F410380

General Info

Members Datasets Scaffolds Average Seq Length
331 211 662 276

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10099547|Ga0070666_100995472
Length 320
Sequence MRSGTPVSGVTASQATDLLAAATGSHSGEVERFGHDRPLAMPEARSSLDAMRIATWNVNSVRSRVGRIVDWLGREEVDVLAMQEIKCTEAQFPMDEFGEAGYEVQLHGLNQWNGVAIASRYPMDDVQIGFDGMPGFLKGEEGPDLPLEARAIGATVNGVRVWSLYVPNGRALGDPHLDYKLDWLSALAAATRDWMAAHPDSPIALTGDFNIAPLDSDVGDPTFIPGVSTHISPPEREAFAALEAVGLTDVVRPLVPEGFTFWDYKQLRFPRNEGLRIDFVLGNHSFADRVVGAAIHRNERKGDAPSDHVPVVVDDRPMIF

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
165 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
174 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
181 2643221597 Microbacterium sp. Root180 Isolate Unclassified
182 2643221616 Leifsonia sp. Root227 Isolate Unclassified
183 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
184 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
185 2643221649 Leifsonia sp. Root4 Isolate Unclassified
186 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
187 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
188 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
189 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
190 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
191 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
192 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
193 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
194 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
195 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
196 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
197 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
198 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
199 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
200 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
201 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
202 2928153084 Leifsonia sp. 563 Isolate Unclassified
203 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
204 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
205 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
206 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
207 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
208 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
209 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
210 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
211 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.12
Metatranscriptomes 1.21
Isolates 9.67

Biome Distribution

Category Percentage (%)
Aerial Root 0.3
Bulb 0
Endosphere 15.71
Nodule 0
Rhizoplane 2.72
Rhizosphere 66.47
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10099547 3300005335 Bacteria 2002
2 JGI24740J21852_10027736 3300001979 Bacteria 1880
3 JGI24739J22299_10030063 3300001989 Bacteria 1884
4 JGI24735J21928_10000525 3300002067 Bacteria 13544
5 JGI25164J39214_1001317 3300002772 Bacteria 6239
6 JGI25165J46597_1000005 3300003214 Bacteria 623702
7 Ga0006562J51391_1024747 3300003578 Bacteria 3860
8 Ga0006562J51391_1024750 3300003578 Bacteria 3640
9 Ga0055539_1000069 3300003752 Bacteria 134064
10 Ga0055533_1000037 3300003756 Bacteria 255573
11 Ga0055532_1003552 3300003758 Bacteria 2626
12 Ga0055525_1000252 3300003759 Bacteria 52775
13 Ga0055527_1000025 3300003760 Bacteria 195817
14 Ga0055542_1000048 3300003762 Bacteria 195800
15 Ga0055529_1000057 3300003763 Bacteria 195807
16 Ga0065714_10019735 3300005288 Bacteria 2378
17 Ga0070658_10000129 3300005327 Bacteria 67266
18 Ga0070658_10006348 3300005327 Bacteria 9581
19 Ga0070658_10162178 3300005327 Bacteria 1876
20 Ga0070658_10236040 3300005327 Bacteria 1549
21 Ga0070682_100234806 3300005337 Bacteria 1313
22 Ga0068868_100061062 3300005338 Bacteria 2985
23 Ga0070668_100045869 3300005347 Bacteria 3354
24 Ga0070659_100046596 3300005366 Bacteria 3399
25 Ga0070667_100067573 3300005367 Bacteria 3039
26 Ga0070667_100150197 3300005367 Bacteria 2046
27 Ga0070710_10024448 3300005437 Bacteria 3187
28 Ga0070705_100245741 3300005440 Bacteria 1253
29 Ga0070700_100000184 3300005441 Bacteria 35554
30 Ga0070685_10016105 3300005466 Bacteria 3978
31 Ga0068855_100008064 3300005563 Bacteria 12727
32 Ga0068855_100186804 3300005563 Bacteria 2340
33 Ga0068857_100003702 3300005577 Bacteria 12827
34 Ga0068856_100247364 3300005614 Bacteria 1798
35 Ga0068852_100020503 3300005616 Bacteria 5258
36 Ga0068859_100143810 3300005617 Bacteria 2459
37 Ga0068864_100187554 3300005618 Bacteria 1894
38 Ga0068861_100059800 3300005719 Bacteria 2919
39 Ga0068861_100678728 3300005719 Bacteria 955
40 Ga0068851_10000030 3300005834 Bacteria 114502
41 Ga0068870_10015323 3300005840 Bacteria 3635
42 Ga0068863_100116670 3300005841 Bacteria 2544
43 Ga0068858_100000519 3300005842 Bacteria 40469
44 Ga0068862_100144674 3300005844 Bacteria 2112
45 Ga0075365_10005438 3300006038 Bacteria 6867
46 Ga0075365_10083160 3300006038 Bacteria 2171
47 Ga0075364_10015546 3300006051 Bacteria 4721
48 Ga0070716_100064219 3300006173 Bacteria 2134
49 Ga0075369_10006704 3300006186 Bacteria 4365
50 Ga0097620_100143815 3300006931 Bacteria 2459
51 Ga0105244_10042564 3300009036 Bacteria 2347
52 Ga0105240_10004010 3300009093 Bacteria 22684
53 Ga0105240_10161419 3300009093 Bacteria 2662
54 Ga0105240_10441343 3300009093 Bacteria 1458
55 Ga0105245_10122551 3300009098 Bacteria 2430
56 Ga0105245_10190215 3300009098 Bacteria 1965
57 Ga0105243_10076511 3300009148 Bacteria 2719
58 Ga0105241_10002089 3300009174 Bacteria 15087
59 Ga0105248_10000905 3300009177 Bacteria 33139
60 Ga0105248_10013127 3300009177 Bacteria 9123
61 Ga0105237_10000724 3300009545 Bacteria 45653
62 Ga0105237_10313126 3300009545 Bacteria 1573
63 Ga0105238_10016731 3300009551 Bacteria 7432
64 Ga0105238_10107168 3300009551 Bacteria 2775
65 Ga0105238_10431121 3300009551 Bacteria 1314
66 Ga0105239_10113202 3300010375 Bacteria 3009
67 Ga0105246_10103666 3300011119 Bacteria 2076
68 Ga0157371_10002269 3300013102 Bacteria 18540
69 Ga0157370_10039768 3300013104 Bacteria 4543
70 Ga0157369_10000554 3300013105 Bacteria 49088
71 Ga0157369_10039014 3300013105 Bacteria 5191
72 Ga0157369_10175504 3300013105 Bacteria 2256
73 Ga0157369_10246243 3300013105 Bacteria 1866
74 Ga0157369_10808783 3300013105 Bacteria 963
75 Ga0157374_10142462 3300013296 Bacteria 2327
76 Ga0157372_10058874 3300013307 Bacteria 4295
77 Ga0157372_10268787 3300013307 Bacteria 1981
78 Ga0163163_10071759 3300014325 Bacteria 3451
79 Ga0157380_10044507 3300014326 Bacteria 3480
80 Ga0157380_10261244 3300014326 Bacteria 1573
81 Ga0206356_10306660 3300020070 Bacteria 2236
82 Ga0206353_11516161 3300020082 Bacteria 20047
83 Ga0209674_100001 3300025226 Bacteria 4013750
84 Ga0209672_100011 3300025228 Bacteria 856297
85 Ga0209147_101795 3300025229 Bacteria 6728
86 Ga0209563_100001 3300025230 Bacteria 4013775
87 Ga0209563_100211 3300025230 Bacteria 30663
88 Ga0207427_100028 3300025231 Bacteria 388949
89 Ga0209437_101575 3300025233 Bacteria 5291
90 Ga0209258_104891 3300025242 Bacteria 2402
91 Ga0209677_100001 3300025253 Bacteria 4013787
92 Ga0209677_100731 3300025253 Bacteria 16734
93 Ga0209148_1000023 3300025254 Bacteria 680511
94 Ga0209233_1000001 3300025261 Bacteria 2992747
95 Ga0209455_1000023 3300025272 Bacteria 680449
96 Ga0207656_10000001 3300025321 Bacteria 1323684
97 Ga0207655_1086070 3300025728 Bacteria 1119
98 Ga0207692_10012145 3300025898 Bacteria 3691
99 Ga0207643_10033880 3300025908 Bacteria 2858
100 Ga0207705_10000001 3300025909 Bacteria 2061880
101 Ga0207705_10024526 3300025909 Bacteria 4303
102 Ga0207705_10038001 3300025909 Bacteria 3446
103 Ga0207654_10000001 3300025911 Bacteria 1816198
104 Ga0207695_10001789 3300025913 Bacteria 33914
105 Ga0207695_10010993 3300025913 Bacteria 10997
106 Ga0207671_10000001 3300025914 Bacteria 1318881
107 Ga0207671_10252701 3300025914 Bacteria 1386
108 Ga0207657_10001206 3300025919 Bacteria 27523
109 Ga0207694_10001525 3300025924 Bacteria 19735
110 Ga0207690_10029666 3300025932 Bacteria 3481
111 Ga0207709_10167453 3300025935 Bacteria 1539
112 Ga0207711_10033098 3300025941 Bacteria 4372
113 Ga0207711_10038077 3300025941 Bacteria 4089
114 Ga0207711_10583395 3300025941 Bacteria 1043
115 Ga0207667_10000732 3300025949 Bacteria 42642
116 Ga0207667_10005506 3300025949 Bacteria 15439
117 Ga0207667_10116337 3300025949 Bacteria 2755
118 Ga0207667_10233322 3300025949 Bacteria 1884
119 Ga0207658_10071803 3300025986 Bacteria 2622
120 Ga0207658_10090106 3300025986 Bacteria 2376
121 Ga0207677_10031275 3300026023 Bacteria 3408
122 Ga0207703_10002134 3300026035 Bacteria 17404
123 Ga0207708_10000023 3300026075 Bacteria 176615
124 Ga0207702_10151625 3300026078 Bacteria 2109
125 Ga0207641_10135159 3300026088 Bacteria 2219
126 Ga0207676_10170821 3300026095 Bacteria 1894
127 Ga0207674_10010123 3300026116 Bacteria 10721
128 Ga0207675_100009641 3300026118 Bacteria 9037
129 Ga0207698_10000112 3300026142 Bacteria 50642
130 Ga0268265_10149461 3300028380 Bacteria 1968
131 Ga0307515_10049865 3300028794 Bacteria 6283
132 Ga0307515_10220198 3300028794 Bacteria 1718
133 Ga0307513_10093989 3300031456 Bacteria 3045
134 Ga0307514_10006647 3300031649 Bacteria 10030
135 Ga0307514_10012773 3300031649 Bacteria 6980
136 Ga0307405_10400988 3300031731 Bacteria 1074
137 Ga0395899_0024544 3300037312 Bacteria 4557
138 Ga0395899_0027493 3300037312 Bacteria 4288
139 Ga0395900_0002808 3300037418 Bacteria 19018
140 Ga0395900_0171906 3300037418 Bacteria 2205
141 Ga0395900_0274581 3300037418 Bacteria 1679
142 Ga0395898_0000838 3300037466 Bacteria 50932
143 Ga0395901_0081442 3300038443 Bacteria 3381
144 Ga0439465_0039130 3300041413 Bacteria 1530
145 Ga0451806_877629 3300041462 Bacteria 1383
146 Ga0466972_0021240 3300044658 Bacteria 3239
147 Ga0466972_0138321 3300044658 Bacteria 1146
148 Ga0466965_0000004 3300044683 Bacteria 229348
149 Ga0466965_0029366 3300044683 Bacteria 2676
150 Ga0466965_0090228 3300044683 Bacteria 1558
151 Ga0466961_0107542 3300044693 Bacteria 1756
152 Ga0466971_0034679 3300044719 Bacteria 2262
153 Ga0466968_0046902 3300044735 Bacteria 1836
154 Ga0466970_0002745 3300044765 Bacteria 8501
155 Ga0466970_0010174 3300044765 Bacteria 4768
156 Ga0466970_0016356 3300044765 Bacteria 3822
157 Ga0466970_0035582 3300044765 Bacteria 2637
158 Ga0466970_0106624 3300044765 Bacteria 1528
159 Ga0466970_0131803 3300044765 Bacteria 1373
160 Ga0466970_0141207 3300044765 Bacteria 1327
161 Ga0466957_0016417 3300044842 Bacteria 4332
162 Ga0466960_0013273 3300044901 Bacteria 3496
163 Ga0466959_0013249 3300045049 Bacteria 5971
164 Ga0466958_0164396 3300045836 Bacteria 1404
165 Ga0466967_0595157 3300045976 Bacteria 1091
166 Ga0495590_0000115 3300046457 Bacteria 48176
167 Ga0495650_0000897 3300046471 Bacteria 35099
168 Ga0495656_0057059 3300046615 Bacteria 1689
169 Ga0495672_0163119 3300047320 Bacteria 1143
170 Ga0496101_0138212 3300048904 Bacteria 1855
171 Ga0496102_0143719 3300048905 Bacteria 2238
172 Ga0496102_0190343 3300048905 Bacteria 1933
173 Ga0496102_0353541 3300048905 Bacteria 1383
174 Ga0496104_0099423 3300048907 Bacteria 2785
175 Ga0496106_0328301 3300048909 Bacteria 1228
176 Ga0496114_0095290 3300048917 Bacteria 2532
177 Ga0496115_0012578 3300048918 Bacteria 6376
178 Ga0496117_0000174 3300048920 Bacteria 132648
179 Ga0496117_0001641 3300048920 Bacteria 31427
180 Ga0496117_0021496 3300048920 Bacteria 5217
181 Ga0496117_0080024 3300048920 Bacteria 2150
182 Ga0496117_0089186 3300048920 Bacteria 1992
183 Ga0496117_0204189 3300048920 Bacteria 1114
184 Ga0496118_0000201 3300048921 Bacteria 104874
185 Ga0496118_0005206 3300048921 Bacteria 14875
186 Ga0496118_0037821 3300048921 Bacteria 3878
187 Ga0496118_0116490 3300048921 Bacteria 1756
188 Ga0496119_0001450 3300048922 Bacteria 28538
189 Ga0496119_0002317 3300048922 Bacteria 21003
190 Ga0496119_0039935 3300048922 Bacteria 3010
191 Ga0496119_0046624 3300048922 Bacteria 2704
192 Ga0496120_0002621 3300048923 Bacteria 17821
193 Ga0496120_0009633 3300048923 Bacteria 6824
194 Ga0496120_0025017 3300048923 Bacteria 3713
195 Ga0496120_0028372 3300048923 Bacteria 3431
196 Ga0496121_0040755 3300048924 Bacteria 4069
197 Ga0496122_0004477 3300048925 Bacteria 17284
198 Ga0496122_0030333 3300048925 Bacteria 4533
199 Ga0496122_0161129 3300048925 Bacteria 1368
200 Ga0496122_0234269 3300048925 Bacteria 1041
201 Ga0496123_0005696 3300048926 Bacteria 12420
202 Ga0496123_0063189 3300048926 Bacteria 2368
203 Ga0496124_0000194 3300048927 Bacteria 120672
204 Ga0496124_0007243 3300048927 Bacteria 11841
205 Ga0496126_0031611 3300048929 Bacteria 4997
206 Ga0496126_0127743 3300048929 Bacteria 2199
207 Ga0496126_0314042 3300048929 Bacteria 1290
208 Ga0501032_0010530 3300049569 Bacteria 6669
209 Ga0501032_0014200 3300049569 Bacteria 5642
210 Ga0501032_0140327 3300049569 Bacteria 1591
211 Ga0501033_0018658 3300049570 Bacteria 5242
212 Ga0501033_0137687 3300049570 Bacteria 1766
213 Ga0501033_0409385 3300049570 Bacteria 945
214 Ga0501034_0023140 3300049571 Bacteria 6332
215 Ga0501034_0056496 3300049571 Bacteria 3949
216 Ga0501034_0057813 3300049571 Bacteria 3898
217 Ga0501034_0137426 3300049571 Bacteria 2424
218 Ga0501034_0291432 3300049571 Bacteria 1570
219 Ga0501034_0394501 3300049571 Bacteria 1307
220 Ga0501036_0066551 3300049572 Bacteria 3048
221 Ga0501037_0020665 3300049573 Bacteria 4861
222 Ga0501037_0024996 3300049573 Bacteria 4414
223 Ga0501037_0026687 3300049573 Bacteria 4268
224 Ga0501037_0074773 3300049573 Bacteria 2461
225 Ga0501037_0099211 3300049573 Bacteria 2104
226 Ga0501037_0223510 3300049573 Bacteria 1324
227 Ga0501038_0003745 3300049574 Bacteria 14160
228 Ga0501038_0018400 3300049574 Bacteria 6306
229 Ga0501038_0047428 3300049574 Bacteria 3721
230 Ga0501038_0061392 3300049574 Bacteria 3214
231 Ga0501038_0150393 3300049574 Bacteria 1898
232 Ga0501039_0005281 3300049575 Bacteria 9771
233 Ga0501039_0155239 3300049575 Bacteria 1798
234 Ga0501039_0214479 3300049575 Bacteria 1514
235 Ga0501043_0013505 3300049579 Bacteria 6389
236 Ga0501046_0000344 3300049580 Bacteria 46739
237 Ga0501046_0147432 3300049580 Bacteria 1776
238 Ga0501047_0000714 3300049581 Bacteria 34622
239 Ga0501047_0002185 3300049581 Bacteria 18724
240 Ga0501047_0040299 3300049581 Bacteria 4517
241 Ga0501047_0050134 3300049581 Bacteria 4031
242 Ga0501047_0172769 3300049581 Bacteria 2029
243 Ga0501048_0027466 3300049582 Bacteria 4135
244 Ga0501048_0095413 3300049582 Bacteria 2097
245 Ga0501067_0289124 3300049583 Bacteria 913
246 Ga0501068_0028987 3300049584 Bacteria 3277
247 Ga0501068_0065595 3300049584 Bacteria 2210
248 Ga0501069_0010852 3300049585 Bacteria 4828
249 Ga0501069_0196703 3300049585 Bacteria 1167
250 Ga0501070_0002465 3300049586 Bacteria 16207
251 Ga0501070_0017767 3300049586 Bacteria 5972
252 Ga0501070_0231129 3300049586 Bacteria 1515
253 Ga0501071_0000231 3300049587 Bacteria 25508
254 Ga0501072_0133495 3300049588 Bacteria 1979
255 Ga0501073_0000046 3300049589 Bacteria 78180
256 Ga0501073_0012557 3300049589 Bacteria 6182
257 Ga0501073_0111953 3300049589 Bacteria 1893
258 Ga0501074_0024652 3300049590 Bacteria 4370
259 Ga0501074_0040793 3300049590 Bacteria 3361
260 Ga0501083_0007399 3300049744 Bacteria 7788
261 Ga0501035_0014778 3300049822 Bacteria 7209
262 Ga0501035_0017759 3300049822 Bacteria 6562
263 Ga0501035_0026933 3300049822 Bacteria 5256
264 Ga0501035_0072728 3300049822 Bacteria 3042
265 Ga0501044_0011435 3300049823 Bacteria 9615
266 Ga0501044_0011728 3300049823 Bacteria 9493
267 Ga0501044_0019499 3300049823 Bacteria 7252
268 Ga0501044_0050352 3300049823 Bacteria 4298
269 Ga0501045_0006317 3300049824 Bacteria 8196
270 Ga0501045_0295466 3300049824 Bacteria 1205
271 nmdc:mga00v17_27249_c1 3300050491 Bacteria 3335
272 nmdc:mga0yw44_378311_c1 3300050492 Bacteria 956
273 nmdc:mga0yw44_41347_c1 3300050492 Bacteria 2744
274 nmdc:mga0yw44_99640_c1 3300050492 Bacteria 1849
275 nmdc:mga05p37_350116_c1 3300050507 Bacteria 1739
276 nmdc:mga0sz30_43891_c1 3300050516 Bacteria 1883
277 nmdc:mga0sz30_59374_c1 3300050516 Bacteria 1632
278 Ga0500635_0000138 3300053080 Bacteria 41788
279 Ga0500651_0000264 3300053093 Bacteria 31212
280 Ga0500556_0001137 3300053104 Bacteria 13017
281 Ga0500562_000646 3300053108 Bacteria 8425
282 Ga0500593_000381 3300053117 Bacteria 17618
283 Ga0500559_0000474 3300053136 Bacteria 28589
284 Ga0500568_0000051 3300053139 Bacteria 112462
285 Ga0500568_0002585 3300053139 Bacteria 10527
286 Ga0500568_0003104 3300053139 Bacteria 9471
287 Ga0500568_0009230 3300053139 Bacteria 4701
288 Ga0500573_0000437 3300053140 Bacteria 17885
289 Ga0500573_0003292 3300053140 Bacteria 8333
290 Ga0500573_0029609 3300053140 Bacteria 3155
291 Ga0500573_0049240 3300053140 Bacteria 2425
292 Ga0500588_0042301 3300053146 Bacteria 1379
293 Ga0500590_013138 3300053148 Bacteria 4243
294 Ga0500616_0000010 3300053153 Bacteria 761410
295 Ga0500616_0005840 3300053153 Bacteria 8245
296 Ga0500620_000054 3300053155 Bacteria 21041
297 Ga0500645_034190 3300053730 Bacteria 1518
298 Ga0501084_0104543 3300054114 Bacteria 2378
299 Ga0501082_0091238 3300060353 Bacteria 2631
300 2587861707 2585428094 Bacteria 3604039
301 2643997166 2643221597 Bacteria 3347721
302 2644097797 2643221616 Bacteria 4066575
303 2644182046 2643221632 Bacteria 3406696
304 2644197495 2643221635 Bacteria 2632343
305 2644278285 2643221649 Bacteria 3867359
306 2753300698 2751185788 Bacteria 4541048
307 2844843773 2844841374 Bacteria 3917147
308 2844853510 2844852863 Bacteria 3849151
309 2852678010 2852677369 Bacteria 3768884
310 2857733105 2857729791 Bacteria 4040535
311 2870625454 2870622029 Bacteria 3643329
312 2884766935 2884763398 Bacteria 4091164
313 2904431378 2904430863 Bacteria 3486923
314 2904502535 2904501621 Bacteria 3401437
315 2908678004 2908674828 Bacteria 3382763
316 2919041321 2919039151 Bacteria 3391018
317 2919044041 2919042368 Bacteria 3905917
318 2919055755 2919055335 Bacteria 3875751
319 2919525847 2919523602 Bacteria 3788128
320 2928107085 2928104781 Bacteria 3877447
321 2928121810 2928121344 Bacteria 3972376
322 2928153899 2928153084 Bacteria 4020257
323 2928501766 2928500415 Bacteria 3384541
324 2939661549 2939660829 Bacteria 3784848
325 2966926987 2966924647 Bacteria 3268643
326 2984552775 2984551494 Bacteria 3877562
327 2995729112 2995726249 Bacteria 3470435
328 8055034620 8055034563 Bacteria 3562128
329 8055040360 8055037949 Bacteria 3337834
330 8056040313 8056037122 Bacteria 3854319
331 8057346477 8057345674 Bacteria 4160394
332 Ga0070666_10099547
333 JGI24740J21852_10027736
334 JGI24739J22299_10030063
335 JGI24735J21928_10000525
336 JGI25164J39214_1001317
337 JGI25165J46597_1000005
338 Ga0006562J51391_1024747
339 Ga0006562J51391_1024750
340 Ga0055539_1000069
341 Ga0055533_1000037
342 Ga0055532_1003552
343 Ga0055525_1000252
344 Ga0055527_1000025
345 Ga0055542_1000048
346 Ga0055529_1000057
347 Ga0065714_10019735
348 Ga0070658_10000129
349 Ga0070658_10006348
350 Ga0070658_10162178
351 Ga0070658_10236040
352 Ga0070682_100234806
353 Ga0068868_100061062
354 Ga0070668_100045869
355 Ga0070659_100046596
356 Ga0070667_100067573
357 Ga0070667_100150197
358 Ga0070710_10024448
359 Ga0070705_100245741
360 Ga0070700_100000184
361 Ga0070685_10016105
362 Ga0068855_100008064
363 Ga0068855_100186804
364 Ga0068857_100003702
365 Ga0068856_100247364
366 Ga0068852_100020503
367 Ga0068859_100143810
368 Ga0068864_100187554
369 Ga0068861_100059800
370 Ga0068861_100678728
371 Ga0068851_10000030
372 Ga0068870_10015323
373 Ga0068863_100116670
374 Ga0068858_100000519
375 Ga0068862_100144674
376 Ga0075365_10005438
377 Ga0075365_10083160
378 Ga0075364_10015546
379 Ga0070716_100064219
380 Ga0075369_10006704
381 Ga0097620_100143815
382 Ga0105244_10042564
383 Ga0105240_10004010
384 Ga0105240_10161419
385 Ga0105240_10441343
386 Ga0105245_10122551
387 Ga0105245_10190215
388 Ga0105243_10076511
389 Ga0105241_10002089
390 Ga0105248_10000905
391 Ga0105248_10013127
392 Ga0105237_10000724
393 Ga0105237_10313126
394 Ga0105238_10016731
395 Ga0105238_10107168
396 Ga0105238_10431121
397 Ga0105239_10113202
398 Ga0105246_10103666
399 Ga0157371_10002269
400 Ga0157370_10039768
401 Ga0157369_10000554
402 Ga0157369_10039014
403 Ga0157369_10175504
404 Ga0157369_10246243
405 Ga0157369_10808783
406 Ga0157374_10142462
407 Ga0157372_10058874
408 Ga0157372_10268787
409 Ga0163163_10071759
410 Ga0157380_10044507
411 Ga0157380_10261244
412 Ga0206356_10306660
413 Ga0206353_11516161
414 Ga0209674_100001
415 Ga0209672_100011
416 Ga0209147_101795
417 Ga0209563_100001
418 Ga0209563_100211
419 Ga0207427_100028
420 Ga0209437_101575
421 Ga0209258_104891
422 Ga0209677_100001
423 Ga0209677_100731
424 Ga0209148_1000023
425 Ga0209233_1000001
426 Ga0209455_1000023
427 Ga0207656_10000001
428 Ga0207655_1086070
429 Ga0207692_10012145
430 Ga0207643_10033880
431 Ga0207705_10000001
432 Ga0207705_10024526
433 Ga0207705_10038001
434 Ga0207654_10000001
435 Ga0207695_10001789
436 Ga0207695_10010993
437 Ga0207671_10000001
438 Ga0207671_10252701
439 Ga0207657_10001206
440 Ga0207694_10001525
441 Ga0207690_10029666
442 Ga0207709_10167453
443 Ga0207711_10033098
444 Ga0207711_10038077
445 Ga0207711_10583395
446 Ga0207667_10000732
447 Ga0207667_10005506
448 Ga0207667_10116337
449 Ga0207667_10233322
450 Ga0207658_10071803
451 Ga0207658_10090106
452 Ga0207677_10031275
453 Ga0207703_10002134
454 Ga0207708_10000023
455 Ga0207702_10151625
456 Ga0207641_10135159
457 Ga0207676_10170821
458 Ga0207674_10010123
459 Ga0207675_100009641
460 Ga0207698_10000112
461 Ga0268265_10149461
462 Ga0307515_10049865
463 Ga0307515_10220198
464 Ga0307513_10093989
465 Ga0307514_10006647
466 Ga0307514_10012773
467 Ga0307405_10400988
468 Ga0395899_0024544
469 Ga0395899_0027493
470 Ga0395900_0002808
471 Ga0395900_0171906
472 Ga0395900_0274581
473 Ga0395898_0000838
474 Ga0395901_0081442
475 Ga0439465_0039130
476 Ga0451806_877629
477 Ga0466972_0021240
478 Ga0466972_0138321
479 Ga0466965_0000004
480 Ga0466965_0029366
481 Ga0466965_0090228
482 Ga0466961_0107542
483 Ga0466971_0034679
484 Ga0466968_0046902
485 Ga0466970_0002745
486 Ga0466970_0010174
487 Ga0466970_0016356
488 Ga0466970_0035582
489 Ga0466970_0106624
490 Ga0466970_0131803
491 Ga0466970_0141207
492 Ga0466957_0016417
493 Ga0466960_0013273
494 Ga0466959_0013249
495 Ga0466958_0164396
496 Ga0466967_0595157
497 Ga0495590_0000115
498 Ga0495650_0000897
499 Ga0495656_0057059
500 Ga0495672_0163119
501 Ga0496101_0138212
502 Ga0496102_0143719
503 Ga0496102_0190343
504 Ga0496102_0353541
505 Ga0496104_0099423
506 Ga0496106_0328301
507 Ga0496114_0095290
508 Ga0496115_0012578
509 Ga0496117_0000174
510 Ga0496117_0001641
511 Ga0496117_0021496
512 Ga0496117_0080024
513 Ga0496117_0089186
514 Ga0496117_0204189
515 Ga0496118_0000201
516 Ga0496118_0005206
517 Ga0496118_0037821
518 Ga0496118_0116490
519 Ga0496119_0001450
520 Ga0496119_0002317
521 Ga0496119_0039935
522 Ga0496119_0046624
523 Ga0496120_0002621
524 Ga0496120_0009633
525 Ga0496120_0025017
526 Ga0496120_0028372
527 Ga0496121_0040755
528 Ga0496122_0004477
529 Ga0496122_0030333
530 Ga0496122_0161129
531 Ga0496122_0234269
532 Ga0496123_0005696
533 Ga0496123_0063189
534 Ga0496124_0000194
535 Ga0496124_0007243
536 Ga0496126_0031611
537 Ga0496126_0127743
538 Ga0496126_0314042
539 Ga0501032_0010530
540 Ga0501032_0014200
541 Ga0501032_0140327
542 Ga0501033_0018658
543 Ga0501033_0137687
544 Ga0501033_0409385
545 Ga0501034_0023140
546 Ga0501034_0056496
547 Ga0501034_0057813
548 Ga0501034_0137426
549 Ga0501034_0291432
550 Ga0501034_0394501
551 Ga0501036_0066551
552 Ga0501037_0020665
553 Ga0501037_0024996
554 Ga0501037_0026687
555 Ga0501037_0074773
556 Ga0501037_0099211
557 Ga0501037_0223510
558 Ga0501038_0003745
559 Ga0501038_0018400
560 Ga0501038_0047428
561 Ga0501038_0061392
562 Ga0501038_0150393
563 Ga0501039_0005281
564 Ga0501039_0155239
565 Ga0501039_0214479
566 Ga0501043_0013505
567 Ga0501046_0000344
568 Ga0501046_0147432
569 Ga0501047_0000714
570 Ga0501047_0002185
571 Ga0501047_0040299
572 Ga0501047_0050134
573 Ga0501047_0172769
574 Ga0501048_0027466
575 Ga0501048_0095413
576 Ga0501067_0289124
577 Ga0501068_0028987
578 Ga0501068_0065595
579 Ga0501069_0010852
580 Ga0501069_0196703
581 Ga0501070_0002465
582 Ga0501070_0017767
583 Ga0501070_0231129
584 Ga0501071_0000231
585 Ga0501072_0133495
586 Ga0501073_0000046
587 Ga0501073_0012557
588 Ga0501073_0111953
589 Ga0501074_0024652
590 Ga0501074_0040793
591 Ga0501083_0007399
592 Ga0501035_0014778
593 Ga0501035_0017759
594 Ga0501035_0026933
595 Ga0501035_0072728
596 Ga0501044_0011435
597 Ga0501044_0011728
598 Ga0501044_0019499
599 Ga0501044_0050352
600 Ga0501045_0006317
601 Ga0501045_0295466
602 nmdc:mga00v17_27249_c1
603 nmdc:mga0yw44_378311_c1
604 nmdc:mga0yw44_41347_c1
605 nmdc:mga0yw44_99640_c1
606 nmdc:mga05p37_350116_c1
607 nmdc:mga0sz30_43891_c1
608 nmdc:mga0sz30_59374_c1
609 Ga0500635_0000138
610 Ga0500651_0000264
611 Ga0500556_0001137
612 Ga0500562_000646
613 Ga0500593_000381
614 Ga0500559_0000474
615 Ga0500568_0000051
616 Ga0500568_0002585
617 Ga0500568_0003104
618 Ga0500568_0009230
619 Ga0500573_0000437
620 Ga0500573_0003292
621 Ga0500573_0029609
622 Ga0500573_0049240
623 Ga0500588_0042301
624 Ga0500590_013138
625 Ga0500616_0000010
626 Ga0500616_0005840
627 Ga0500620_000054
628 Ga0500645_034190
629 Ga0501084_0104543
630 Ga0501082_0091238
631 2587861707
632 2643997166
633 2644097797
634 2644182046
635 2644197495
636 2644278285
637 2753300698
638 2844843773
639 2844853510
640 2852678010
641 2857733105
642 2870625454
643 2884766935
644 2904431378
645 2904502535
646 2908678004
647 2919041321
648 2919044041
649 2919055755
650 2919525847
651 2928107085
652 2928121810
653 2928153899
654 2928501766
655 2939661549
656 2966926987
657 2984552775
658 2995729112
659 8055034620
660 8055040360
661 8056040313
662 8057346477

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03372

Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

54

308

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.9434 1 265
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9434 1 266
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9363 1 266
2voa-assembly1.cif.gz_B structure of an ap endonuclease from archaeoglobus fulgidus 0.9305 1 265
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.9292 1 265
ID Description Score Start End Superfamily
af_P96273_24_289_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9589 1 265 3.60.10.10
af_P96273_24_289_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9518 1 265 3.60.10.10
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9431 1 265 3.60.10.10
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9289 1 265 3.60.10.10
2voaB00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9213 1 265 3.60.10.10
ID Description Score Start End GO Terms
AF-A0A2W6TZN2-F1-model_v4 Exodeoxyribonuclease III 0.9986 1 148 GO:0006281
GO:0008311
GO:0046872
AF-A0A2W6TZN2-F1-model_v4 Exodeoxyribonuclease III 0.9919 1 148 GO:0006281
GO:0008311
GO:0046872
AF-A0A6J6JIZ0-F1-model_v4 Unannotated protein 0.9795 1 265 GO:0003677
GO:0004519
GO:0006281
GO:0008311
AF-A0A7W0H9B4-F1-model_v4 Endonuclease/exonuclease/phosphatase family protein 0.9769 1 165 GO:0004519
GO:0006281
GO:0008311
GO:0046872
AF-A0A6J6JIZ0-F1-model_v4 Unannotated protein 0.9757 1 265 GO:0003677
GO:0004519
GO:0006281
GO:0008311

Map