F412013

General Info

Members Datasets Scaffolds Average Seq Length
334 267 668 459

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185307|2599970230
Length 501
Sequence QDIAAHKRARKAGIASFIGTTIEWYDFYAYGIAAALVFGKIFFPADLDPGTATLLSFLTLWAGFIARPVGGIIFGHLGDKIGRKTTLVITLVMMGVATTCIGLLPTYLQIGIWAPIALVVLRVIQGVAVGGEWGGAILIASENAPKGKGILYAAFAQQGSPAGNLLATVVFFGLSALPVTDFMLWGWRIPFLLSAALVIVGMVIRLKLEESDDMKRLMAQKKTVKLPILEVLRDHWQIVLLGAGVLPIIHVTYFKSTFALSWATKELGYAQSTFLSVIIVSLIVQFIAQPFGAILVSRIDMRRAFAFMVIPELILMPAMFFAVETKVYWIAVVGMCLATIPHSMFYGAVGGILARAFPTKVRYSGLSIAYQLCSLLVGGATPVLAQGLLNSTGSIIGVAIASACYALVSLVCMLLLLKRIGHTASELSTAEQADADDLAGEAVAVSTQHAHGQQQIPPDVHSERDDGLNIGLVAEAINSAPVTLAAAASEARCQTPCERHG

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
49 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
89 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
106 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
112 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
115 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
142 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
143 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
146 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
154 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
155 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
160 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
169 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
173 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
174 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
175 2511231006 Pseudomonas sp. GM17 Isolate Nodule
176 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
177 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
178 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
179 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
180 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
181 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
182 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
183 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
184 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
185 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
186 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
187 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
188 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
189 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
190 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
191 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
192 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
193 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
194 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
195 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
196 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
197 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
198 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
199 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
200 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
201 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
202 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
203 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
204 2643221548 Streptomyces sp. Root55 Isolate Unclassified
205 2643221561 Nocardioides sp. Root151 Isolate Unclassified
206 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
207 2643221696 Nocardioides sp. Root140 Isolate Unclassified
208 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
209 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
210 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
211 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
212 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
213 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
214 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
215 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
216 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
217 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
218 2818991452 Burkholderia cepacia 561 Isolate Unclassified
219 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
220 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
221 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
222 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
223 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
224 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
225 2862574272 Streptomyces sp. AcE210 Isolate Nodule
226 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
227 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
228 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
229 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
230 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
231 2885266251 Ralstonia sp. SET104 Isolate Nodule
232 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
233 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
234 2904564687 Burkholderia sp. 571 Isolate Unclassified
235 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
236 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
237 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
238 2922554459 Rhodococcus sp. 66b Isolate Unclassified
239 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
240 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
241 2928058823 Ralstonia sp. 1138 Isolate Unclassified
242 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
243 2928163908 Burkholderia sp. 567 Isolate Unclassified
244 2928170801 Burkholderia sp. 572 Isolate Unclassified
245 2928536128 Burkholderia sola 565 Isolate Unclassified
246 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
247 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
248 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
249 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
250 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
251 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
252 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
253 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
254 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
255 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
256 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
257 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
258 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
259 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
260 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
261 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
262 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
263 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
264 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
265 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
266 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
267 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.37
Metatranscriptomes 0.3
Isolates 32.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.47
Nodule 2.99
Rhizoplane 7.19
Rhizosphere 55.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000083 3300001915 Bacteria 23755
2 JGI24740J21852_10000951 3300001979 Bacteria 12867
3 JGI25162J39368_1000129 3300002737 Bacteria 83712
4 JGI25154J39366_1005627 3300002738 Bacteria 1962
5 JGI25163J39215_1000688 3300002771 Bacteria 8961
6 JGI25164J39214_1000101 3300002772 Bacteria 83715
7 JGI25406J46586_10002734 3300003203 Bacteria 8307
8 JGI25165J46597_1000150 3300003214 Bacteria 115430
9 Ga0055539_1000062 3300003752 Bacteria 141171
10 Ga0055532_1000019 3300003758 Bacteria 286358
11 Ga0055525_1000275 3300003759 Bacteria 47849
12 Ga0055527_1001570 3300003760 Bacteria 4623
13 Ga0055535_1000014 3300003761 Bacteria 286358
14 Ga0055542_1000588 3300003762 Bacteria 31406
15 Ga0055542_1008206 3300003762 Bacteria 2057
16 Ga0055529_1000086 3300003763 Bacteria 140681
17 Ga0055536_1000232 3300003781 Bacteria 44724
18 Ga0055528_1004524 3300003790 Bacteria 6676
19 Ga0055530_10000390 3300003791 Bacteria 39310
20 Ga0055541_1000254 3300003841 Bacteria 19058
21 Ga0055541_1004733 3300003841 Bacteria 2445
22 Ga0070658_10035813 3300005327 Bacteria 3998
23 Ga0070683_100251233 3300005329 Bacteria 1682
24 Ga0070660_100000926 3300005339 Bacteria 19602
25 Ga0070661_100000054 3300005344 Bacteria 88505
26 Ga0070659_100000050 3300005366 Bacteria 97735
27 Ga0070659_100004271 3300005366 Bacteria 10199
28 Ga0070714_100097473 3300005435 Bacteria 2585
29 Ga0070713_100238264 3300005436 Bacteria 1656
30 Ga0070663_100000010 3300005455 Bacteria 158193
31 Ga0070663_100058500 3300005455 Bacteria 2768
32 Ga0070664_100000005 3300005564 Bacteria 222746
33 Ga0068857_100005116 3300005577 Bacteria 11155
34 Ga0068854_100000032 3300005578 Bacteria 106054
35 Ga0068856_100000054 3300005614 Bacteria 104246
36 Ga0068856_100277080 3300005614 Bacteria 1694
37 Ga0068852_100011302 3300005616 Bacteria 6715
38 Ga0068864_100012118 3300005618 Bacteria 7124
39 Ga0081539_10000162 3300005985 Bacteria 156292
40 Ga0075370_10012512 3300006353 Bacteria 4486
41 Ga0105250_10012021 3300009092 Bacteria 3584
42 Ga0105240_10028949 3300009093 Bacteria 7225
43 Ga0105240_10062821 3300009093 Bacteria 4622
44 Ga0105245_10172785 3300009098 Bacteria 2059
45 Ga0105243_10001328 3300009148 Bacteria 22052
46 Ga0105237_10091431 3300009545 Bacteria 3033
47 Ga0105238_10023122 3300009551 Bacteria 6339
48 Ga0157373_10006041 3300013100 Bacteria 9052
49 Ga0157371_10000103 3300013102 Bacteria 128611
50 Ga0157371_10006974 3300013102 Bacteria 9197
51 Ga0157370_10001099 3300013104 Bacteria 33935
52 Ga0157369_10075187 3300013105 Bacteria 3622
53 Ga0157372_10000151 3300013307 Bacteria 75926
54 Ga0182008_10003343 3300014497 Bacteria 9741
55 Ga0182006_1004418 3300015261 Bacteria 6943
56 Ga0182006_1011511 3300015261 Bacteria 3890
57 Ga0154015_1417986 3300020610 Bacteria 10957
58 Ga0209760_100244 3300025207 Bacteria 22589
59 Ga0209784_100003 3300025224 Bacteria 1379451
60 Ga0209566_100002 3300025225 Bacteria 2614868
61 Ga0209566_100229 3300025225 Bacteria 54760
62 Ga0209566_101350 3300025225 Bacteria 7755
63 Ga0209674_100008 3300025226 Bacteria 1076909
64 Ga0209674_100346 3300025226 Bacteria 27116
65 Ga0209672_100014 3300025228 Bacteria 546252
66 Ga0209672_100023 3300025228 Bacteria 371758
67 Ga0209672_100788 3300025228 Bacteria 15117
68 Ga0209147_100002 3300025229 Bacteria 2158988
69 Ga0209147_100177 3300025229 Bacteria 79824
70 Ga0209147_100194 3300025229 Bacteria 69330
71 Ga0209147_100257 3300025229 Bacteria 49599
72 Ga0209563_100004 3300025230 Bacteria 1814108
73 Ga0209563_102767 3300025230 Bacteria 3839
74 Ga0207427_100014 3300025231 Bacteria 561361
75 Ga0209437_100016 3300025233 Bacteria 710118
76 Ga0209258_100002 3300025242 Bacteria 2158988
77 Ga0209258_100134 3300025242 Bacteria 174683
78 Ga0209258_100183 3300025242 Bacteria 136466
79 Ga0209646_1000019 3300025246 Bacteria 475248
80 Ga0209026_1010544 3300025250 Bacteria 1719
81 Ga0209677_100009 3300025253 Bacteria 749530
82 Ga0209148_1000035 3300025254 Bacteria 548413
83 Ga0209148_1000193 3300025254 Bacteria 115649
84 Ga0209148_1001762 3300025254 Bacteria 9329
85 Ga0209759_1001051 3300025256 Bacteria 18279
86 Ga0209233_1000036 3300025261 Bacteria 561361
87 Ga0209455_1000076 3300025272 Bacteria 284092
88 Ga0209455_1000232 3300025272 Bacteria 70532
89 Ga0209673_1000140 3300025273 Bacteria 157575
90 Ga0209676_1000032 3300025292 Bacteria 469558
91 Ga0209564_1006713 3300025295 Bacteria 6116
92 Ga0209050_1000025 3300025298 Bacteria 528225
93 Ga0209051_1000039 3300025303 Bacteria 319632
94 Ga0209051_1000047 3300025303 Bacteria 293227
95 Ga0207647_10015859 3300025904 Bacteria 5155
96 Ga0207695_10005643 3300025913 Bacteria 16518
97 Ga0207695_10008215 3300025913 Bacteria 13110
98 Ga0207695_10020073 3300025913 Bacteria 7667
99 Ga0207671_10024446 3300025914 Bacteria 4543
100 Ga0207657_10001883 3300025919 Bacteria 22679
101 Ga0207649_10000087 3300025920 Bacteria 78222
102 Ga0207664_10134081 3300025929 Bacteria 2088
103 Ga0207690_10000047 3300025932 Bacteria 116333
104 Ga0207690_10005360 3300025932 Bacteria 7558
105 Ga0207709_10001633 3300025935 Bacteria 15235
106 Ga0207661_10163420 3300025944 Bacteria 1933
107 Ga0207679_10000020 3300025945 Bacteria 225727
108 Ga0207667_10183334 3300025949 Bacteria 2149
109 Ga0207640_10000017 3300025981 Bacteria 208145
110 Ga0207678_10000008 3300026067 Bacteria 168926
111 Ga0207678_10092477 3300026067 Bacteria 2585
112 Ga0207702_10000017 3300026078 Bacteria 222964
113 Ga0207674_10001770 3300026116 Bacteria 27610
114 Ga0207698_10026690 3300026142 Bacteria 4088
115 Ga0209371_1001185 3300027312 Bacteria 18949
116 Ga0268256_1001051 3300030500 Bacteria 18470
117 Ga0307408_100005180 3300031548 Bacteria 8745
118 Ga0307518_10001044 3300031838 Bacteria 20736
119 Ga0307416_100059943 3300032002 Bacteria 3096
120 Ga0307414_10175550 3300032004 Bacteria 1718
121 Ga0395900_0041367 3300037418 Bacteria 4751
122 Ga0395905_0152880 3300037471 Bacteria 2171
123 Ga0395901_0025432 3300038443 Bacteria 6077
124 Ga0436365_1557373 3300039437 Bacteria 4523
125 Ga0436361_0105554 3300039447 Bacteria 8475
126 Ga0439463_000270 3300042016 Bacteria 14288
127 Ga0466957_0062334 3300044842 Bacteria 2290
128 Ga0466958_0112515 3300045836 Bacteria 1700
129 Ga0466967_0006895 3300045976 Bacteria 8114
130 Ga0495592_0012400 3300046454 Bacteria 6473
131 Ga0495603_0000293 3300046455 Bacteria 26615
132 Ga0495603_0006667 3300046455 Bacteria 6929
133 Ga0495590_0030137 3300046457 Bacteria 1901
134 Ga0495591_000713 3300046458 Bacteria 24121
135 Ga0495629_0001352 3300046459 Bacteria 19326
136 Ga0495629_0004568 3300046459 Bacteria 10359
137 Ga0495629_0041334 3300046459 Bacteria 3244
138 Ga0495629_0079168 3300046459 Bacteria 2295
139 Ga0495638_0033133 3300046460 Bacteria 3305
140 Ga0495651_0019062 3300046462 Bacteria 5316
141 Ga0495653_0045125 3300046463 Bacteria 3418
142 Ga0495653_0053326 3300046463 Bacteria 3094
143 Ga0495605_0002796 3300046474 Bacteria 10606
144 Ga0495662_0027511 3300046476 Bacteria 2747
145 Ga0495664_0006932 3300046477 Bacteria 6272
146 Ga0495584_0003000 3300046491 Bacteria 9364
147 Ga0495585_0010919 3300046492 Bacteria 5397
148 Ga0495585_0037327 3300046492 Bacteria 2737
149 Ga0495585_0076577 3300046492 Bacteria 1817
150 Ga0495594_0038337 3300046499 Bacteria 2616
151 Ga0495594_0056673 3300046499 Bacteria 2163
152 Ga0495596_0000394 3300046500 Bacteria 27818
153 Ga0495606_0010161 3300046507 Bacteria 7851
154 Ga0495608_0001033 3300046511 Bacteria 19551
155 Ga0495610_0005801 3300046512 Bacteria 8686
156 Ga0495616_0001552 3300046513 Bacteria 15832
157 Ga0495618_0004886 3300046514 Bacteria 8190
158 Ga0495632_0003372 3300046519 Bacteria 11378
159 Ga0495643_0039112 3300046522 Bacteria 2595
160 Ga0495648_0068406 3300046524 Bacteria 2071
161 Ga0495648_0069866 3300046524 Bacteria 2042
162 Ga0495666_0006827 3300046526 Bacteria 5732
163 Ga0495654_0000832 3300046530 Bacteria 23418
164 Ga0495665_0049604 3300046531 Bacteria 2225
165 Ga0495640_0009814 3300046533 Bacteria 7431
166 Ga0495587_0005171 3300046536 Bacteria 8524
167 Ga0495622_0000079 3300046557 Bacteria 86143
168 Ga0495622_0000929 3300046557 Bacteria 15843
169 Ga0495667_0008167 3300046559 Bacteria 7105
170 Ga0495668_0000128 3300046616 Bacteria 113090
171 Ga0495668_0000945 3300046616 Bacteria 32307
172 Ga0495634_0006799 3300046642 Bacteria 8658
173 Ga0495611_0003125 3300046648 Bacteria 7346
174 Ga0495635_0007001 3300046663 Bacteria 7876
175 Ga0495661_0005652 3300046665 Bacteria 8863
176 Ga0495588_0038763 3300046674 Bacteria 2425
177 Ga0495623_0066277 3300046679 Bacteria 2256
178 Ga0495646_0008646 3300046680 Bacteria 6469
179 Ga0495613_0000824 3300046689 Bacteria 24009
180 Ga0495613_0011451 3300046689 Bacteria 6594
181 Ga0495671_0007199 3300046692 Bacteria 6362
182 Ga0495589_0024159 3300046794 Bacteria 3089
183 Ga0495600_0007191 3300046809 Bacteria 6797
184 Ga0495660_0004609 3300046810 Bacteria 8315
185 Ga0495636_0020956 3300047318 Bacteria 2636
186 Ga0495672_0005105 3300047320 Bacteria 10479
187 Ga0495676_0000004 3300047321 Bacteria 313696
188 Ga0495676_0003537 3300047321 Bacteria 14158
189 Ga0495676_0005426 3300047321 Bacteria 11697
190 Ga0495676_0006052 3300047321 Bacteria 11119
191 Ga0495676_0065842 3300047321 Bacteria 2811
192 Ga0495680_0032716 3300047322 Bacteria 4218
193 Ga0495683_0022141 3300047323 Bacteria 3269
194 Ga0495683_0064817 3300047323 Bacteria 1804
195 Ga0495687_006629 3300047443 Bacteria 7041
196 Ga0495675_0005621 3300047444 Bacteria 7653
197 Ga0495679_000015 3300047446 Bacteria 287256
198 Ga0495673_0004366 3300047469 Bacteria 8874
199 Ga0495673_0010694 3300047469 Bacteria 4973
200 Ga0495681_0032522 3300047470 Bacteria 2625
201 Ga0495686_0020047 3300047472 Bacteria 4461
202 Ga0495593_0009844 3300047673 Bacteria 5546
203 Ga0495602_0009647 3300048088 Bacteria 10030
204 Ga0495614_0006971 3300048089 Bacteria 5047
205 Ga0495614_0012851 3300048089 Bacteria 3672
206 Ga0495614_0020934 3300048089 Bacteria 2827
207 Ga0495626_0000012 3300048091 Bacteria 258483
208 Ga0496102_0015989 3300048905 Bacteria 6550
209 Ga0496116_0004855 3300048919 Bacteria 12682
210 Ga0496117_0003148 3300048920 Bacteria 19681
211 Ga0496117_0009009 3300048920 Bacteria 9389
212 Ga0496117_0044464 3300048920 Bacteria 3217
213 Ga0496118_0000198 3300048921 Bacteria 105857
214 Ga0496118_0095790 3300048921 Bacteria 2025
215 Ga0496121_0007915 3300048924 Bacteria 12711
216 Ga0496122_0010180 3300048925 Bacteria 9744
217 Ga0496125_0002121 3300048928 Bacteria 26658
218 Ga0496125_0065047 3300048928 Bacteria 2892
219 Ga0496125_0084671 3300048928 Bacteria 2406
220 Ga0495678_000949 3300049459 Bacteria 25148
221 Ga0495682_0000222 3300049460 Bacteria 44506
222 Ga0495682_0000276 3300049460 Bacteria 40134
223 Ga0501038_0070325 3300049574 Bacteria 2972
224 nmdc:mga07m45_31336_c1 3300050496 Bacteria 2947
225 nmdc:mga07m45_42830_c1 3300050496 Bacteria 2538
226 nmdc:mga07m45_57250_c1 3300050496 Bacteria 2204
227 2599970230 2599185307 Bacteria 6194719
228 2501080001 2501025502 Bacteria 9641094
229 2511087887 2510917013 Bacteria 9951648
230 2511267702 2511231006 Bacteria 6794709
231 2513554764 2513237082 Bacteria 8640282
232 2513562063 2513237083 Bacteria 8410967
233 2554813714 2554235132 Bacteria 6772433
234 2555667326 2554235341 Bacteria 6867980
235 2558911505 2558860112 Bacteria 9931328
236 2558913244 2558860112 Bacteria 9931328
237 2558914508 2558860112 Bacteria 9931328
238 2566991995 2565956761 Bacteria 6601618
239 2566996710 2565956761 Bacteria 6601618
240 2597032430 2596583598 Bacteria 5251611
241 2597855566 2597489887 Bacteria 6666321
242 2599356549 2599185160 Bacteria 6844013
243 2599363421 2599185161 Bacteria 6960462
244 2599369627 2599185162 Bacteria 6957254
245 2599376530 2599185163 Bacteria 6995158
246 2599381654 2599185164 Bacteria 6841688
247 2599388202 2599185165 Bacteria 6843250
248 2599395274 2599185166 Bacteria 6959206
249 2599407039 2599185168 Bacteria 6997636
250 2599444322 2599185178 Bacteria 5365746
251 2599463382 2599185181 Bacteria 6844519
252 2599469268 2599185182 Bacteria 6883168
253 2599485468 2599185185 Bacteria 6652270
254 2599492399 2599185186 Bacteria 6831633
255 2599736811 2599185239 Bacteria 8686614
256 2599744883 2599185240 Bacteria 7968121
257 2600205753 2599185355 Bacteria 7968906
258 2600216011 2599185356 Bacteria 6843884
259 2601776178 2600255313 Bacteria 6842543
260 2608381123 2606217733 Bacteria 6360972
261 2623501050 2622736605 Bacteria 4992138
262 2643761871 2643221548 Bacteria 8053412
263 2643824629 2643221561 Bacteria 4984412
264 2643826500 2643221561 Bacteria 4984412
265 2644460702 2643221682 Bacteria 6743283
266 2644535534 2643221696 Bacteria 5431823
267 2644535881 2643221696 Bacteria 5431823
268 2671100061 2667528171 Bacteria 6900659
269 2676743012 2675903129 Bacteria 7964495
270 2743734983 2740892503 Bacteria 6855563
271 2774396944 2773857762 Bacteria 5971770
272 2793979237 2791355406 Bacteria 11364898
273 2804849190 2802429296 Bacteria 7227771
274 2812352837 2811994878 Bacteria 5992952
275 2812370978 2811994881 Bacteria 6298475
276 2812478242 2811994917 Bacteria 7761064
277 2816506793 2816332139 Bacteria 9138787
278 2819631336 2818991452 Bacteria 8442785
279 2819699860 2818991463 Bacteria 7948711
280 2819705123 2818991464 Bacteria 6907494
281 2842325920 2842324504 Bacteria 9364110
282 2842350198 2842348783 Bacteria 9002918
283 2842454579 2842454564 Bacteria 8730687
284 2844667804 2844665904 Bacteria 6817974
285 2862576321 2862574272 Bacteria 10567477
286 2862582691 2862574272 Bacteria 10567477
287 2863427348 2863421361 Bacteria 7300805
288 2866552107 2866552031 Bacteria 5824618
289 2866552138 2866552031 Bacteria 5824618
290 2866553990 2866552031 Bacteria 5824618
291 2870070817 2870068957 Bacteria 8925310
292 2870784613 2870782633 Bacteria 9624083
293 2870789967 2870782633 Bacteria 9624083
294 2883090407 2883087390 Bacteria 9532701
295 2885268531 2885266251 Bacteria 4796748
296 2900580927 2900577576 Bacteria 5438534
297 2904536505 2904535858 Bacteria 6308016
298 2904538606 2904535858 Bacteria 6308016
299 2904569968 2904564687 Bacteria 7609577
300 2904576121 2904571731 Bacteria 7608790
301 2916701000 2916699645 Bacteria 3568996
302 2917071077 2917070673 Bacteria 6868303
303 2922558441 2922554459 Bacteria 6683962
304 2922559336 2922554459 Bacteria 6683962
305 2923153978 2923153595 Bacteria 6870622
306 2923525085 2923519811 Bacteria 6298479
307 2928063195 2928058823 Bacteria 5520022
308 2928162841 2928157003 Bacteria 7522202
309 2928169513 2928163908 Bacteria 7561269
310 2928171531 2928170801 Bacteria 8785406
311 2928542532 2928536128 Bacteria 7657547
312 2935358905 2935353572 Unclassified 6955622
313 2966600073 2966598605 Bacteria 7676064
314 2981996966 2981990288 Bacteria 7590678
315 2990089294 2990088156 Bacteria 6657676
316 3006430871 3006425503 Bacteria 6491253
317 3007397993 3007395558 Bacteria 6755444
318 637317723 637000220 Bacteria 7074893
319 642420315 641736154 Bacteria 7689995
320 8003959630 8003955200 Bacteria 8601927
321 8004024179 8004021418 Bacteria 4313954
322 8015688227 8015687852 Bacteria 6613826
323 8018846921 8018845410 Bacteria 8933938
324 8020944879 8020938398 Bacteria 7472757
325 8020945443 8020945358 Bacteria 8467355
326 8020957084 8020953355 Bacteria 7439080
327 8021122060 8021120328 Bacteria 8782274
328 8025413873 8025413630 Bacteria 7014048
329 8039100065 8039098773 Bacteria 6602928
330 8047903441 8047893842 Bacteria 11723082
331 8048356697 8048356638 Bacteria 11044339
332 8055037845 8055034563 Bacteria 3562128
333 8056210418 8056207758 Bacteria 8639239
334 8056213029 8056207758 Bacteria 8639239
335 JGI24741J21665_1000083
336 JGI24740J21852_10000951
337 JGI25162J39368_1000129
338 JGI25154J39366_1005627
339 JGI25163J39215_1000688
340 JGI25164J39214_1000101
341 JGI25406J46586_10002734
342 JGI25165J46597_1000150
343 Ga0055539_1000062
344 Ga0055532_1000019
345 Ga0055525_1000275
346 Ga0055527_1001570
347 Ga0055535_1000014
348 Ga0055542_1000588
349 Ga0055542_1008206
350 Ga0055529_1000086
351 Ga0055536_1000232
352 Ga0055528_1004524
353 Ga0055530_10000390
354 Ga0055541_1000254
355 Ga0055541_1004733
356 Ga0070658_10035813
357 Ga0070683_100251233
358 Ga0070660_100000926
359 Ga0070661_100000054
360 Ga0070659_100000050
361 Ga0070659_100004271
362 Ga0070714_100097473
363 Ga0070713_100238264
364 Ga0070663_100000010
365 Ga0070663_100058500
366 Ga0070664_100000005
367 Ga0068857_100005116
368 Ga0068854_100000032
369 Ga0068856_100000054
370 Ga0068856_100277080
371 Ga0068852_100011302
372 Ga0068864_100012118
373 Ga0081539_10000162
374 Ga0075370_10012512
375 Ga0105250_10012021
376 Ga0105240_10028949
377 Ga0105240_10062821
378 Ga0105245_10172785
379 Ga0105243_10001328
380 Ga0105237_10091431
381 Ga0105238_10023122
382 Ga0157373_10006041
383 Ga0157371_10000103
384 Ga0157371_10006974
385 Ga0157370_10001099
386 Ga0157369_10075187
387 Ga0157372_10000151
388 Ga0182008_10003343
389 Ga0182006_1004418
390 Ga0182006_1011511
391 Ga0154015_1417986
392 Ga0209760_100244
393 Ga0209784_100003
394 Ga0209566_100002
395 Ga0209566_100229
396 Ga0209566_101350
397 Ga0209674_100008
398 Ga0209674_100346
399 Ga0209672_100014
400 Ga0209672_100023
401 Ga0209672_100788
402 Ga0209147_100002
403 Ga0209147_100177
404 Ga0209147_100194
405 Ga0209147_100257
406 Ga0209563_100004
407 Ga0209563_102767
408 Ga0207427_100014
409 Ga0209437_100016
410 Ga0209258_100002
411 Ga0209258_100134
412 Ga0209258_100183
413 Ga0209646_1000019
414 Ga0209026_1010544
415 Ga0209677_100009
416 Ga0209148_1000035
417 Ga0209148_1000193
418 Ga0209148_1001762
419 Ga0209759_1001051
420 Ga0209233_1000036
421 Ga0209455_1000076
422 Ga0209455_1000232
423 Ga0209673_1000140
424 Ga0209676_1000032
425 Ga0209564_1006713
426 Ga0209050_1000025
427 Ga0209051_1000039
428 Ga0209051_1000047
429 Ga0207647_10015859
430 Ga0207695_10005643
431 Ga0207695_10008215
432 Ga0207695_10020073
433 Ga0207671_10024446
434 Ga0207657_10001883
435 Ga0207649_10000087
436 Ga0207664_10134081
437 Ga0207690_10000047
438 Ga0207690_10005360
439 Ga0207709_10001633
440 Ga0207661_10163420
441 Ga0207679_10000020
442 Ga0207667_10183334
443 Ga0207640_10000017
444 Ga0207678_10000008
445 Ga0207678_10092477
446 Ga0207702_10000017
447 Ga0207674_10001770
448 Ga0207698_10026690
449 Ga0209371_1001185
450 Ga0268256_1001051
451 Ga0307408_100005180
452 Ga0307518_10001044
453 Ga0307416_100059943
454 Ga0307414_10175550
455 Ga0395900_0041367
456 Ga0395905_0152880
457 Ga0395901_0025432
458 Ga0436365_1557373
459 Ga0436361_0105554
460 Ga0439463_000270
461 Ga0466957_0062334
462 Ga0466958_0112515
463 Ga0466967_0006895
464 Ga0495592_0012400
465 Ga0495603_0000293
466 Ga0495603_0006667
467 Ga0495590_0030137
468 Ga0495591_000713
469 Ga0495629_0001352
470 Ga0495629_0004568
471 Ga0495629_0041334
472 Ga0495629_0079168
473 Ga0495638_0033133
474 Ga0495651_0019062
475 Ga0495653_0045125
476 Ga0495653_0053326
477 Ga0495605_0002796
478 Ga0495662_0027511
479 Ga0495664_0006932
480 Ga0495584_0003000
481 Ga0495585_0010919
482 Ga0495585_0037327
483 Ga0495585_0076577
484 Ga0495594_0038337
485 Ga0495594_0056673
486 Ga0495596_0000394
487 Ga0495606_0010161
488 Ga0495608_0001033
489 Ga0495610_0005801
490 Ga0495616_0001552
491 Ga0495618_0004886
492 Ga0495632_0003372
493 Ga0495643_0039112
494 Ga0495648_0068406
495 Ga0495648_0069866
496 Ga0495666_0006827
497 Ga0495654_0000832
498 Ga0495665_0049604
499 Ga0495640_0009814
500 Ga0495587_0005171
501 Ga0495622_0000079
502 Ga0495622_0000929
503 Ga0495667_0008167
504 Ga0495668_0000128
505 Ga0495668_0000945
506 Ga0495634_0006799
507 Ga0495611_0003125
508 Ga0495635_0007001
509 Ga0495661_0005652
510 Ga0495588_0038763
511 Ga0495623_0066277
512 Ga0495646_0008646
513 Ga0495613_0000824
514 Ga0495613_0011451
515 Ga0495671_0007199
516 Ga0495589_0024159
517 Ga0495600_0007191
518 Ga0495660_0004609
519 Ga0495636_0020956
520 Ga0495672_0005105
521 Ga0495676_0000004
522 Ga0495676_0003537
523 Ga0495676_0005426
524 Ga0495676_0006052
525 Ga0495676_0065842
526 Ga0495680_0032716
527 Ga0495683_0022141
528 Ga0495683_0064817
529 Ga0495687_006629
530 Ga0495675_0005621
531 Ga0495679_000015
532 Ga0495673_0004366
533 Ga0495673_0010694
534 Ga0495681_0032522
535 Ga0495686_0020047
536 Ga0495593_0009844
537 Ga0495602_0009647
538 Ga0495614_0006971
539 Ga0495614_0012851
540 Ga0495614_0020934
541 Ga0495626_0000012
542 Ga0496102_0015989
543 Ga0496116_0004855
544 Ga0496117_0003148
545 Ga0496117_0009009
546 Ga0496117_0044464
547 Ga0496118_0000198
548 Ga0496118_0095790
549 Ga0496121_0007915
550 Ga0496122_0010180
551 Ga0496125_0002121
552 Ga0496125_0065047
553 Ga0496125_0084671
554 Ga0495678_000949
555 Ga0495682_0000222
556 Ga0495682_0000276
557 Ga0501038_0070325
558 nmdc:mga07m45_31336_c1
559 nmdc:mga07m45_42830_c1
560 nmdc:mga07m45_57250_c1
561 2599970230
562 2501080001
563 2511087887
564 2511267702
565 2513554764
566 2513562063
567 2554813714
568 2555667326
569 2558911505
570 2558913244
571 2558914508
572 2566991995
573 2566996710
574 2597032430
575 2597855566
576 2599356549
577 2599363421
578 2599369627
579 2599376530
580 2599381654
581 2599388202
582 2599395274
583 2599407039
584 2599444322
585 2599463382
586 2599469268
587 2599485468
588 2599492399
589 2599736811
590 2599744883
591 2600205753
592 2600216011
593 2601776178
594 2608381123
595 2623501050
596 2643761871
597 2643824629
598 2643826500
599 2644460702
600 2644535534
601 2644535881
602 2671100061
603 2676743012
604 2743734983
605 2774396944
606 2793979237
607 2804849190
608 2812352837
609 2812370978
610 2812478242
611 2816506793
612 2819631336
613 2819699860
614 2819705123
615 2842325920
616 2842350198
617 2842454579
618 2844667804
619 2862576321
620 2862582691
621 2863427348
622 2866552107
623 2866552138
624 2866553990
625 2870070817
626 2870784613
627 2870789967
628 2883090407
629 2885268531
630 2900580927
631 2904536505
632 2904538606
633 2904569968
634 2904576121
635 2916701000
636 2917071077
637 2922558441
638 2922559336
639 2923153978
640 2923525085
641 2928063195
642 2928162841
643 2928169513
644 2928171531
645 2928542532
646 2935358905
647 2966600073
648 2981996966
649 2990089294
650 3006430871
651 3007397993
652 637317723
653 642420315
654 8003959630
655 8004024179
656 8015688227
657 8018846921
658 8020944879
659 8020945443
660 8020957084
661 8021122060
662 8025413873
663 8039100065
664 8047903441
665 8048356697
666 8055037845
667 8056210418
668 8056213029

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

11

222

0.94

PF07690

MFS_1

Major Facilitator Superfamily

248

453

0.85

PF07690

MFS_1

Major Facilitator Superfamily

16

256

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8041 20 426
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.8021 15 432
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8008 59 425
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.7966 15 432
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.7854 20 426
ID Description Score Start End Superfamily
af_P37643_22_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9601 20 233 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9529 19 228 1.20.1250.20
af_P37643_22_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9472 20 233 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9399 19 228 1.20.1250.20
af_P37643_245_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9258 242 423 1.20.1250.20
ID Description Score Start End GO Terms
AF-K0USN9-F1-model_v4 Major facilitator transporter 0.973 17 424 GO:0005886
GO:0022857
AF-A0A4S2R1F5-F1-model_v4 MFS transporter 0.9715 19 422 GO:0005886
GO:0022857
AF-A0A1H5W2P8-F1-model_v4 Major Facilitator Superfamily protein 0.9703 17 423 GO:0005886
GO:0022857
AF-A0A353ZXW9-F1-model_v4 MFS transporter 0.9703 16 230 GO:0005886
GO:0022857
AF-A0A1S7BE27-F1-model_v4 deleted 0.9692 15 424

Map