F412004

General Info

Members Datasets Scaffolds Average Seq Length
334 264 173 202

Family's Representative Sequence

Representative Sequence 3300053177|Ga0500636_0000021|Ga0500636_0000021_92630_93346
Length 238
Sequence MQESKLFLTQPAHFSTPSFRVIWFPGVSSKGDTGMDMMTLIAFAATFFFFAASPGPDNMTIVARTITHGAASGLAYGAGTVAGILIFLTLAAFGLSILAAEMGTLMTILRYAGAAYLIWMGVKLWTAEPIVPEMQTVKARGNLLSIFATGMALNLGNPKMPLFYVALLPNVVGESLTVDHLAALASVILAVEAVVIGGHVALAVRARTLLRSDKIVRRVNRTAGGVMIGSGVAVAVSR

Samples

Sample ID Description Type Environment
1 2509276018 Mesorhizobium ciceri CMG6 Isolate Nodule
2 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
3 2512875024 Mesorhizobium loti R88b Isolate Nodule
4 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
5 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
6 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
7 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
8 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
9 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
10 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
11 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
12 2643221558 Rhizobium sp. Root149 Isolate Unclassified
13 2643221568 Rhizobium sp. Root564 Isolate Unclassified
14 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
15 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
16 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
17 2643221693 Rhizobium sp. Root491 Isolate Unclassified
18 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
19 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
20 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
21 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
22 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
23 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
24 2818991467 Bosea vestrisii 3192 Isolate Unclassified
25 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
26 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
27 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
28 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
29 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
30 2856328259 Mesorhizobium sp. Primo-B Isolate Nodule
31 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
32 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
33 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
34 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
35 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
36 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
37 2869249662 Mesorhizobium sp. M7A.F.Ca.CA.001.16.1.1 Isolate Nodule
38 2869264136 Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 Isolate Nodule
39 2869271264 Mesorhizobium sp. M7A.F.Ca.AU.002.06.1.1 Isolate Nodule
40 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
41 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
42 2871459585 Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 Isolate Nodule
43 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
44 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
45 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
46 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
47 2874162495 Mesorhizobium sp. M7A.F.Ca.CA.002.11.2.1 Isolate Nodule
48 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
49 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
50 2876399893 Mesorhizobium sp. M7A.F.Ca.AU.002.03.1.1 Isolate Nodule
51 2876406927 Mesorhizobium sp. M7A.F.Ca.CA.002.03.2.1 Isolate Nodule
52 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
53 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
54 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
55 2878774303 Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 Isolate Nodule
56 2878781027 Mesorhizobium sp. M7A.F.Ca.CA.001.12.2.1 Isolate Nodule
57 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
58 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
59 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
60 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
61 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
62 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
63 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
64 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
65 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
66 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
67 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
68 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
69 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
70 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
71 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
72 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
73 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
74 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
75 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
76 2906363423 Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 Isolate Nodule
77 2906370794 Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 Isolate Nodule
78 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
79 2906386501 Mesorhizobium sp. M7A.F.Ca.CA.003.01.2.1 Isolate Nodule
80 2906393657 Mesorhizobium sp. M7A.F.Ca.CA.001.11.2.1 Isolate Nodule
81 2906408224 Mesorhizobium sp. M7A.F.Ca.CA.002.03.1.1 Isolate Nodule
82 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
83 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
84 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
85 2922151315 Mesorhizobium sp. M7A.F.Ca.US.007.01.2.1 Isolate Nodule
86 2922172374 Mesorhizobium sp. M7A.F.Ca.CA.002.06.1.1 Isolate Nodule
87 2922178524 Mesorhizobium sp. M7A.F.Ca.CA.002.09.1.1 Isolate Nodule
88 2924748358 Mesorhizobium sp. M7A.F.Ca.CA.002.14.1.2 Isolate Nodule
89 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
90 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
91 2933599457 Rhizobium phaseoli M3 Isolate Nodule
92 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
93 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
94 2937868953 Mesorhizobium sp. M7A.F.Ca.CA.001.13.2.1 Isolate Nodule
95 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
96 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
97 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
98 2958137437 Mesorhizobium sp. M7A.F.Ca.CA.002.04.1.1 Isolate Nodule
99 2958158011 Mesorhizobium sp. M7A.F.Ca.CA.002.15.2.1 Isolate Nodule
100 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
101 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
102 2961136820 Mesorhizobium sp. M7A.F.Ca.AU.001.01.1.1 Isolate Nodule
103 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
104 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
105 2965025482 Mesorhizobium sp. Primo-A Isolate Nodule
106 2965032056 Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 Isolate Nodule
107 2965040258 Mesorhizobium sp. M7A.F.Ca.CA.001.06.1.1 Isolate Nodule
108 2965047637 Mesorhizobium sp. M7A.F.Ca.US.014.04.1.1 Isolate Nodule
109 2965089291 Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 Isolate Nodule
110 2965102966 Mesorhizobium sp. M7A.F.Ca.AU.002.02.1.1 Isolate Nodule
111 2965110997 Mesorhizobium sp. M7A.F.Ca.US.003.02.2.1 Isolate Nodule
112 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
113 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
114 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
115 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
116 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
117 2970547951 Mesorhizobium sp. M7A.F.Ca.AU.002.04.1.1 Isolate Nodule
118 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
119 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
120 2977872689 Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 Isolate Nodule
121 2977915119 Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 Isolate Nodule
122 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
123 2977935797 Mesorhizobium sp. M7A.F.Ca.CA.002.12.1.1 Isolate Nodule
124 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
125 2977950692 Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 Isolate Nodule
126 2977957713 Mesorhizobium sp. M7A.F.Ca.US.001.02.1.1 Isolate Nodule
127 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
128 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
129 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
130 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
131 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
132 2979793036 Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 Isolate Nodule
133 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
134 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
135 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
136 2987645492 Mesorhizobium sp. M7A.F.Ca.CA.002.10.1.1 Isolate Nodule
137 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
138 2987673487 Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 Isolate Nodule
139 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
140 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
141 3004167301 Mesorhizobium loti 582 Isolate Unclassified
142 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
143 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
144 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
145 3004239961 Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 Isolate Nodule
146 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
147 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
148 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
149 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
150 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
151 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
152 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
153 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
154 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
155 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
156 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
157 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
158 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
159 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
160 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
161 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
162 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
163 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
164 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
165 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
166 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
167 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
168 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
169 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
170 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
171 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
172 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
173 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
174 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
175 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
176 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
177 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
178 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
179 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
180 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
181 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
182 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
183 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
184 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
185 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
186 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
187 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
189 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
190 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
191 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
192 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
193 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
194 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
195 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
196 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
197 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
198 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
199 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
200 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
201 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
202 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
203 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
204 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
205 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
206 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
207 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
208 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
209 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
210 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
211 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
212 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
213 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
214 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
215 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
216 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
217 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
218 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
219 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
220 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
221 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
222 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
223 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
224 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
225 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
226 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
227 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
228 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
229 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
230 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
231 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
232 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
233 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
234 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
235 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
236 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
237 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
238 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
239 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
240 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
241 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
242 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
243 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
244 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
245 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
246 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
247 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
248 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
249 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
250 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
251 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
252 641522639 Methylobacterium sp. 4-46 Isolate Nodule
253 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
254 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
255 8004300914 Mesorhizobium sp. M7A.F.Ca.CA.002.07.1.1 Isolate Nodule
256 8004361976 Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 Isolate Nodule
257 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
258 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
259 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
260 8004695233 Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 Isolate Nodule
261 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
262 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
263 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
264 8054558443 Rhizobium alarense TRM95111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 51.8
Metatranscriptomes 0
Isolates 48.2

Biome Distribution

Category Percentage (%)
Aerial Root 0.3
Bulb 0
Endosphere 18.26
Nodule 36.23
Rhizoplane 1.8
Rhizosphere 19.46
Stem 0
Stem Tuber 0
Unclassified 23.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10032914 3300001979 Bacteria 1652
2 JGI25153J46596_10047424 3300003215 Bacteria 1264
3 Ga0055542_1000977 3300003762 Bacteria 18599
4 Ga0055531_10005492 3300003794 Bacteria 7414
5 Ga0065165_1000807 3300005262 Bacteria 41747
6 Ga0070669_100547148 3300005353 Bacteria 965
7 Ga0068853_100248847 3300005539 Bacteria 1630
8 Ga0068853_100430553 3300005539 Bacteria 1238
9 Ga0070665_100015378 3300005548 Bacteria 7685
10 Ga0070665_100026000 3300005548 Bacteria 5896
11 Ga0070665_100087084 3300005548 Bacteria 3129
12 Ga0070665_100292588 3300005548 Bacteria 1631
13 Ga0068855_100093808 3300005563 Bacteria 3461
14 Ga0068856_100335058 3300005614 Bacteria 1531
15 Ga0075365_10012485 3300006038 Bacteria 5048
16 Ga0075365_10020711 3300006038 Bacteria 4084
17 Ga0075365_10146403 3300006038 Bacteria 1641
18 Ga0075364_10000266 3300006051 Bacteria 25404
19 Ga0075364_10036525 3300006051 Bacteria 3176
20 Ga0075364_10111750 3300006051 Bacteria 1824
21 Ga0075364_10174804 3300006051 Bacteria 1452
22 Ga0075362_10120003 3300006177 Bacteria 1244
23 Ga0075362_10210083 3300006177 Bacteria 949
24 Ga0075367_10020834 3300006178 Bacteria 3657
25 Ga0075369_10046369 3300006186 Bacteria 1871
26 Ga0075366_10017716 3300006195 Bacteria 4104
27 Ga0075366_10206173 3300006195 Bacteria 1196
28 Ga0075370_10276114 3300006353 Bacteria 998
29 Ga0079104_1000045 3300006946 Bacteria 183705
30 Ga0105240_10601540 3300009093 Bacteria 1211
31 Ga0105243_10003039 3300009148 Bacteria 13829
32 Ga0105237_10096517 3300009545 Bacteria 2946
33 Ga0105237_10931415 3300009545 Bacteria 876
34 Ga0123341_1030503 3300009765 Bacteria 4060
35 Ga0123342_1013401 3300009766 Bacteria 8235
36 Ga0105239_10050667 3300010375 Bacteria 4553
37 Ga0105239_10085387 3300010375 Bacteria 3478
38 Ga0105239_10304666 3300010375 Bacteria 1794
39 Ga0105246_10127400 3300011119 Bacteria 1896
40 Ga0157373_10122616 3300013100 Bacteria 1827
41 Ga0157373_10182431 3300013100 Bacteria 1478
42 Ga0157371_10000017 3300013102 Bacteria 320830
43 Ga0157370_10000461 3300013104 Bacteria 50850
44 Ga0157370_10408727 3300013104 Bacteria 1249
45 Ga0157370_10880104 3300013104 Bacteria 813
46 Ga0157369_10378139 3300013105 Bacteria 1470
47 Ga0163163_10214251 3300014325 Bacteria 1975
48 Ga0182008_10005747 3300014497 Bacteria 7023
49 Ga0182006_1080120 3300015261 Bacteria 1193
50 Ga0182007_10017466 3300015262 Bacteria 2619
51 Ga0209677_113687 3300025253 Bacteria 1143
52 Ga0209148_1000056 3300025254 Bacteria 363380
53 Ga0209130_1038218 3300025284 Bacteria 942
54 Ga0209025_1001339 3300025294 Bacteria 33228
55 Ga0209025_1078335 3300025294 Bacteria 1135
56 Ga0209758_1015154 3300025297 Bacteria 4020
57 Ga0209758_1017062 3300025297 Bacteria 3644
58 Ga0209050_1013235 3300025298 Bacteria 3684
59 Ga0209257_1001248 3300025304 Bacteria 31453
60 Ga0207647_10007023 3300025904 Bacteria 8166
61 Ga0207645_10240632 3300025907 Bacteria 1196
62 Ga0207654_10554049 3300025911 Bacteria 817
63 Ga0207695_10134580 3300025913 Bacteria 2426
64 Ga0207671_10053418 3300025914 Bacteria 2994
65 Ga0207681_10503286 3300025923 Bacteria 992
66 Ga0207667_10168068 3300025949 Bacteria 2254
67 Ga0207640_10199944 3300025981 Bacteria 1514
68 Ga0207639_10637385 3300026041 Bacteria 985
69 Ga0207678_10161808 3300026067 Bacteria 1911
70 Ga0207702_10559178 3300026078 Bacteria 1120
71 Ga0209281_1000034 3300027111 Bacteria 382562
72 Ga0209371_1004009 3300027312 Bacteria 6678
73 Ga0209813_10001863 3300027866 Bacteria 4755
74 Ga0268266_10034105 3300028379 Bacteria 4327
75 Ga0268266_10041367 3300028379 Bacteria 3932
76 Ga0268266_10054508 3300028379 Bacteria 3436
77 Ga0307517_10045464 3300028786 Bacteria 4609
78 Ga0307517_10309262 3300028786 Bacteria 881
79 Ga0307515_10024322 3300028794 Bacteria 10561
80 Ga0307515_10041648 3300028794 Bacteria 7212
81 Ga0307515_10203741 3300028794 Bacteria 1846
82 Ga0268256_1003742 3300030500 Bacteria 6678
83 Ga0395900_1012658 3300037418 Bacteria 750
84 Ga0395905_0075715 3300037471 Bacteria 3154
85 Ga0395905_0149988 3300037471 Bacteria 2193
86 Ga0395905_0737379 3300037471 Bacteria 887
87 Ga0451841_0178397 3300041498 Bacteria 723
88 Ga0495585_0045265 3300046492 Bacteria 2457
89 Ga0495632_0070724 3300046519 Bacteria 1678
90 Ga0495643_0162919 3300046522 Bacteria 1096
91 Ga0495654_0007128 3300046530 Bacteria 6283
92 Ga0495633_0042246 3300046558 Bacteria 2166
93 Ga0495686_0212122 3300047472 Bacteria 1106
94 Ga0495686_0432196 3300047472 Bacteria 702
95 Ga0496110_0426718 3300048913 Bacteria 1209
96 Ga0496111_0071895 3300048914 Bacteria 2518
97 Ga0496112_0012765 3300048915 Bacteria 7731
98 Ga0496113_0049336 3300048916 Bacteria 3134
99 Ga0496116_0000142 3300048919 Bacteria 150342
100 Ga0496116_0059007 3300048919 Bacteria 2498
101 Ga0496116_0108824 3300048919 Bacteria 1635
102 Ga0496116_0111874 3300048919 Bacteria 1602
103 Ga0496117_0000002 3300048920 Bacteria 2483758
104 Ga0496117_0013707 3300048920 Bacteria 7046
105 Ga0496118_0000087 3300048921 Bacteria 176693
106 Ga0496118_0218616 3300048921 Bacteria 1111
107 Ga0496119_0059072 3300048922 Bacteria 2306
108 Ga0496119_0079499 3300048922 Bacteria 1894
109 Ga0496119_0120613 3300048922 Bacteria 1442
110 Ga0496120_0000180 3300048923 Bacteria 107518
111 Ga0496120_0003999 3300048923 Bacteria 12813
112 Ga0496120_0052247 3300048923 Bacteria 2329
113 Ga0496120_0136561 3300048923 Bacteria 1249
114 Ga0496121_0000003 3300048924 Bacteria 1191431
115 Ga0496121_0001450 3300048924 Bacteria 40031
116 Ga0496121_0132182 3300048924 Bacteria 1865
117 Ga0496121_0593629 3300048924 Bacteria 685
118 Ga0496122_0000004 3300048925 Bacteria 645283
119 Ga0496122_0000157 3300048925 Bacteria 159733
120 Ga0496122_0025859 3300048925 Bacteria 5082
121 Ga0496122_0040455 3300048925 Bacteria 3703
122 Ga0496122_0074811 3300048925 Bacteria 2393
123 Ga0496122_0096737 3300048925 Bacteria 1989
124 Ga0496122_0125416 3300048925 Bacteria 1644
125 Ga0496122_0212506 3300048925 Bacteria 1119
126 Ga0496123_0000007 3300048926 Bacteria 645283
127 Ga0496123_0000048 3300048926 Bacteria 244152
128 Ga0496123_0005261 3300048926 Bacteria 13130
129 Ga0496123_0025113 3300048926 Bacteria 4502
130 Ga0496123_0038559 3300048926 Bacteria 3355
131 Ga0496123_0075763 3300048926 Bacteria 2074
132 Ga0496124_0000308 3300048927 Bacteria 90566
133 Ga0496124_0003421 3300048927 Bacteria 19463
134 Ga0496124_0103023 3300048927 Bacteria 2309
135 Ga0496124_0112559 3300048927 Bacteria 2188
136 Ga0496124_0167698 3300048927 Bacteria 1704
137 Ga0496125_0000039 3300048928 Bacteria 318665
138 Ga0496125_0080490 3300048928 Bacteria 2492
139 Ga0496126_0002821 3300048929 Bacteria 22781
140 Ga0496126_0058523 3300048929 Bacteria 3474
141 nmdc:mga03683_31283_c1 3300050489 Bacteria 2134
142 nmdc:mga03683_34507_c1 3300050489 Bacteria 2047
143 nmdc:mga03n38_74639_c1 3300050490 Bacteria 1578
144 nmdc:mga00v17_12_c1 3300050491 Bacteria 129050
145 nmdc:mga00v17_38382_c1 3300050491 Bacteria 2864
146 nmdc:mga00v17_40103_c1 3300050491 Bacteria 2808
147 nmdc:mga00v17_60433_c1 3300050491 Bacteria 2327
148 nmdc:mga0yw44_296934_c1 3300050492 Bacteria 1082
149 nmdc:mga0yw44_51708_c1 3300050492 Bacteria 2489
150 nmdc:mga0k408_70324_c1 3300050493 Bacteria 2043
151 nmdc:mga06z11_184879_c1 3300050494 Bacteria 1204
152 nmdc:mga06z11_82639_c1 3300050494 Bacteria 1727
153 nmdc:mga04h51_6042_c1 3300050495 Bacteria 3119
154 nmdc:mga0sz30_346_c1 3300050516 Bacteria 17737
155 Ga0500646_0005111 3300053090 Bacteria 3322
156 Ga0500646_0022895 3300053090 Bacteria 1673
157 Ga0500654_118097 3300053099 Bacteria 1056
158 Ga0500562_054692 3300053108 Bacteria 1070
159 Ga0500572_068201 3300053111 Bacteria 1094
160 Ga0500595_000553 3300053119 Bacteria 22382
161 Ga0500595_034956 3300053119 Bacteria 1659
162 Ga0500608_058361 3300053122 Bacteria 1848
163 Ga0500618_000143 3300053125 Bacteria 59383
164 Ga0500618_005979 3300053125 Bacteria 3627
165 Ga0500618_006107 3300053125 Bacteria 3567
166 Ga0500559_0015637 3300053136 Bacteria 3204
167 Ga0500561_0000078 3300053137 Bacteria 18897
168 Ga0500574_005841 3300053141 Bacteria 2430
169 Ga0500616_0009928 3300053153 Bacteria 5729
170 Ga0500622_0119322 3300053156 Bacteria 1280
171 Ga0500634_0022909 3300053161 Bacteria 3392
172 Ga0500636_0000021 3300053177 Bacteria 96861
173 Ga0500636_0001492 3300053177 Bacteria 12727

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013104 Ga0157370_10408727 Ga0157370_104087272 169
2 3300048913 Ga0496110_0426718 Ga0496110_0426718_352_966 184
3 3300053119 Ga0500595_034956 Ga0500595_034956_682_1296 191
4 3300047472 Ga0495686_0432196 Ga0495686_0432196_36_650 195
5 iso_pu_bacteria 2856356410 2856357903 197
6 iso_pu_bacteria 2599185236 2599721548 199
7 iso_pu_bacteria 2821123053 2821127348 199
8 iso_pu_bacteria 2838736955 2838737872 199
9 iso_pu_bacteria 2841840854 2841841759 199
10 iso_pu_bacteria 2842140634 2842141537 199
11 iso_pu_bacteria 2857531043 2857532236 199
12 iso_pu_bacteria 2937848649 2937852387 199
13 iso_pu_bacteria 3004211236 3004214662 199
14 iso_pu_bacteria 3004218560 3004219345 199
15 iso_pu_bacteria 2509276018 2509371808 200
16 iso_pu_bacteria 2512875016 2512929845 200
17 iso_pu_bacteria 2512875024 2512964621 200
18 iso_pu_bacteria 2513237164 2514033280 200
19 iso_pu_bacteria 2545555834 2545675573 200
20 iso_pu_bacteria 2554235003 2554248213 200
21 iso_pu_bacteria 2558860242 2559295329 200
22 iso_pu_bacteria 2582581866 2585394698 200
23 iso_pu_bacteria 2588253730 2588515441 200
24 iso_pu_bacteria 2600254933 2600374160 200
25 iso_pu_bacteria 2643221558 2643811363 200
26 iso_pu_bacteria 2643221568 2643856791 200
27 iso_pu_bacteria 2643221579 2643905801 200
28 iso_pu_bacteria 2643221595 2643985315 200
29 iso_pu_bacteria 2643221627 2644155049 200
30 iso_pu_bacteria 2643221693 2644521977 200
31 iso_pu_bacteria 2687453392 2688600108 200
32 iso_pu_bacteria 2721755686 2723577360 200
33 iso_pu_bacteria 2756170246 2756673329 200
34 iso_pu_bacteria 2775507049 2776913632 200
35 iso_pu_bacteria 2808606387 2808987937 200
36 iso_pu_bacteria 2818991461 2819685101 200
37 iso_pu_bacteria 2844002411 2844005789 200
38 iso_pu_bacteria 2856328259 2856333362 200
39 iso_pu_bacteria 2856334872 2856337573 200
40 iso_pu_bacteria 2856364286 2856364571 200
41 iso_pu_bacteria 2857349434 2857355902 200
42 iso_pu_bacteria 2857367948 2857370862 200
43 iso_pu_bacteria 2869249662 2869252492 200
44 iso_pu_bacteria 2869264136 2869268900 200
45 iso_pu_bacteria 2869271264 2869271725 200
46 iso_pu_bacteria 2869285874 2869292756 200
47 iso_pu_bacteria 2871429161 2871429569 200
48 iso_pu_bacteria 2871459585 2871464738 200
49 iso_pu_bacteria 2871466892 2871473738 200
50 iso_pu_bacteria 2871488783 2871493896 200
51 iso_pu_bacteria 2874146452 2874147033 200
52 iso_pu_bacteria 2874155637 2874156988 200
53 iso_pu_bacteria 2874162495 2874163443 200
54 iso_pu_bacteria 2874168670 2874175472 200
55 iso_pu_bacteria 2876363079 2876366592 200
56 iso_pu_bacteria 2876399893 2876401259 200
57 iso_pu_bacteria 2876406927 2876409802 200
58 iso_pu_bacteria 2876413966 2876414427 200
59 iso_pu_bacteria 2878745973 2878746259 200
60 iso_pu_bacteria 2878753008 2878756472 200
61 iso_pu_bacteria 2878774303 2878776049 200
62 iso_pu_bacteria 2878781027 2878784721 200
63 iso_pu_bacteria 2881845957 2881847058 200
64 iso_pu_bacteria 2881861095 2881865089 200
65 iso_pu_bacteria 2882632389 2882635068 200
66 iso_pu_bacteria 2882912400 2882917456 200
67 iso_pu_bacteria 2885305155 2885311516 200
68 iso_pu_bacteria 2885318864 2885324728 200
69 iso_pu_bacteria 2885326080 2885330385 200
70 iso_pu_bacteria 2885334103 2885338224 200
71 iso_pu_bacteria 2888337043 2888341274 200
72 iso_pu_bacteria 2888350351 2888350590 200
73 iso_pu_bacteria 2889010040 2889012930 200
74 iso_pu_bacteria 2899803654 2899807598 200
75 iso_pu_bacteria 2899845264 2899850650 200
76 iso_pu_bacteria 2903448605 2903452767 200
77 iso_pu_bacteria 2903492973 2903500601 200
78 iso_pu_bacteria 2903492973 2903502600 200
79 iso_pu_bacteria 2903521522 2903524460 200
80 iso_pu_bacteria 2903528002 2903530090 200
81 iso_pu_bacteria 2906308376 2906308468 200
82 iso_pu_bacteria 2906321335 2906321940 200
83 iso_pu_bacteria 2906363423 2906365108 200
84 iso_pu_bacteria 2906370794 2906372660 200
85 iso_pu_bacteria 2906378014 2906378345 200
86 iso_pu_bacteria 2906386501 2906390418 200
87 iso_pu_bacteria 2906393657 2906401358 200
88 iso_pu_bacteria 2906408224 2906411660 200
89 iso_pu_bacteria 2919166419 2919169222 200
90 iso_pu_bacteria 2919450847 2919454123 200
91 iso_pu_bacteria 2922151315 2922154791 200
92 iso_pu_bacteria 2922172374 2922176848 200
93 iso_pu_bacteria 2922178524 2922180568 200
94 iso_pu_bacteria 2924748358 2924749964 200
95 iso_pu_bacteria 2924784321 2924788050 200
96 iso_pu_bacteria 2926760298 2926762847 200
97 iso_pu_bacteria 2933599457 2933604373 200
98 iso_pu_bacteria 2937813078 2937814318 200
99 iso_pu_bacteria 2958041894 2958049707 200
100 iso_pu_bacteria 2958122699 2958123508 200
101 iso_pu_bacteria 2958130278 2958137351 200
102 iso_pu_bacteria 2958137437 2958139577 200
103 iso_pu_bacteria 2958158011 2958161929 200
104 iso_pu_bacteria 2958179912 2958180272 200
105 iso_pu_bacteria 2961077736 2961078104 200
106 iso_pu_bacteria 2961136820 2961141038 200
107 iso_pu_bacteria 2961170736 2961172761 200
108 iso_pu_bacteria 2963644680 2963649387 200
109 iso_pu_bacteria 2965025482 2965030634 200
110 iso_pu_bacteria 2965032056 2965034948 200
111 iso_pu_bacteria 2965040258 2965043822 200
112 iso_pu_bacteria 2965047637 2965050350 200
113 iso_pu_bacteria 2965089291 2965095902 200
114 iso_pu_bacteria 2965102966 2965106913 200
115 iso_pu_bacteria 2965110997 2965111713 200
116 iso_pu_bacteria 2967996073 2967997973 200
117 iso_pu_bacteria 2968003550 2968008624 200
118 iso_pu_bacteria 2968083720 2968084548 200
119 iso_pu_bacteria 2968117919 2968118246 200
120 iso_pu_bacteria 2970503327 2970505355 200
121 iso_pu_bacteria 2970547951 2970551085 200
122 iso_pu_bacteria 2977821940 2977825653 200
123 iso_pu_bacteria 2977843712 2977844902 200
124 iso_pu_bacteria 2977872689 2977874253 200
125 iso_pu_bacteria 2977915119 2977918906 200
126 iso_pu_bacteria 2977922695 2977927207 200
127 iso_pu_bacteria 2977935797 2977937032 200
128 iso_pu_bacteria 2977942078 2977943806 200
129 iso_pu_bacteria 2977950692 2977954352 200
130 iso_pu_bacteria 2977957713 2977961525 200
131 iso_pu_bacteria 2977971508 2977972868 200
132 iso_pu_bacteria 2978969890 2978974597 200
133 iso_pu_bacteria 2979089926 2979094660 200
134 iso_pu_bacteria 2979095461 2979100775 200
135 iso_pu_bacteria 2979742915 2979747565 200
136 iso_pu_bacteria 2979793036 2979793110 200
137 iso_pu_bacteria 2979808191 2979810076 200
138 iso_pu_bacteria 2984587000 2984589919 200
139 iso_pu_bacteria 2987636660 2987639716 200
140 iso_pu_bacteria 2987645492 2987646804 200
141 iso_pu_bacteria 2987652177 2987658446 200
142 iso_pu_bacteria 2987673487 2987675992 200
143 iso_pu_bacteria 3000135777 3000141826 200
144 iso_pu_bacteria 3003665799 3003670197 200
145 iso_pu_bacteria 3004167301 3004170874 200
146 iso_pu_bacteria 3004203850 3004207289 200
147 iso_pu_bacteria 3004239961 3004244268 200
148 iso_pu_bacteria 3004334049 3004339434 200
149 iso_pu_bacteria 637000159 637079588 200
150 iso_pu_bacteria 641522639 641646270 200
151 iso_pu_bacteria 649633066 649874585 200
152 iso_pu_bacteria 650716007 650740539 200
153 iso_pu_bacteria 8004300914 8004305461 200
154 iso_pu_bacteria 8004361976 8004362942 200
155 iso_pu_bacteria 8004374579 8004378061 200
156 iso_pu_bacteria 8004387939 8004388424 200
157 iso_pu_bacteria 8004640170 8004641716 200
158 iso_pu_bacteria 8004695233 8004701120 200
159 iso_pu_bacteria 8004714634 8004714724 200
160 iso_pu_bacteria 8018150411 8018151387 200
161 iso_pu_bacteria 8054460903 8054462954 200
162 iso_pu_bacteria 8054558443 8054562803 200
163 3300053122 Ga0500608_058361 Ga0500608_058361_152_817 201
164 3300046530 Ga0495654_0007128 Ga0495654_0007128_4249_4857 202
165 3300047472 Ga0495686_0212122 Ga0495686_0212122_121_741 202
166 3300053111 Ga0500572_068201 Ga0500572_068201_132_740 202
167 3300053125 Ga0500618_000143 Ga0500618_000143_29202_29822 202
168 3300053136 Ga0500559_0015637 Ga0500559_0015637_2386_2994 202
169 iso_pu_bacteria 2922130491 2922135024 202
170 3300006051 Ga0075364_10174804 Ga0075364_101748043 203
171 3300006946 Ga0079104_1000045 Ga0079104_1000045137 203
172 3300027111 Ga0209281_1000034 Ga0209281_1000034214 203
173 3300046522 Ga0495643_0162919 Ga0495643_0162919_327_950 203
174 3300048914 Ga0496111_0071895 Ga0496111_0071895_1379_2002 203
175 3300048924 Ga0496121_0132182 Ga0496121_0132182_1061_1672 203
176 3300048925 Ga0496122_0074811 Ga0496122_0074811_1685_2308 203
177 3300048926 Ga0496123_0005261 Ga0496123_0005261_6153_6776 203
178 3300048927 Ga0496124_0112559 Ga0496124_0112559_498_1109 203
179 3300001979 JGI24740J21852_10032914 JGI24740J21852_100329142 204
180 3300003215 JGI25153J46596_10047424 JGI25153J46596_100474241 204
181 3300003762 Ga0055542_1000977 Ga0055542_10009779 204
182 3300003794 Ga0055531_10005492 Ga0055531_100054926 204
183 3300005262 Ga0065165_1000807 Ga0065165_100080714 204
184 3300005353 Ga0070669_100547148 Ga0070669_1005471482 204
185 3300005539 Ga0068853_100248847 Ga0068853_1002488473 204
186 3300005539 Ga0068853_100430553 Ga0068853_1004305532 204
187 3300005548 Ga0070665_100015378 Ga0070665_1000153784 204
188 3300005548 Ga0070665_100026000 Ga0070665_1000260002 204
189 3300005548 Ga0070665_100087084 Ga0070665_1000870844 204
190 3300005548 Ga0070665_100292588 Ga0070665_1002925883 204
191 3300005563 Ga0068855_100093808 Ga0068855_1000938083 204
192 3300005614 Ga0068856_100335058 Ga0068856_1003350583 204
193 3300006038 Ga0075365_10012485 Ga0075365_100124851 204
194 3300006038 Ga0075365_10020711 Ga0075365_100207114 204
195 3300006038 Ga0075365_10146403 Ga0075365_101464032 204
196 3300006051 Ga0075364_10000266 Ga0075364_1000026618 204
197 3300006051 Ga0075364_10036525 Ga0075364_100365252 204
198 3300006051 Ga0075364_10111750 Ga0075364_101117503 204
199 3300006177 Ga0075362_10120003 Ga0075362_101200032 204
200 3300006177 Ga0075362_10210083 Ga0075362_102100832 204
201 3300006178 Ga0075367_10020834 Ga0075367_100208345 204
202 3300006186 Ga0075369_10046369 Ga0075369_100463692 204
203 3300006195 Ga0075366_10017716 Ga0075366_100177164 204
204 3300006195 Ga0075366_10206173 Ga0075366_102061732 204
205 3300006353 Ga0075370_10276114 Ga0075370_102761142 204
206 3300009093 Ga0105240_10601540 Ga0105240_106015402 204
207 3300009148 Ga0105243_10003039 Ga0105243_1000303914 204
208 3300009545 Ga0105237_10096517 Ga0105237_100965173 204
209 3300009545 Ga0105237_10931415 Ga0105237_109314151 204
210 3300009765 Ga0123341_1030503 Ga0123341_10305032 204
211 3300009766 Ga0123342_1013401 Ga0123342_101340110 204
212 3300010375 Ga0105239_10050667 Ga0105239_100506675 204
213 3300010375 Ga0105239_10085387 Ga0105239_100853872 204
214 3300010375 Ga0105239_10304666 Ga0105239_103046662 204
215 3300011119 Ga0105246_10127400 Ga0105246_101274002 204
216 3300013100 Ga0157373_10122616 Ga0157373_101226162 204
217 3300013100 Ga0157373_10182431 Ga0157373_101824312 204
218 3300013102 Ga0157371_10000017 Ga0157371_1000001738 204
219 3300013104 Ga0157370_10000461 Ga0157370_1000046142 204
220 3300013104 Ga0157370_10880104 Ga0157370_108801041 204
221 3300013105 Ga0157369_10378139 Ga0157369_103781393 204
222 3300014325 Ga0163163_10214251 Ga0163163_102142512 204
223 3300014497 Ga0182008_10005747 Ga0182008_100057475 204
224 3300015261 Ga0182006_1080120 Ga0182006_10801201 204
225 3300015262 Ga0182007_10017466 Ga0182007_100174663 204
226 3300025253 Ga0209677_113687 Ga0209677_1136872 204
227 3300025254 Ga0209148_1000056 Ga0209148_1000056254 204
228 3300025284 Ga0209130_1038218 Ga0209130_10382181 204
229 3300025294 Ga0209025_1001339 Ga0209025_100133932 204
230 3300025294 Ga0209025_1078335 Ga0209025_10783352 204
231 3300025297 Ga0209758_1015154 Ga0209758_10151547 204
232 3300025297 Ga0209758_1017062 Ga0209758_10170623 204
233 3300025298 Ga0209050_1013235 Ga0209050_10132354 204
234 3300025304 Ga0209257_1001248 Ga0209257_10012486 204
235 3300025904 Ga0207647_10007023 Ga0207647_100070233 204
236 3300025907 Ga0207645_10240632 Ga0207645_102406322 204
237 3300025911 Ga0207654_10554049 Ga0207654_105540492 204
238 3300025913 Ga0207695_10134580 Ga0207695_101345802 204
239 3300025914 Ga0207671_10053418 Ga0207671_100534183 204
240 3300025923 Ga0207681_10503286 Ga0207681_105032862 204
241 3300025949 Ga0207667_10168068 Ga0207667_101680682 204
242 3300025981 Ga0207640_10199944 Ga0207640_101999441 204
243 3300026041 Ga0207639_10637385 Ga0207639_106373851 204
244 3300026067 Ga0207678_10161808 Ga0207678_101618084 204
245 3300026078 Ga0207702_10559178 Ga0207702_105591782 204
246 3300027312 Ga0209371_1004009 Ga0209371_10040095 204
247 3300027866 Ga0209813_10001863 Ga0209813_100018633 204
248 3300028379 Ga0268266_10034105 Ga0268266_100341052 204
249 3300028379 Ga0268266_10041367 Ga0268266_100413675 204
250 3300028379 Ga0268266_10054508 Ga0268266_100545083 204
251 3300028786 Ga0307517_10045464 Ga0307517_100454642 204
252 3300028786 Ga0307517_10309262 Ga0307517_103092622 204
253 3300028794 Ga0307515_10024322 Ga0307515_100243227 204
254 3300028794 Ga0307515_10041648 Ga0307515_100416481 204
255 3300028794 Ga0307515_10203741 Ga0307515_102037412 204
256 3300030500 Ga0268256_1003742 Ga0268256_10037426 204
257 3300037418 Ga0395900_1012658 Ga0395900_1012658_42_656 204
258 3300037471 Ga0395905_0075715 Ga0395905_0075715_583_1197 204
259 3300037471 Ga0395905_0149988 Ga0395905_0149988_972_1586 204
260 3300037471 Ga0395905_0737379 Ga0395905_0737379_36_650 204
261 3300041498 Ga0451841_0178397 Ga0451841_0178397_29_643 204
262 3300046492 Ga0495585_0045265 Ga0495585_0045265_1601_2215 204
263 3300046519 Ga0495632_0070724 Ga0495632_0070724_213_827 204
264 3300046558 Ga0495633_0042246 Ga0495633_0042246_991_1629 204
265 3300048915 Ga0496112_0012765 Ga0496112_0012765_6845_7459 204
266 3300048916 Ga0496113_0049336 Ga0496113_0049336_185_799 204
267 3300048919 Ga0496116_0000142 Ga0496116_0000142_117402_118016 204
268 3300048919 Ga0496116_0059007 Ga0496116_0059007_808_1422 204
269 3300048919 Ga0496116_0108824 Ga0496116_0108824_56_670 204
270 3300048919 Ga0496116_0111874 Ga0496116_0111874_118_732 204
271 3300048920 Ga0496117_0000002 Ga0496117_0000002_494145_494759 204
272 3300048920 Ga0496117_0013707 Ga0496117_0013707_1335_1949 204
273 3300048921 Ga0496118_0000087 Ga0496118_0000087_105704_106318 204
274 3300048921 Ga0496118_0218616 Ga0496118_0218616_82_696 204
275 3300048922 Ga0496119_0059072 Ga0496119_0059072_254_868 204
276 3300048922 Ga0496119_0079499 Ga0496119_0079499_819_1433 204
277 3300048922 Ga0496119_0120613 Ga0496119_0120613_752_1366 204
278 3300048923 Ga0496120_0000180 Ga0496120_0000180_95094_95708 204
279 3300048923 Ga0496120_0003999 Ga0496120_0003999_193_807 204
280 3300048923 Ga0496120_0052247 Ga0496120_0052247_526_1140 204
281 3300048923 Ga0496120_0136561 Ga0496120_0136561_556_1170 204
282 3300048924 Ga0496121_0000003 Ga0496121_0000003_367569_368183 204
283 3300048924 Ga0496121_0001450 Ga0496121_0001450_1624_2238 204
284 3300048924 Ga0496121_0593629 Ga0496121_0593629_18_632 204
285 3300048925 Ga0496122_0000004 Ga0496122_0000004_95099_95713 204
286 3300048925 Ga0496122_0000157 Ga0496122_0000157_83671_84297 204
287 3300048925 Ga0496122_0025859 Ga0496122_0025859_138_752 204
288 3300048925 Ga0496122_0040455 Ga0496122_0040455_292_906 204
289 3300048925 Ga0496122_0096737 Ga0496122_0096737_156_770 204
290 3300048925 Ga0496122_0125416 Ga0496122_0125416_148_777 204
291 3300048925 Ga0496122_0212506 Ga0496122_0212506_199_813 204
292 3300048926 Ga0496123_0000007 Ga0496123_0000007_95099_95713 204
293 3300048926 Ga0496123_0000048 Ga0496123_0000048_159856_160482 204
294 3300048926 Ga0496123_0025113 Ga0496123_0025113_288_902 204
295 3300048926 Ga0496123_0038559 Ga0496123_0038559_539_1153 204
296 3300048926 Ga0496123_0075763 Ga0496123_0075763_1054_1683 204
297 3300048927 Ga0496124_0000308 Ga0496124_0000308_84037_84651 204
298 3300048927 Ga0496124_0003421 Ga0496124_0003421_4775_5389 204
299 3300048927 Ga0496124_0103023 Ga0496124_0103023_557_1186 204
300 3300048927 Ga0496124_0167698 Ga0496124_0167698_486_1100 204
301 3300048928 Ga0496125_0000039 Ga0496125_0000039_146205_146819 204
302 3300048928 Ga0496125_0080490 Ga0496125_0080490_1539_2153 204
303 3300048929 Ga0496126_0002821 Ga0496126_0002821_15500_16114 204
304 3300048929 Ga0496126_0058523 Ga0496126_0058523_663_1277 204
305 3300050489 nmdc:mga03683_31283_c1 nmdc:mga03683_31283_c1_990_1604 204
306 3300050489 nmdc:mga03683_34507_c1 nmdc:mga03683_34507_c1_1217_1831 204
307 3300050490 nmdc:mga03n38_74639_c1 nmdc:mga03n38_74639_c1_949_1563 204
308 3300050491 nmdc:mga00v17_12_c1 nmdc:mga00v17_12_c1_41996_42610 204
309 3300050491 nmdc:mga00v17_38382_c1 nmdc:mga00v17_38382_c1_68_682 204
310 3300050491 nmdc:mga00v17_40103_c1 nmdc:mga00v17_40103_c1_1733_2347 204
311 3300050491 nmdc:mga00v17_60433_c1 nmdc:mga00v17_60433_c1_513_1127 204
312 3300050492 nmdc:mga0yw44_296934_c1 nmdc:mga0yw44_296934_c1_202_816 204
313 3300050492 nmdc:mga0yw44_51708_c1 nmdc:mga0yw44_51708_c1_757_1371 204
314 3300050493 nmdc:mga0k408_70324_c1 nmdc:mga0k408_70324_c1_1258_1872 204
315 3300050494 nmdc:mga06z11_184879_c1 nmdc:mga06z11_184879_c1_555_1169 204
316 3300050494 nmdc:mga06z11_82639_c1 nmdc:mga06z11_82639_c1_963_1577 204
317 3300050495 nmdc:mga04h51_6042_c1 nmdc:mga04h51_6042_c1_1359_1973 204
318 3300050516 nmdc:mga0sz30_346_c1 nmdc:mga0sz30_346_c1_11002_11616 204
319 3300053090 Ga0500646_0005111 Ga0500646_0005111_1344_1958 204
320 3300053090 Ga0500646_0022895 Ga0500646_0022895_998_1612 204
321 3300053099 Ga0500654_118097 Ga0500654_118097_81_695 204
322 3300053108 Ga0500562_054692 Ga0500562_054692_210_824 204
323 3300053119 Ga0500595_000553 Ga0500595_000553_5390_6049 204
324 3300053125 Ga0500618_005979 Ga0500618_005979_1066_1680 204
325 3300053125 Ga0500618_006107 Ga0500618_006107_1826_2440 204
326 3300053137 Ga0500561_0000078 Ga0500561_0000078_749_1363 204
327 3300053141 Ga0500574_005841 Ga0500574_005841_153_767 204
328 3300053153 Ga0500616_0009928 Ga0500616_0009928_977_1591 204
329 3300053156 Ga0500622_0119322 Ga0500622_0119322_265_879 204
330 3300053161 Ga0500634_0022909 Ga0500634_0022909_173_820 204
331 3300053177 Ga0500636_0000021 Ga0500636_0000021_92630_93346 204
332 3300053177 Ga0500636_0001492 Ga0500636_0001492_7510_8124 204
333 iso_pu_bacteria 2818991467 2819716981 204
334 iso_pu_bacteria 2937868953 2937869951 204

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01810

LysE

LysE type translocator

48

238

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lds-assembly1.cif.gz_A the inward-facing structure of the glucose transporter from staphylococcus epidermidis 0.3654 23 204
4oyd-assembly2.cif.gz_D crystal structure of a computationally designed inhibitor of an epstein-barr viral bcl-2 protein 0.339 76 175
8ex4-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1) 0.3387 5 201
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.3283 37 204
4lds-assembly1.cif.gz_A the inward-facing structure of the glucose transporter from staphylococcus epidermidis 0.3167 23 204
ID Description Score Start End Superfamily
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.581 32 200 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5671 32 200 1.20.1250.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5447 2 201 1.20.1250.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5231 2 201 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4177 12 194 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1Q8ZNL1-F1-model_v4 RhtB family transporter 0.7947 1 203 GO:0005886
GO:0015171
AF-A0A109W5B2-F1-model_v4 Homoserine/homoserine lactone efflux protein 0.7889 1 200 GO:0005886
GO:0042970
AF-A0A1A8T548-F1-model_v4 Homoserine/homoserine lactone efflux protein 0.7878 1 203 GO:0005886
GO:0015171
AF-A0A1Q8ZNL1-F1-model_v4 RhtB family transporter 0.7878 1 203 GO:0005886
GO:0015171
AF-A0A1A8T548-F1-model_v4 Homoserine/homoserine lactone efflux protein 0.7812 1 203 GO:0005886
GO:0015171

Feature Viewer

pLDDT pTM Quality
84.64 0.78 High
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Predicted Structure (AlphaFold2)

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