F410079

General Info

Members Datasets Scaffolds Average Seq Length
330 178 660 381

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10032461|Ga0157378_100324613
Length 424
Sequence MQFIDIKQYNYGIGIARYCIKILYMDTEITQEVLVQKRKKTTLYIVIAIAAIALGIWLIRTFLNSSVVRSEINIAKVETGSVENTLNATGEVLPEFEEIITSPVNASIKNVVTDAGGKVKPGQSILTLDKSASENDYSKLKFQLEKSYFDIQSNNDIKQLRIGNLTDAVENAKRLYKAGGGTREDIEQAELNLKVALLEKKQIENEVRSKQKTMLIEEKEAEIAAAIQENDLKELDRKLKLANVVATRSGVVTFINRNIGANIKEGETLARIADLSSFKVTGSLSDTYLDQLHNGMPVIVRINDTQLRGVVSNVYPAVQNGIITFDIQLDERNNKQLRPNMKVDVFLVTAVHNKVLRVANGAAFKGASPQDVFVVNGNKAEKHTVHTGLSNFDYVELIDGVKEGDMVITSDMTEYKNAKELSIK

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
116 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
120 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
137 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
141 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
158 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
159 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
160 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
163 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
166 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
167 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
168 2738541302 Pedobacter sp. CF074 Isolate Unclassified
169 2818991437 Pedobacter terrae 518 Isolate Unclassified
170 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
171 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
172 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
173 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
174 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
175 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
176 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
177 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
178 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.36
Metatranscriptomes 0
Isolates 3.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.58
Nodule 0
Rhizoplane 0.61
Rhizosphere 84.55
Stem 0
Stem Tuber 0
Unclassified 5.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10032461 3300013297 Bacteria 4613
2 JGI24740J21852_10014375 3300001979 Bacteria 2922
3 JGI24739J22299_10004869 3300001989 Bacteria 5118
4 JGI24739J22299_10020550 3300001989 Bacteria 2358
5 JGI24737J22298_10000041 3300001990 Bacteria 37211
6 JGI24735J21928_10000001 3300002067 Bacteria 650042
7 JGI25162J39368_1000121 3300002737 Bacteria 85899
8 JGI25164J39214_1002133 3300002772 Bacteria 3337
9 JGI25406J46586_10025914 3300003203 Bacteria 2269
10 JGI25165J46597_1001237 3300003214 Bacteria 15127
11 rootH1_10049259 3300003316 Bacteria 11540
12 rootH2_10000343 3300003320 Bacteria 102217
13 rootH2_10165487 3300003320 Bacteria 3469
14 rootH2_10234410 3300003320 Bacteria 1497
15 rootH1_10001370 3300003323 Bacteria 113238
16 rootH1_10063115 3300003323 Bacteria 5032
17 Ga0055542_1002920 3300003762 Bacteria 5038
18 Ga0065714_10064508 3300005288 Bacteria 46035
19 Ga0070658_10000080 3300005327 Bacteria 90682
20 Ga0070658_10131436 3300005327 Bacteria 2086
21 Ga0070676_10000140 3300005328 Bacteria 27970
22 Ga0070683_100021523 3300005329 Bacteria 5755
23 Ga0070683_100136139 3300005329 Bacteria 2326
24 Ga0070670_100060571 3300005331 Unclassified 3250
25 Ga0070670_100169682 3300005331 Bacteria 1892
26 Ga0068869_100075736 3300005334 Unclassified 2501
27 Ga0070666_10000042 3300005335 Bacteria 112296
28 Ga0070666_10025999 3300005335 Bacteria 3820
29 Ga0070666_10031561 3300005335 Bacteria 3497
30 Ga0070660_100017744 3300005339 Bacteria 5191
31 Ga0070668_100026530 3300005347 Bacteria 4397
32 Ga0070669_100063268 3300005353 Bacteria 2723
33 Ga0070671_100036952 3300005355 Bacteria 4049
34 Ga0070674_100090399 3300005356 Bacteria 2208
35 Ga0070673_100019435 3300005364 Bacteria 4875
36 Ga0070659_100005576 3300005366 Bacteria 9044
37 Ga0070659_100013275 3300005366 Bacteria 6126
38 Ga0070659_100128533 3300005366 Bacteria 2056
39 Ga0070667_100040632 3300005367 Bacteria 3900
40 Ga0070667_100059343 3300005367 Bacteria 3236
41 Ga0070663_100013106 3300005455 Bacteria 5270
42 Ga0070678_100007973 3300005456 Bacteria 6314
43 Ga0070678_100185115 3300005456 Unclassified 1708
44 Ga0070662_100000081 3300005457 Bacteria 53265
45 Ga0070662_100015275 3300005457 Bacteria 5140
46 Ga0070681_10337385 3300005458 Bacteria 1417
47 Ga0068867_100000843 3300005459 Bacteria 20637
48 Ga0070684_100018970 3300005535 Bacteria 5680
49 Ga0068853_100023658 3300005539 Bacteria 5146
50 Ga0068853_100076495 3300005539 Bacteria 2923
51 Ga0068853_100117498 3300005539 Bacteria 2369
52 Ga0068853_100137059 3300005539 Bacteria 2195
53 Ga0068853_100217520 3300005539 Unclassified 1743
54 Ga0070665_100000001 3300005548 Bacteria 1083363
55 Ga0070665_100000072 3300005548 Bacteria 198575
56 Ga0068855_100000090 3300005563 Bacteria 110528
57 Ga0068855_100006355 3300005563 Bacteria 14401
58 Ga0068855_100007153 3300005563 Bacteria 13546
59 Ga0068855_100013657 3300005563 Bacteria 9794
60 Ga0068855_100033309 3300005563 Bacteria 6150
61 Ga0070664_100049893 3300005564 Bacteria 3540
62 Ga0068857_100014160 3300005577 Bacteria 6946
63 Ga0068857_100045029 3300005577 Bacteria 3913
64 Ga0068857_100306205 3300005577 Bacteria 1465
65 Ga0068854_100152142 3300005578 Bacteria 1785
66 Ga0068856_100000129 3300005614 Bacteria 76536
67 Ga0068856_100028219 3300005614 Bacteria 5479
68 Ga0068856_100197638 3300005614 Bacteria 2025
69 Ga0068852_100000281 3300005616 Bacteria 33979
70 Ga0068852_100042142 3300005616 Bacteria 3863
71 Ga0068852_100079217 3300005616 Bacteria 2910
72 Ga0068852_100143850 3300005616 Bacteria 2210
73 Ga0068859_100000130 3300005617 Bacteria 71018
74 Ga0068859_100006358 3300005617 Bacteria 11987
75 Ga0068864_100002546 3300005618 Bacteria 15048
76 Ga0068864_100227158 3300005618 Bacteria 1725
77 Ga0068866_10061756 3300005718 Bacteria 1947
78 Ga0068863_100008085 3300005841 Bacteria 10273
79 Ga0068858_100003098 3300005842 Bacteria 16637
80 Ga0068860_100001453 3300005843 Bacteria 25628
81 Ga0068860_100002504 3300005843 Bacteria 19274
82 Ga0068860_100062718 3300005843 Bacteria 3532
83 Ga0081539_10000337 3300005985 Bacteria 103868
84 Ga0097621_100000039 3300006237 Bacteria 67231
85 Ga0097621_100000081 3300006237 Bacteria 50723
86 Ga0097621_100009477 3300006237 Bacteria 7069
87 Ga0068871_100000300 3300006358 Bacteria 34429
88 Ga0068871_100002549 3300006358 Bacteria 12434
89 Ga0068871_100089782 3300006358 Bacteria 2558
90 Ga0068865_100000180 3300006881 Bacteria 35127
91 Ga0097620_100000130 3300006931 Bacteria 71018
92 Ga0097620_100006358 3300006931 Bacteria 11987
93 Ga0105240_10000283 3300009093 Bacteria 99553
94 Ga0105240_10030786 3300009093 Bacteria 6971
95 Ga0105240_10053838 3300009093 Bacteria 5047
96 Ga0105240_10086925 3300009093 Bacteria 3829
97 Ga0105240_10090198 3300009093 Bacteria 3747
98 Ga0105240_10240544 3300009093 Bacteria 2099
99 Ga0105240_10379927 3300009093 Bacteria 1596
100 Ga0105241_10000514 3300009174 Bacteria 29151
101 Ga0105241_10001533 3300009174 Bacteria 17705
102 Ga0105241_10003973 3300009174 Bacteria 10930
103 Ga0105241_10006553 3300009174 Bacteria 8581
104 Ga0105242_10146326 3300009176 Bacteria 2056
105 Ga0105242_10182630 3300009176 Unclassified 1852
106 Ga0105248_10029375 3300009177 Bacteria 6132
107 Ga0105237_10000963 3300009545 Bacteria 38740
108 Ga0105237_10001962 3300009545 Bacteria 26195
109 Ga0105237_10009372 3300009545 Bacteria 10489
110 Ga0105237_10013274 3300009545 Bacteria 8642
111 Ga0105237_10022043 3300009545 Bacteria 6537
112 Ga0105237_10142380 3300009545 Bacteria 2392
113 Ga0105237_10382539 3300009545 Bacteria 1412
114 Ga0105238_10002377 3300009551 Bacteria 18888
115 Ga0105238_10008637 3300009551 Bacteria 10194
116 Ga0105249_10004268 3300009553 Bacteria 12351
117 Ga0105249_10012134 3300009553 Bacteria 7584
118 Ga0105239_10000013 3300010375 Bacteria 327371
119 Ga0105239_10000106 3300010375 Bacteria 117256
120 Ga0105239_10000132 3300010375 Bacteria 105380
121 Ga0105239_10000528 3300010375 Bacteria 55243
122 Ga0105239_10001538 3300010375 Bacteria 30493
123 Ga0105239_10019666 3300010375 Bacteria 7454
124 Ga0105239_10094693 3300010375 Unclassified 3299
125 Ga0105239_10143737 3300010375 Unclassified 2659
126 Ga0105239_10170187 3300010375 Bacteria 2436
127 Ga0105246_10035008 3300011119 Bacteria 3352
128 Ga0157371_10000050 3300013102 Bacteria 183160
129 Ga0157371_10035312 3300013102 Unclassified 3583
130 Ga0157370_10061444 3300013104 Bacteria 3566
131 Ga0157370_10085792 3300013104 Bacteria 2958
132 Ga0157370_10136643 3300013104 Bacteria 2284
133 Ga0157369_10001695 3300013105 Bacteria 26849
134 Ga0157369_10019275 3300013105 Bacteria 7632
135 Ga0157369_10025169 3300013105 Bacteria 6608
136 Ga0157374_10000007 3300013296 Bacteria 595643
137 Ga0157374_10000135 3300013296 Bacteria 67340
138 Ga0157374_10003320 3300013296 Bacteria 13514
139 Ga0157374_10012517 3300013296 Bacteria 7384
140 Ga0157374_10051431 3300013296 Bacteria 3834
141 Ga0157374_10142829 3300013296 Bacteria 2324
142 Ga0157378_10009998 3300013297 Bacteria 8274
143 Ga0157378_10024654 3300013297 Bacteria 5296
144 Ga0157378_10069048 3300013297 Bacteria 3169
145 Ga0157378_10246505 3300013297 Unclassified 1709
146 Ga0163162_10000097 3300013306 Bacteria 79518
147 Ga0163162_10000899 3300013306 Bacteria 27700
148 Ga0163162_10003016 3300013306 Bacteria 16084
149 Ga0163162_10006867 3300013306 Bacteria 11044
150 Ga0163162_10034194 3300013306 Bacteria 5056
151 Ga0163162_10063136 3300013306 Bacteria 3745
152 Ga0157372_10000011 3300013307 Bacteria 277202
153 Ga0157372_10001527 3300013307 Bacteria 25162
154 Ga0157372_10054545 3300013307 Bacteria 4459
155 Ga0157372_10079591 3300013307 Bacteria 3706
156 Ga0157372_10128086 3300013307 Unclassified 2919
157 Ga0157375_10000250 3300013308 Bacteria 49016
158 Ga0157375_10149061 3300013308 Bacteria 2473
159 Ga0163163_10000389 3300014325 Bacteria 41878
160 Ga0163163_10037815 3300014325 Bacteria 4697
161 Ga0157377_10173899 3300014745 Bacteria 1349
162 Ga0157379_10197403 3300014968 Bacteria 1819
163 Ga0157376_10000374 3300014969 Bacteria 29126
164 Ga0157376_10003324 3300014969 Bacteria 11067
165 Ga0157376_10021392 3300014969 Bacteria 5022
166 Ga0157376_10026381 3300014969 Bacteria 4591
167 Ga0157376_10324706 3300014969 Bacteria 1464
168 Ga0182006_1000166 3300015261 Bacteria 69787
169 Ga0163161_10000215 3300017792 Bacteria 52730
170 Ga0163161_10000574 3300017792 Bacteria 29528
171 Ga0163161_10015258 3300017792 Bacteria 5354
172 Ga0163161_10017912 3300017792 Bacteria 4963
173 Ga0213876_10006617 3300021384 Bacteria 6321
174 Ga0207427_100125 3300025231 Bacteria 96142
175 Ga0209437_100008 3300025233 Bacteria 921142
176 Ga0209437_100017 3300025233 Bacteria 694471
177 Ga0209258_100029 3300025242 Bacteria 490648
178 Ga0209148_1000163 3300025254 Bacteria 137449
179 Ga0209233_1000024 3300025261 Bacteria 695418
180 Ga0209455_1008409 3300025272 Bacteria 2808
181 Ga0209564_1004937 3300025295 Bacteria 7884
182 Ga0209758_1014884 3300025297 Bacteria 4085
183 Ga0207680_10000228 3300025903 Bacteria 27141
184 Ga0207647_10000028 3300025904 Bacteria 109750
185 Ga0207647_10000058 3300025904 Bacteria 84631
186 Ga0207645_10001698 3300025907 Bacteria 17878
187 Ga0207705_10000035 3300025909 Bacteria 201649
188 Ga0207654_10006862 3300025911 Bacteria 5731
189 Ga0207654_10017773 3300025911 Bacteria 3723
190 Ga0207654_10021650 3300025911 Bacteria 3421
191 Ga0207695_10000684 3300025913 Bacteria 66519
192 Ga0207695_10016050 3300025913 Bacteria 8786
193 Ga0207695_10152341 3300025913 Bacteria 2250
194 Ga0207671_10001126 3300025914 Bacteria 32182
195 Ga0207671_10001753 3300025914 Bacteria 24394
196 Ga0207671_10002886 3300025914 Bacteria 17795
197 Ga0207671_10003445 3300025914 Bacteria 15761
198 Ga0207671_10005976 3300025914 Bacteria 11017
199 Ga0207671_10006546 3300025914 Bacteria 10353
200 Ga0207671_10041003 3300025914 Bacteria 3426
201 Ga0207657_10008412 3300025919 Bacteria 10474
202 Ga0207681_10014927 3300025923 Unclassified 4838
203 Ga0207650_10140623 3300025925 Unclassified 1897
204 Ga0207644_10026621 3300025931 Bacteria 3987
205 Ga0207690_10010265 3300025932 Bacteria 5562
206 Ga0207690_10118502 3300025932 Bacteria 1919
207 Ga0207706_10000147 3300025933 Bacteria 76792
208 Ga0207706_10003522 3300025933 Bacteria 14949
209 Ga0207669_10130569 3300025937 Bacteria 1725
210 Ga0207704_10000076 3300025938 Bacteria 61793
211 Ga0207689_10027846 3300025942 Bacteria 4728
212 Ga0207667_10000009 3300025949 Bacteria 603135
213 Ga0207667_10007095 3300025949 Bacteria 13527
214 Ga0207667_10007728 3300025949 Bacteria 12855
215 Ga0207667_10059954 3300025949 Bacteria 3984
216 Ga0207667_10374892 3300025949 Bacteria 1450
217 Ga0207651_10013810 3300025960 Bacteria 4637
218 Ga0207658_10067365 3300025986 Unclassified 2696
219 Ga0207658_10166061 3300025986 Bacteria 1813
220 Ga0207639_10012990 3300026041 Bacteria 5813
221 Ga0207639_10040244 3300026041 Bacteria 3487
222 Ga0207639_10095357 3300026041 Bacteria 2391
223 Ga0207639_10120092 3300026041 Bacteria 2158
224 Ga0207678_10116375 3300026067 Unclassified 2281
225 Ga0207702_10000300 3300026078 Bacteria 57198
226 Ga0207702_10036631 3300026078 Bacteria 4104
227 Ga0207702_10043918 3300026078 Bacteria 3754
228 Ga0207641_10000158 3300026088 Bacteria 96378
229 Ga0207641_10035651 3300026088 Bacteria 4147
230 Ga0207648_10000648 3300026089 Bacteria 39101
231 Ga0207676_10227972 3300026095 Bacteria 1664
232 Ga0207674_10045717 3300026116 Bacteria 4501
233 Ga0207674_10181769 3300026116 Bacteria 2054
234 Ga0207683_10038383 3300026121 Bacteria 4174
235 Ga0207698_10024115 3300026142 Bacteria 4264
236 Ga0268266_10000089 3300028379 Bacteria 198566
237 Ga0268266_10000232 3300028379 Bacteria 95941
238 Ga0268264_10001350 3300028381 Bacteria 23002
239 Ga0268264_10002631 3300028381 Bacteria 15680
240 Ga0268264_10028914 3300028381 Bacteria 4538
241 Ga0307517_10054271 3300028786 Bacteria 3967
242 Ga0307515_10000246 3300028794 Bacteria 134348
243 Ga0307515_10000707 3300028794 Bacteria 76907
244 Ga0307515_10000993 3300028794 Bacteria 64832
245 Ga0265327_10054723 3300031251 Bacteria 2064
246 Ga0307516_10000189 3300031730 Bacteria 79794
247 Ga0307516_10237326 3300031730 Bacteria 1524
248 Ga0307507_10001380 3300033179 Bacteria 54486
249 Ga0307507_10111438 3300033179 Unclassified 2234
250 Ga0307510_10001267 3300033180 Bacteria 27507
251 Ga0307510_10004144 3300033180 Bacteria 17022
252 Ga0395899_0000188 3300037312 Bacteria 90869
253 Ga0395899_0000888 3300037312 Bacteria 28385
254 Ga0395900_0000226 3300037418 Bacteria 88588
255 Ga0395898_0004590 3300037466 Bacteria 15073
256 Ga0395905_0000068 3300037471 Bacteria 177163
257 Ga0395905_0135357 3300037471 Bacteria 2318
258 Ga0395901_0000136 3300038443 Bacteria 95382
259 Ga0436365_1732514 3300039437 Bacteria 16095
260 Ga0436361_0803447 3300039447 Bacteria 4486
261 Ga0466961_0035312 3300044693 Unclassified 3211
262 Ga0466970_0064266 3300044765 Bacteria 1968
263 Ga0466957_0136612 3300044842 Bacteria 1576
264 Ga0466959_0008498 3300045049 Bacteria 7265
265 Ga0495629_0075799 3300046459 Bacteria 2349
266 Ga0495638_0025709 3300046460 Unclassified 3823
267 Ga0495638_0064426 3300046460 Bacteria 2258
268 Ga0495638_0070445 3300046460 Bacteria 2141
269 Ga0495651_0112636 3300046462 Bacteria 2010
270 Ga0495650_0000273 3300046471 Bacteria 98757
271 Ga0495650_0060937 3300046471 Bacteria 1513
272 Ga0495585_0000132 3300046492 Bacteria 80905
273 Ga0495596_0043555 3300046500 Bacteria 1769
274 Ga0495606_0000130 3300046507 Bacteria 127805
275 Ga0495606_0011133 3300046507 Bacteria 7373
276 Ga0495606_0011872 3300046507 Bacteria 7047
277 Ga0495606_0014555 3300046507 Bacteria 6125
278 Ga0495606_0017582 3300046507 Bacteria 5398
279 Ga0495610_0000151 3300046512 Bacteria 76854
280 Ga0495610_0002033 3300046512 Bacteria 17292
281 Ga0495616_0002729 3300046513 Bacteria 11555
282 Ga0495631_0005500 3300046518 Bacteria 6623
283 Ga0495648_0026339 3300046524 Bacteria 3916
284 Ga0495609_0032890 3300046538 Bacteria 2354
285 Ga0495633_0000035 3300046558 Bacteria 185403
286 Ga0495633_0009219 3300046558 Bacteria 5471
287 Ga0495668_0000032 3300046616 Bacteria 254951
288 Ga0495625_0000036 3300046660 Bacteria 221680
289 Ga0495625_0000227 3300046660 Bacteria 88834
290 Ga0495625_0000358 3300046660 Bacteria 69690
291 Ga0495625_0012165 3300046660 Bacteria 6983
292 Ga0495661_0001031 3300046665 Bacteria 24752
293 Ga0495661_0009854 3300046665 Bacteria 6534
294 Ga0495661_0048123 3300046665 Bacteria 2592
295 Ga0495661_0117311 3300046665 Unclassified 1475
296 Ga0495649_0000017 3300046694 Bacteria 221685
297 Ga0495660_0005464 3300046810 Bacteria 7612
298 Ga0495687_000001 3300047443 Bacteria 1215582
299 Ga0495687_002988 3300047443 Bacteria 12791
300 Ga0495687_005612 3300047443 Bacteria 7932
301 Ga0495677_0006183 3300047445 Bacteria 4523
302 Ga0495685_062907 3300047447 Bacteria 1249
303 Ga0495686_0000083 3300047472 Bacteria 198933
304 Ga0495686_0022968 3300047472 Bacteria 4120
305 Ga0495686_0033922 3300047472 Bacteria 3291
306 Ga0496114_0093837 3300048917 Unclassified 2552
307 Ga0500578_0160949 3300053086 Bacteria 1393
308 Ga0500644_0000528 3300053088 Bacteria 16038
309 Ga0500646_0004338 3300053090 Bacteria 3590
310 Ga0500583_0000367 3300053092 Bacteria 14822
311 Ga0500569_001854 3300053109 Bacteria 4072
312 Ga0500608_000502 3300053122 Bacteria 14608
313 Ga0500618_000004 3300053125 Bacteria 293180
314 Ga0500642_0003131 3300053130 Bacteria 4963
315 Ga0500577_0001759 3300053142 Bacteria 5532
316 Ga0500622_0006039 3300053156 Bacteria 7117
317 Ga0500633_0001643 3300053160 Bacteria 4324
318 Ga0500611_001990 3300053727 Bacteria 2370
319 2599477145 2599185184 Bacteria 6430550
320 2738855152 2738541302 Bacteria 5944758
321 2819547834 2818991437 Bacteria 5805520
322 2852623551 2852623160 Bacteria 4376875
323 2884937547 2884933994 Bacteria 4535041
324 2896090019 2896085136 Bacteria 6129793
325 2896110561 2896109856 Bacteria 7140722
326 2919442077 2919437846 Bacteria 6199444
327 2928079058 2928078545 Bacteria 6534839
328 2928148571 2928147474 Bacteria 6512076
329 2929239494 2929239360 Bacteria 7745570
330 2932085865 2932082852 Bacteria 6563563
331 Ga0157378_10032461
332 JGI24740J21852_10014375
333 JGI24739J22299_10004869
334 JGI24739J22299_10020550
335 JGI24737J22298_10000041
336 JGI24735J21928_10000001
337 JGI25162J39368_1000121
338 JGI25164J39214_1002133
339 JGI25406J46586_10025914
340 JGI25165J46597_1001237
341 rootH1_10049259
342 rootH2_10000343
343 rootH2_10165487
344 rootH2_10234410
345 rootH1_10001370
346 rootH1_10063115
347 Ga0055542_1002920
348 Ga0065714_10064508
349 Ga0070658_10000080
350 Ga0070658_10131436
351 Ga0070676_10000140
352 Ga0070683_100021523
353 Ga0070683_100136139
354 Ga0070670_100060571
355 Ga0070670_100169682
356 Ga0068869_100075736
357 Ga0070666_10000042
358 Ga0070666_10025999
359 Ga0070666_10031561
360 Ga0070660_100017744
361 Ga0070668_100026530
362 Ga0070669_100063268
363 Ga0070671_100036952
364 Ga0070674_100090399
365 Ga0070673_100019435
366 Ga0070659_100005576
367 Ga0070659_100013275
368 Ga0070659_100128533
369 Ga0070667_100040632
370 Ga0070667_100059343
371 Ga0070663_100013106
372 Ga0070678_100007973
373 Ga0070678_100185115
374 Ga0070662_100000081
375 Ga0070662_100015275
376 Ga0070681_10337385
377 Ga0068867_100000843
378 Ga0070684_100018970
379 Ga0068853_100023658
380 Ga0068853_100076495
381 Ga0068853_100117498
382 Ga0068853_100137059
383 Ga0068853_100217520
384 Ga0070665_100000001
385 Ga0070665_100000072
386 Ga0068855_100000090
387 Ga0068855_100006355
388 Ga0068855_100007153
389 Ga0068855_100013657
390 Ga0068855_100033309
391 Ga0070664_100049893
392 Ga0068857_100014160
393 Ga0068857_100045029
394 Ga0068857_100306205
395 Ga0068854_100152142
396 Ga0068856_100000129
397 Ga0068856_100028219
398 Ga0068856_100197638
399 Ga0068852_100000281
400 Ga0068852_100042142
401 Ga0068852_100079217
402 Ga0068852_100143850
403 Ga0068859_100000130
404 Ga0068859_100006358
405 Ga0068864_100002546
406 Ga0068864_100227158
407 Ga0068866_10061756
408 Ga0068863_100008085
409 Ga0068858_100003098
410 Ga0068860_100001453
411 Ga0068860_100002504
412 Ga0068860_100062718
413 Ga0081539_10000337
414 Ga0097621_100000039
415 Ga0097621_100000081
416 Ga0097621_100009477
417 Ga0068871_100000300
418 Ga0068871_100002549
419 Ga0068871_100089782
420 Ga0068865_100000180
421 Ga0097620_100000130
422 Ga0097620_100006358
423 Ga0105240_10000283
424 Ga0105240_10030786
425 Ga0105240_10053838
426 Ga0105240_10086925
427 Ga0105240_10090198
428 Ga0105240_10240544
429 Ga0105240_10379927
430 Ga0105241_10000514
431 Ga0105241_10001533
432 Ga0105241_10003973
433 Ga0105241_10006553
434 Ga0105242_10146326
435 Ga0105242_10182630
436 Ga0105248_10029375
437 Ga0105237_10000963
438 Ga0105237_10001962
439 Ga0105237_10009372
440 Ga0105237_10013274
441 Ga0105237_10022043
442 Ga0105237_10142380
443 Ga0105237_10382539
444 Ga0105238_10002377
445 Ga0105238_10008637
446 Ga0105249_10004268
447 Ga0105249_10012134
448 Ga0105239_10000013
449 Ga0105239_10000106
450 Ga0105239_10000132
451 Ga0105239_10000528
452 Ga0105239_10001538
453 Ga0105239_10019666
454 Ga0105239_10094693
455 Ga0105239_10143737
456 Ga0105239_10170187
457 Ga0105246_10035008
458 Ga0157371_10000050
459 Ga0157371_10035312
460 Ga0157370_10061444
461 Ga0157370_10085792
462 Ga0157370_10136643
463 Ga0157369_10001695
464 Ga0157369_10019275
465 Ga0157369_10025169
466 Ga0157374_10000007
467 Ga0157374_10000135
468 Ga0157374_10003320
469 Ga0157374_10012517
470 Ga0157374_10051431
471 Ga0157374_10142829
472 Ga0157378_10009998
473 Ga0157378_10024654
474 Ga0157378_10069048
475 Ga0157378_10246505
476 Ga0163162_10000097
477 Ga0163162_10000899
478 Ga0163162_10003016
479 Ga0163162_10006867
480 Ga0163162_10034194
481 Ga0163162_10063136
482 Ga0157372_10000011
483 Ga0157372_10001527
484 Ga0157372_10054545
485 Ga0157372_10079591
486 Ga0157372_10128086
487 Ga0157375_10000250
488 Ga0157375_10149061
489 Ga0163163_10000389
490 Ga0163163_10037815
491 Ga0157377_10173899
492 Ga0157379_10197403
493 Ga0157376_10000374
494 Ga0157376_10003324
495 Ga0157376_10021392
496 Ga0157376_10026381
497 Ga0157376_10324706
498 Ga0182006_1000166
499 Ga0163161_10000215
500 Ga0163161_10000574
501 Ga0163161_10015258
502 Ga0163161_10017912
503 Ga0213876_10006617
504 Ga0207427_100125
505 Ga0209437_100008
506 Ga0209437_100017
507 Ga0209258_100029
508 Ga0209148_1000163
509 Ga0209233_1000024
510 Ga0209455_1008409
511 Ga0209564_1004937
512 Ga0209758_1014884
513 Ga0207680_10000228
514 Ga0207647_10000028
515 Ga0207647_10000058
516 Ga0207645_10001698
517 Ga0207705_10000035
518 Ga0207654_10006862
519 Ga0207654_10017773
520 Ga0207654_10021650
521 Ga0207695_10000684
522 Ga0207695_10016050
523 Ga0207695_10152341
524 Ga0207671_10001126
525 Ga0207671_10001753
526 Ga0207671_10002886
527 Ga0207671_10003445
528 Ga0207671_10005976
529 Ga0207671_10006546
530 Ga0207671_10041003
531 Ga0207657_10008412
532 Ga0207681_10014927
533 Ga0207650_10140623
534 Ga0207644_10026621
535 Ga0207690_10010265
536 Ga0207690_10118502
537 Ga0207706_10000147
538 Ga0207706_10003522
539 Ga0207669_10130569
540 Ga0207704_10000076
541 Ga0207689_10027846
542 Ga0207667_10000009
543 Ga0207667_10007095
544 Ga0207667_10007728
545 Ga0207667_10059954
546 Ga0207667_10374892
547 Ga0207651_10013810
548 Ga0207658_10067365
549 Ga0207658_10166061
550 Ga0207639_10012990
551 Ga0207639_10040244
552 Ga0207639_10095357
553 Ga0207639_10120092
554 Ga0207678_10116375
555 Ga0207702_10000300
556 Ga0207702_10036631
557 Ga0207702_10043918
558 Ga0207641_10000158
559 Ga0207641_10035651
560 Ga0207648_10000648
561 Ga0207676_10227972
562 Ga0207674_10045717
563 Ga0207674_10181769
564 Ga0207683_10038383
565 Ga0207698_10024115
566 Ga0268266_10000089
567 Ga0268266_10000232
568 Ga0268264_10001350
569 Ga0268264_10002631
570 Ga0268264_10028914
571 Ga0307517_10054271
572 Ga0307515_10000246
573 Ga0307515_10000707
574 Ga0307515_10000993
575 Ga0265327_10054723
576 Ga0307516_10000189
577 Ga0307516_10237326
578 Ga0307507_10001380
579 Ga0307507_10111438
580 Ga0307510_10001267
581 Ga0307510_10004144
582 Ga0395899_0000188
583 Ga0395899_0000888
584 Ga0395900_0000226
585 Ga0395898_0004590
586 Ga0395905_0000068
587 Ga0395905_0135357
588 Ga0395901_0000136
589 Ga0436365_1732514
590 Ga0436361_0803447
591 Ga0466961_0035312
592 Ga0466970_0064266
593 Ga0466957_0136612
594 Ga0466959_0008498
595 Ga0495629_0075799
596 Ga0495638_0025709
597 Ga0495638_0064426
598 Ga0495638_0070445
599 Ga0495651_0112636
600 Ga0495650_0000273
601 Ga0495650_0060937
602 Ga0495585_0000132
603 Ga0495596_0043555
604 Ga0495606_0000130
605 Ga0495606_0011133
606 Ga0495606_0011872
607 Ga0495606_0014555
608 Ga0495606_0017582
609 Ga0495610_0000151
610 Ga0495610_0002033
611 Ga0495616_0002729
612 Ga0495631_0005500
613 Ga0495648_0026339
614 Ga0495609_0032890
615 Ga0495633_0000035
616 Ga0495633_0009219
617 Ga0495668_0000032
618 Ga0495625_0000036
619 Ga0495625_0000227
620 Ga0495625_0000358
621 Ga0495625_0012165
622 Ga0495661_0001031
623 Ga0495661_0009854
624 Ga0495661_0048123
625 Ga0495661_0117311
626 Ga0495649_0000017
627 Ga0495660_0005464
628 Ga0495687_000001
629 Ga0495687_002988
630 Ga0495687_005612
631 Ga0495677_0006183
632 Ga0495685_062907
633 Ga0495686_0000083
634 Ga0495686_0022968
635 Ga0495686_0033922
636 Ga0496114_0093837
637 Ga0500578_0160949
638 Ga0500644_0000528
639 Ga0500646_0004338
640 Ga0500583_0000367
641 Ga0500569_001854
642 Ga0500608_000502
643 Ga0500618_000004
644 Ga0500642_0003131
645 Ga0500577_0001759
646 Ga0500622_0006039
647 Ga0500633_0001643
648 Ga0500611_001990
649 2599477145
650 2738855152
651 2819547834
652 2852623551
653 2884937547
654 2896090019
655 2896110561
656 2919442077
657 2928079058
658 2928148571
659 2929239494
660 2932085865

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

243

340

0.92

PF12700

HlyD_2

HlyD family secretion protein

31

384

0.76

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

81

343

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9578 61 91
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9561 61 91
7wta-assembly1.cif.gz_D cryo-em structure of human pyruvate carboxylase in apo state 0.905 61 91
7qep-assembly1.cif.gz_O5 cryo-em structure of the ribosome from encephalitozoon cuniculi 0.9029 131 182
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.8902 58 247
ID Description Score Start End Superfamily
af_P32327_1093_1173_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9363 61 91 2.40.50.100
af_P9WPQ3_584_653_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.922 58 91 2.40.50.100
4tkoB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9167 58 248 2.40.50.100
1vf7M03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9045 126 183 1.10.287.470
4tkoB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9037 58 248 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A841J8W9-F1-model_v4 HlyD family secretion protein 0.9021 1 398 GO:0016020
GO:0030313
AF-A0A841J8W9-F1-model_v4 HlyD family secretion protein 0.8957 1 398 GO:0016020
GO:0030313
AF-A0A2E9UJD1-F1-model_v4 Membrane fusion protein biotin-lipoyl like domain-containing protein 0.7747 56 237 GO:0030313
AF-A0A1C7DLU2-F1-model_v4 Phage shock protein A 0.7425 93 216
AF-A0A4Z0NA79-F1-model_v4 Membrane fusion protein biotin-lipoyl like domain-containing protein 0.7248 52 254 GO:0005886

Map