga0450901_000089 3300042533 Bacteria 9576
98 Ga0466965_0020680 3300044683 Bacteria 3166
99 Ga0466965_0171041 3300044683 Bacteria 1143
100 Ga0466961_0004687 3300044693 Bacteria 8592
101 Ga0466960_0000669 3300044901 Bacteria 11899
102 Ga0495627_000314 3300046453 Bacteria 47603
103 Ga0495603_0031616 3300046455 Bacteria 3186
104 Ga0495591_000778 3300046458 Bacteria 22788
105 Ga0495629_0000553 3300046459 Bacteria 30577
106 Ga0495629_0076403 3300046459 Bacteria 2338
107 Ga0495653_0000158 3300046463 Bacteria 56295
108 Ga0495653_0000246 3300046463 Bacteria 43409
109 Ga0495580_0000782 3300046472 Bacteria 27410
110 Ga0495580_0000803 3300046472 Bacteria 27143
111 Ga0495605_0050581 3300046474 Bacteria 2027
112 Ga0495664_0002782 3300046477 Bacteria 9416
113 Ga0495607_0000078 3300046501 Bacteria 99139
114 Ga0495607_0054860 3300046501 Bacteria 2295
115 Ga0495607_0058469 3300046501 Bacteria 2203
116 Ga0495583_0000131 3300046506 Bacteria 125393
117 Ga0495583_0006561 3300046506 Bacteria 7575
118 Ga0495606_0000104 3300046507 Bacteria 143973
119 Ga0495606_0000724 3300046507 Bacteria 51037
120 Ga0495606_0001589 3300046507 Bacteria 29686
121 Ga0495606_0024063 3300046507 Bacteria 4400
122 Ga0495610_0010127 3300046512 Bacteria 5886
123 Ga0495610_0063889 3300046512 Bacteria 1742
124 Ga0495620_0000049 3300046515 Bacteria 106184
125 Ga0495620_0001200 3300046515 Bacteria 15851
126 Ga0495620_0006337 3300046515 Bacteria 6513
127 Ga0495628_0000084 3300046516 Bacteria 73340
128 Ga0495628_0002828 3300046516 Bacteria 15569
129 Ga0495630_0002174 3300046517 Bacteria 13657
130 Ga0495631_0006169 3300046518 Bacteria 6211
131 Ga0495632_0000258 3300046519 Bacteria 52760
132 Ga0495632_0000292 3300046519 Bacteria 48501
133 Ga0495637_0012711 3300046520 Bacteria 4018
134 Ga0495643_0001028 3300046522 Bacteria 28446
135 Ga0495643_0045585 3300046522 Bacteria 2380
136 Ga0495643_0062626 3300046522 Bacteria 1969
137 Ga0495648_0000201 3300046524 Bacteria 69119
138 Ga0495648_0012951 3300046524 Bacteria 6193
139 Ga0495652_0000753 3300046529 Bacteria 37287
140 Ga0495654_0000059 3300046530 Bacteria 137056
141 Ga0495654_0007511 3300046530 Bacteria 6086
142 Ga0495665_0000315 3300046531 Bacteria 24616
143 Ga0495587_0084702 3300046536 Bacteria 1836
144 Ga0495609_0000330 3300046538 Bacteria 41760
145 Ga0495645_0001298 3300046543 Bacteria 17020
146 Ga0495625_0008622 3300046660 Bacteria 8675
147 Ga0495635_0017049 3300046663 Bacteria 5072
148 Ga0495661_0000168 3300046665 Bacteria 77948
149 Ga0495661_0000313 3300046665 Bacteria 54614
150 Ga0495661_0031568 3300046665 Bacteria 3359
151 Ga0495623_0000513 3300046679 Bacteria 25631
152 Ga0495646_0001807 3300046680 Bacteria 12842
153 Ga0495646_0002012 3300046680 Bacteria 12301
154 Ga0495624_0000190 3300046690 Bacteria 46541
155 Ga0495624_0000480 3300046690 Bacteria 31197
156 Ga0495589_0000674 3300046794 Bacteria 22355
157 Ga0495600_0019346 3300046809 Bacteria 4348
158 Ga0495600_0205408 3300046809 Bacteria 1264
159 Ga0495660_0010142 3300046810 Bacteria 5476
160 Ga0495604_0020949 3300047317 Bacteria 5216
161 Ga0495674_0000053 3300047319 Bacteria 76346
162 Ga0495674_0000742 3300047319 Bacteria 30834
163 Ga0495674_0043518 3300047319 Bacteria 3997
164 Ga0495674_0116556 3300047319 Bacteria 2259
165 Ga0495672_0116909 3300047320 Bacteria 1423
166 Ga0495680_0009526 3300047322 Bacteria 8728
167 Ga0495683_0018147 3300047323 Bacteria 3640
168 Ga0495675_0005525 3300047444 Bacteria 7711
169 Ga0495679_000193 3300047446 Bacteria 54057
170 Ga0495679_004306 3300047446 Bacteria 6601
171 Ga0495673_0000118 3300047469 Bacteria 147670
172 Ga0495681_0009143 3300047470 Bacteria 6134
173 Ga0495686_0059057 3300047472 Bacteria 2389
174 Ga0495686_0130131 3300047472 Bacteria 1493
175 Ga0495593_0000004 3300047673 Bacteria 112755
176 Ga0495602_0000061 3300048088 Bacteria 105566
177 Ga0495602_0023644 3300048088 Bacteria 5984
178 Ga0496105_0164424 3300048908 Bacteria 1821
179 Ga0496112_0342126 3300048915 Bacteria 1439
180 Ga0496114_0015129 3300048917 Bacteria 6204
181 Ga0496114_0048981 3300048917 Bacteria 3515
182 Ga0496116_0004140 3300048919 Bacteria 13973
183 Ga0496116_0018182 3300048919 Bacteria 5429
184 Ga0496117_0000158 3300048920 Bacteria 144464
185 Ga0496117_0002828 3300048920 Bacteria 21120
186 Ga0496117_0003915 3300048920 Bacteria 16862
187 Ga0496117_0012836 3300048920 Bacteria 7347
188 Ga0496117_0027559 3300048920 Bacteria 4423
189 Ga0496118_0003447 3300048921 Bacteria 19915
190 Ga0496118_0005364 3300048921 Bacteria 14594
191 Ga0496118_0016740 3300048921 Bacteria 6706
192 Ga0496118_0022661 3300048921 Bacteria 5481
193 Ga0496118_0050181 3300048921 Bacteria 3205
194 Ga0496119_0000189 3300048922 Bacteria 87262
195 Ga0496119_0004370 3300048922 Bacteria 14107
196 Ga0496119_0097424 3300048922 Bacteria 1658
197 Ga0496120_0003521 3300048923 Bacteria 14180
198 Ga0496120_0007945 3300048923 Bacteria 7809
199 Ga0496121_0001132 3300048924 Bacteria 46819
200 Ga0496121_0014571 3300048924 Bacteria 8329
201 Ga0496121_0054826 3300048924 Bacteria 3327
202 Ga0496121_0096804 3300048924 Bacteria 2289
203 Ga0496122_0000260 3300048925 Bacteria 118852
204 Ga0496122_0026705 3300048925 Bacteria 4967
205 Ga0496122_0076181 3300048925 Bacteria 2361
206 Ga0496123_0000037 3300048926 Bacteria 262238
207 Ga0496123_0055189 3300048926 Bacteria 2608
208 Ga0496123_0063399 3300048926 Bacteria 2361
209 Ga0496123_0063476 3300048926 Bacteria 2359
210 Ga0496124_0000647 3300048927 Bacteria 57453
211 Ga0496124_0003763 3300048927 Bacteria 18246
212 Ga0496124_0006381 3300048927 Bacteria 12861
213 Ga0496124_0008998 3300048927 Bacteria 10331
214 Ga0496124_0048950 3300048927 Bacteria 3607
215 Ga0496124_0085608 3300048927 Bacteria 2582
216 Ga0496125_0000274 3300048928 Bacteria 104123
217 Ga0496125_0005585 3300048928 Bacteria 13901
218 Ga0496125_0008614 3300048928 Bacteria 10646
219 Ga0496125_0023980 3300048928 Bacteria 5620
220 Ga0496125_0034463 3300048928 Bacteria 4462
221 Ga0496125_0038028 3300048928 Bacteria 4174
222 Ga0496125_0118883 3300048928 Bacteria 1891
223 Ga0496126_0005821 3300048929 Bacteria 13937
224 Ga0496126_0023503 3300048929 Bacteria 5972
225 Ga0496126_0024306 3300048929 Bacteria 5851
226 Ga0496126_0027245 3300048929 Bacteria 5462
227 Ga0496126_0030713 3300048929 Bacteria 5087
228 Ga0496126_0109901 3300048929 Bacteria 2402
229 Ga0496126_0120961 3300048929 Bacteria 2270
230 Ga0501031_0013755 3300049568 Bacteria 5275
231 Ga0501032_0053493 3300049569 Bacteria 2719
232 Ga0501033_0000571 3300049570 Bacteria 34379
233 Ga0501033_0102440 3300049570 Bacteria 2088
234 Ga0501034_0397052 3300049571 Bacteria 1302
235 Ga0501036_0028364 3300049572 Bacteria 4731
236 Ga0501036_0072057 3300049572 Bacteria 2921
237 Ga0501037_0005926 3300049573 Bacteria 8924
238 Ga0501038_0023091 3300049574 Bacteria 5565
239 Ga0501039_0028008 3300049575 Bacteria 4334
240 Ga0501041_0048844 3300049577 Bacteria 2577
241 Ga0501043_0001837 3300049579 Bacteria 18218
242 Ga0501043_0013086 3300049579 Bacteria 6484
243 Ga0501046_0023923 3300049580 Bacteria 5017
244 Ga0501047_0015110 3300049581 Bacteria 7350
245 Ga0501071_0175324 3300049587 Bacteria 1606
246 Ga0501080_0135604 3300049742 Bacteria 2278
247 Ga0501035_0002635 3300049822 Bacteria 17483
248 Ga0501035_0011932 3300049822 Bacteria 8042
249 Ga0501044_0013599 3300049823 Bacteria 8796
250 Ga0501044_0067857 3300049823 Bacteria 3633
251 Ga0501044_0181325 3300049823 Bacteria 2072
252 Ga0500643_013796 3300053087 Bacteria 2835
253 Ga0500641_0028902 3300053096 Bacteria 2168
254 Ga0500650_0000146 3300053098 Bacteria 18487
255 Ga0500556_0000003 3300053104 Bacteria 679379
256 Ga0500562_004648 3300053108 Bacteria 3465
257 Ga0500642_0000005 3300053130 Bacteria 422725
258 Ga0500652_001184 3300053131 Bacteria 8314
259 Ga0500658_0008213 3300053134 Bacteria 3857
260 Ga0500627_0010077 3300053158 Bacteria 3431
261 Ga0500634_0000091 3300053161 Bacteria 34955
262 2501072910 2501025501 Bacteria 7768574
263 2501409284 2501025504 Bacteria 8008976
264 2511094312 2510917013 Bacteria 9951648
265 2511098844 2510917014 Bacteria 8296963
266 2511109062 2510917015 Bacteria 7950052
267 2511376043 2511231024 Bacteria 5835885
268 2513589731 2513237087 Bacteria 5817514
269 2513678077 2513237098 Bacteria 9902361
270 2555249123 2554235231 Bacteria 5215788
271 2597864170 2597489888 Bacteria 6179543
272 2597869687 2597489889 Bacteria 6297495
273 2599398482 2599185167 Bacteria 6353609
274 2599450531 2599185179 Bacteria 6611171
275 2599507191 2599185189 Bacteria 5862825
276 2599512968 2599185190 Bacteria 6285678
277 2599521664 2599185191 Bacteria 6297582
278 2599740930 2599185239 Bacteria 8686614
279 2599880426 2599185288 Bacteria 6666191
280 2599891645 2599185290 Bacteria 6289611
281 2599946890 2599185303 Bacteria 6512725
282 2601692007 2600255296 Bacteria 5784754
283 2643873919 2643221571 Bacteria 6228673
284 2644620394 2643221713 Bacteria 6554480
285 2677896240 2675903420 Bacteria 6247433
286 2723248872 2721755607 Bacteria 5841722
287 2738806649 2738541294 Bacteria 6925949
288 2738894009 2738541309 Bacteria 6926455
289 2765583368 2765235841 Bacteria 6137024
290 2807407838 2806310737 Bacteria 5751088
291 2807456141 2806310745 Bacteria 5742165
292 2808969426 2808606384 Bacteria 8474373
293 2809004257 2808606390 Bacteria 8476311
294 2809012835 2808606391 Bacteria 8308166
295 2812366390 2811994881 Bacteria 6298475
296 2819630623 2818991452 Bacteria 8442785
297 2842696084 2842694124 Bacteria 4063419
298 2842827076 2842826826 Bacteria 5974129
299 2842839135 2842837860 Bacteria 6066181
300 2856289605 2856287931 Bacteria 7223934
301 2857358950 2857357740 Bacteria 9937880
302 2860870750 2860867994 Bacteria 5645326
303 2904547805 2904541872 Bacteria 8915136
304 2908449495 2908446538 Bacteria 6829095
305 2912965964 2912963787 Bacteria 5646108
306 2919159056 2919155634 Bacteria 4860545
307 2923520414 2923519811 Bacteria 6298479
308 2928174394 2928170801 Bacteria 8785406
309 2929166951 2929160207 Bacteria 9075316
310 2931393786 2931390751 Bacteria 6273349
311 2932800502 2932794094 Bacteria 7915132
312 2935647790 2935638405 Bacteria 10015038
313 2935666835 2935665750 Bacteria 9571747
314 2935837274 2935827899 Bacteria 10038562
315 2939656898 2939651529 Bacteria 5895393
316 2945963215 2945961074 Bacteria 7342064
317 2946009539 2946006987 Bacteria 6705746
318 2946030780 2946027586 Bacteria 6049274
319 2947237967 2947233263 Bacteria 6439278
320 3007872949 3007872151 Bacteria 5268868
321 8003404174 8003400568 Bacteria 5535898
322 8018851304 8018845410 Bacteria 8933938
323 8021120845 8021120328 Bacteria 8782274
324 8054352411 8054347763 Bacteria 5901107
325 8054931775 8054929484 Bacteria 5599761
326 8055882062 8055878733 Bacteria 5907058
327 8056119302 8056115690 Bacteria 5527654
328 8056123960 8056120720 Bacteria 5758328
329 8056140563 8056137416 Bacteria 6147080
330 8056150770 8056148874 Bacteria 6479865
331 Ga0081540_1000537
332 JGI25162J39368_1000044
333 JGI25151J46595_10002428
334 JGI25160J50197_1000090
335 Ga0055539_1000011
336 Ga0055533_1000014
337 Ga0055532_1000009
338 Ga0055532_1000471
339 Ga0055525_1000016
340 Ga0055524_1000227
341 Ga0055530_10001516
342 Ga0055540_1000112
343 Ga0055541_1000008
344 Ga0065165_1000928
345 Ga0065714_10072989
346 Ga0070669_100002693
347 Ga0070663_100022812
348 Ga0070697_100151674
349 Ga0068853_100384993
350 Ga0068854_100179721
351 Ga0068852_100294731
352 Ga0068851_10000279
353 Ga0075436_100066297
354 Ga0105251_10000199
355 Ga0105251_10000572
356 Ga0105251_10068008
357 Ga0105251_10111121
358 Ga0105244_10000229
359 Ga0105244_10002978
360 Ga0105244_10007571
361 Ga0105250_10000058
362 Ga0105250_10045245
363 Ga0105243_10001444
364 Ga0105243_10024761
365 Ga0105246_10000357
366 Ga0157373_10004679
367 Ga0157373_10098579
368 Ga0157373_10135656
369 Ga0157371_10000375
370 Ga0157371_10268091
371 Ga0157371_10268092
372 Ga0157370_10418830
373 Ga0157370_10418832
374 Ga0157369_10006679
375 Ga0157369_10010386
376 Ga0163162_10336817
377 Ga0157372_10006016
378 Ga0157375_10000729
379 Ga0157375_10215190
380 Ga0182008_10000202
381 Ga0182008_10000694
382 Ga0163161_10007006
383 Ga0209435_101648
384 Ga0209784_100023
385 Ga0209566_100019
386 Ga0209566_100268
387 Ga0209674_100034
388 Ga0209674_102075
389 Ga0209147_100027
390 Ga0209147_100206
391 Ga0209563_100037
392 Ga0209437_109529
393 Ga0209258_100520
394 Ga0209646_1000110
395 Ga0209677_100021
396 Ga0209025_1000382
397 Ga0209564_1003004
398 Ga0209050_1001187
399 Ga0209050_1033178
400 Ga0209256_1000011
401 Ga0207426_1000110
402 Ga0209051_1000016
403 Ga0209257_1000510
404 Ga0207656_10000456
405 Ga0207696_1000017
406 Ga0207696_1000018
407 Ga0207655_1004638
408 Ga0207655_1012403
409 Ga0207713_1000213
410 Ga0207713_1000523
411 Ga0207713_1005419
412 Ga0207713_1013808
413 Ga0207684_10234692
414 Ga0207681_10000430
415 Ga0207706_10032792
416 Ga0207709_10016519
417 Ga0207709_10031649
418 Ga0207678_10005145
419 Ga0307405_10000024
420 Ga0307412_10013261
421 Ga0395898_0058387
422 Ga0395905_0000020
423 Ga0395901_0391652
424 Ga0439456_000047
425 Ga0450900_003208
426 Ga0450902_000369
427 Ga0450901_000089
428 Ga0466965_0020680
429 Ga0466965_0171041
430 Ga0466961_0004687
431 Ga0466960_0000669
432 Ga0495627_000314
433 Ga0495603_0031616
434 Ga0495591_000778
435 Ga0495629_0000553
436 Ga0495629_0076403
437 Ga0495653_0000158
438 Ga0495653_0000246
439 Ga0495580_0000782
440 Ga0495580_0000803
441 Ga0495605_0050581
442 Ga0495664_0002782
443 Ga0495607_0000078
444 Ga0495607_0054860
445 Ga0495607_0058469
446 Ga0495583_0000131
447 Ga0495583_0006561
448 Ga0495606_0000104
449 Ga0495606_0000724
450 Ga0495606_0001589
451 Ga0495606_0024063
452 Ga0495610_0010127
453 Ga0495610_0063889
454 Ga0495620_0000049
455 Ga0495620_0001200
456 Ga0495620_0006337
457 Ga0495628_0000084
458 Ga0495628_0002828
459 Ga0495630_0002174
460 Ga0495631_0006169
461 Ga0495632_0000258
462 Ga0495632_0000292
463 Ga0495637_0012711
464 Ga0495643_0001028
465 Ga0495643_0045585
466 Ga0495643_0062626
467 Ga0495648_0000201
468 Ga0495648_0012951
469 Ga0495652_0000753
470 Ga0495654_0000059
471 Ga0495654_0007511
472 Ga0495665_0000315
473 Ga0495587_0084702
474 Ga0495609_0000330
475 Ga0495645_0001298
476 Ga0495625_0008622
477 Ga0495635_0017049
478 Ga0495661_0000168
479 Ga0495661_0000313
480 Ga0495661_0031568
481 Ga0495623_0000513
482 Ga0495646_0001807
483 Ga0495646_0002012
484 Ga0495624_0000190
485 Ga0495624_0000480
486 Ga0495589_0000674
487 Ga0495600_0019346
488 Ga0495600_0205408
489 Ga0495660_0010142
490 Ga0495604_0020949
491 Ga0495674_0000053
492 Ga0495674_0000742
493 Ga0495674_0043518
494 Ga0495674_0116556
495 Ga0495672_0116909
496 Ga0495680_0009526
497 Ga0495683_0018147
498 Ga0495675_0005525
499 Ga0495679_000193
500 Ga0495679_004306
501 Ga0495673_0000118
502 Ga0495681_0009143
503 Ga0495686_0059057
504 Ga0495686_0130131
505 Ga0495593_0000004
506 Ga0495602_0000061
507 Ga0495602_0023644
508 Ga0496105_0164424
509 Ga0496112_0342126
510 Ga0496114_0015129
511 Ga0496114_0048981
512 Ga0496116_0004140
513 Ga0496116_0018182
514 Ga0496117_0000158
515 Ga0496117_0002828
516 Ga0496117_0003915
517 Ga0496117_0012836
518 Ga0496117_0027559
519 Ga0496118_0003447
520 Ga0496118_0005364
521 Ga0496118_0016740
522 Ga0496118_0022661
523 Ga0496118_0050181
524 Ga0496119_0000189
525 Ga0496119_0004370
526 Ga0496119_0097424
527 Ga0496120_0003521
528 Ga0496120_0007945
529 Ga0496121_0001132
530 Ga0496121_0014571
531 Ga0496121_0054826
532 Ga0496121_0096804
533 Ga0496122_0000260
534 Ga0496122_0026705
535 Ga0496122_0076181
536 Ga0496123_0000037
537 Ga0496123_0055189
538 Ga0496123_0063399
539 Ga0496123_0063476
540 Ga0496124_0000647
541 Ga0496124_0003763
542 Ga0496124_0006381
543 Ga0496124_0008998
544 Ga0496124_0048950
545 Ga0496124_0085608
546 Ga0496125_0000274
547 Ga0496125_0005585
548 Ga0496125_0008614
549 Ga0496125_0023980
550 Ga0496125_0034463
551 Ga0496125_0038028
552 Ga0496125_0118883
553 Ga0496126_0005821
554 Ga0496126_0023503
555 Ga0496126_0024306
556 Ga0496126_0027245
557 Ga0496126_0030713
558 Ga0496126_0109901
559 Ga0496126_0120961
560 Ga0501031_0013755
561 Ga0501032_0053493
562 Ga0501033_0000571
563 Ga0501033_0102440
564 Ga0501034_0397052
565 Ga0501036_0028364
566 Ga0501036_0072057
567 Ga0501037_0005926
568 Ga0501038_0023091
569 Ga0501039_0028008
570 Ga0501041_0048844
571 Ga0501043_0001837
572 Ga0501043_0013086
573 Ga0501046_0023923
574 Ga0501047_0015110
575 Ga0501071_0175324
576 Ga0501080_0135604
577 Ga0501035_0002635
578 Ga0501035_0011932
579 Ga0501044_0013599
580 Ga0501044_0067857
581 Ga0501044_0181325
582 Ga0500643_013796
583 Ga0500641_0028902
584 Ga0500650_0000146
585 Ga0500556_0000003
586 Ga0500562_004648
587 Ga0500642_0000005
588 Ga0500652_001184
589 Ga0500658_0008213
590 Ga0500627_0010077
591 Ga0500634_0000091
592 2501072910
593 2501409284
594 2511094312
595 2511098844
596 2511109062
597 2511376043
598 2513589731
599 2513678077
600 2555249123
601 2597864170
602 2597869687
603 2599398482
604 2599450531
605 2599507191
606 2599512968
607 2599521664
608 2599740930
609 2599880426
610 2599891645
611 2599946890
612 2601692007
613 2643873919
614 2644620394
615 2677896240
616 2723248872
617 2738806649
618 2738894009
619 2765583368
620 2807407838
621 2807456141
622 2808969426
623 2809004257
624 2809012835
625 2812366390
626 2819630623
627 2842696084
628 2842827076
629 2842839135
630 2856289605
631 2857358950
632 2860870750
633 2904547805
634 2908449495
635 2912965964
636 2919159056
637 2923520414
638 2928174394
639 2929166951
640 2931393786
641 2932800502
642 2935647790
643 2935666835
644 2935837274
645 2939656898
646 2945963215
647 2946009539
648 2946030780
649 2947237967
650 3007872949
651 8003404174
652 8018851304
653 8021120845
654 8054352411
655 8054931775
656 8055882062
657 8056119302
658 8056123960
659 8056140563
660 8056150770

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

28

126

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kto-assembly1.cif.gz_D crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.8667 6 351
2vig-assembly1.cif.gz_D crystal structure of human short-chain acyl coa dehydrogenase 0.8635 5 355
7w0j-assembly1.cif.gz_A acyl-coa dehydrogenase, tfu_1647 0.8622 5 351
2vig-assembly1.cif.gz_A crystal structure of human short-chain acyl coa dehydrogenase 0.8588 5 355
3pfd-assembly1.cif.gz_A crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.8578 5 351
ID Description Score Start End Superfamily
af_Q2G1I3_106_205_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9165 115 214 2.40.110.10
af_I6XFA9_143_248_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9018 122 208 2.40.110.10
af_Q2FVW7_140_230_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8997 125 209 2.40.110.10
af_Q2G1I3_106_205_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8996 115 214 2.40.110.10
af_Q0DCC7_1_83_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8995 130 209 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A443ZQ01-F1-model_v4 Acyl-CoA dehydrogenase 0.9912 1 353 GO:0003995
GO:0050660
AF-A0A375IPG3-F1-model_v4 Acyl-CoA dehydrogenase/oxidase N-terminal domain-containing protein 0.9866 2 354 GO:0003995
GO:0050660
AF-A0A443ZQ01-F1-model_v4 Acyl-CoA dehydrogenase 0.9856 1 353 GO:0003995
GO:0050660
AF-A0A4Q3MBR4-F1-model_v4 Acyl-CoA dehydrogenase 0.9836 2 351 GO:0003995
GO:0050660
AF-A0A443IHP2-F1-model_v4 Acyl-CoA dehydrogenase 0.983 1 351 GO:0003995
GO:0050660

Map