F410081

General Info

Members Datasets Scaffolds Average Seq Length
330 224 659 275

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10118367|Ga0163162_101183673
Length 320
Sequence MTNFFLSLLFYPFTLTPLCISITRFCINYPGQAQIPLLYKLIQKTKAMSKTIFITGASRGFGKLWAEAFLKRGDKVVATARNLDTLTDLVSTYGDAILPIQLDVNNREADFAAIEQAKQHFGTIDVLINNAGYGLFGTIEETSEQEAREQIETNVFGLLWLTQGVLQVMRAQGHGHIIQVSSVLGLATLPVLGLYNASKFAVEGLSETLATEVGGFGIKVSLIEPNGFATDWAGASATHTQVLPEYEGVRAAFQAGLTDTDAFGVPEATSEAVLKLVDSANPPLRLFLGKVALPWVKQVYEQRLASWEEWQPVAAAAHGK

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
74 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
124 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
134 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
140 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
141 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
150 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
151 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
161 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
162 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
167 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
168 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
169 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
170 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
171 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
172 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
173 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
177 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
178 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
179 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
181 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
184 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
190 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
191 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
192 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
193 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
194 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
195 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
196 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
197 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
198 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
199 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
200 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
201 2818991444 Filimonas endophytica 3197 Isolate Unclassified
202 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
203 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
204 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
205 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
206 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
207 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
208 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
209 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
210 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
211 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
212 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
213 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
214 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
215 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
216 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
217 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
218 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
219 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
220 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
221 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
222 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
223 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
224 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.09
Metatranscriptomes 0
Isolates 10.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.48
Nodule 1.52
Rhizoplane 1.82
Rhizosphere 63.03
Stem 0
Stem Tuber 0
Unclassified 2.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10118367 3300013306 Bacteria 2751
2 MBSR1b_contig_12662825 2162886012 Bacteria 1004
3 LJNas_1001857 3300000546 Bacteria 2775
4 JGI25162J39368_1000055 3300002737 Bacteria 147236
5 JGI25162J39368_1000213 3300002737 Bacteria 60963
6 JGI25162J39368_1001865 3300002737 Bacteria 9726
7 JGI25164J39214_1000988 3300002772 Bacteria 8972
8 JGI25152J39213_1000119 3300002773 Bacteria 55075
9 JGI25152J39213_1007395 3300002773 Bacteria 2849
10 JGI25150J39212_1000015 3300002774 Bacteria 170613
11 JGI25150J39212_1003277 3300002774 Bacteria 3814
12 JGI25151J46595_10000043 3300003187 Bacteria 170613
13 JGI25165J46597_1001364 3300003214 Bacteria 13568
14 JGI25153J46596_10000009 3300003215 Bacteria 340925
15 JGI25153J46596_10051124 3300003215 Bacteria 1186
16 rootH1_10073219 3300003316 Bacteria 4878
17 rootH1_10073219 3300003323 Unclassified 3494
18 rootH1_10150524 3300003316 Bacteria 1605
19 rootH2_10040125 3300003320 Bacteria 4071
20 rootH2_10053388 3300003320 Bacteria 21563
21 rootH2_10282988 3300003320 Bacteria 2344
22 rootL2_10016075 3300003322 Bacteria 6092
23 rootL2_10030140 3300003322 Bacteria 3426
24 rootL2_10052296 3300003322 Bacteria 4563
25 rootL2_10176022 3300003322 Bacteria 3895
26 rootH1_10017777 3300003323 Bacteria 31426
27 rootH1_10044499 3300003323 Bacteria 10654
28 rootH1_10114723 3300003323 Bacteria 2287
29 rootH1_10127028 3300003323 Bacteria 5550
30 Ga0055531_10000067 3300003794 Bacteria 114289
31 Ga0065165_1002384 3300005262 Bacteria 16148
32 Ga0065714_10008701 3300005288 Bacteria 3014
33 Ga0065714_10102113 3300005288 Bacteria 1629
34 Ga0065714_10142855 3300005288 Bacteria 1159
35 Ga0065704_10071985 3300005289 Bacteria 9456
36 Ga0065704_10195095 3300005289 Bacteria 1171
37 Ga0065715_10196759 3300005293 Bacteria 1383
38 Ga0070658_10000028 3300005327 Bacteria 157278
39 Ga0070676_10002483 3300005328 Bacteria 9460
40 Ga0070683_100030557 3300005329 Bacteria 4892
41 Ga0068869_100020964 3300005334 Bacteria 4491
42 Ga0068868_100280069 3300005338 Bacteria 1411
43 Ga0070668_100440011 3300005347 Bacteria 1119
44 Ga0070671_100016893 3300005355 Bacteria 5904
45 Ga0070674_100152268 3300005356 Bacteria 1746
46 Ga0070673_100004946 3300005364 Bacteria 8490
47 Ga0070678_100014256 3300005456 Bacteria 5008
48 Ga0070662_100089274 3300005457 Bacteria 2312
49 Ga0070662_100287479 3300005457 Bacteria 1332
50 Ga0068867_100000990 3300005459 Bacteria 19370
51 Ga0068853_100038601 3300005539 Bacteria 4068
52 Ga0068853_100095893 3300005539 Bacteria 2616
53 Ga0068853_100782245 3300005539 Bacteria 913
54 Ga0068855_100027524 3300005563 Bacteria 6799
55 Ga0068854_100021048 3300005578 Bacteria 4422
56 Ga0068852_100001564 3300005616 Bacteria 15545
57 Ga0068852_100105764 3300005616 Bacteria 2550
58 Ga0068861_100591993 3300005719 Bacteria 1017
59 Ga0068870_10041753 3300005840 Bacteria 2385
60 Ga0068863_100497583 3300005841 Bacteria 1200
61 Ga0068860_100063710 3300005843 Bacteria 3501
62 Ga0075365_10094213 3300006038 Bacteria 2043
63 Ga0075362_10043071 3300006177 Bacteria 1998
64 Ga0075362_10102423 3300006177 Bacteria 1340
65 Ga0075367_10240798 3300006178 Bacteria 1134
66 Ga0075369_10041147 3300006186 Bacteria 1978
67 Ga0075366_10000656 3300006195 Bacteria 16263
68 Ga0097621_100001192 3300006237 Bacteria 18004
69 Ga0068871_100000088 3300006358 Bacteria 52878
70 Ga0068865_100001897 3300006881 Bacteria 12289
71 Ga0105251_10002137 3300009011 Bacteria 15887
72 Ga0105240_10000033 3300009093 Bacteria 279600
73 Ga0105240_10001336 3300009093 Bacteria 42397
74 Ga0105240_10001721 3300009093 Bacteria 36937
75 Ga0105240_10002159 3300009093 Bacteria 32133
76 Ga0105240_10652437 3300009093 Bacteria 1153
77 Ga0114129_10004516 3300009147 Bacteria 19639
78 Ga0105243_10222289 3300009148 Bacteria 1670
79 Ga0105241_10009258 3300009174 Bacteria 7242
80 Ga0105241_10115472 3300009174 Bacteria 2155
81 Ga0105242_10575371 3300009176 Bacteria 1084
82 Ga0105237_10000819 3300009545 Bacteria 42544
83 Ga0105237_10000948 3300009545 Bacteria 38981
84 Ga0105238_10171641 3300009551 Bacteria 2145
85 Ga0105239_10000327 3300010375 Bacteria 70423
86 Ga0105239_10006307 3300010375 Bacteria 13793
87 Ga0105239_10407842 3300010375 Bacteria 1538
88 Ga0105239_10720111 3300010375 Bacteria 1141
89 Ga0105246_10163625 3300011119 Bacteria 1697
90 Ga0105246_10251684 3300011119 Bacteria 1402
91 Ga0157373_10000063 3300013100 Bacteria 95201
92 Ga0157371_10000021 3300013102 Bacteria 301017
93 Ga0157371_10005458 3300013102 Bacteria 10719
94 Ga0157370_10000708 3300013104 Bacteria 41766
95 Ga0157370_10005342 3300013104 Bacteria 14431
96 Ga0157370_10007911 3300013104 Bacteria 11516
97 Ga0157370_10119635 3300013104 Bacteria 2459
98 Ga0157370_10127978 3300013104 Bacteria 2370
99 Ga0157374_10008877 3300013296 Bacteria 8608
100 Ga0157374_10235404 3300013296 Bacteria 1800
101 Ga0157378_10069328 3300013297 Bacteria 3163
102 Ga0157378_10161602 3300013297 Bacteria 2095
103 Ga0163162_10006492 3300013306 Bacteria 11324
104 Ga0157372_10002988 3300013307 Bacteria 18222
105 Ga0157372_10064024 3300013307 Bacteria 4125
106 Ga0157375_10043913 3300013308 Bacteria 4337
107 Ga0157375_10874765 3300013308 Bacteria 1044
108 Ga0157375_10886076 3300013308 Bacteria 1037
109 Ga0163163_10421128 3300014325 Bacteria 1394
110 Ga0157376_10044411 3300014969 Bacteria 3653
111 Ga0182006_1013142 3300015261 Bacteria 3600
112 Ga0163161_10001157 3300017792 Bacteria 19859
113 Ga0163161_10011227 3300017792 Bacteria 6205
114 Ga0213872_10019507 3300021361 Bacteria 3123
115 Ga0207427_100066 3300025231 Bacteria 165770
116 Ga0209437_100010 3300025233 Bacteria 838447
117 Ga0209437_100130 3300025233 Bacteria 183731
118 Ga0209437_100134 3300025233 Bacteria 178305
119 Ga0207425_1000023 3300025245 Bacteria 341339
120 Ga0207425_1003637 3300025245 Bacteria 4861
121 Ga0209026_1000453 3300025250 Bacteria 32465
122 Ga0209129_1000032 3300025258 Bacteria 341150
123 Ga0209233_1000017 3300025261 Bacteria 898076
124 Ga0209025_1000047 3300025294 Bacteria 341150
125 Ga0209025_1005143 3300025294 Bacteria 10850
126 Ga0209025_1046081 3300025294 Bacteria 1799
127 Ga0209758_1000144 3300025297 Bacteria 170724
128 Ga0209758_1000676 3300025297 Bacteria 50852
129 Ga0209758_1000818 3300025297 Bacteria 43757
130 Ga0209050_1029325 3300025298 Bacteria 1762
131 Ga0209257_1000004 3300025304 Bacteria 1678347
132 Ga0209257_1000005 3300025304 Bacteria 1592528
133 Ga0207713_1000022 3300025735 Bacteria 351775
134 Ga0207647_10006738 3300025904 Bacteria 8341
135 Ga0207645_10001268 3300025907 Bacteria 20776
136 Ga0207643_10135087 3300025908 Bacteria 1470
137 Ga0207705_10000045 3300025909 Bacteria 180625
138 Ga0207654_10098759 3300025911 Bacteria 1794
139 Ga0207695_10000023 3300025913 Bacteria 657903
140 Ga0207695_10004097 3300025913 Bacteria 20033
141 Ga0207671_10003807 3300025914 Bacteria 14789
142 Ga0207694_10256237 3300025924 Bacteria 1432
143 Ga0207706_10550404 3300025933 Bacteria 993
144 Ga0207709_10225899 3300025935 Bacteria 1353
145 Ga0207704_10000192 3300025938 Bacteria 32150
146 Ga0207689_10018802 3300025942 Bacteria 5827
147 Ga0207661_10045483 3300025944 Bacteria 3475
148 Ga0207667_10019424 3300025949 Bacteria 7588
149 Ga0207651_10031900 3300025960 Bacteria 3375
150 Ga0207668_10166300 3300025972 Bacteria 1725
151 Ga0207640_10137528 3300025981 Bacteria 1776
152 Ga0207677_10202710 3300026023 Bacteria 1578
153 Ga0207639_10022674 3300026041 Bacteria 4524
154 Ga0207639_10040771 3300026041 Bacteria 3468
155 Ga0207641_10588753 3300026088 Bacteria 1088
156 Ga0207648_10000287 3300026089 Bacteria 54959
157 Ga0207648_10201899 3300026089 Bacteria 1763
158 Ga0207683_10019900 3300026121 Bacteria 5736
159 Ga0268264_10038869 3300028381 Bacteria 3929
160 Ga0307517_10002201 3300028786 Bacteria 31538
161 Ga0307515_10000001 3300028794 Bacteria 4259510
162 Ga0307515_10000057 3300028794 Bacteria 261695
163 Ga0307515_10002588 3300028794 Bacteria 39033
164 Ga0307515_10079415 3300028794 Bacteria 4298
165 Ga0307511_10000294 3300030521 Bacteria 52689
166 Ga0265327_10000097 3300031251 Bacteria 193156
167 Ga0307513_10003577 3300031456 Bacteria 21002
168 Ga0307509_10027752 3300031507 Bacteria 6297
169 Ga0307408_100000608 3300031548 Bacteria 30646
170 Ga0307408_100000613 3300031548 Bacteria 30399
171 Ga0307408_100007497 3300031548 Bacteria 7215
172 Ga0307408_100010711 3300031548 Bacteria 6049
173 Ga0307516_10028541 3300031730 Bacteria 5646
174 Ga0307405_10000002 3300031731 Bacteria 575196
175 Ga0307405_10024318 3300031731 Bacteria 3458
176 Ga0307412_10000451 3300031911 Bacteria 24824
177 Ga0307412_10005356 3300031911 Bacteria 7199
178 Ga0307412_10092012 3300031911 Bacteria 2124
179 Ga0307412_10314878 3300031911 Unclassified 1243
180 Ga0307414_10006162 3300032004 Bacteria 6665
181 Ga0307414_10212432 3300032004 Bacteria 1582
182 Ga0307414_10352559 3300032004 Bacteria 1264
183 Ga0307510_10029715 3300033180 Bacteria 6214
184 Ga0307510_10033090 3300033180 Bacteria 5813
185 Ga0373941_0022036 3300035115 Bacteria 1804
186 Ga0395899_0003500 3300037312 Bacteria 12436
187 Ga0395900_0001762 3300037418 Bacteria 24846
188 Ga0395898_0008761 3300037466 Bacteria 10666
189 Ga0395905_0001720 3300037471 Bacteria 25699
190 Ga0395901_0005919 3300038443 Bacteria 12383
191 Ga0436361_0144116 3300039447 Bacteria 3131
192 Ga0451807_1663595 3300041486 Unclassified 1472
193 Ga0451843_0536839 3300041509 Unclassified 1326
194 Ga0451853_2360335 3300041512 Bacteria 1594
195 Ga0439457_009190 3300042014 Bacteria 2306
196 Ga0466972_0000015 3300044658 Bacteria 210687
197 Ga0466972_0000019 3300044658 Bacteria 198523
198 Ga0466968_0039137 3300044735 Bacteria 1995
199 Ga0466970_0072305 3300044765 Unclassified 1855
200 Ga0466957_0016154 3300044842 Bacteria 4364
201 Ga0495627_007233 3300046453 Bacteria 4276
202 Ga0495638_0000001 3300046460 Bacteria 1114121
203 Ga0495585_0077029 3300046492 Bacteria 1811
204 Ga0495596_0015686 3300046500 Bacteria 3165
205 Ga0495607_0023350 3300046501 Bacteria 3872
206 Ga0495607_0056959 3300046501 Bacteria 2242
207 Ga0495583_0004779 3300046506 Bacteria 9505
208 Ga0495583_0012987 3300046506 Bacteria 4676
209 Ga0495606_0012625 3300046507 Bacteria 6753
210 Ga0495606_0073759 3300046507 Bacteria 2140
211 Ga0495616_0002111 3300046513 Bacteria 13329
212 Ga0495616_0011992 3300046513 Bacteria 4934
213 Ga0495620_0002091 3300046515 Bacteria 11608
214 Ga0495620_0031123 3300046515 Bacteria 2448
215 Ga0495632_0008227 3300046519 Bacteria 6433
216 Ga0495632_0020734 3300046519 Bacteria 3553
217 Ga0495643_0000316 3300046522 Bacteria 66852
218 Ga0495643_0016409 3300046522 Bacteria 4349
219 Ga0495648_0072156 3300046524 Bacteria 1999
220 Ga0495663_0005361 3300046525 Bacteria 3563
221 Ga0495633_0000219 3300046558 Bacteria 70928
222 Ga0495633_0000488 3300046558 Bacteria 40116
223 Ga0495633_0001799 3300046558 Bacteria 15821
224 Ga0495633_0015324 3300046558 Bacteria 3978
225 Ga0495668_0002203 3300046616 Bacteria 16596
226 Ga0495611_0034015 3300046648 Bacteria 2251
227 Ga0495625_0000691 3300046660 Bacteria 48010
228 Ga0495625_0004120 3300046660 Bacteria 13873
229 Ga0495625_0004614 3300046660 Bacteria 12952
230 Ga0495625_0006496 3300046660 Bacteria 10388
231 Ga0495625_0009327 3300046660 Bacteria 8223
232 Ga0495625_0051504 3300046660 Bacteria 2951
233 Ga0495625_0288429 3300046660 Bacteria 1054
234 Ga0495649_0031628 3300046694 Bacteria 2917
235 Ga0495660_0070429 3300046810 Bacteria 1856
236 Ga0495674_0042594 3300047319 Bacteria 4048
237 Ga0495683_0012001 3300047323 Bacteria 4553
238 Ga0495687_000119 3300047443 Bacteria 121587
239 Ga0495687_002041 3300047443 Bacteria 17012
240 Ga0495687_008755 3300047443 Bacteria 5749
241 Ga0495673_0098642 3300047469 Bacteria 1184
242 Ga0495686_0000034 3300047472 Bacteria 325038
243 Ga0495686_0001041 3300047472 Bacteria 33277
244 Ga0495686_0032401 3300047472 Bacteria 3383
245 Ga0495686_0045347 3300047472 Bacteria 2782
246 Ga0495686_0048985 3300047472 Bacteria 2661
247 Ga0495686_0060612 3300047472 Bacteria 2352
248 Ga0495626_0038368 3300048091 Bacteria 2272
249 Ga0496100_0185559 3300048903 Bacteria 1507
250 Ga0496103_0057828 3300048906 Bacteria 2408
251 Ga0496113_0262015 3300048916 Bacteria 1381
252 Ga0496116_0000007 3300048919 Bacteria 795464
253 Ga0496117_0019167 3300048920 Bacteria 5629
254 Ga0496118_0019407 3300048921 Bacteria 6077
255 Ga0496119_0022554 3300048922 Bacteria 4501
256 Ga0496123_0038698 3300048926 Bacteria 3347
257 Ga0496124_0000800 3300048927 Bacteria 51160
258 Ga0496124_0032758 3300048927 Bacteria 4583
259 Ga0496124_0141123 3300048927 Unclassified 1901
260 Ga0496126_0034147 3300048929 Bacteria 4781
261 Ga0496126_0138940 3300048929 Bacteria 2093
262 Ga0495682_0076353 3300049460 Bacteria 1205
263 Ga0501300_003552 3300049523 Bacteria 2322
264 Ga0501207_015079 3300049654 Bacteria 1186
265 Ga0501249_000001 3300049679 Bacteria 268580
266 Ga0501241_000019 3300049758 Bacteria 88612
267 Ga0501241_001006 3300049758 Bacteria 5933
268 Ga0501269_000151 3300049766 Bacteria 21375
269 nmdc:mga03683_18616_c2 3300050489 Bacteria 1113
270 nmdc:mga0yw44_144760_c1 3300050492 Bacteria 1547
271 nmdc:mga0k408_155259_c1 3300050493 Bacteria 1363
272 nmdc:mga0k408_168_c2 3300050493 Bacteria 27329
273 nmdc:mga05p37_24695_c1 3300050507 Bacteria 7305
274 nmdc:mga05p37_3534_c2 3300050507 Bacteria 14748
275 nmdc:mga0sz30_9623_c1 3300050516 Bacteria 3684
276 Ga0500578_0000014 3300053086 Bacteria 185676
277 Ga0500578_0062243 3300053086 Bacteria 2382
278 Ga0500644_0000069 3300053088 Bacteria 61316
279 Ga0500644_0118091 3300053088 Bacteria 1030
280 Ga0500646_0004676 3300053090 Bacteria 3460
281 Ga0500646_0040455 3300053090 Bacteria 1311
282 Ga0500641_0000020 3300053096 Bacteria 119591
283 Ga0500641_0000181 3300053096 Bacteria 23739
284 Ga0500607_194996 3300053121 Unclassified 879
285 Ga0500618_007667 3300053125 Bacteria 3062
286 Ga0500642_0000363 3300053130 Bacteria 15269
287 Ga0500652_037607 3300053131 Bacteria 1932
288 Ga0500559_0182409 3300053136 Bacteria 989
289 Ga0500568_0003096 3300053139 Bacteria 9484
290 Ga0500616_0000051 3300053153 Bacteria 296240
291 Ga0500616_0015166 3300053153 Unclassified 4412
292 Ga0500616_0160851 3300053153 Bacteria 1030
293 Ga0500622_0001379 3300053156 Bacteria 19568
294 Ga0500624_000354 3300053157 Bacteria 14863
295 2513233248 2513020052 Bacteria 5120511
296 2522550859 2522125168 Bacteria 7376607
297 2585397180 2582581866 Bacteria 6859583
298 2585404899 2582581867 Bacteria 7184437
299 2588233370 2585428187 Bacteria 4629388
300 2600203766 2599185354 Bacteria 4398675
301 2600225254 2599185359 Bacteria 4772316
302 2644008457 2643221600 Bacteria 5530138
303 2644369744 2643221667 Bacteria 5627472
304 2644642845 2643221716 Bacteria 4986332
305 2775672849 2775506739 Bacteria 3855222
306 2819590868 2818991444 Bacteria 6968812
307 2819712265 2818991466 Bacteria 4748179
308 2838667907 2838661181 Bacteria 7385261
309 2841862779 2841859092 Bacteria 5436171
310 2842111493 2842110456 Bacteria 7656360
311 2842519703 2842515876 Bacteria 5436280
312 2842905683 2842903701 Bacteria 6986368
313 2881250529 2881247448 Bacteria 3717788
314 2919099267 2919097161 Bacteria 3860339
315 2919439093 2919437846 Bacteria 6199444
316 2919439569 2919437846 Bacteria 6199444
317 2923560217 2923556063 Bacteria 6793593
318 2928528369 2928526807 Bacteria 4760224
319 2928972522 2928968154 Bacteria 4633371
320 2929153184 2929150217 Bacteria 5462483
321 2929156721 2929154850 Bacteria 6753285
322 2929244535 2929239360 Bacteria 7745570
323 2933011999 2933011516 Bacteria 5439334
324 2933588047 2933586486 Bacteria 7667493
325 2945926336 2945924605 Bacteria 4296724
326 2954017697 2954016120 Bacteria 6446024
327 2958515825 2958512119 Bacteria 4528530
328 2965321703 2965320100 Bacteria 3975600
329 8054303371 8054302542 Bacteria 5698134
330 8054308148 8054307821 Bacteria 5212224
331 Ga0163162_10118367
332 MBSR1b_contig_12662825
333 LJNas_1001857
334 JGI25162J39368_1000055
335 JGI25162J39368_1000213
336 JGI25162J39368_1001865
337 JGI25164J39214_1000988
338 JGI25152J39213_1000119
339 JGI25152J39213_1007395
340 JGI25150J39212_1000015
341 JGI25150J39212_1003277
342 JGI25151J46595_10000043
343 JGI25165J46597_1001364
344 JGI25153J46596_10000009
345 JGI25153J46596_10051124
346 rootH1_10073219
347 rootH1_10150524
348 rootH2_10040125
349 rootH2_10053388
350 rootH2_10282988
351 rootL2_10016075
352 rootL2_10030140
353 rootL2_10052296
354 rootL2_10176022
355 rootH1_10017777
356 rootH1_10044499
357 rootH1_10114723
358 rootH1_10127028
359 Ga0055531_10000067
360 Ga0065165_1002384
361 Ga0065714_10008701
362 Ga0065714_10102113
363 Ga0065714_10142855
364 Ga0065704_10071985
365 Ga0065704_10195095
366 Ga0065715_10196759
367 Ga0070658_10000028
368 Ga0070676_10002483
369 Ga0070683_100030557
370 Ga0068869_100020964
371 Ga0068868_100280069
372 Ga0070668_100440011
373 Ga0070671_100016893
374 Ga0070674_100152268
375 Ga0070673_100004946
376 Ga0070678_100014256
377 Ga0070662_100089274
378 Ga0070662_100287479
379 Ga0068867_100000990
380 Ga0068853_100038601
381 Ga0068853_100095893
382 Ga0068853_100782245
383 Ga0068855_100027524
384 Ga0068854_100021048
385 Ga0068852_100001564
386 Ga0068852_100105764
387 Ga0068861_100591993
388 Ga0068870_10041753
389 Ga0068863_100497583
390 Ga0068860_100063710
391 Ga0075365_10094213
392 Ga0075362_10043071
393 Ga0075362_10102423
394 Ga0075367_10240798
395 Ga0075369_10041147
396 Ga0075366_10000656
397 Ga0097621_100001192
398 Ga0068871_100000088
399 Ga0068865_100001897
400 Ga0105251_10002137
401 Ga0105240_10000033
402 Ga0105240_10001336
403 Ga0105240_10001721
404 Ga0105240_10002159
405 Ga0105240_10652437
406 Ga0114129_10004516
407 Ga0105243_10222289
408 Ga0105241_10009258
409 Ga0105241_10115472
410 Ga0105242_10575371
411 Ga0105237_10000819
412 Ga0105237_10000948
413 Ga0105238_10171641
414 Ga0105239_10000327
415 Ga0105239_10006307
416 Ga0105239_10407842
417 Ga0105239_10720111
418 Ga0105246_10163625
419 Ga0105246_10251684
420 Ga0157373_10000063
421 Ga0157371_10000021
422 Ga0157371_10005458
423 Ga0157370_10000708
424 Ga0157370_10005342
425 Ga0157370_10007911
426 Ga0157370_10119635
427 Ga0157370_10127978
428 Ga0157374_10008877
429 Ga0157374_10235404
430 Ga0157378_10069328
431 Ga0157378_10161602
432 Ga0163162_10006492
433 Ga0157372_10002988
434 Ga0157372_10064024
435 Ga0157375_10043913
436 Ga0157375_10874765
437 Ga0157375_10886076
438 Ga0163163_10421128
439 Ga0157376_10044411
440 Ga0182006_1013142
441 Ga0163161_10001157
442 Ga0163161_10011227
443 Ga0213872_10019507
444 Ga0207427_100066
445 Ga0209437_100010
446 Ga0209437_100130
447 Ga0209437_100134
448 Ga0207425_1000023
449 Ga0207425_1003637
450 Ga0209026_1000453
451 Ga0209129_1000032
452 Ga0209233_1000017
453 Ga0209025_1000047
454 Ga0209025_1005143
455 Ga0209025_1046081
456 Ga0209758_1000144
457 Ga0209758_1000676
458 Ga0209758_1000818
459 Ga0209050_1029325
460 Ga0209257_1000004
461 Ga0209257_1000005
462 Ga0207713_1000022
463 Ga0207647_10006738
464 Ga0207645_10001268
465 Ga0207643_10135087
466 Ga0207705_10000045
467 Ga0207654_10098759
468 Ga0207695_10000023
469 Ga0207695_10004097
470 Ga0207671_10003807
471 Ga0207694_10256237
472 Ga0207706_10550404
473 Ga0207709_10225899
474 Ga0207704_10000192
475 Ga0207689_10018802
476 Ga0207661_10045483
477 Ga0207667_10019424
478 Ga0207651_10031900
479 Ga0207668_10166300
480 Ga0207640_10137528
481 Ga0207677_10202710
482 Ga0207639_10022674
483 Ga0207639_10040771
484 Ga0207641_10588753
485 Ga0207648_10000287
486 Ga0207648_10201899
487 Ga0207683_10019900
488 Ga0268264_10038869
489 Ga0307517_10002201
490 Ga0307515_10000001
491 Ga0307515_10000057
492 Ga0307515_10002588
493 Ga0307515_10079415
494 Ga0307511_10000294
495 Ga0265327_10000097
496 Ga0307513_10003577
497 Ga0307509_10027752
498 Ga0307408_100000608
499 Ga0307408_100000613
500 Ga0307408_100007497
501 Ga0307408_100010711
502 Ga0307516_10028541
503 Ga0307405_10000002
504 Ga0307405_10024318
505 Ga0307412_10000451
506 Ga0307412_10005356
507 Ga0307412_10092012
508 Ga0307412_10314878
509 Ga0307414_10006162
510 Ga0307414_10212432
511 Ga0307414_10352559
512 Ga0307510_10029715
513 Ga0307510_10033090
514 Ga0373941_0022036
515 Ga0395899_0003500
516 Ga0395900_0001762
517 Ga0395898_0008761
518 Ga0395905_0001720
519 Ga0395901_0005919
520 Ga0436361_0144116
521 Ga0451807_1663595
522 Ga0451843_0536839
523 Ga0451853_2360335
524 Ga0439457_009190
525 Ga0466972_0000015
526 Ga0466972_0000019
527 Ga0466968_0039137
528 Ga0466970_0072305
529 Ga0466957_0016154
530 Ga0495627_007233
531 Ga0495638_0000001
532 Ga0495585_0077029
533 Ga0495596_0015686
534 Ga0495607_0023350
535 Ga0495607_0056959
536 Ga0495583_0004779
537 Ga0495583_0012987
538 Ga0495606_0012625
539 Ga0495606_0073759
540 Ga0495616_0002111
541 Ga0495616_0011992
542 Ga0495620_0002091
543 Ga0495620_0031123
544 Ga0495632_0008227
545 Ga0495632_0020734
546 Ga0495643_0000316
547 Ga0495643_0016409
548 Ga0495648_0072156
549 Ga0495663_0005361
550 Ga0495633_0000219
551 Ga0495633_0000488
552 Ga0495633_0001799
553 Ga0495633_0015324
554 Ga0495668_0002203
555 Ga0495611_0034015
556 Ga0495625_0000691
557 Ga0495625_0004120
558 Ga0495625_0004614
559 Ga0495625_0006496
560 Ga0495625_0009327
561 Ga0495625_0051504
562 Ga0495625_0288429
563 Ga0495649_0031628
564 Ga0495660_0070429
565 Ga0495674_0042594
566 Ga0495683_0012001
567 Ga0495687_000119
568 Ga0495687_002041
569 Ga0495687_008755
570 Ga0495673_0098642
571 Ga0495686_0000034
572 Ga0495686_0001041
573 Ga0495686_0032401
574 Ga0495686_0045347
575 Ga0495686_0048985
576 Ga0495686_0060612
577 Ga0495626_0038368
578 Ga0496100_0185559
579 Ga0496103_0057828
580 Ga0496113_0262015
581 Ga0496116_0000007
582 Ga0496117_0019167
583 Ga0496118_0019407
584 Ga0496119_0022554
585 Ga0496123_0038698
586 Ga0496124_0000800
587 Ga0496124_0032758
588 Ga0496124_0141123
589 Ga0496126_0034147
590 Ga0496126_0138940
591 Ga0495682_0076353
592 Ga0501300_003552
593 Ga0501207_015079
594 Ga0501249_000001
595 Ga0501241_000019
596 Ga0501241_001006
597 Ga0501269_000151
598 nmdc:mga03683_18616_c2
599 nmdc:mga0yw44_144760_c1
600 nmdc:mga0k408_155259_c1
601 nmdc:mga0k408_168_c2
602 nmdc:mga05p37_24695_c1
603 nmdc:mga05p37_3534_c2
604 nmdc:mga0sz30_9623_c1
605 Ga0500578_0000014
606 Ga0500578_0062243
607 Ga0500644_0000069
608 Ga0500644_0118091
609 Ga0500646_0004676
610 Ga0500646_0040455
611 Ga0500641_0000020
612 Ga0500641_0000181
613 Ga0500607_194996
614 Ga0500618_007667
615 Ga0500642_0000363
616 Ga0500652_037607
617 Ga0500559_0182409
618 Ga0500568_0003096
619 Ga0500616_0000051
620 Ga0500616_0015166
621 Ga0500616_0160851
622 Ga0500622_0001379
623 Ga0500624_000354
624 2513233248
625 2522550859
626 2585397180
627 2585404899
628 2588233370
629 2600203766
630 2600225254
631 2644008457
632 2644369744
633 2644642845
634 2775672849
635 2819590868
636 2819712265
637 2838667907
638 2841862779
639 2842111493
640 2842519703
641 2842905683
642 2881250529
643 2919099267
644 2919439093
645 2919439569
646 2923560217
647 2928528369
648 2928972522
649 2929153184
650 2929156721
651 2929244535
652 2933011999
653 2933588047
654 2945926336
655 2954017697
656 2958515825
657 2965321703
658 8054303371
659 8054308148

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

50

241

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

56

262

0.94

PF08659

KR

KR domain

50

222

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3p19-assembly1.cif.gz_B improved nadph-dependent blue fluorescent protein 0.9515 2 240
7ulh-assembly1.cif.gz_B crystal structure of a short chain dehydrogenase from mycobacterium avium 104 0.9371 3 178
3qlj-assembly3.cif.gz_F crystal structure of a short chain dehydrogenase from mycobacterium avium 0.9336 3 180
7ulh-assembly1.cif.gz_C crystal structure of a short chain dehydrogenase from mycobacterium avium 104 0.9329 3 179
3m1a-assembly2.cif.gz_B the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9324 1 268
ID Description Score Start End Superfamily
af_Q54WA9_4_295_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9507 1 267 3.40.50.720
af_Q54G79_5_301_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9496 3 265 3.40.50.720
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9457 2 268 3.40.50.720
af_Q869L6_6_285_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9444 2 265 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9437 3 179 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3A6RLM2-F1-model_v4 deleted 0.9943 1 183
AF-A0A4Q6BSI7-F1-model_v4 SDR family oxidoreductase 0.9875 1 180 GO:0016491
AF-A0A2Z5G5B8-F1-model_v4 Oxidoreductase, short-chain dehydrogenase-reductase family 0.9859 1 268 GO:0016491
AF-A0A530M320-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9858 1 183 GO:0016491
AF-A0A7Y8VGN1-F1-model_v4 deleted 0.9842 3 177

Map