F412088

General Info

Members Datasets Scaffolds Average Seq Length
335 289 159 397

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100021267|Ga0070670_1000212672
Length 392
Sequence MTVHIPTTEEEAAAIVIDHTARREPLSIFGGNSRAGFGNASSCEVALSARGMTGIVAYNPGEMVMTARSGTPVAEIEAALAASQQMMAFEPMDHRPLMATSGVPTIGGVFAANVSGPRRIIAGAARDSLLGVRFVNGRGEIVKAGGRVMKNVTGLDLPKLMAGSHGTLGLLTEVTFRVPPRNQTERTLVISGLTDEGATAAMAAAMSLSVEVSGAAHLPVSVASTFRAAHWADQSATLLRLEGLSGSVAVRMDKLTAAMGSDESDSQTLWRTIRDAAPFADGTMRPVWRVSVAPSAGHRLVAALRLEVGVDAFYDWQGGLVWLRMEAEPDGALLRHHIAAVGGGHATLLRATPQARAENDAFEPQPKAVSLLSQRIKEKFDPAGIFNPGKMG

Samples

Sample ID Description Type Environment
1 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
2 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
3 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
8 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
9 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
10 2516143018 Ensifer sp. BR816 Isolate Nodule
11 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
12 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
13 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
14 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
15 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
16 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
17 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
18 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
19 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
20 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
21 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
22 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
23 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
24 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
25 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
26 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
27 2643221568 Rhizobium sp. Root564 Isolate Unclassified
28 2643221599 Rhizobium sp. Root708 Isolate Unclassified
29 2643221618 Ensifer sp. Root231 Isolate Unclassified
30 2643221626 Ensifer sp. Root31 Isolate Unclassified
31 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
32 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
33 2643221655 Ensifer sp. Root1252 Isolate Unclassified
34 2643221659 Ensifer sp. Root127 Isolate Unclassified
35 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
36 2643221698 Ensifer sp. Root142 Isolate Unclassified
37 2643221712 Ensifer sp. Root258 Isolate Unclassified
38 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
39 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
40 2718217882 Rhizobium sp. N741 Isolate Nodule
41 2718217927 Rhizobium sp. N324 Isolate Nodule
42 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
43 2718218009 Rhizobium sp. N561 Isolate Nodule
44 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
45 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
46 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
47 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
48 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
49 2718218363 Rhizobium sp. N113 Isolate Nodule
50 2718218365 Rhizobium sp. N731 Isolate Nodule
51 2718218366 Rhizobium sp. N621 Isolate Nodule
52 2718218423 Rhizobium sp. N941 Isolate Nodule
53 2721755514 Rhizobium sp. N6212 Isolate Nodule
54 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
55 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
56 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
57 2721755809 Rhizobium sp. N541 Isolate Nodule
58 2721755810 Rhizobium sp. N871 Isolate Nodule
59 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
60 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
61 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
62 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
63 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
64 2728369365 Rhizobium sp. N1341 Isolate Nodule
65 2728369397 Rhizobium sp. N1314 Isolate Nodule
66 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
67 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
68 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
69 2791355260 Rhizobium sp. L9 Isolate Nodule
70 2791355261 Rhizobium sp. J15 Isolate Nodule
71 2791355264 Rhizobium sp. S9 Isolate Nodule
72 2791355265 Rhizobium sp. H4 Isolate Nodule
73 2791355266 Rhizobium sp. L43 Isolate Nodule
74 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
75 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
76 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
77 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
78 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
79 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
80 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
81 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
82 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
83 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
84 2838048938 Rhizobium pisi 27/80 Isolate Nodule
85 2838061910 Rhizobium phaseoli L15 Isolate Nodule
86 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
87 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
88 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
89 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
90 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
91 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
92 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
93 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
94 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
95 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
96 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
97 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
98 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
99 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
100 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
101 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
102 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
103 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
104 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
105 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
106 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
107 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
108 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
109 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
110 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
111 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
112 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
113 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
114 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
115 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
116 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
117 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
118 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
119 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
120 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
121 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
122 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
123 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
124 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
125 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
126 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
127 2844163670 Ensifer sp. 1H6 Isolate Unclassified
128 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
129 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
130 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
131 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
132 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
133 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
134 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
135 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
136 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
137 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
138 2933599457 Rhizobium phaseoli M3 Isolate Nodule
139 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
140 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
141 2996887358 Rhizobium sp. R711 Isolate Nodule
142 2996893221 Rhizobium sp. R635 Isolate Nodule
143 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
144 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
145 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
146 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
147 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
148 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
149 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
150 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
151 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
152 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
153 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
154 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
155 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
156 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
157 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
158 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
159 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
160 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
161 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
162 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
163 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
164 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
165 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
166 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
167 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
168 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
169 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
170 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
171 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
172 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
173 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
174 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
175 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
176 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
177 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
178 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
179 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
180 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
181 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
182 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
183 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
184 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
185 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
186 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
187 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
188 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
189 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
190 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
191 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
192 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
193 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
194 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
195 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
196 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
197 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
198 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
199 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
200 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
201 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
202 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
203 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
204 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
205 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
206 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
207 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
208 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
209 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
210 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
211 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
212 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
213 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
214 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
215 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
216 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
217 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
218 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
219 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
220 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
221 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
222 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
223 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
224 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
225 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
226 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
227 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
228 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
229 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
230 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
231 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
232 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
233 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
234 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
235 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
236 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
237 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
238 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
239 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
240 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
241 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
242 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
243 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
244 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
245 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
246 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
247 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
248 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
249 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
250 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
251 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
252 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
253 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
254 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
255 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
256 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
257 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
258 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
259 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
260 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
261 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
262 8005258706 Rhizobium sp. R693 Isolate Nodule
263 8005275841 Rhizobium sp. N4311 Isolate Nodule
264 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
265 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
266 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
267 8005321885 Rhizobium sp. R72 Isolate Nodule
268 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
269 8005382845 Rhizobium sp. R634 Isolate Nodule
270 8005395548 Rhizobium sp. R339 Isolate Nodule
271 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
272 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
273 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
274 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
275 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
276 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
277 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
278 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
279 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
280 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
281 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
282 8018176218 Rhizobium sp. N122 Isolate Nodule
283 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
284 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
285 8024501048 Rhizobium sp. H4 Isolate Nodule
286 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
287 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
288 8056382006 Rhizobium croatiense 13T Isolate Nodule
289 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 47.46
Metatranscriptomes 0
Isolates 52.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.51
Nodule 38.21
Rhizoplane 2.39
Rhizosphere 21.19
Stem 0
Stem Tuber 0
Unclassified 19.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000177 3300002737 Bacteria 68786
2 JGI25152J39213_1001722 3300002773 Bacteria 8958
3 JGI25159J45721_1000489 3300002987 Bacteria 18119
4 JGI25151J46595_10001463 3300003187 Bacteria 16008
5 JGI25165J46597_1000555 3300003214 Bacteria 34009
6 JGI25153J46596_10035531 3300003215 Bacteria 1612
7 rootH1_10131762 3300003316 Bacteria 1664
8 rootH2_10027335 3300003320 Bacteria 10879
9 rootL2_10030010 3300003322 Bacteria 1937
10 rootH1_10167678 3300003323 Bacteria 1701
11 JGI25160J50197_1000046 3300003354 Bacteria 141352
12 JGI25160J50197_1007651 3300003354 Bacteria 4207
13 JGI25161J50226_1000031 3300003374 Bacteria 141352
14 JGI25161J50226_1000074 3300003374 Bacteria 85547
15 Ga0055526_1003962 3300003771 Bacteria 9132
16 Ga0055526_1008528 3300003771 Bacteria 5092
17 Ga0055524_1007417 3300003775 Bacteria 4657
18 Ga0055524_1007902 3300003775 Bacteria 4469
19 Ga0055536_1007330 3300003781 Bacteria 4959
20 Ga0055528_1000146 3300003790 Bacteria 57915
21 Ga0055528_1000636 3300003790 Bacteria 25725
22 Ga0055540_1008694 3300003792 Bacteria 3619
23 Ga0055531_10002864 3300003794 Bacteria 11242
24 Ga0055531_10009385 3300003794 Bacteria 5001
25 Ga0055543_1000188 3300004625 Bacteria 50290
26 Ga0055543_1000637 3300004625 Bacteria 18741
27 Ga0065165_1000336 3300005262 Bacteria 76934
28 Ga0065165_1004745 3300005262 Bacteria 8137
29 Ga0070670_100021267 3300005331 Bacteria 5582
30 Ga0070663_100243719 3300005455 Bacteria 1420
31 Ga0070665_100042135 3300005548 Bacteria 4589
32 Ga0070665_100219182 3300005548 Bacteria 1903
33 Ga0075370_10007956 3300006353 Bacteria 5432
34 Ga0079104_1000069 3300006946 Bacteria 153993
35 Ga0105240_10000278 3300009093 Bacteria 101540
36 Ga0105237_10005254 3300009545 Bacteria 14655
37 Ga0123341_1000175 3300009765 Bacteria 32159
38 Ga0105239_10005703 3300010375 Bacteria 14538
39 Ga0157370_10001488 3300013104 Bacteria 29012
40 Ga0182008_10009010 3300014497 Bacteria 5406
41 Ga0182007_10002129 3300015262 Bacteria 10107
42 Ga0214544_1000008 3300021320 Bacteria 326027
43 Ga0214542_1000010 3300021321 Bacteria 262816
44 Ga0214543_1000004 3300021327 Bacteria 527190
45 Ga0209436_102999 3300025208 Bacteria 4688
46 Ga0209437_100086 3300025233 Bacteria 254578
47 Ga0209129_1000123 3300025258 Bacteria 133661
48 Ga0209129_1000316 3300025258 Bacteria 42919
49 Ga0209233_1000350 3300025261 Bacteria 43454
50 Ga0209673_1000015 3300025273 Bacteria 530618
51 Ga0209673_1000091 3300025273 Bacteria 201875
52 Ga0209673_1005312 3300025273 Bacteria 6524
53 Ga0209130_1000002 3300025284 Bacteria 722648
54 Ga0209130_1000312 3300025284 Bacteria 57303
55 Ga0209676_1005383 3300025292 Bacteria 6716
56 Ga0209025_1001232 3300025294 Bacteria 35695
57 Ga0209025_1010611 3300025294 Bacteria 6216
58 Ga0209025_1012323 3300025294 Bacteria 5498
59 Ga0209564_1000845 3300025295 Bacteria 41202
60 Ga0209564_1006239 3300025295 Bacteria 6504
61 Ga0209564_1010376 3300025295 Bacteria 4298
62 Ga0209758_1000602 3300025297 Bacteria 55848
63 Ga0209758_1000877 3300025297 Bacteria 41329
64 Ga0209256_1000531 3300025299 Bacteria 55283
65 Ga0209256_1002589 3300025299 Bacteria 14402
66 Ga0207426_1000012 3300025302 Bacteria 730942
67 Ga0207426_1000013 3300025302 Bacteria 721897
68 Ga0207426_1013336 3300025302 Bacteria 3049
69 Ga0209051_1001972 3300025303 Bacteria 15771
70 Ga0209051_1007015 3300025303 Bacteria 6240
71 Ga0209257_1003961 3300025304 Bacteria 12012
72 Ga0207695_10000376 3300025913 Bacteria 101548
73 Ga0207671_10000732 3300025914 Bacteria 41620
74 Ga0207650_10014651 3300025925 Bacteria 5447
75 Ga0209281_1000192 3300027111 Bacteria 140252
76 Ga0268266_10184576 3300028379 Bacteria 1901
77 Ga0307515_10000154 3300028794 Bacteria 166582
78 Ga0268256_1002270 3300030500 Bacteria 10014
79 Ga0307513_10003801 3300031456 Bacteria 20347
80 Ga0439465_0001431 3300041413 Bacteria 7721
81 Ga0451787_639219 3300041441 Bacteria 2308
82 Ga0439449_0016677 3300042007 Bacteria 2759
83 Ga0439462_0028074 3300042015 Bacteria 1487
84 Ga0495638_0000299 3300046460 Bacteria 63971
85 Ga0495651_0047333 3300046462 Bacteria 3326
86 Ga0495605_0003759 3300046474 Bacteria 9007
87 Ga0495605_0061846 3300046474 Bacteria 1790
88 Ga0495662_0008422 3300046476 Bacteria 5072
89 Ga0495664_0020503 3300046477 Bacteria 3813
90 Ga0495585_0007803 3300046492 Bacteria 6515
91 Ga0495606_0102202 3300046507 Bacteria 1743
92 Ga0495606_0105405 3300046507 Bacteria 1709
93 Ga0495616_0003250 3300046513 Bacteria 10452
94 Ga0495620_0016982 3300046515 Bacteria 3639
95 Ga0495620_0018886 3300046515 Bacteria 3405
96 Ga0495631_0001213 3300046518 Bacteria 15912
97 Ga0495632_0008604 3300046519 Bacteria 6237
98 Ga0495643_0092551 3300046522 Bacteria 1558
99 Ga0495652_0044354 3300046529 Bacteria 3830
100 Ga0495609_0050104 3300046538 Bacteria 1862
101 Ga0495668_0004092 3300046616 Bacteria 10570
102 Ga0495668_0024644 3300046616 Bacteria 3422
103 Ga0495634_0180904 3300046642 Bacteria 1320
104 Ga0495625_0006175 3300046660 Bacteria 10731
105 Ga0495661_0049694 3300046665 Bacteria 2542
106 Ga0495661_0071833 3300046665 Bacteria 2021
107 Ga0495588_0032447 3300046674 Bacteria 2633
108 Ga0495657_0051702 3300046675 Bacteria 2758
109 Ga0495670_0057098 3300046691 Bacteria 1959
110 Ga0495604_0187678 3300047317 Bacteria 1442
111 Ga0495636_0041274 3300047318 Bacteria 1915
112 Ga0495672_0057390 3300047320 Bacteria 2261
113 Ga0495686_0000688 3300047472 Bacteria 45757
114 Ga0495686_0007812 3300047472 Bacteria 7956
115 Ga0495686_0064496 3300047472 Bacteria 2267
116 Ga0496101_0069479 3300048904 Bacteria 2577
117 Ga0496102_0062947 3300048905 Bacteria 3396
118 Ga0496103_0031252 3300048906 Bacteria 3243
119 Ga0496106_0136348 3300048909 Bacteria 1928
120 Ga0496106_0204201 3300048909 Bacteria 1573
121 Ga0496113_0062939 3300048916 Bacteria 2803
122 Ga0496116_0000080 3300048919 Bacteria 224530
123 Ga0496116_0010044 3300048919 Bacteria 7983
124 Ga0496117_0005953 3300048920 Bacteria 12570
125 Ga0496118_0002815 3300048921 Bacteria 22770
126 Ga0496119_0006169 3300048922 Bacteria 11213
127 Ga0496120_0007638 3300048923 Bacteria 8011
128 Ga0496121_0003240 3300048924 Bacteria 23396
129 Ga0496121_0009856 3300048924 Bacteria 10901
130 Ga0496121_0017839 3300048924 Bacteria 7208
131 Ga0496121_0026109 3300048924 Bacteria 5517
132 Ga0496122_0000009 3300048925 Bacteria 584024
133 Ga0496122_0013652 3300048925 Bacteria 7928
134 Ga0496123_0000020 3300048926 Bacteria 388748
135 Ga0496123_0005238 3300048926 Bacteria 13174
136 Ga0496123_0078329 3300048926 Bacteria 2025
137 Ga0496124_0000063 3300048927 Bacteria 229705
138 Ga0496124_0009725 3300048927 Bacteria 9842
139 Ga0496124_0042720 3300048927 Bacteria 3901
140 Ga0496124_0046716 3300048927 Bacteria 3706
141 Ga0496124_0276932 3300048927 Bacteria 1225
142 Ga0496126_0000094 3300048929 Bacteria 208184
143 Ga0501038_0023186 3300049574 Bacteria 5553
144 Ga0501043_0063379 3300049579 Bacteria 2903
145 Ga0501047_0083236 3300049581 Bacteria 3075
146 Ga0501047_0176146 3300049581 Bacteria 2006
147 Ga0501067_0102599 3300049583 Bacteria 1589
148 Ga0501073_0072528 3300049589 Bacteria 2398
149 Ga0501035_0165134 3300049822 Bacteria 1915
150 Ga0500569_001411 3300053109 Bacteria 4522
151 Ga0500572_024578 3300053111 Bacteria 1627
152 Ga0500594_0017369 3300053118 Bacteria 1761
153 Ga0500568_0002150 3300053139 Bacteria 11883
154 Ga0500590_000222 3300053148 Bacteria 17111
155 Ga0500616_0001019 3300053153 Bacteria 29833
156 Ga0500616_0001529 3300053153 Bacteria 21766
157 Ga0500634_0035468 3300053161 Bacteria 2717
158 Ga0500636_0000010 3300053177 Bacteria 145932
159 Ga0500636_0020026 3300053177 Bacteria 3957

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047318 Ga0495636_0041274 Ga0495636_0041274_32_1051 337
2 3300048927 Ga0496124_0276932 Ga0496124_0276932_22_1071 348
3 3300005331 Ga0070670_100021267 Ga0070670_1000212672 391
4 3300025925 Ga0207650_10014651 Ga0207650_100146514 391
5 iso_pu_bacteria 2821123053 2821123698 392
6 iso_pu_bacteria 2838736955 2838739271 392
7 iso_pu_bacteria 2841840854 2841843169 392
8 iso_pu_bacteria 2842140634 2842142951 392
9 iso_pu_bacteria 2857531043 2857531260 392
10 3300030500 Ga0268256_1002270 Ga0268256_100227011 393
11 iso_pu_bacteria 2600254933 2600374776 393
12 iso_pu_bacteria 2818991461 2819684642 393
13 iso_pu_bacteria 2841846520 2841847081 393
14 iso_pu_bacteria 2842124991 2842126890 393
15 iso_pu_bacteria 2919171160 2919173792 393
16 3300048927 Ga0496124_0000063 Ga0496124_0000063_62505_63698 394
17 iso_pu_bacteria 2585427633 2585994500 394
18 iso_pu_bacteria 2585427634 2585998947 394
19 iso_pu_bacteria 2643221659 2644333767 394
20 iso_pu_bacteria 2854896431 2854898350 394
21 iso_pu_bacteria 2854916844 2854919063 394
22 iso_pu_bacteria 2919171160 2919172004 394
23 iso_pu_bacteria 2933016740 2933019037 394
24 iso_pu_bacteria 2989771324 2989774025 394
25 iso_pu_bacteria 3003930520 3003932156 394
26 iso_pu_bacteria 8056875544 8056879200 394
27 3300005548 Ga0070665_100042135 Ga0070665_1000421354 395
28 3300006946 Ga0079104_1000069 Ga0079104_100006988 395
29 3300027111 Ga0209281_1000192 Ga0209281_100019228 395
30 3300048924 Ga0496121_0009856 Ga0496121_0009856_8975_10177 395
31 3300048927 Ga0496124_0042720 Ga0496124_0042720_95_1297 395
32 iso_pu_bacteria 2509276033 2509443912 395
33 iso_pu_bacteria 2510917022 2511136226 395
34 iso_pu_bacteria 2513237084 2513571131 395
35 iso_pu_bacteria 2513237088 2513596784 395
36 iso_pu_bacteria 2513237093 2513632224 395
37 iso_pu_bacteria 2513237144 2513910424 395
38 iso_pu_bacteria 2513237146 2513928376 395
39 iso_pu_bacteria 2513237162 2514020947 395
40 iso_pu_bacteria 2515075009 2515110474 395
41 iso_pu_bacteria 2517287029 2517409591 395
42 iso_pu_bacteria 2582581299 2585229047 395
43 iso_pu_bacteria 2582581304 2585259516 395
44 iso_pu_bacteria 2582581307 2585275389 395
45 iso_pu_bacteria 2582581308 2585282242 395
46 iso_pu_bacteria 2585427527 2585536560 395
47 iso_pu_bacteria 2585427530 2585557038 395
48 iso_pu_bacteria 2585427531 2585560168 395
49 iso_pu_bacteria 2585427608 2585901562 395
50 iso_pu_bacteria 2585427609 2585905650 395
51 iso_pu_bacteria 2585428125 2587979234 395
52 iso_pu_bacteria 2599185170 2599419110 395
53 iso_pu_bacteria 2615840626 2616306265 395
54 iso_pu_bacteria 2643221599 2644007410 395
55 iso_pu_bacteria 2643221634 2644190661 395
56 iso_pu_bacteria 2643221643 2644241483 395
57 iso_pu_bacteria 2718217882 2719179639 395
58 iso_pu_bacteria 2718217927 2719384251 395
59 iso_pu_bacteria 2718217997 2719663985 395
60 iso_pu_bacteria 2718218009 2719730309 395
61 iso_pu_bacteria 2718218199 2720490404 395
62 iso_pu_bacteria 2718218232 2720611782 395
63 iso_pu_bacteria 2718218233 2720618639 395
64 iso_pu_bacteria 2718218235 2720630038 395
65 iso_pu_bacteria 2718218269 2720773733 395
66 iso_pu_bacteria 2718218363 2721145732 395
67 iso_pu_bacteria 2718218365 2721157264 395
68 iso_pu_bacteria 2718218366 2721162611 395
69 iso_pu_bacteria 2718218423 2721397965 395
70 iso_pu_bacteria 2721755514 2722838781 395
71 iso_pu_bacteria 2721755556 2723025403 395
72 iso_pu_bacteria 2721755684 2723558986 395
73 iso_pu_bacteria 2721755685 2723565593 395
74 iso_pu_bacteria 2721755809 2724036775 395
75 iso_pu_bacteria 2721755810 2724043065 395
76 iso_pu_bacteria 2721755819 2724088340 395
77 iso_pu_bacteria 2721755822 2724102858 395
78 iso_pu_bacteria 2721755823 2724108725 395
79 iso_pu_bacteria 2724679232 2725950175 395
80 iso_pu_bacteria 2728369352 2730106339 395
81 iso_pu_bacteria 2728369365 2730162876 395
82 iso_pu_bacteria 2728369397 2730296896 395
83 iso_pu_bacteria 2775507266 2778174230 395
84 iso_pu_bacteria 2791355259 2793315354 395
85 iso_pu_bacteria 2791355260 2793320215 395
86 iso_pu_bacteria 2791355261 2793326081 395
87 iso_pu_bacteria 2791355264 2793350812 395
88 iso_pu_bacteria 2791355265 2793353310 395
89 iso_pu_bacteria 2791355266 2793362693 395
90 iso_pu_bacteria 2802429605 2805927515 395
91 iso_pu_bacteria 2802429606 2805932299 395
92 iso_pu_bacteria 2818991448 2819608348 395
93 iso_pu_bacteria 2818991453 2819643572 395
94 iso_pu_bacteria 2838016132 2838022162 395
95 iso_pu_bacteria 2838022645 2838024575 395
96 iso_pu_bacteria 2838035591 2838037203 395
97 iso_pu_bacteria 2838048938 2838051405 395
98 iso_pu_bacteria 2838061910 2838066650 395
99 iso_pu_bacteria 2838068647 2838073703 395
100 iso_pu_bacteria 2838661181 2838663609 395
101 iso_pu_bacteria 2838668709 2838672323 395
102 iso_pu_bacteria 2838680041 2838680665 395
103 iso_pu_bacteria 2838694306 2838695302 395
104 iso_pu_bacteria 2838701080 2838703934 395
105 iso_pu_bacteria 2838707686 2838708678 395
106 iso_pu_bacteria 2842077413 2842080087 395
107 iso_pu_bacteria 2842118031 2842120707 395
108 iso_pu_bacteria 2842146304 2842148274 395
109 iso_pu_bacteria 2842192696 2842192972 395
110 iso_pu_bacteria 2842198810 2842200320 395
111 iso_pu_bacteria 2842205361 2842206859 395
112 iso_pu_bacteria 2842237096 2842238090 395
113 iso_pu_bacteria 2842250916 2842253339 395
114 iso_pu_bacteria 2842264693 2842267371 395
115 iso_pu_bacteria 2842278818 2842280448 395
116 iso_pu_bacteria 2842291075 2842293747 395
117 iso_pu_bacteria 2842311132 2842312553 395
118 iso_pu_bacteria 2842370503 2842371128 395
119 iso_pu_bacteria 2842377471 2842380144 395
120 iso_pu_bacteria 2842384541 2842387215 395
121 iso_pu_bacteria 2842395702 2842401239 395
122 iso_pu_bacteria 2842402390 2842406742 395
123 iso_pu_bacteria 2842409023 2842413762 395
124 iso_pu_bacteria 2842415677 2842420276 395
125 iso_pu_bacteria 2842422224 2842427151 395
126 iso_pu_bacteria 2842428310 2842431377 395
127 iso_pu_bacteria 2842434925 2842437712 395
128 iso_pu_bacteria 2842441272 2842444527 395
129 iso_pu_bacteria 2842447887 2842450274 395
130 iso_pu_bacteria 2842462802 2842465645 395
131 iso_pu_bacteria 2842469257 2842472455 395
132 iso_pu_bacteria 2842482326 2842482409 395
133 iso_pu_bacteria 2842489311 2842492389 395
134 iso_pu_bacteria 2842495871 2842501948 395
135 iso_pu_bacteria 2933599457 2933604131 395
136 iso_pu_bacteria 2935894831 2935895825 395
137 iso_pu_bacteria 2996887358 2996892119 395
138 iso_pu_bacteria 2996893221 2996893527 395
139 iso_pu_bacteria 3005452660 3005452897 395
140 iso_pu_bacteria 639633055 639646746 395
141 iso_pu_bacteria 8005258706 8005263554 395
142 iso_pu_bacteria 8005275841 8005278965 395
143 iso_pu_bacteria 8005282627 8005283651 395
144 iso_pu_bacteria 8005289223 8005291011 395
145 iso_pu_bacteria 8005301065 8005303919 395
146 iso_pu_bacteria 8005321885 8005326646 395
147 iso_pu_bacteria 8005376324 8005377350 395
148 iso_pu_bacteria 8005382845 8005387220 395
149 iso_pu_bacteria 8005395548 8005401979 395
150 iso_pu_bacteria 8005430974 8005433003 395
151 iso_pu_bacteria 8005460587 8005461113 395
152 iso_pu_bacteria 8005497431 8005498727 395
153 iso_pu_bacteria 8005619151 8005619922 395
154 iso_pu_bacteria 8005626139 8005628519 395
155 iso_pu_bacteria 8005645114 8005650205 395
156 iso_pu_bacteria 8005668836 8005670138 395
157 iso_pu_bacteria 8005682033 8005685059 395
158 iso_pu_bacteria 8005688590 8005690346 395
159 iso_pu_bacteria 8005695170 8005700303 395
160 iso_pu_bacteria 8018163183 8018167817 395
161 iso_pu_bacteria 8018176218 8018180242 395
162 iso_pu_bacteria 8024479707 8024480370 395
163 iso_pu_bacteria 8024501048 8024503607 395
164 iso_pu_bacteria 8046767195 8046769934 395
165 iso_pu_bacteria 8056382006 8056386026 395
166 3300003215 JGI25153J46596_10035531 JGI25153J46596_100355311 396
167 3300003794 Ga0055531_10002864 Ga0055531_100028648 396
168 3300003794 Ga0055531_10009385 Ga0055531_100093851 396
169 3300025292 Ga0209676_1005383 Ga0209676_10053832 396
170 3300025297 Ga0209758_1000602 Ga0209758_100060221 396
171 3300025304 Ga0209257_1003961 Ga0209257_10039618 396
172 3300048925 Ga0496122_0000009 Ga0496122_0000009_455018_456217 396
173 3300048926 Ga0496123_0000020 Ga0496123_0000020_259576_260775 396
174 3300048927 Ga0496124_0046716 Ga0496124_0046716_2112_3311 396
175 3300049574 Ga0501038_0023186 Ga0501038_0023186_253_1443 396
176 3300049581 Ga0501047_0176146 Ga0501047_0176146_413_1603 396
177 3300049822 Ga0501035_0165134 Ga0501035_0165134_682_1872 396
178 iso_pu_bacteria 2516143018 2516208529 396
179 iso_pu_bacteria 2643221618 2644103116 396
180 iso_pu_bacteria 2643221626 2644151954 396
181 iso_pu_bacteria 2643221655 2644306043 396
182 iso_pu_bacteria 2643221659 2644330351 396
183 iso_pu_bacteria 2643221689 2644496667 396
184 iso_pu_bacteria 2643221698 2644542902 396
185 iso_pu_bacteria 2643221712 2644619006 396
186 iso_pu_bacteria 2657244999 2657681966 396
187 iso_pu_bacteria 2690316117 2692317188 396
188 iso_pu_bacteria 2791355094 2792638700 396
189 iso_pu_bacteria 2802429268 2804750984 396
190 iso_pu_bacteria 2844163670 2844170683 396
191 iso_pu_bacteria 2847417321 2847417742 396
192 iso_pu_bacteria 2848992105 2848992588 396
193 iso_pu_bacteria 2855872281 2855873143 396
194 iso_pu_bacteria 2899803654 2899804427 396
195 iso_pu_bacteria 2913295892 2913297911 396
196 iso_pu_bacteria 643692032 643824601 396
197 iso_pu_bacteria 8024486573 8024491368 396
198 iso_pu_bacteria 8054460903 8054461346 396
199 3300003781 Ga0055536_1007330 Ga0055536_10073302 397
200 3300048909 Ga0496106_0136348 Ga0496106_0136348_121_1317 397
201 3300053153 Ga0500616_0001019 Ga0500616_0001019_12033_13229 397
202 3300028794 Ga0307515_10000154 Ga0307515_1000015438 398
203 3300031456 Ga0307513_10003801 Ga0307513_1000380110 398
204 3300041413 Ga0439465_0001431 Ga0439465_0001431_215_1411 398
205 3300042007 Ga0439449_0016677 Ga0439449_0016677_682_1878 398
206 iso_pu_bacteria 2643221568 2643856313 398
207 3300002737 JGI25162J39368_1000177 JGI25162J39368_100017724 399
208 3300002773 JGI25152J39213_1001722 JGI25152J39213_10017223 399
209 3300002987 JGI25159J45721_1000489 JGI25159J45721_10004897 399
210 3300003187 JGI25151J46595_10001463 JGI25151J46595_1000146310 399
211 3300003214 JGI25165J46597_1000555 JGI25165J46597_100055523 399
212 3300003316 rootH1_10131762 rootH1_101317621 399
213 3300003320 rootH2_10027335 rootH2_1002733510 399
214 3300003322 rootL2_10030010 rootL2_100300102 399
215 3300003323 rootH1_10167678 rootH1_101676781 399
216 3300003354 JGI25160J50197_1000046 JGI25160J50197_100004649 399
217 3300003354 JGI25160J50197_1007651 JGI25160J50197_10076513 399
218 3300003374 JGI25161J50226_1000031 JGI25161J50226_100003149 399
219 3300003374 JGI25161J50226_1000074 JGI25161J50226_100007477 399
220 3300003771 Ga0055526_1003962 Ga0055526_10039627 399
221 3300003771 Ga0055526_1008528 Ga0055526_10085284 399
222 3300003775 Ga0055524_1007417 Ga0055524_10074172 399
223 3300003775 Ga0055524_1007902 Ga0055524_10079022 399
224 3300003790 Ga0055528_1000146 Ga0055528_100014639 399
225 3300003790 Ga0055528_1000636 Ga0055528_100063621 399
226 3300003792 Ga0055540_1008694 Ga0055540_10086942 399
227 3300004625 Ga0055543_1000188 Ga0055543_100018850 399
228 3300004625 Ga0055543_1000637 Ga0055543_100063716 399
229 3300005262 Ga0065165_1000336 Ga0065165_100033673 399
230 3300005262 Ga0065165_1004745 Ga0065165_10047454 399
231 3300005455 Ga0070663_100243719 Ga0070663_1002437191 399
232 3300005548 Ga0070665_100219182 Ga0070665_1002191822 399
233 3300006353 Ga0075370_10007956 Ga0075370_100079565 399
234 3300009093 Ga0105240_10000278 Ga0105240_1000027884 399
235 3300009545 Ga0105237_10005254 Ga0105237_100052542 399
236 3300009765 Ga0123341_1000175 Ga0123341_10001752 399
237 3300010375 Ga0105239_10005703 Ga0105239_1000570312 399
238 3300013104 Ga0157370_10001488 Ga0157370_1000148827 399
239 3300014497 Ga0182008_10009010 Ga0182008_100090107 399
240 3300015262 Ga0182007_10002129 Ga0182007_100021298 399
241 3300021320 Ga0214544_1000008 Ga0214544_1000008291 399
242 3300021321 Ga0214542_1000010 Ga0214542_1000010248 399
243 3300021327 Ga0214543_1000004 Ga0214543_1000004270 399
244 3300025208 Ga0209436_102999 Ga0209436_1029994 399
245 3300025233 Ga0209437_100086 Ga0209437_100086161 399
246 3300025258 Ga0209129_1000123 Ga0209129_1000123109 399
247 3300025258 Ga0209129_1000316 Ga0209129_100031620 399
248 3300025261 Ga0209233_1000350 Ga0209233_100035022 399
249 3300025273 Ga0209673_1000015 Ga0209673_1000015306 399
250 3300025273 Ga0209673_1000091 Ga0209673_1000091171 399
251 3300025273 Ga0209673_1005312 Ga0209673_10053124 399
252 3300025284 Ga0209130_1000002 Ga0209130_10000024 399
253 3300025284 Ga0209130_1000312 Ga0209130_100031250 399
254 3300025294 Ga0209025_1001232 Ga0209025_100123230 399
255 3300025294 Ga0209025_1010611 Ga0209025_10106116 399
256 3300025294 Ga0209025_1012323 Ga0209025_10123232 399
257 3300025295 Ga0209564_1000845 Ga0209564_100084527 399
258 3300025295 Ga0209564_1006239 Ga0209564_10062394 399
259 3300025295 Ga0209564_1010376 Ga0209564_10103762 399
260 3300025297 Ga0209758_1000877 Ga0209758_100087720 399
261 3300025299 Ga0209256_1000531 Ga0209256_100053144 399
262 3300025299 Ga0209256_1002589 Ga0209256_100258910 399
263 3300025302 Ga0207426_1000012 Ga0207426_100001250 399
264 3300025302 Ga0207426_1000013 Ga0207426_10000134 399
265 3300025302 Ga0207426_1013336 Ga0207426_10133362 399
266 3300025303 Ga0209051_1001972 Ga0209051_100197214 399
267 3300025303 Ga0209051_1007015 Ga0209051_10070152 399
268 3300025913 Ga0207695_10000376 Ga0207695_1000037684 399
269 3300025914 Ga0207671_10000732 Ga0207671_100007322 399
270 3300028379 Ga0268266_10184576 Ga0268266_101845762 399
271 3300041441 Ga0451787_639219 Ga0451787_639219_376_1575 399
272 3300042015 Ga0439462_0028074 Ga0439462_0028074_205_1404 399
273 3300046460 Ga0495638_0000299 Ga0495638_0000299_37466_38671 399
274 3300046462 Ga0495651_0047333 Ga0495651_0047333_922_2124 399
275 3300046474 Ga0495605_0003759 Ga0495605_0003759_998_2203 399
276 3300046474 Ga0495605_0061846 Ga0495605_0061846_290_1489 399
277 3300046476 Ga0495662_0008422 Ga0495662_0008422_3263_4465 399
278 3300046477 Ga0495664_0020503 Ga0495664_0020503_772_1974 399
279 3300046492 Ga0495585_0007803 Ga0495585_0007803_628_1833 399
280 3300046507 Ga0495606_0102202 Ga0495606_0102202_108_1310 399
281 3300046507 Ga0495606_0105405 Ga0495606_0105405_472_1674 399
282 3300046513 Ga0495616_0003250 Ga0495616_0003250_5488_6693 399
283 3300046515 Ga0495620_0016982 Ga0495620_0016982_1877_3082 399
284 3300046515 Ga0495620_0018886 Ga0495620_0018886_1452_2657 399
285 3300046518 Ga0495631_0001213 Ga0495631_0001213_10177_11382 399
286 3300046519 Ga0495632_0008604 Ga0495632_0008604_4509_5714 399
287 3300046522 Ga0495643_0092551 Ga0495643_0092551_166_1365 399
288 3300046529 Ga0495652_0044354 Ga0495652_0044354_999_2201 399
289 3300046538 Ga0495609_0050104 Ga0495609_0050104_187_1392 399
290 3300046616 Ga0495668_0004092 Ga0495668_0004092_1399_2604 399
291 3300046616 Ga0495668_0024644 Ga0495668_0024644_324_1529 399
292 3300046642 Ga0495634_0180904 Ga0495634_0180904_69_1271 399
293 3300046660 Ga0495625_0006175 Ga0495625_0006175_7792_8997 399
294 3300046665 Ga0495661_0049694 Ga0495661_0049694_821_2020 399
295 3300046665 Ga0495661_0071833 Ga0495661_0071833_639_1844 399
296 3300046674 Ga0495588_0032447 Ga0495588_0032447_1251_2453 399
297 3300046675 Ga0495657_0051702 Ga0495657_0051702_14_1216 399
298 3300046691 Ga0495670_0057098 Ga0495670_0057098_481_1686 399
299 3300047317 Ga0495604_0187678 Ga0495604_0187678_52_1254 399
300 3300047320 Ga0495672_0057390 Ga0495672_0057390_776_1981 399
301 3300047472 Ga0495686_0000688 Ga0495686_0000688_26742_27941 399
302 3300047472 Ga0495686_0007812 Ga0495686_0007812_3017_4216 399
303 3300047472 Ga0495686_0064496 Ga0495686_0064496_34_1239 399
304 3300048904 Ga0496101_0069479 Ga0496101_0069479_317_1516 399
305 3300048905 Ga0496102_0062947 Ga0496102_0062947_1626_2825 399
306 3300048906 Ga0496103_0031252 Ga0496103_0031252_1411_2610 399
307 3300048909 Ga0496106_0204201 Ga0496106_0204201_11_1213 399
308 3300048916 Ga0496113_0062939 Ga0496113_0062939_532_1731 399
309 3300048919 Ga0496116_0000080 Ga0496116_0000080_50907_52121 399
310 3300048919 Ga0496116_0010044 Ga0496116_0010044_5137_6336 399
311 3300048920 Ga0496117_0005953 Ga0496117_0005953_1555_2754 399
312 3300048921 Ga0496118_0002815 Ga0496118_0002815_19896_21095 399
313 3300048922 Ga0496119_0006169 Ga0496119_0006169_8339_9538 399
314 3300048923 Ga0496120_0007638 Ga0496120_0007638_5137_6336 399
315 3300048924 Ga0496121_0003240 Ga0496121_0003240_1676_2875 399
316 3300048924 Ga0496121_0017839 Ga0496121_0017839_5591_6793 399
317 3300048924 Ga0496121_0026109 Ga0496121_0026109_786_1988 399
318 3300048925 Ga0496122_0013652 Ga0496122_0013652_1678_2877 399
319 3300048926 Ga0496123_0005238 Ga0496123_0005238_10305_11504 399
320 3300048926 Ga0496123_0078329 Ga0496123_0078329_225_1439 399
321 3300048927 Ga0496124_0009725 Ga0496124_0009725_1676_2875 399
322 3300048929 Ga0496126_0000094 Ga0496126_0000094_1354_2568 399
323 3300049579 Ga0501043_0063379 Ga0501043_0063379_449_1654 399
324 3300049581 Ga0501047_0083236 Ga0501047_0083236_1561_2766 399
325 3300049583 Ga0501067_0102599 Ga0501067_0102599_170_1375 399
326 3300049589 Ga0501073_0072528 Ga0501073_0072528_108_1313 399
327 3300053109 Ga0500569_001411 Ga0500569_001411_432_1637 399
328 3300053111 Ga0500572_024578 Ga0500572_024578_197_1405 399
329 3300053118 Ga0500594_0017369 Ga0500594_0017369_183_1388 399
330 3300053139 Ga0500568_0002150 Ga0500568_0002150_406_1611 399
331 3300053148 Ga0500590_000222 Ga0500590_000222_7980_9182 399
332 3300053153 Ga0500616_0001529 Ga0500616_0001529_15904_17109 399
333 3300053161 Ga0500634_0035468 Ga0500634_0035468_61_1323 399
334 3300053177 Ga0500636_0000010 Ga0500636_0000010_60929_62134 399
335 3300053177 Ga0500636_0020026 Ga0500636_0020026_391_1599 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

2

145

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qh2-assembly1.cif.gz_F cryo-em structure of ldh-etfab complex from acetobacterium woodii 0.8111 3 396
3pm9-assembly1.cif.gz_A crystal structure of a putative dehydrogenase (rpa1076) from rhodopseudomonas palustris cga009 at 2.57 a resolution 0.8 3 396
7qh2-assembly1.cif.gz_F cryo-em structure of ldh-etfab complex from acetobacterium woodii 0.7998 3 396
8jds-assembly1.cif.gz_A crystal structure of mldhd in complex with pyruvate 0.7943 3 396
8jdt-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketobutanoic acid 0.7921 3 396
ID Description Score Start End Superfamily
af_P52073_9_189_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.904 13 184 3.30.465.10
af_Q5ADT6_76_298_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.883 3 184 3.30.465.10
af_A0A368ULS0_107_341_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.8802 3 183 3.30.465.10
af_Q55BQ4_102_322_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.8712 3 183 3.30.465.10
af_Q11061_15_234_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.8501 3 184 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A844AAP0-F1-model_v4 Glycolate oxidase subunit GlcE (EC 1.1.99.14) 0.9605 1 399 GO:0016491
GO:0071949
AF-A0A844AAP0-F1-model_v4 Glycolate oxidase subunit GlcE (EC 1.1.99.14) 0.9582 1 399 GO:0016491
GO:0071949
AF-A0A6P1WC40-F1-model_v4 deleted 0.958 1 399
AF-H4F1I8-F1-model_v4 FAD linked oxidase domain protein 0.9493 54 399 GO:0003824
GO:0071949
AF-A0A7W9RZW0-F1-model_v4 Glycolate oxidase FAD binding subunit 0.9439 1 399 GO:0003824
GO:0071949

Feature Viewer

pLDDT pTM Quality
84.71 0.85 High
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Predicted Structure (AlphaFold2)

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