F412385

General Info

Members Datasets Scaffolds Average Seq Length
335 257 234 301

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0177125|Ga0495668_0177125_110_1120
Length 336
Sequence MDYYLTGLLIQEYTMRGSEFSQLKAFAAIVEEGSFVRAAARLRVSPPSLSQSIRQLEARIGVRLLNRTTRSVSPTAAGDTLFARLAAAFGELDGAVADVQAGRDRPAGSLRINVSRVAAMRFIAPILGDFQRAYPEIALTVIVDDMLTDIVQGRFDAGIRLGERLHKDMVAVKLSEDLQMAAVAAPAYLEGRAIPRHPQDLHQHQCINFQWPGGGNIYRWEFSRGKRVLEIAVQGSLTVNDTELMLNAALGGAGVAYMIDYQVQPSIGAGRLVRFLEPWSPSFPGFFLYHPSSRHVPPALRAFIDFVRARTREEVTTPFEEGDAPQGFASLETMAN

Samples

Sample ID Description Type Environment
1 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
2 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
3 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
4 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
5 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
6 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
7 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
8 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
9 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
10 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
11 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
12 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
13 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
14 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
15 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
16 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
17 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
18 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
19 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
20 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
21 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
22 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
23 2636415599 Klebsiella variicola DX120E Isolate Unclassified
24 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
25 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
26 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
27 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
28 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
29 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
30 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
31 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
32 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
33 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
34 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
35 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
36 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
37 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
38 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
39 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
40 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
41 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
42 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
43 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
44 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
45 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
46 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
47 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
48 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
49 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
50 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
51 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
52 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
53 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
54 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
55 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
56 2904456579 Variovorax sp. 2002 Isolate Unclassified
57 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
58 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
59 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
60 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
61 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
62 2919150387 Rahnella aceris 1817 Isolate Unclassified
63 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
64 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
65 2927143783 Rahnella sp. 2050 Isolate Unclassified
66 2929520902 Variovorax beijingensis 502 Isolate Unclassified
67 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
68 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
69 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
70 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
71 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
72 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
73 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
74 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
75 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
76 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
77 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
78 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
79 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
80 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
81 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
82 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
83 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
84 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
85 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
86 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
87 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
88 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
89 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
90 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
91 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
92 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
93 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
94 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
95 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
96 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
97 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
98 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
99 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
100 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
101 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
102 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
103 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
104 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
105 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
106 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
107 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
108 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
109 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
110 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
111 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
112 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
113 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
114 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
115 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
116 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
117 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
118 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
119 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
120 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
121 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
122 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
123 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
124 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
125 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
126 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
127 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
128 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
129 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
130 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
131 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
132 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
133 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
134 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
135 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
136 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
137 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
138 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
139 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
140 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
141 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
142 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
143 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
144 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
145 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
146 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
147 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
148 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
149 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
150 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
151 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
152 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
153 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
154 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
155 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
156 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
157 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
158 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
159 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
160 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
161 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
162 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
163 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
164 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
165 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
166 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
172 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
183 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
184 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
185 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
186 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
187 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
188 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
189 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
190 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
191 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
192 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
193 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
194 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
195 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
196 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
197 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
198 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
199 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
200 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
201 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
202 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
203 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
204 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
205 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
206 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
207 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
208 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
209 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
210 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
211 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
212 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
213 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
214 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
215 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
216 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
217 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
218 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
219 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
220 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
221 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
222 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
223 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
224 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
225 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
226 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
227 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
228 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
229 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
230 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
231 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
232 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
233 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
234 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
235 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
236 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
237 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
238 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
239 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
240 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
241 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
242 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
243 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
244 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
245 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
246 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
247 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
248 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
249 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
250 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
251 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
252 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
253 8018221730 Enterobacter sp. CM29 Isolate Unclassified
254 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
255 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
256 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule
257 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.85
Metatranscriptomes 0
Isolates 30.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.03
Nodule 15.52
Rhizoplane 5.67
Rhizosphere 49.85
Stem 0
Stem Tuber 0
Unclassified 14.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006482 3300001979 Bacteria 4842
2 JGI24739J22299_10032531 3300001989 Bacteria 1793
3 JGI25162J39368_1000002 3300002737 Bacteria 663004
4 JGI25157J39369_1000162 3300002741 Bacteria 55941
5 JGI25163J39215_1000043 3300002771 Bacteria 55468
6 JGI25164J39214_1000066 3300002772 Bacteria 106367
7 rootH1_10132936 3300003316 Bacteria 1664
8 rootL2_10250428 3300003322 Bacteria 1853
9 Ga0055538_1000003 3300003751 Bacteria 663004
10 Ga0055539_1000003 3300003752 Bacteria 663004
11 Ga0055533_1000005 3300003756 Bacteria 663004
12 Ga0055525_1000005 3300003759 Bacteria 663004
13 Ga0055542_1001100 3300003762 Bacteria 16357
14 Ga0055540_1001147 3300003792 Bacteria 16507
15 Ga0055541_1000003 3300003841 Bacteria 663004
16 Ga0058692_1001201 3300003856 Bacteria 9924
17 Ga0065704_10003190 3300005289 Bacteria 4277
18 Ga0070668_100327520 3300005347 Bacteria 1291
19 Ga0070711_100489530 3300005439 Bacteria 1012
20 Ga0070662_100024210 3300005457 Bacteria 4180
21 Ga0070679_100321157 3300005530 Bacteria 1497
22 Ga0068853_100013877 3300005539 Bacteria 6586
23 Ga0068853_100032132 3300005539 Bacteria 4445
24 Ga0070672_100293648 3300005543 Bacteria 1377
25 Ga0070696_100044565 3300005546 Bacteria 3072
26 Ga0070665_100346971 3300005548 Bacteria 1489
27 Ga0068855_100000157 3300005563 Bacteria 86631
28 Ga0068855_100010874 3300005563 Bacteria 10985
29 Ga0068856_100037399 3300005614 Bacteria 4763
30 Ga0068856_100146302 3300005614 Bacteria 2371
31 Ga0068852_100018431 3300005616 Bacteria 5499
32 Ga0068852_100044821 3300005616 Bacteria 3760
33 Ga0070717_10156596 3300006028 Bacteria 1974
34 Ga0075365_10191284 3300006038 Bacteria 1432
35 Ga0075368_10002973 3300006042 Bacteria 5596
36 Ga0075364_10012560 3300006051 Bacteria 5187
37 Ga0075364_10155262 3300006051 Bacteria 1543
38 Ga0070712_100089181 3300006175 Unclassified 2255
39 Ga0070712_100358593 3300006175 Bacteria 1195
40 Ga0075367_10043097 3300006178 Bacteria 2643
41 Ga0075367_10103320 3300006178 Bacteria 1744
42 Ga0075369_10021271 3300006186 Bacteria 2663
43 Ga0075369_10062234 3300006186 Bacteria 1630
44 Ga0075366_10020130 3300006195 Bacteria 3868
45 Ga0079104_1002206 3300006946 Bacteria 10944
46 Ga0105251_10000002 3300009011 Bacteria 350843
47 Ga0105251_10000021 3300009011 Bacteria 137955
48 Ga0105251_10012045 3300009011 Bacteria 4908
49 Ga0105251_10027030 3300009011 Bacteria 2914
50 Ga0105251_10041835 3300009011 Bacteria 2228
51 Ga0105251_10042592 3300009011 Bacteria 2202
52 Ga0105244_10000407 3300009036 Bacteria 40132
53 Ga0105244_10006109 3300009036 Bacteria 7865
54 Ga0105244_10006547 3300009036 Bacteria 7514
55 Ga0105250_10000070 3300009092 Bacteria 96227
56 Ga0105250_10000616 3300009092 Bacteria 23145
57 Ga0105250_10001622 3300009092 Bacteria 12022
58 Ga0105250_10079726 3300009092 Bacteria 1327
59 Ga0105240_10002740 3300009093 Bacteria 27879
60 Ga0105240_10071251 3300009093 Bacteria 4299
61 Ga0105240_10184712 3300009093 Bacteria 2457
62 Ga0105240_10667499 3300009093 Bacteria 1138
63 Ga0105243_10244342 3300009148 Bacteria 1599
64 Ga0105241_10000002 3300009174 Bacteria 869480
65 Ga0105237_10011556 3300009545 Bacteria 9337
66 Ga0105237_10129930 3300009545 Bacteria 2514
67 Ga0105238_10019415 3300009551 Bacteria 6922
68 Ga0105238_10019608 3300009551 Bacteria 6886
69 Ga0105238_10037032 3300009551 Bacteria 4961
70 Ga0105238_10156168 3300009551 Bacteria 2257
71 Ga0099796_10010270 3300010159 Bacteria 2569
72 Ga0105239_10004392 3300010375 Bacteria 16881
73 Ga0105239_10022462 3300010375 Bacteria 6955
74 Ga0105239_10324962 3300010375 Bacteria 1735
75 Ga0105239_10380306 3300010375 Bacteria 1596
76 Ga0105246_10000013 3300011119 Bacteria 67142
77 Ga0157373_10000541 3300013100 Bacteria 29567
78 Ga0157373_10001081 3300013100 Bacteria 20989
79 Ga0157373_10019737 3300013100 Bacteria 4902
80 Ga0157371_10000092 3300013102 Bacteria 141282
81 Ga0157371_10003279 3300013102 Bacteria 14838
82 Ga0157370_10000596 3300013104 Bacteria 45119
83 Ga0157369_10005711 3300013105 Bacteria 14453
84 Ga0157369_10316793 3300013105 Bacteria 1622
85 Ga0163162_10747734 3300013306 Bacteria 1097
86 Ga0157372_10004147 3300013307 Bacteria 15519
87 Ga0157375_10068543 3300013308 Bacteria 3550
88 Ga0182008_10010022 3300014497 Bacteria 5089
89 Ga0182008_10045255 3300014497 Bacteria 2188
90 Ga0182006_1000144 3300015261 Bacteria 75603
91 Ga0182006_1016795 3300015261 Bacteria 3119
92 Ga0163161_10001859 3300017792 Bacteria 15413
93 Ga0213872_10000276 3300021361 Bacteria 43790
94 Ga0213872_10013761 3300021361 Bacteria 3786
95 Ga0213876_10000084 3300021384 Bacteria 107178
96 Ga0209760_100005 3300025207 Bacteria 238315
97 Ga0209784_100001 3300025224 Bacteria 3600592
98 Ga0209566_100001 3300025225 Bacteria 3600765
99 Ga0209674_100002 3300025226 Bacteria 3600592
100 Ga0209563_100002 3300025230 Bacteria 2045675
101 Ga0207427_100009 3300025231 Bacteria 663036
102 Ga0209437_100001 3300025233 Bacteria 2045675
103 Ga0209026_1000025 3300025250 Bacteria 352548
104 Ga0209677_100002 3300025253 Bacteria 2045675
105 Ga0209148_1000128 3300025254 Bacteria 179154
106 Ga0209759_1000121 3300025256 Bacteria 138469
107 Ga0209455_1000127 3300025272 Bacteria 162518
108 Ga0209758_1024095 3300025297 Bacteria 2724
109 Ga0209051_1001866 3300025303 Bacteria 16542
110 Ga0207696_1000038 3300025711 Bacteria 328221
111 Ga0207696_1000409 3300025711 Bacteria 40065
112 Ga0207696_1001983 3300025711 Bacteria 10382
113 Ga0207696_1009567 3300025711 Bacteria 3607
114 Ga0207696_1042363 3300025711 Bacteria 1327
115 Ga0207655_1000002 3300025728 Bacteria 1148694
116 Ga0207655_1000050 3300025728 Bacteria 294923
117 Ga0207655_1000218 3300025728 Bacteria 98543
118 Ga0207655_1000673 3300025728 Bacteria 40069
119 Ga0207655_1002788 3300025728 Bacteria 13581
120 Ga0207655_1014723 3300025728 Bacteria 4398
121 Ga0207713_1000002 3300025735 Bacteria 1061749
122 Ga0207713_1000003 3300025735 Bacteria 860698
123 Ga0207713_1000008 3300025735 Bacteria 553952
124 Ga0207713_1000191 3300025735 Bacteria 85634
125 Ga0207713_1005894 3300025735 Bacteria 7567
126 Ga0207713_1005935 3300025735 Bacteria 7537
127 Ga0207713_1037827 3300025735 Bacteria 2053
128 Ga0207647_10005839 3300025904 Bacteria 8976
129 Ga0207705_10073798 3300025909 Bacteria 2476
130 Ga0207654_10000005 3300025911 Bacteria 869492
131 Ga0207695_10000004 3300025913 Bacteria 1288665
132 Ga0207671_10051335 3300025914 Bacteria 3056
133 Ga0207693_10098206 3300025915 Bacteria 2296
134 Ga0207663_10107304 3300025916 Unclassified 1889
135 Ga0207694_10000015 3300025924 Bacteria 363898
136 Ga0207694_10069018 3300025924 Bacteria 2761
137 Ga0207700_10409504 3300025928 Bacteria 1189
138 Ga0207709_10204484 3300025935 Bacteria 1413
139 Ga0207667_10000160 3300025949 Bacteria 99695
140 Ga0207667_10006137 3300025949 Bacteria 14603
141 Ga0207651_10014032 3300025960 Bacteria 4612
142 Ga0207683_10064647 3300026121 Bacteria 3224
143 Ga0207698_10174956 3300026142 Bacteria 1894
144 Ga0207698_10367825 3300026142 Bacteria 1364
145 Ga0209281_1000003 3300027111 Bacteria 1260089
146 Ga0209371_1000017 3300027312 Bacteria 625776
147 Ga0209371_1001607 3300027312 Bacteria 14687
148 Ga0209813_10040527 3300027866 Bacteria 1416
149 Ga0268266_10265531 3300028379 Bacteria 1592
150 Ga0268256_1000036 3300030500 Bacteria 370250
151 Ga0268256_1001390 3300030500 Bacteria 14687
152 Ga0314311_1255236 3300030733 Bacteria 1820
153 Ga0316178_1059427 3300030735 Bacteria 2582
154 Ga0316183_1043820 3300030742 Bacteria 12516
155 Ga0316182_1255258 3300030745 Bacteria 1988
156 Ga0307513_10408378 3300031456 Bacteria 1091
157 Ga0307412_10093175 3300031911 Bacteria 2112
158 Ga0307411_10093043 3300032005 Bacteria 2110
159 Ga0307411_10172432 3300032005 Bacteria 1633
160 Ga0307510_10220237 3300033180 Bacteria 1410
161 Ga0395905_0158183 3300037471 Bacteria 2130
162 Ga0436365_0203066 3300039437 Bacteria 111457
163 Ga0436361_0522336 3300039447 Bacteria 4675
164 Ga0436361_0526559 3300039447 Bacteria 60778
165 Ga0439438_036500 3300041405 Bacteria 1288
166 Ga0451793_1777097 3300041452 Bacteria 1307
167 Ga0439431_0011826 3300041997 Bacteria 1999
168 Ga0439431_0072023 3300041997 Bacteria 922
169 Ga0450890_003202 3300042127 Bacteria 2185
170 Ga0450906_009705 3300042145 Bacteria 1829
171 Ga0439458_0056305 3300042157 Bacteria 977
172 Ga0439444_0028474 3300042437 Bacteria 1035
173 Ga0439464_0011013 3300042439 Bacteria 2391
174 Ga0439464_0031288 3300042439 Bacteria 1492
175 Ga0450918_004475 3300042531 Bacteria 2542
176 Ga0495629_0039769 3300046459 Bacteria 3309
177 Ga0495650_0000386 3300046471 Bacteria 75722
178 Ga0495650_0004396 3300046471 Bacteria 9686
179 Ga0495610_0068823 3300046512 Bacteria 1658
180 Ga0495643_0032508 3300046522 Bacteria 2896
181 Ga0495597_0001260 3300046542 Bacteria 18706
182 Ga0495597_0013789 3300046542 Bacteria 3864
183 Ga0495668_0177125 3300046616 Bacteria 1168
184 Ga0495588_0002391 3300046674 Bacteria 8031
185 Ga0495657_0027217 3300046675 Bacteria 4038
186 Ga0495600_0004782 3300046809 Bacteria 8126
187 Ga0495660_0000153 3300046810 Bacteria 74797
188 Ga0495660_0064648 3300046810 Bacteria 1955
189 Ga0495604_0031437 3300047317 Bacteria 4209
190 Ga0495636_0129863 3300047318 Unclassified 1120
191 Ga0495672_0063894 3300047320 Bacteria 2110
192 Ga0495672_0186224 3300047320 Bacteria 1048
193 Ga0495687_000273 3300047443 Bacteria 68368
194 Ga0495687_075803 3300047443 Bacteria 1333
195 Ga0495687_104341 3300047443 Bacteria 1056
196 Ga0496116_0000394 3300048919 Bacteria 63846
197 Ga0496117_0001290 3300048920 Bacteria 36931
198 Ga0496118_0000048 3300048921 Bacteria 253404
199 Ga0496118_0000491 3300048921 Bacteria 65587
200 Ga0496118_0019239 3300048921 Bacteria 6112
201 Ga0496118_0131321 3300048921 Bacteria 1608
202 Ga0496119_0079952 3300048922 Bacteria 1886
203 Ga0496119_0128361 3300048922 Bacteria 1385
204 Ga0496120_0030670 3300048923 Bacteria 3263
205 Ga0496122_0000571 3300048925 Bacteria 75468
206 Ga0496122_0000810 3300048925 Bacteria 59986
207 Ga0496122_0092587 3300048925 Bacteria 2054
208 Ga0496123_0000430 3300048926 Bacteria 75549
209 Ga0496123_0001426 3300048926 Bacteria 33426
210 Ga0496124_0000445 3300048927 Bacteria 72989
211 Ga0496124_0034467 3300048927 Bacteria 4442
212 Ga0496124_0122622 3300048927 Bacteria 2074
213 Ga0496125_0011442 3300048928 Bacteria 8873
214 Ga0496125_0088713 3300048928 Bacteria 2329
215 Ga0496126_0037023 3300048929 Bacteria 4557
216 Ga0496126_0069447 3300048929 Bacteria 3143
217 Ga0495682_0000968 3300049460 Bacteria 17277
218 Ga0501249_000542 3300049679 Bacteria 9082
219 Ga0501225_0004484 3300049705 Bacteria 4156
220 nmdc:mga00v17_14969_c1 3300050491 Bacteria 4344
221 nmdc:mga00v17_4678_c1 3300050491 Bacteria 7149
222 nmdc:mga0k408_11673_c1 3300050493 Bacteria 4788
223 nmdc:mga06z11_211293_c1 3300050494 Bacteria 1131
224 nmdc:mga04h51_48547_c1 3300050495 Bacteria 1415
225 nmdc:mga0sz30_11172_c1 3300050516 Bacteria 3460
226 nmdc:mga0sz30_38380_c2 3300050516 Bacteria 1058
227 Ga0500610_0021255 3300053079 Bacteria 3181
228 Ga0500595_001482 3300053119 Bacteria 12473
229 Ga0500655_006022 3300053133 Bacteria 2185
230 Ga0500568_0003665 3300053139 Bacteria 8444
231 Ga0500577_0005444 3300053142 Bacteria 3432
232 Ga0500590_009820 3300053148 Bacteria 4819
233 Ga0500604_0049712 3300053151 Bacteria 1290
234 Ga0500622_0009545 3300053156 Bacteria 5364

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025915 Ga0207693_10098206 Ga0207693_100982062 242
2 3300041405 Ga0439438_036500 Ga0439438_036500_470_1249 259
3 3300009011 Ga0105251_10000021 Ga0105251_1000002112 270
4 3300025735 Ga0207713_1000003 Ga0207713_1000003224 270
5 3300047443 Ga0495687_104341 Ga0495687_104341_12_824 270
6 3300046542 Ga0495597_0013789 Ga0495597_0013789_2289_3119 276
7 3300047443 Ga0495687_000273 Ga0495687_000273_46619_47449 276
8 iso_pu_bacteria 2885334103 2885337086 278
9 3300006051 Ga0075364_10012560 Ga0075364_100125604 279
10 3300050491 nmdc:mga00v17_14969_c1 nmdc:mga00v17_14969_c1_1681_2592 279
11 3300048925 Ga0496122_0092587 Ga0496122_0092587_1182_2042 286
12 iso_pu_bacteria 2554235234 2555257616 291
13 iso_pu_bacteria 2919108558 2919108814 291
14 iso_pu_bacteria 2971820967 2971823383 291
15 iso_pu_bacteria 2904456579 2904461485 292
16 iso_pu_bacteria 2508501127 2509143291 293
17 iso_pu_bacteria 2511231035 2511433104 293
18 iso_pu_bacteria 2599185169 2599409398 293
19 iso_pu_bacteria 2600255287 2601643741 293
20 iso_pu_bacteria 2600255291 2601663565 293
21 iso_pu_bacteria 2600255298 2601696554 293
22 iso_pu_bacteria 2600255299 2601701197 293
23 iso_pu_bacteria 2600255303 2601721578 293
24 iso_pu_bacteria 2600255307 2601739926 293
25 iso_pu_bacteria 2600255309 2601750415 293
26 iso_pu_bacteria 2600255392 2602017668 293
27 iso_pu_bacteria 2602042052 2603660951 293
28 iso_pu_bacteria 2602042053 2603666225 293
29 iso_pu_bacteria 2602042066 2603697915 293
30 iso_pu_bacteria 2602042111 2603877038 293
31 iso_pu_bacteria 2603880184 2606070658 293
32 iso_pu_bacteria 2636415599 2637225294 293
33 iso_pu_bacteria 2667528173 2671107391 293
34 iso_pu_bacteria 2675903046 2676406543 293
35 iso_pu_bacteria 2806310673 2807176780 293
36 iso_pu_bacteria 2841734538 2841739211 293
37 iso_pu_bacteria 2856342000 2856344964 293
38 iso_pu_bacteria 2871474448 2871480431 293
39 iso_pu_bacteria 2874123672 2874130614 293
40 iso_pu_bacteria 2874168670 2874169875 293
41 iso_pu_bacteria 2878788777 2878790750 293
42 iso_pu_bacteria 2881609920 2881612095 293
43 iso_pu_bacteria 2885305155 2885309447 293
44 iso_pu_bacteria 2885312484 2885317976 293
45 iso_pu_bacteria 2888343758 2888346835 293
46 iso_pu_bacteria 2888373701 2888374793 293
47 iso_pu_bacteria 2904474040 2904476339 293
48 iso_pu_bacteria 2919150387 2919152508 293
49 iso_pu_bacteria 2924754689 2924757185 293
50 iso_pu_bacteria 2927143783 2927145177 293
51 iso_pu_bacteria 2937836603 2937839400 293
52 iso_pu_bacteria 2939573065 2939573337 293
53 iso_pu_bacteria 2958071322 2958078184 293
54 iso_pu_bacteria 2969079654 2969082262 293
55 iso_pu_bacteria 2970524798 2970528605 293
56 iso_pu_bacteria 8004633249 8004634836 293
57 iso_pu_bacteria 8004640170 8004640805 293
58 iso_pu_bacteria 8018221730 8018222225 293
59 iso_pu_bacteria 8055087960 8055090079 293
60 iso_pu_bacteria 8055092621 8055093111 293
61 iso_pu_bacteria 8055617313 8055620789 293
62 iso_pu_bacteria 8057304971 8057306388 293
63 3300002741 JGI25157J39369_1000162 JGI25157J39369_100016219 294
64 3300006175 Ga0070712_100089181 Ga0070712_1000891812 294
65 3300025250 Ga0209026_1000025 Ga0209026_1000025147 294
66 3300025256 Ga0209759_1000121 Ga0209759_100012185 294
67 3300025916 Ga0207663_10107304 Ga0207663_101073042 294
68 3300041997 Ga0439431_0011826 Ga0439431_0011826_638_1570 294
69 iso_pu_bacteria 2876392853 2876398455 294
70 iso_pu_bacteria 2881147464 2881151346 294
71 iso_pu_bacteria 2881161766 2881167546 294
72 iso_pu_bacteria 2904659560 2904665010 294
73 iso_pu_bacteria 2961114664 2961120009 294
74 iso_pu_bacteria 2968110612 2968116366 294
75 iso_pu_bacteria 2977864932 2977867074 294
76 3300006946 Ga0079104_1002206 Ga0079104_10022066 295
77 3300009011 Ga0105251_10000002 Ga0105251_10000002126 295
78 3300009174 Ga0105241_10000002 Ga0105241_10000002310 295
79 3300013100 Ga0157373_10000541 Ga0157373_1000054111 295
80 3300014497 Ga0182008_10010022 Ga0182008_100100224 295
81 3300025735 Ga0207713_1000008 Ga0207713_1000008220 295
82 3300025911 Ga0207654_10000005 Ga0207654_10000005309 295
83 3300027111 Ga0209281_1000003 Ga0209281_1000003398 295
84 iso_pu_bacteria 2904449895 2904456503 295
85 iso_pu_bacteria 2929520902 2929525561 295
86 iso_pu_bacteria 2924762789 2924764232 296
87 iso_pu_bacteria 2987666974 2987669227 296
88 iso_pu_bacteria 3000135777 3000140643 296
89 3300002737 JGI25162J39368_1000002 JGI25162J39368_100000295 297
90 3300002771 JGI25163J39215_1000043 JGI25163J39215_100004336 297
91 3300002772 JGI25164J39214_1000066 JGI25164J39214_100006622 297
92 3300003751 Ga0055538_1000003 Ga0055538_100000395 297
93 3300003752 Ga0055539_1000003 Ga0055539_1000003522 297
94 3300003756 Ga0055533_1000005 Ga0055533_1000005522 297
95 3300003759 Ga0055525_1000005 Ga0055525_100000595 297
96 3300003841 Ga0055541_1000003 Ga0055541_100000395 297
97 3300003856 Ga0058692_1001201 Ga0058692_10012016 297
98 3300005289 Ga0065704_10003190 Ga0065704_100031905 297
99 3300005530 Ga0070679_100321157 Ga0070679_1003211572 297
100 3300009011 Ga0105251_10012045 Ga0105251_100120455 297
101 3300009011 Ga0105251_10027030 Ga0105251_100270303 297
102 3300009011 Ga0105251_10041835 Ga0105251_100418353 297
103 3300009011 Ga0105251_10042592 Ga0105251_100425922 297
104 3300009036 Ga0105244_10000407 Ga0105244_1000040737 297
105 3300009036 Ga0105244_10006109 Ga0105244_100061099 297
106 3300009036 Ga0105244_10006547 Ga0105244_100065474 297
107 3300009092 Ga0105250_10000070 Ga0105250_1000007085 297
108 3300009092 Ga0105250_10000616 Ga0105250_100006165 297
109 3300009092 Ga0105250_10001622 Ga0105250_100016229 297
110 3300009092 Ga0105250_10079726 Ga0105250_100797262 297
111 3300009093 Ga0105240_10184712 Ga0105240_101847122 297
112 3300009148 Ga0105243_10244342 Ga0105243_102443422 297
113 3300011119 Ga0105246_10000013 Ga0105246_1000001338 297
114 3300013100 Ga0157373_10001081 Ga0157373_1000108114 297
115 3300013102 Ga0157371_10000092 Ga0157371_1000009274 297
116 3300013102 Ga0157371_10003279 Ga0157371_1000327914 297
117 3300013104 Ga0157370_10000596 Ga0157370_1000059614 297
118 3300013105 Ga0157369_10005711 Ga0157369_100057112 297
119 3300013105 Ga0157369_10316793 Ga0157369_103167932 297
120 3300013306 Ga0163162_10747734 Ga0163162_107477342 297
121 3300013307 Ga0157372_10004147 Ga0157372_1000414714 297
122 3300014497 Ga0182008_10045255 Ga0182008_100452552 297
123 3300021384 Ga0213876_10000084 Ga0213876_1000008484 297
124 3300025207 Ga0209760_100005 Ga0209760_10000593 297
125 3300025224 Ga0209784_100001 Ga0209784_1000013280 297
126 3300025225 Ga0209566_100001 Ga0209566_1000013280 297
127 3300025226 Ga0209674_100002 Ga0209674_1000023280 297
128 3300025230 Ga0209563_100002 Ga0209563_1000021815 297
129 3300025231 Ga0207427_100009 Ga0207427_10000993 297
130 3300025233 Ga0209437_100001 Ga0209437_1000011815 297
131 3300025253 Ga0209677_100002 Ga0209677_1000021815 297
132 3300025711 Ga0207696_1000038 Ga0207696_100003871 297
133 3300025711 Ga0207696_1000409 Ga0207696_10004095 297
134 3300025711 Ga0207696_1001983 Ga0207696_10019832 297
135 3300025711 Ga0207696_1009567 Ga0207696_10095673 297
136 3300025711 Ga0207696_1042363 Ga0207696_10423632 297
137 3300025728 Ga0207655_1000002 Ga0207655_10000021051 297
138 3300025728 Ga0207655_1000050 Ga0207655_1000050267 297
139 3300025728 Ga0207655_1000218 Ga0207655_100021862 297
140 3300025728 Ga0207655_1000673 Ga0207655_100067336 297
141 3300025728 Ga0207655_1002788 Ga0207655_10027882 297
142 3300025728 Ga0207655_1014723 Ga0207655_10147234 297
143 3300025735 Ga0207713_1000002 Ga0207713_1000002221 297
144 3300025735 Ga0207713_1000191 Ga0207713_100019175 297
145 3300025735 Ga0207713_1005894 Ga0207713_10058947 297
146 3300025735 Ga0207713_1005935 Ga0207713_10059359 297
147 3300025735 Ga0207713_1037827 Ga0207713_10378272 297
148 3300025935 Ga0207709_10204484 Ga0207709_102044842 297
149 3300027312 Ga0209371_1000017 Ga0209371_1000017154 297
150 3300027312 Ga0209371_1001607 Ga0209371_100160711 297
151 3300030500 Ga0268256_1000036 Ga0268256_1000036217 297
152 3300030500 Ga0268256_1001390 Ga0268256_100139011 297
153 3300031456 Ga0307513_10408378 Ga0307513_104083782 297
154 3300033180 Ga0307510_10220237 Ga0307510_102202371 297
155 3300039437 Ga0436365_0203066 Ga0436365_0203066_105874_106806 297
156 3300042439 Ga0439464_0011013 Ga0439464_0011013_59_952 297
157 3300046471 Ga0495650_0000386 Ga0495650_0000386_805_1698 297
158 3300046542 Ga0495597_0001260 Ga0495597_0001260_15836_16729 297
159 3300046674 Ga0495588_0002391 Ga0495588_0002391_6382_7275 297
160 3300046810 Ga0495660_0000153 Ga0495660_0000153_39539_40432 297
161 3300048919 Ga0496116_0000394 Ga0496116_0000394_28588_29481 297
162 3300048920 Ga0496117_0001290 Ga0496117_0001290_33674_34567 297
163 3300048921 Ga0496118_0000048 Ga0496118_0000048_100703_101596 297
164 3300048921 Ga0496118_0000491 Ga0496118_0000491_28587_29480 297
165 3300048921 Ga0496118_0019239 Ga0496118_0019239_4604_5497 297
166 3300048922 Ga0496119_0079952 Ga0496119_0079952_679_1572 297
167 3300048923 Ga0496120_0030670 Ga0496120_0030670_1804_2697 297
168 3300048925 Ga0496122_0000571 Ga0496122_0000571_73794_74687 297
169 3300048925 Ga0496122_0000810 Ga0496122_0000810_22986_23879 297
170 3300048926 Ga0496123_0000430 Ga0496123_0000430_763_1656 297
171 3300048926 Ga0496123_0001426 Ga0496123_0001426_28588_29481 297
172 3300048927 Ga0496124_0000445 Ga0496124_0000445_34366_35259 297
173 3300048927 Ga0496124_0122622 Ga0496124_0122622_867_1760 297
174 3300048928 Ga0496125_0011442 Ga0496125_0011442_5047_5940 297
175 3300048928 Ga0496125_0088713 Ga0496125_0088713_766_1659 297
176 3300048929 Ga0496126_0037023 Ga0496126_0037023_3350_4243 297
177 3300048929 Ga0496126_0069447 Ga0496126_0069447_1479_2372 297
178 3300050491 nmdc:mga00v17_4678_c1 nmdc:mga00v17_4678_c1_3232_4125 297
179 3300053142 Ga0500577_0005444 Ga0500577_0005444_1073_1984 297
180 iso_pu_bacteria 2856364286 2856369474 297
181 iso_pu_bacteria 2869285874 2869286172 297
182 iso_pu_bacteria 2871429161 2871434605 297
183 iso_pu_bacteria 2874146452 2874149810 297
184 iso_pu_bacteria 2874155637 2874158069 297
185 iso_pu_bacteria 2876413966 2876416273 297
186 iso_pu_bacteria 2878745973 2878751738 297
187 iso_pu_bacteria 2903492973 2903504683 297
188 iso_pu_bacteria 2906308376 2906314136 297
189 iso_pu_bacteria 2906321335 2906327302 297
190 iso_pu_bacteria 2937813078 2937815754 297
191 iso_pu_bacteria 2958041894 2958056592 297
192 iso_pu_bacteria 2958130278 2958130571 297
193 iso_pu_bacteria 2958179912 2958184776 297
194 iso_pu_bacteria 2961077736 2961082943 297
195 iso_pu_bacteria 2977843712 2977845989 297
196 iso_pu_bacteria 8004387939 8004393626 297
197 iso_pu_bacteria 8004714634 8004720394 297
198 3300001989 JGI24739J22299_10032531 JGI24739J22299_100325312 298
199 3300003316 rootH1_10132936 rootH1_101329361 298
200 3300003322 rootL2_10250428 rootL2_102504281 298
201 3300005439 Ga0070711_100489530 Ga0070711_1004895301 298
202 3300005539 Ga0068853_100032132 Ga0068853_1000321322 298
203 3300005614 Ga0068856_100037399 Ga0068856_1000373991 298
204 3300006175 Ga0070712_100358593 Ga0070712_1003585932 298
205 3300006178 Ga0075367_10103320 Ga0075367_101033202 298
206 3300009545 Ga0105237_10129930 Ga0105237_101299302 298
207 3300010375 Ga0105239_10324962 Ga0105239_103249621 298
208 3300015261 Ga0182006_1000144 Ga0182006_100014458 298
209 3300025297 Ga0209758_1024095 Ga0209758_10240952 298
210 3300025904 Ga0207647_10005839 Ga0207647_100058392 298
211 3300025928 Ga0207700_10409504 Ga0207700_104095042 298
212 3300037471 Ga0395905_0158183 Ga0395905_0158183_1051_1950 298
213 iso_pu_bacteria 2512875016 2512931481 298
214 iso_pu_bacteria 2588253730 2588517316 298
215 iso_pu_bacteria 2876363079 2876368461 298
216 iso_pu_bacteria 2889010040 2889010710 298
217 iso_pu_bacteria 2903448605 2903451335 298
218 iso_pu_bacteria 2903521522 2903527460 298
219 iso_pu_bacteria 2903528002 2903533914 298
220 iso_pu_bacteria 2963644680 2963647732 298
221 iso_pu_bacteria 2968083720 2968090365 298
222 iso_pu_bacteria 2977942078 2977942762 298
223 iso_pu_bacteria 637000159 637074581 298
224 3300003792 Ga0055540_1001147 Ga0055540_10011475 299
225 3300005347 Ga0070668_100327520 Ga0070668_1003275202 299
226 3300006028 Ga0070717_10156596 Ga0070717_101565962 299
227 3300006042 Ga0075368_10002973 Ga0075368_100029734 299
228 3300006051 Ga0075364_10155262 Ga0075364_101552622 299
229 3300006178 Ga0075367_10043097 Ga0075367_100430974 299
230 3300006186 Ga0075369_10021271 Ga0075369_100212713 299
231 3300006195 Ga0075366_10020130 Ga0075366_100201301 299
232 3300009093 Ga0105240_10667499 Ga0105240_106674992 299
233 3300015261 Ga0182006_1016795 Ga0182006_10167952 299
234 3300017792 Ga0163161_10001859 Ga0163161_100018595 299
235 3300025303 Ga0209051_1001866 Ga0209051_100186617 299
236 3300027866 Ga0209813_10040527 Ga0209813_100405272 299
237 3300030733 Ga0314311_1255236 Ga0314311_12552362 299
238 3300030735 Ga0316178_1059427 Ga0316178_10594271 299
239 3300030742 Ga0316183_1043820 Ga0316183_10438206 299
240 3300030745 Ga0316182_1255258 Ga0316182_12552582 299
241 3300031911 Ga0307412_10093175 Ga0307412_100931751 299
242 3300032005 Ga0307411_10093043 Ga0307411_100930433 299
243 3300041997 Ga0439431_0072023 Ga0439431_0072023_12_911 299
244 3300042127 Ga0450890_003202 Ga0450890_003202_1071_1970 299
245 3300042145 Ga0450906_009705 Ga0450906_009705_740_1639 299
246 3300042157 Ga0439458_0056305 Ga0439458_0056305_67_966 299
247 3300042531 Ga0450918_004475 Ga0450918_004475_176_1075 299
248 3300046512 Ga0495610_0068823 Ga0495610_0068823_743_1642 299
249 3300046522 Ga0495643_0032508 Ga0495643_0032508_1647_2588 299
250 3300046810 Ga0495660_0064648 Ga0495660_0064648_259_1200 299
251 3300049679 Ga0501249_000542 Ga0501249_000542_7186_8085 299
252 3300049705 Ga0501225_0004484 Ga0501225_0004484_742_1641 299
253 3300050493 nmdc:mga0k408_11673_c1 nmdc:mga0k408_11673_c1_2798_3697 299
254 3300050494 nmdc:mga06z11_211293_c1 nmdc:mga06z11_211293_c1_82_981 299
255 3300050495 nmdc:mga04h51_48547_c1 nmdc:mga04h51_48547_c1_180_1079 299
256 3300050516 nmdc:mga0sz30_11172_c1 nmdc:mga0sz30_11172_c1_800_1699 299
257 3300050516 nmdc:mga0sz30_38380_c2 nmdc:mga0sz30_38380_c2_93_1034 299
258 3300053079 Ga0500610_0021255 Ga0500610_0021255_1628_2569 299
259 3300053151 Ga0500604_0049712 Ga0500604_0049712_28_969 299
260 3300005539 Ga0068853_100013877 Ga0068853_1000138778 300
261 3300005563 Ga0068855_100010874 Ga0068855_1000108746 300
262 3300005614 Ga0068856_100146302 Ga0068856_1001463022 300
263 3300005616 Ga0068852_100044821 Ga0068852_1000448218 300
264 3300009093 Ga0105240_10071251 Ga0105240_100712514 300
265 3300009545 Ga0105237_10011556 Ga0105237_100115563 300
266 3300009551 Ga0105238_10019415 Ga0105238_100194153 300
267 3300009551 Ga0105238_10037032 Ga0105238_100370326 300
268 3300010375 Ga0105239_10022462 Ga0105239_100224623 300
269 3300013100 Ga0157373_10019737 Ga0157373_100197377 300
270 3300025914 Ga0207671_10051335 Ga0207671_100513353 300
271 3300025949 Ga0207667_10006137 Ga0207667_100061376 300
272 3300026142 Ga0207698_10367825 Ga0207698_103678251 300
273 3300047320 Ga0495672_0063894 Ga0495672_0063894_808_1725 300
274 3300048921 Ga0496118_0131321 Ga0496118_0131321_348_1250 300
275 3300048927 Ga0496124_0034467 Ga0496124_0034467_415_1320 300
276 3300021361 Ga0213872_10013761 Ga0213872_100137614 301
277 3300039447 Ga0436361_0522336 Ga0436361_0522336_2119_3024 301
278 3300003762 Ga0055542_1001100 Ga0055542_10011009 302
279 3300005548 Ga0070665_100346971 Ga0070665_1003469712 302
280 3300006038 Ga0075365_10191284 Ga0075365_101912841 302
281 3300006186 Ga0075369_10062234 Ga0075369_100622342 302
282 3300009551 Ga0105238_10156168 Ga0105238_101561682 302
283 3300010375 Ga0105239_10380306 Ga0105239_103803062 302
284 3300025254 Ga0209148_1000128 Ga0209148_10001284 302
285 3300025272 Ga0209455_1000127 Ga0209455_1000127118 302
286 3300025909 Ga0207705_10073798 Ga0207705_100737982 302
287 3300028379 Ga0268266_10265531 Ga0268266_102655311 302
288 iso_pu_bacteria 2508501123 2509113150 302
289 iso_pu_bacteria 2599185301 2599936737 302
290 iso_pu_bacteria 2937848649 2937853167 302
291 iso_pu_bacteria 2977922695 2977924241 302
292 iso_pu_bacteria 3004211236 3004215976 302
293 iso_pu_bacteria 3004218560 3004223726 302
294 3300047318 Ga0495636_0129863 Ga0495636_0129863_131_1042 303
295 iso_pu_bacteria 2977986579 2977992012 303
296 3300009551 Ga0105238_10019608 Ga0105238_100196086 304
297 3300021361 Ga0213872_10000276 Ga0213872_1000027619 304
298 3300025924 Ga0207694_10069018 Ga0207694_100690182 304
299 3300039447 Ga0436361_0526559 Ga0436361_0526559_32702_33616 304
300 3300053156 Ga0500622_0009545 Ga0500622_0009545_1177_2091 304
301 iso_pu_bacteria 2599185307 2599974783 304
302 3300026121 Ga0207683_10064647 Ga0207683_100646473 306
303 3300046459 Ga0495629_0039769 Ga0495629_0039769_149_1069 306
304 3300046675 Ga0495657_0027217 Ga0495657_0027217_2715_3635 306
305 3300046809 Ga0495600_0004782 Ga0495600_0004782_2337_3257 306
306 3300047317 Ga0495604_0031437 Ga0495604_0031437_2629_3549 306
307 3300048922 Ga0496119_0128361 Ga0496119_0128361_124_1044 306
308 3300053119 Ga0500595_001482 Ga0500595_001482_2057_2992 306
309 3300053139 Ga0500568_0003665 Ga0500568_0003665_2350_3285 306
310 3300053148 Ga0500590_009820 Ga0500590_009820_3255_4175 306
311 3300046616 Ga0495668_0177125 Ga0495668_0177125_110_1120 308
312 3300047320 Ga0495672_0186224 Ga0495672_0186224_70_996 308
313 3300005543 Ga0070672_100293648 Ga0070672_1002936482 310
314 3300005563 Ga0068855_100000157 Ga0068855_10000015744 310
315 3300005616 Ga0068852_100018431 Ga0068852_1000184313 310
316 3300009093 Ga0105240_10002740 Ga0105240_1000274024 310
317 3300010375 Ga0105239_10004392 Ga0105239_1000439216 310
318 3300013308 Ga0157375_10068543 Ga0157375_100685431 310
319 3300025913 Ga0207695_10000004 Ga0207695_1000000460 310
320 3300025924 Ga0207694_10000015 Ga0207694_10000015303 310
321 3300025949 Ga0207667_10000160 Ga0207667_1000016044 310
322 3300025960 Ga0207651_10014032 Ga0207651_100140322 310
323 3300026142 Ga0207698_10174956 Ga0207698_101749563 310
324 3300032005 Ga0307411_10172432 Ga0307411_101724322 310
325 3300046471 Ga0495650_0004396 Ga0495650_0004396_5905_6837 310
326 3300047443 Ga0495687_075803 Ga0495687_075803_129_1064 310
327 3300049460 Ga0495682_0000968 Ga0495682_0000968_13705_14637 310
328 3300053133 Ga0500655_006022 Ga0500655_006022_483_1415 310
329 3300005457 Ga0070662_100024210 Ga0070662_1000242105 312
330 3300005546 Ga0070696_100044565 Ga0070696_1000445653 312
331 3300010159 Ga0099796_10010270 Ga0099796_100102703 312
332 3300042437 Ga0439444_0028474 Ga0439444_0028474_27_965 312
333 3300042439 Ga0439464_0031288 Ga0439464_0031288_175_1113 312
334 3300001979 JGI24740J21852_10006482 JGI24740J21852_100064827 313
335 3300041452 Ga0451793_1777097 Ga0451793_1777097_86_1057 313

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

20

79

0.98

PF03466

LysR_substrate

LysR substrate binding domain

103

312

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pzj-assembly1.cif.gz_A-2 1.60 angstrom resolution crystal structure of a transcriptional regulator of the lysr family from eggerthella lenta dsm 2243 0.9167 7 72
7trv-assembly1.cif.gz_A crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9102 7 86
5x0n-assembly2.cif.gz_B regulatory domain of variant c227s aphb from vibrio vulnificus 0.9048 94 296
5fhk-assembly1.cif.gz_B regulatory domain of aphb in vibrio vulnificus 0.903 94 296
5x0o-assembly1.cif.gz_B regulatory domain of aphb treated with cumene hydroperoxide from vibrio vulnificus 0.9028 93 296
ID Description Score Start End Superfamily
af_P75836_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9687 6 87 1.10.10.10
af_P77333_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9658 6 91 1.10.10.10
af_P75836_90_290_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9502 93 294 3.40.190.290
af_P77333_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9444 6 91 1.10.10.10
af_Q57083_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.943 6 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W6XI29-F1-model_v4 DNA-binding transcriptional LysR family regulator 0.982 1 72 GO:0003700
GO:0006351
GO:0043565
AF-A0A4U6BBZ3-F1-model_v4 LysR family transcriptional regulator 0.9455 151 296 GO:0003700
GO:0006351
GO:0043565
AF-A0A242M2C6-F1-model_v4 Putative transcription regulator protein of MDR efflux pump cluster 0.9316 168 271 GO:0003700
GO:0006351
GO:0043565
AF-A0A7Y8EZ58-F1-model_v4 LysR family transcriptional regulator 0.9284 94 297 GO:0003700
GO:0006351
GO:0043565
AF-A0A4U6BBZ3-F1-model_v4 LysR family transcriptional regulator 0.9269 151 296 GO:0003700
GO:0006351
GO:0043565

Feature Viewer

pLDDT pTM Quality
86.03 0.75 High
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Predicted Structure (AlphaFold2)

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