F412475

General Info

Members Datasets Scaffolds Average Seq Length
335 261 670 280

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2835188231|2835191238
Length 299
Sequence DPGTPTPTAPPASATPAPRTSRPRRAVDRLARTPVGLALAVAVLAVLGLAAVAPGVLATYDPFALDYPAALQGPSAAHWFGTDESGRDLYSRVVHGTRESLAIGLGAAAVSLTAAVLLGAVAGLAPRPVARTVDWFLEVLFAFPSLLLALLLIAVVGPSAATQAVAVGVGTAPGYARMVRGQVLQARGSAYVEAAVALGHPRARIVRAHVLPNALRPLVAIFALSVGQSIVWASGLSFIGLGVAPPSPEWGALLDAGRTYITQAGWLTVVPGLVVVLLSLAATTVGRHLQQALEQGEHA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
32 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
33 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
48 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
49 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
50 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
51 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
87 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
89 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
90 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
95 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
117 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
118 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
119 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
144 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
145 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
174 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
175 2511231024 Pseudomonas sp. GM84 Isolate Nodule
176 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
177 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
178 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
179 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
180 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
181 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
182 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
183 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
184 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
185 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
186 2643221616 Leifsonia sp. Root227 Isolate Unclassified
187 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
188 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
189 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
190 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
191 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
192 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
193 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
194 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
195 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
196 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
197 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
198 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
199 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
200 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
201 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
202 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
203 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
204 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
205 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
206 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
207 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
208 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
209 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
210 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
211 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
212 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
213 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
214 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
215 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
216 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
217 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
218 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
219 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
220 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
221 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
222 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
223 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
224 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
225 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
226 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
227 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
228 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
229 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
230 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
231 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
232 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
233 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
234 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
235 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
236 2928153084 Leifsonia sp. 563 Isolate Unclassified
237 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
238 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
239 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
240 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
241 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
242 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
243 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
244 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
245 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
246 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
247 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
248 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
249 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
250 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
251 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
252 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
253 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
254 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
255 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
256 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
257 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
258 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
259 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
260 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
261 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.13
Metatranscriptomes 0.6
Isolates 26.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.45
Nodule 17.91
Rhizoplane 1.79
Rhizosphere 53.43
Stem 0
Stem Tuber 0.3
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10028028 3300001989 Bacteria 1966
2 JGI24737J22298_10036635 3300001990 Bacteria 1514
3 JGI24735J21928_10002024 3300002067 Bacteria 7135
4 JGI24735J21928_10004044 3300002067 Bacteria 4947
5 JGI25164J39214_1000687 3300002772 Bacteria 13357
6 JGI25165J46597_1000148 3300003214 Bacteria 116003
7 Ga0006562J51391_1158173 3300003578 Bacteria 11893
8 Ga0006562J51391_1158174 3300003578 Bacteria 11930
9 Ga0055539_1000014 3300003752 Bacteria 381086
10 Ga0055533_1000002 3300003756 Bacteria 1196393
11 Ga0055532_1010704 3300003758 Bacteria 1093
12 Ga0055525_1000094 3300003759 Bacteria 138254
13 Ga0055525_1006564 3300003759 Bacteria 985
14 Ga0055527_1000003 3300003760 Bacteria 705001
15 Ga0055542_1000005 3300003762 Bacteria 550280
16 Ga0055529_1000006 3300003763 Bacteria 416978
17 Ga0055541_1002115 3300003841 Bacteria 4049
18 Ga0070658_10011504 3300005327 Bacteria 7097
19 Ga0070660_100123173 3300005339 Bacteria 2070
20 Ga0070661_100017833 3300005344 Bacteria 5039
21 Ga0070671_100052431 3300005355 Bacteria 3392
22 Ga0070659_100009667 3300005366 Bacteria 7087
23 Ga0070685_10003610 3300005466 Bacteria 7851
24 Ga0070672_100004313 3300005543 Bacteria 9303
25 Ga0068855_100077705 3300005563 Bacteria 3851
26 Ga0068857_100023802 3300005577 Bacteria 5392
27 Ga0068857_100218377 3300005577 Bacteria 1741
28 Ga0068854_100094184 3300005578 Bacteria 2234
29 Ga0068852_100000552 3300005616 Bacteria 24577
30 Ga0068852_100039416 3300005616 Bacteria 3977
31 Ga0068861_100183887 3300005719 Bacteria 1742
32 Ga0068851_10000008 3300005834 Bacteria 231006
33 Ga0068863_100009239 3300005841 Bacteria 9619
34 Ga0068858_100000672 3300005842 Bacteria 35686
35 Ga0075364_10065426 3300006051 Bacteria 2386
36 Ga0099824_1013766 3300006942 Bacteria 8281
37 Ga0099824_1033671 3300006942 Bacteria 1713
38 Ga0099823_1024018 3300006944 Bacteria 5538
39 Ga0099823_1061289 3300006944 Bacteria 1942
40 Ga0105244_10032625 3300009036 Bacteria 2754
41 Ga0105240_10173923 3300009093 Bacteria 2547
42 Ga0105245_10032494 3300009098 Bacteria 4621
43 Ga0105245_10033924 3300009098 Bacteria 4523
44 Ga0105247_10029025 3300009101 Bacteria 3349
45 Ga0105248_10000985 3300009177 Bacteria 31616
46 Ga0105237_10000342 3300009545 Bacteria 65619
47 Ga0105237_10053707 3300009545 Bacteria 4041
48 Ga0105238_10012621 3300009551 Bacteria 8527
49 Ga0105238_10234894 3300009551 Bacteria 1810
50 Ga0105239_10038782 3300010375 Bacteria 5220
51 Ga0105246_10117126 3300011119 Bacteria 1968
52 Ga0157373_10000141 3300013100 Bacteria 57592
53 Ga0157369_10246994 3300013105 Bacteria 1863
54 Ga0157369_10475725 3300013105 Bacteria 1293
55 Ga0157374_10042329 3300013296 Bacteria 4201
56 Ga0157372_10028111 3300013307 Bacteria 6134
57 Ga0157372_10161637 3300013307 Bacteria 2588
58 Ga0163163_10048261 3300014325 Bacteria 4187
59 Ga0214544_1000005 3300021320 Bacteria 387675
60 Ga0214542_1000004 3300021321 Bacteria 415597
61 Ga0214545_1000005 3300021324 Bacteria 415590
62 Ga0214543_1000030 3300021327 Bacteria 210137
63 Ga0214543_1030842 3300021327 Bacteria 2206
64 Ga0209566_100047 3300025225 Bacteria 243995
65 Ga0209674_100001 3300025226 Bacteria 4013750
66 Ga0209672_100003 3300025228 Bacteria 1560476
67 Ga0209147_101047 3300025229 Bacteria 11727
68 Ga0209563_100001 3300025230 Bacteria 4013775
69 Ga0209563_100346 3300025230 Bacteria 17606
70 Ga0207427_100039 3300025231 Bacteria 291576
71 Ga0209437_100397 3300025233 Bacteria 40909
72 Ga0209258_101753 3300025242 Bacteria 6711
73 Ga0209677_100001 3300025253 Bacteria 4013787
74 Ga0209148_1000004 3300025254 Bacteria 1844481
75 Ga0209233_1000014 3300025261 Bacteria 996641
76 Ga0209455_1000091 3300025272 Bacteria 223115
77 Ga0209256_1001212 3300025299 Bacteria 28781
78 Ga0207656_10000005 3300025321 Bacteria 490514
79 Ga0207647_10014926 3300025904 Bacteria 5338
80 Ga0207705_10046363 3300025909 Bacteria 3123
81 Ga0207654_10386679 3300025911 Bacteria 970
82 Ga0207695_10004727 3300025913 Bacteria 18448
83 Ga0207671_10000016 3300025914 Bacteria 435413
84 Ga0207671_10028660 3300025914 Bacteria 4159
85 Ga0207657_10036528 3300025919 Bacteria 4396
86 Ga0207694_10000019 3300025924 Bacteria 312382
87 Ga0207687_10007582 3300025927 Bacteria 7135
88 Ga0207664_10082035 3300025929 Bacteria 2626
89 Ga0207644_10050117 3300025931 Bacteria 2992
90 Ga0207690_10020121 3300025932 Bacteria 4119
91 Ga0207711_10010338 3300025941 Bacteria 7752
92 Ga0207711_10171325 3300025941 Bacteria 1970
93 Ga0207667_10010881 3300025949 Bacteria 10610
94 Ga0207667_10112323 3300025949 Bacteria 2810
95 Ga0207667_10290983 3300025949 Bacteria 1669
96 Ga0207640_10045406 3300025981 Bacteria 2821
97 Ga0207677_10073637 3300026023 Bacteria 2420
98 Ga0207703_10004275 3300026035 Bacteria 11750
99 Ga0207702_10073455 3300026078 Bacteria 2949
100 Ga0207641_10016069 3300026088 Bacteria 6131
101 Ga0207674_10003932 3300026116 Bacteria 18085
102 Ga0207675_100329266 3300026118 Bacteria 1493
103 Ga0207698_10001278 3300026142 Bacteria 14680
104 Ga0207698_10017377 3300026142 Bacteria 4877
105 Ga0209389_1000106 3300027296 Bacteria 74313
106 Ga0209389_1000164 3300027296 Bacteria 54792
107 Ga0209389_1000380 3300027296 Bacteria 26659
108 Ga0209371_1000356 3300027312 Bacteria 49366
109 Ga0209371_1000618 3300027312 Bacteria 31694
110 Ga0209589_1000441 3300027357 Bacteria 57562
111 Ga0209489_100721 3300027361 Bacteria 65035
112 Ga0209489_108078 3300027361 Bacteria 14855
113 Ga0209489_108346 3300027361 Bacteria 14237
114 Ga0209700_100020 3300027363 Bacteria 235733
115 Ga0307515_10151822 3300028794 Bacteria 2417
116 Ga0268256_1000301 3300030500 Bacteria 49366
117 Ga0268256_1000309 3300030500 Bacteria 49128
118 Ga0307509_10021912 3300031507 Bacteria 7216
119 Ga0307514_10003200 3300031649 Bacteria 15992
120 Ga0307514_10028479 3300031649 Bacteria 4505
121 Ga0315911_1000025 3300033442 Bacteria 93084
122 Ga0373935_0011826 3300035692 Bacteria 5244
123 Ga0395900_0022245 3300037418 Bacteria 6487
124 Ga0395900_0477808 3300037418 Bacteria 1199
125 Ga0395898_0000194 3300037466 Bacteria 155846
126 Ga0395898_0423811 3300037466 Bacteria 1268
127 Ga0436364_0856907 3300037853 Bacteria 71959
128 Ga0395901_0033673 3300038443 Bacteria 5290
129 Ga0436361_0988225 3300039447 Bacteria 2551
130 Ga0439438_000277 3300041405 Bacteria 23094
131 Ga0466969_0027815 3300044656 Bacteria 2894
132 Ga0466969_0059250 3300044656 Bacteria 1862
133 Ga0466972_0006311 3300044658 Bacteria 5956
134 Ga0466965_0000002 3300044683 Bacteria 297957
135 Ga0466965_0038456 3300044683 Bacteria 2350
136 Ga0466966_0003748 3300044684 Bacteria 10021
137 Ga0466966_0076078 3300044684 Bacteria 2096
138 Ga0466966_0087461 3300044684 Bacteria 1937
139 Ga0466961_0034240 3300044693 Bacteria 3261
140 Ga0466961_0098710 3300044693 Bacteria 1841
141 Ga0466963_0059840 3300044694 Bacteria 2543
142 Ga0466964_0342798 3300044706 Unclassified 765
143 Ga0466971_0044603 3300044719 Bacteria 1991
144 Ga0466968_0016109 3300044735 Bacteria 2972
145 Ga0466970_0003564 3300044765 Bacteria 7586
146 Ga0466970_0007610 3300044765 Bacteria 5430
147 Ga0466970_0050323 3300044765 Bacteria 2222
148 Ga0466970_0105628 3300044765 Bacteria 1536
149 Ga0466970_0123872 3300044765 Bacteria 1417
150 Ga0466957_0009422 3300044842 Bacteria 5577
151 Ga0466957_0045598 3300044842 Bacteria 2659
152 Ga0466960_0007112 3300044901 Bacteria 4526
153 Ga0466960_0066191 3300044901 Bacteria 1786
154 Ga0466959_0007912 3300045049 Bacteria 7488
155 Ga0466959_0011710 3300045049 Bacteria 6309
156 Ga0466959_0040057 3300045049 Bacteria 3462
157 Ga0466959_0069724 3300045049 Bacteria 2546
158 Ga0466959_0246878 3300045049 Bacteria 1232
159 Ga0495590_0000639 3300046457 Bacteria 16222
160 Ga0495591_000406 3300046458 Bacteria 35999
161 Ga0495650_0000032 3300046471 Bacteria 425389
162 Ga0495650_0001384 3300046471 Bacteria 23899
163 Ga0495584_0088024 3300046491 Bacteria 1565
164 Ga0495606_0004525 3300046507 Bacteria 13831
165 Ga0495616_0038045 3300046513 Bacteria 2472
166 Ga0495648_0004035 3300046524 Bacteria 12672
167 Ga0495654_0000556 3300046530 Bacteria 30133
168 Ga0495654_0015268 3300046530 Bacteria 4080
169 Ga0495611_0030487 3300046648 Bacteria 2372
170 Ga0495671_0002847 3300046692 Bacteria 10828
171 Ga0495649_0003901 3300046694 Bacteria 9869
172 Ga0495589_0006809 3300046794 Bacteria 6014
173 Ga0495660_0000021 3300046810 Bacteria 293250
174 Ga0495672_0000002 3300047320 Bacteria 740116
175 Ga0495673_0000081 3300047469 Bacteria 199943
176 Ga0496101_0259797 3300048904 Bacteria 1354
177 Ga0496104_0061945 3300048907 Bacteria 3547
178 Ga0496105_0131925 3300048908 Bacteria 2059
179 Ga0496108_0125199 3300048911 Bacteria 2206
180 Ga0496112_0577148 3300048915 Bacteria 1057
181 Ga0496115_0036628 3300048918 Bacteria 3885
182 Ga0496117_0000737 3300048920 Bacteria 51396
183 Ga0496117_0001410 3300048920 Bacteria 34872
184 Ga0496117_0057361 3300048920 Bacteria 2705
185 Ga0496119_0071414 3300048922 Bacteria 2032
186 Ga0496121_0097886 3300048924 Bacteria 2272
187 Ga0496122_0013860 3300048925 Bacteria 7849
188 Ga0496123_0008468 3300048926 Bacteria 9443
189 Ga0496126_0231855 3300048929 Bacteria 1546
190 Ga0496126_0401711 3300048929 Bacteria 1111
191 Ga0495678_000513 3300049459 Bacteria 37746
192 Ga0495682_0000001 3300049460 Bacteria 1559116
193 Ga0501031_0021262 3300049568 Bacteria 4229
194 Ga0501032_0053808 3300049569 Bacteria 2710
195 Ga0501032_0347547 3300049569 Bacteria 956
196 Ga0501033_0009089 3300049570 Bacteria 7667
197 Ga0501033_0021836 3300049570 Bacteria 4830
198 Ga0501033_0065864 3300049570 Bacteria 2664
199 Ga0501033_0074874 3300049570 Bacteria 2485
200 Ga0501034_0018779 3300049571 Bacteria 7085
201 Ga0501034_0025903 3300049571 Bacteria 5973
202 Ga0501034_0029298 3300049571 Bacteria 5595
203 Ga0501034_0038743 3300049571 Bacteria 4827
204 Ga0501034_0077115 3300049571 Bacteria 3338
205 Ga0501034_0102969 3300049571 Bacteria 2848
206 Ga0501034_0154109 3300049571 Bacteria 2272
207 Ga0501034_0413515 3300049571 Bacteria 1270
208 Ga0501036_0257138 3300049572 Bacteria 1463
209 Ga0501037_0033824 3300049573 Bacteria 3774
210 Ga0501037_0048979 3300049573 Bacteria 3094
211 Ga0501038_0020207 3300049574 Bacteria 5992
212 Ga0501038_0027547 3300049574 Bacteria 5055
213 Ga0501038_0138774 3300049574 Bacteria 1990
214 Ga0501039_0071291 3300049575 Bacteria 2700
215 Ga0501039_0135744 3300049575 Bacteria 1931
216 Ga0501042_0017114 3300049578 Bacteria 4994
217 Ga0501043_0041130 3300049579 Bacteria 3632
218 Ga0501043_0109698 3300049579 Bacteria 2167
219 Ga0501043_0403328 3300049579 Bacteria 1033
220 Ga0501046_0481267 3300049580 Bacteria 890
221 Ga0501047_0038537 3300049581 Bacteria 4624
222 Ga0501047_0114951 3300049581 Bacteria 2573
223 Ga0501047_0119622 3300049581 Bacteria 2516
224 Ga0501047_0422365 3300049581 Bacteria 1164
225 Ga0501068_0167106 3300049584 Bacteria 1388
226 Ga0501070_0038936 3300049586 Bacteria 3967
227 Ga0501070_0052855 3300049586 Bacteria 3371
228 Ga0501071_0216261 3300049587 Bacteria 1442
229 Ga0501073_0004268 3300049589 Bacteria 10713
230 Ga0501074_0020353 3300049590 Bacteria 4822
231 Ga0501080_0037495 3300049742 Bacteria 4528
232 Ga0501035_0015090 3300049822 Bacteria 7128
233 Ga0501035_0033602 3300049822 Bacteria 4663
234 Ga0501044_0069048 3300049823 Bacteria 3598
235 Ga0501044_0086464 3300049823 Bacteria 3167
236 nmdc:mga00v17_14520_c1 3300050491 Bacteria 4398
237 nmdc:mga06r32_285679_c1 3300050510 Bacteria 1636
238 Ga0500621_000001 3300053126 Bacteria 1049698
239 Ga0500559_0000431 3300053136 Bacteria 29705
240 Ga0500559_0011602 3300053136 Bacteria 3763
241 Ga0500568_0000051 3300053139 Bacteria 112462
242 Ga0500573_0067068 3300053140 Bacteria 2051
243 Ga0500616_0000088 3300053153 Bacteria 191662
244 Ga0500616_0000192 3300053153 Bacteria 100229
245 Ga0500620_000061 3300053155 Bacteria 20175
246 Ga0466962_0014253 3300061719 Bacteria 3830
247 Ga0466962_0079348 3300061719 Unclassified 1569
248 2835191238 2835188231 Bacteria 3476928
249 2511377769 2511231024 Bacteria 5835885
250 2513621966 2513237092 Bacteria 8341956
251 2513652195 2513237095 Bacteria 8976980
252 2513864119 2513237137 Bacteria 9558895
253 2513879906 2513237139 Bacteria 8737671
254 2514015349 2513237161 Bacteria 8871253
255 2515631354 2515154112 Bacteria 8294334
256 2517890452 2517572143 Bacteria 9484767
257 2528857601 2528768022 Bacteria 10457665
258 2617348631 2617270735 Bacteria 9163226
259 2617386623 2617270742 Bacteria 6808054
260 2644094864 2643221616 Bacteria 4066575
261 2644383991 2643221669 Bacteria 3611286
262 2745074584 2744054633 Bacteria 8678936
263 2805920836 2802429603 Bacteria 8777136
264 2818244236 2816332527 Bacteria 8933356
265 2824601335 2824600985 Bacteria 8488197
266 2824614145 2824609381 Bacteria 8672835
267 2824619700 2824617872 Bacteria 8814715
268 2824629136 2824626560 Bacteria 8813858
269 2824635802 2824635225 Bacteria 8785348
270 2824644787 2824644064 Bacteria 8743947
271 2824655367 2824653114 Bacteria 8493680
272 2824661887 2824661429 Bacteria 9877870
273 2824672673 2824671348 Bacteria 8369588
274 2824681428 2824679649 Bacteria 8248951
275 2824689263 2824687955 Bacteria 8360029
276 2824698005 2824696289 Bacteria 8335049
277 2824704974 2824704595 Bacteria 9667483
278 2824714996 2824714736 Bacteria 8717648
279 2824724472 2824723954 Bacteria 8758240
280 2824733014 2824732956 Bacteria 7810675
281 2824747248 2824746037 Bacteria 7911610
282 2824754022 2824753945 Bacteria 9787441
283 2824765583 2824763712 Bacteria 9792355
284 2838124820 2838122688 Bacteria 8803140
285 2841955684 2841949485 Bacteria 8680857
286 2841961362 2841957949 Bacteria 8652217
287 2841970258 2841966195 Bacteria 8673214
288 2841977085 2841974524 Bacteria 8931498
289 2841985780 2841983080 Bacteria 8395090
290 2844843993 2844841374 Bacteria 3917147
291 2847932838 2847930680 Bacteria 9342022
292 2847941014 2847939898 Bacteria 8606328
293 2848553906 2848551377 Bacteria 3720646
294 2862993536 2862993130 Bacteria 3860849
295 2874613549 2874612657 Bacteria 8252029
296 2874623581 2874620515 Bacteria 8290088
297 2876761488 2876761206 Bacteria 10111113
298 2879083604 2879083081 Bacteria 8587928
299 2881666906 2881665667 Bacteria 8175609
300 2884764304 2884763398 Bacteria 4091164
301 2885371638 2885366525 Bacteria 8326213
302 2888387326 2888378607 Bacteria 9652610
303 2895662284 2895660088 Bacteria 3782833
304 2904673400 2904666416 Bacteria 8226587
305 2904714263 2904711408 Bacteria 9771557
306 2906648501 2906643746 Bacteria 8722424
307 2908777675 2908775508 Bacteria 8092255
308 2919055908 2919055335 Bacteria 3875751
309 2922394069 2922393267 Bacteria 8285685
310 2928154043 2928153084 Bacteria 4020257
311 2929623443 2929615660 Bacteria 9193770
312 2929632815 2929624759 Bacteria 9339455
313 2933585401 2933577622 Bacteria 9116884
314 2935781762 2935777560 Bacteria 8077691
315 2935981757 2935975950 Bacteria 8347125
316 2939663871 2939660829 Bacteria 3784848
317 2946082177 2946080515 Bacteria 4310960
318 3005484050 3005483717 Bacteria 7877331
319 3005594363 3005587118 Bacteria 7794411
320 8016522730 8016522445 Bacteria 8156687
321 8016531153 8016530956 Bacteria 8155261
322 8016544282 8016539877 Bacteria 8155419
323 8016549119 8016548790 Bacteria 8155074
324 8016575131 8016566248 Bacteria 8158151
325 8016575536 8016575299 Bacteria 8154085
326 8016584903 8016583857 Bacteria 10421953
327 8016595536 8016595262 Bacteria 8149947
328 8016613036 8016603502 Bacteria 8731218
329 8019530348 8019530166 Bacteria 8155624
330 8019629511 8019629233 Bacteria 8687553
331 8019648710 8019638758 Bacteria 9062356
332 8019650885 8019648815 Bacteria 10014479
333 8019669097 8019668869 Bacteria 8791617
334 8055743727 8055742211 Bacteria 9226248
335 8057348945 8057345674 Bacteria 4160394
336 JGI24739J22299_10028028
337 JGI24737J22298_10036635
338 JGI24735J21928_10002024
339 JGI24735J21928_10004044
340 JGI25164J39214_1000687
341 JGI25165J46597_1000148
342 Ga0006562J51391_1158173
343 Ga0006562J51391_1158174
344 Ga0055539_1000014
345 Ga0055533_1000002
346 Ga0055532_1010704
347 Ga0055525_1000094
348 Ga0055525_1006564
349 Ga0055527_1000003
350 Ga0055542_1000005
351 Ga0055529_1000006
352 Ga0055541_1002115
353 Ga0070658_10011504
354 Ga0070660_100123173
355 Ga0070661_100017833
356 Ga0070671_100052431
357 Ga0070659_100009667
358 Ga0070685_10003610
359 Ga0070672_100004313
360 Ga0068855_100077705
361 Ga0068857_100023802
362 Ga0068857_100218377
363 Ga0068854_100094184
364 Ga0068852_100000552
365 Ga0068852_100039416
366 Ga0068861_100183887
367 Ga0068851_10000008
368 Ga0068863_100009239
369 Ga0068858_100000672
370 Ga0075364_10065426
371 Ga0099824_1013766
372 Ga0099824_1033671
373 Ga0099823_1024018
374 Ga0099823_1061289
375 Ga0105244_10032625
376 Ga0105240_10173923
377 Ga0105245_10032494
378 Ga0105245_10033924
379 Ga0105247_10029025
380 Ga0105248_10000985
381 Ga0105237_10000342
382 Ga0105237_10053707
383 Ga0105238_10012621
384 Ga0105238_10234894
385 Ga0105239_10038782
386 Ga0105246_10117126
387 Ga0157373_10000141
388 Ga0157369_10246994
389 Ga0157369_10475725
390 Ga0157374_10042329
391 Ga0157372_10028111
392 Ga0157372_10161637
393 Ga0163163_10048261
394 Ga0214544_1000005
395 Ga0214542_1000004
396 Ga0214545_1000005
397 Ga0214543_1000030
398 Ga0214543_1030842
399 Ga0209566_100047
400 Ga0209674_100001
401 Ga0209672_100003
402 Ga0209147_101047
403 Ga0209563_100001
404 Ga0209563_100346
405 Ga0207427_100039
406 Ga0209437_100397
407 Ga0209258_101753
408 Ga0209677_100001
409 Ga0209148_1000004
410 Ga0209233_1000014
411 Ga0209455_1000091
412 Ga0209256_1001212
413 Ga0207656_10000005
414 Ga0207647_10014926
415 Ga0207705_10046363
416 Ga0207654_10386679
417 Ga0207695_10004727
418 Ga0207671_10000016
419 Ga0207671_10028660
420 Ga0207657_10036528
421 Ga0207694_10000019
422 Ga0207687_10007582
423 Ga0207664_10082035
424 Ga0207644_10050117
425 Ga0207690_10020121
426 Ga0207711_10010338
427 Ga0207711_10171325
428 Ga0207667_10010881
429 Ga0207667_10112323
430 Ga0207667_10290983
431 Ga0207640_10045406
432 Ga0207677_10073637
433 Ga0207703_10004275
434 Ga0207702_10073455
435 Ga0207641_10016069
436 Ga0207674_10003932
437 Ga0207675_100329266
438 Ga0207698_10001278
439 Ga0207698_10017377
440 Ga0209389_1000106
441 Ga0209389_1000164
442 Ga0209389_1000380
443 Ga0209371_1000356
444 Ga0209371_1000618
445 Ga0209589_1000441
446 Ga0209489_100721
447 Ga0209489_108078
448 Ga0209489_108346
449 Ga0209700_100020
450 Ga0307515_10151822
451 Ga0268256_1000301
452 Ga0268256_1000309
453 Ga0307509_10021912
454 Ga0307514_10003200
455 Ga0307514_10028479
456 Ga0315911_1000025
457 Ga0373935_0011826
458 Ga0395900_0022245
459 Ga0395900_0477808
460 Ga0395898_0000194
461 Ga0395898_0423811
462 Ga0436364_0856907
463 Ga0395901_0033673
464 Ga0436361_0988225
465 Ga0439438_000277
466 Ga0466969_0027815
467 Ga0466969_0059250
468 Ga0466972_0006311
469 Ga0466965_0000002
470 Ga0466965_0038456
471 Ga0466966_0003748
472 Ga0466966_0076078
473 Ga0466966_0087461
474 Ga0466961_0034240
475 Ga0466961_0098710
476 Ga0466963_0059840
477 Ga0466964_0342798
478 Ga0466971_0044603
479 Ga0466968_0016109
480 Ga0466970_0003564
481 Ga0466970_0007610
482 Ga0466970_0050323
483 Ga0466970_0105628
484 Ga0466970_0123872
485 Ga0466957_0009422
486 Ga0466957_0045598
487 Ga0466960_0007112
488 Ga0466960_0066191
489 Ga0466959_0007912
490 Ga0466959_0011710
491 Ga0466959_0040057
492 Ga0466959_0069724
493 Ga0466959_0246878
494 Ga0495590_0000639
495 Ga0495591_000406
496 Ga0495650_0000032
497 Ga0495650_0001384
498 Ga0495584_0088024
499 Ga0495606_0004525
500 Ga0495616_0038045
501 Ga0495648_0004035
502 Ga0495654_0000556
503 Ga0495654_0015268
504 Ga0495611_0030487
505 Ga0495671_0002847
506 Ga0495649_0003901
507 Ga0495589_0006809
508 Ga0495660_0000021
509 Ga0495672_0000002
510 Ga0495673_0000081
511 Ga0496101_0259797
512 Ga0496104_0061945
513 Ga0496105_0131925
514 Ga0496108_0125199
515 Ga0496112_0577148
516 Ga0496115_0036628
517 Ga0496117_0000737
518 Ga0496117_0001410
519 Ga0496117_0057361
520 Ga0496119_0071414
521 Ga0496121_0097886
522 Ga0496122_0013860
523 Ga0496123_0008468
524 Ga0496126_0231855
525 Ga0496126_0401711
526 Ga0495678_000513
527 Ga0495682_0000001
528 Ga0501031_0021262
529 Ga0501032_0053808
530 Ga0501032_0347547
531 Ga0501033_0009089
532 Ga0501033_0021836
533 Ga0501033_0065864
534 Ga0501033_0074874
535 Ga0501034_0018779
536 Ga0501034_0025903
537 Ga0501034_0029298
538 Ga0501034_0038743
539 Ga0501034_0077115
540 Ga0501034_0102969
541 Ga0501034_0154109
542 Ga0501034_0413515
543 Ga0501036_0257138
544 Ga0501037_0033824
545 Ga0501037_0048979
546 Ga0501038_0020207
547 Ga0501038_0027547
548 Ga0501038_0138774
549 Ga0501039_0071291
550 Ga0501039_0135744
551 Ga0501042_0017114
552 Ga0501043_0041130
553 Ga0501043_0109698
554 Ga0501043_0403328
555 Ga0501046_0481267
556 Ga0501047_0038537
557 Ga0501047_0114951
558 Ga0501047_0119622
559 Ga0501047_0422365
560 Ga0501068_0167106
561 Ga0501070_0038936
562 Ga0501070_0052855
563 Ga0501071_0216261
564 Ga0501073_0004268
565 Ga0501074_0020353
566 Ga0501080_0037495
567 Ga0501035_0015090
568 Ga0501035_0033602
569 Ga0501044_0069048
570 Ga0501044_0086464
571 nmdc:mga00v17_14520_c1
572 nmdc:mga06r32_285679_c1
573 Ga0500621_000001
574 Ga0500559_0000431
575 Ga0500559_0011602
576 Ga0500568_0000051
577 Ga0500573_0067068
578 Ga0500616_0000088
579 Ga0500616_0000192
580 Ga0500620_000061
581 Ga0466962_0014253
582 Ga0466962_0079348
583 2835191238
584 2511377769
585 2513621966
586 2513652195
587 2513864119
588 2513879906
589 2514015349
590 2515631354
591 2517890452
592 2528857601
593 2617348631
594 2617386623
595 2644094864
596 2644383991
597 2745074584
598 2805920836
599 2818244236
600 2824601335
601 2824614145
602 2824619700
603 2824629136
604 2824635802
605 2824644787
606 2824655367
607 2824661887
608 2824672673
609 2824681428
610 2824689263
611 2824698005
612 2824704974
613 2824714996
614 2824724472
615 2824733014
616 2824747248
617 2824754022
618 2824765583
619 2838124820
620 2841955684
621 2841961362
622 2841970258
623 2841977085
624 2841985780
625 2844843993
626 2847932838
627 2847941014
628 2848553906
629 2862993536
630 2874613549
631 2874623581
632 2876761488
633 2879083604
634 2881666906
635 2884764304
636 2885371638
637 2888387326
638 2895662284
639 2904673400
640 2904714263
641 2906648501
642 2908777675
643 2919055908
644 2922394069
645 2928154043
646 2929623443
647 2929632815
648 2933585401
649 2935781762
650 2935981757
651 2939663871
652 2946082177
653 3005484050
654 3005594363
655 8016522730
656 8016531153
657 8016544282
658 8016549119
659 8016575131
660 8016575536
661 8016584903
662 8016595536
663 8016613036
664 8019530348
665 8019629511
666 8019648710
667 8019650885
668 8019669097
669 8055743727
670 8057348945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

115

295

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.753 93 288
7ahd-assembly1.cif.gz_B opua (e190q) occluded 0.7408 82 283
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7355 85 282
3dhw-assembly2.cif.gz_F crystal structure of methionine importer metni 0.7335 85 275
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.7063 92 275
ID Description Score Start End Superfamily
af_P0AGH5_85_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8897 80 285 1.10.3720.10
af_P0AGH5_85_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8779 80 285 1.10.3720.10
af_Q2FVE9_63_269_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8699 80 285 1.10.3720.10
af_Q2FVE9_63_269_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8623 80 285 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8525 93 284 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A4R9BYG3-F1-model_v4 ABC transporter permease 0.9279 29 289 GO:0005886
GO:0055085
AF-A0A7K1KDL4-F1-model_v4 ABC transporter permease 0.9194 29 287 GO:0005886
GO:0055085
AF-A0A837C9W0-F1-model_v4 Putative ABC transporter permease protein 0.9167 27 292 GO:0005886
GO:0055085
AF-A0A4R9BYG3-F1-model_v4 ABC transporter permease 0.9146 29 289 GO:0005886
GO:0055085
AF-A0A399TGJ8-F1-model_v4 deleted 0.9141 28 289

Map