F412478

General Info

Members Datasets Scaffolds Average Seq Length
335 268 670 854

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2870801768|2870803766
Length 925
Sequence TTPQTPDESAEVPETPETGQDVAVEQYVLPEGAADKVEPVDLESEMKRSYLDYAMAVIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRSFNKSARVVGDVMGNYHPHGDTAIYDALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDENTVDMQDNYDGKQQEPAVLPSRYPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLENPEATREELLEALLTRVHGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVVTELPYMTNPDNLAAKIAEMVRDGKINGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIDVIVRRTAFRKRKAEERAHILRGLLKALDMLDEVIATIRRSASADVAREALKELLDIDDVQAQAILQMQLRQLAALESKKIQDEYDELMARIAEYDRILESPQRQREVISEELGEIVAKHGDDRRTEIMAGYDGDMSMEDLIPEEEMVVSITRGGYVKRTRIDQYRSQGRGGKGVRGATLRGDDIVEHFLTVSTHHWLLFFTNFGRVYRIKTYELLEAGRDAKGQHVANLLAFQPDERIAQIQPLTGYDRAPYLVLATRNGLVKKTPLLDYDTNRTAGLIAIKLREGDELVSARVVSPDDDLILISRRGQSLRFTATDEALRPMGRATSGVTGMKFRDDDSLLTMDVVEEDGYVFTVTDGGFAKRTHVDEYRLQNRGGLGIKVAKLVDDRGSLAGGLVVQEDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDRIVAVTLNNEHEMEAQADAEAAEDPVSEGSAAAAGVLPEGEPEALVGAEATAGAAADADVRLDADIDPTDPAAAPEGLLEEDADGEGADGGEQ

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
4 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
17 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
36 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
70 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
76 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
77 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
78 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
79 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
82 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
83 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
84 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
85 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
86 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
155 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
156 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
157 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
158 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
159 2643221549 Agromyces sp. Root1464 Isolate Unclassified
160 2643221553 Microbacterium sp. Root553 Isolate Unclassified
161 2643221566 Microbacterium sp. Root166 Isolate Unclassified
162 2643221572 Leifsonia sp. Root60 Isolate Unclassified
163 2643221575 Microbacterium sp. Root61 Isolate Unclassified
164 2643221613 Oerskovia sp. Root22 Isolate Unclassified
165 2643221616 Leifsonia sp. Root227 Isolate Unclassified
166 2643221619 Agromyces sp. Root81 Isolate Unclassified
167 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
168 2643221649 Leifsonia sp. Root4 Isolate Unclassified
169 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
170 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
171 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
172 2643221721 Oerskovia sp. Root918 Isolate Unclassified
173 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
174 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
175 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
176 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
177 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
178 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
179 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
180 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
181 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
182 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
183 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
184 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
185 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
186 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
187 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
188 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
189 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
190 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
191 2808606394 Promicromonospora sp. C35 Isolate Unclassified
192 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
193 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
194 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
195 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
196 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
197 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
198 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
199 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
200 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
201 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
202 2857727296 Kocuria sp. R-72562 Isolate Unclassified
203 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
204 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
205 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
206 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
207 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
208 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
209 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
210 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
211 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
212 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
213 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
214 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
215 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
216 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
217 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
218 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
219 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
220 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
221 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
222 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
223 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
224 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
225 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
226 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
227 2919395869 Microbacterium resistens 2980 Isolate Unclassified
228 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
229 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
230 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
231 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
232 2928153084 Leifsonia sp. 563 Isolate Unclassified
233 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
234 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
235 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
236 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
237 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
238 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
239 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
240 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
241 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
242 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
243 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
244 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
245 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
246 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
247 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
248 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
249 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
250 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
251 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
252 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
253 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
254 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
255 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
256 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
257 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
258 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
259 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
260 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
261 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
262 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
263 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
264 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
265 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
266 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
267 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
268 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.37
Metatranscriptomes 0.3
Isolates 34.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.3
Bulb 0
Endosphere 9.25
Nodule 0
Rhizoplane 1.79
Rhizosphere 68.66
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000397 3300000549 Bacteria 7337
2 JGI25152J39213_1000068 3300002773 Bacteria 68180
3 Ga0055533_1000002 3300003756 Bacteria 1196393
4 Ga0055527_1000004 3300003760 Bacteria 570634
5 Ga0055542_1000019 3300003762 Bacteria 341174
6 Ga0055542_1004057 3300003762 Bacteria 3699
7 Ga0055529_1000008 3300003763 Bacteria 394786
8 Ga0070658_10000065 3300005327 Bacteria 104621
9 Ga0070658_10012008 3300005327 Bacteria 6955
10 Ga0070673_100002138 3300005364 Bacteria 11973
11 Ga0070659_100021879 3300005366 Bacteria 4878
12 Ga0068853_100016862 3300005539 Bacteria 6018
13 Ga0068855_100001284 3300005563 Bacteria 31118
14 Ga0068857_100005100 3300005577 Bacteria 11165
15 Ga0068852_100008302 3300005616 Bacteria 7644
16 Ga0068852_100020568 3300005616 Bacteria 5250
17 Ga0068851_10000053 3300005834 Bacteria 71192
18 Ga0068858_100000176 3300005842 Bacteria 68056
19 Ga0075432_10003279 3300006058 Bacteria 5468
20 Ga0075369_10001988 3300006186 Bacteria 7186
21 Ga0105245_10034530 3300009098 Bacteria 4486
22 Ga0105243_10008233 3300009148 Bacteria 8009
23 Ga0105248_10000897 3300009177 Bacteria 33319
24 Ga0105248_10028465 3300009177 Bacteria 6225
25 Ga0105238_10000476 3300009551 Bacteria 42016
26 Ga0105246_10001262 3300011119 Bacteria 14850
27 Ga0105246_10001946 3300011119 Bacteria 12440
28 Ga0157369_10000615 3300013105 Bacteria 46292
29 Ga0157369_10033969 3300013105 Bacteria 5601
30 Ga0157369_10072743 3300013105 Bacteria 3690
31 Ga0157378_10013672 3300013297 Bacteria 7099
32 Ga0163163_10023754 3300014325 Bacteria 5824
33 Ga0157379_10002984 3300014968 Bacteria 14273
34 Ga0224712_10005392 3300022467 Bacteria 3556
35 Ga0209674_100001 3300025226 Bacteria 4013750
36 Ga0209672_100011 3300025228 Bacteria 856297
37 Ga0209147_100289 3300025229 Bacteria 42738
38 Ga0209563_100001 3300025230 Bacteria 4013775
39 Ga0209563_101290 3300025230 Bacteria 6850
40 Ga0207425_1003848 3300025245 Bacteria 4669
41 Ga0209677_100001 3300025253 Bacteria 4013787
42 Ga0209148_1000023 3300025254 Bacteria 680511
43 Ga0209148_1001014 3300025254 Bacteria 17716
44 Ga0209129_1000052 3300025258 Bacteria 265251
45 Ga0209455_1000023 3300025272 Bacteria 680449
46 Ga0209455_1002817 3300025272 Bacteria 6468
47 Ga0209025_1000895 3300025294 Bacteria 46371
48 Ga0207656_10000001 3300025321 Bacteria 1323684
49 Ga0207655_1001478 3300025728 Bacteria 21596
50 Ga0207655_1007617 3300025728 Bacteria 6995
51 Ga0207688_10005479 3300025901 Bacteria 6899
52 Ga0207645_10000379 3300025907 Bacteria 36688
53 Ga0207705_10000001 3300025909 Bacteria 2061880
54 Ga0207705_10036982 3300025909 Bacteria 3494
55 Ga0207654_10000001 3300025911 Bacteria 1816198
56 Ga0207695_10001399 3300025913 Bacteria 40720
57 Ga0207695_10002481 3300025913 Bacteria 27163
58 Ga0207671_10000001 3300025914 Bacteria 1318881
59 Ga0207694_10000019 3300025924 Bacteria 312382
60 Ga0207694_10062858 3300025924 Bacteria 2891
61 Ga0207687_10018419 3300025927 Bacteria 4609
62 Ga0207690_10011021 3300025932 Bacteria 5389
63 Ga0207691_10005633 3300025940 Bacteria 12112
64 Ga0207711_10000405 3300025941 Bacteria 45662
65 Ga0207667_10000498 3300025949 Bacteria 51911
66 Ga0207667_10016443 3300025949 Bacteria 8360
67 Ga0207703_10000121 3300026035 Bacteria 94523
68 Ga0207678_10036488 3300026067 Bacteria 4279
69 Ga0207674_10016217 3300026116 Bacteria 8161
70 Ga0207683_10003921 3300026121 Bacteria 12899
71 Ga0207683_10007599 3300026121 Bacteria 9284
72 Ga0207698_10014151 3300026142 Bacteria 5292
73 Ga0207698_10016721 3300026142 Bacteria 4956
74 Ga0207428_10018615 3300027907 Bacteria 5929
75 Ga0307515_10084995 3300028794 Bacteria 4055
76 Ga0307408_100005145 3300031548 Bacteria 8769
77 Ga0307408_100023995 3300031548 Bacteria 4159
78 Ga0307514_10049391 3300031649 Bacteria 3272
79 Ga0307405_10009566 3300031731 Bacteria 4975
80 Ga0307405_10045811 3300031731 Bacteria 2683
81 Ga0307410_10008240 3300031852 Bacteria 5768
82 Ga0307410_10017156 3300031852 Bacteria 4339
83 Ga0307406_10011309 3300031901 Bacteria 5062
84 Ga0307407_10007432 3300031903 Bacteria 4963
85 Ga0307412_10000535 3300031911 Bacteria 22642
86 Ga0307412_10002562 3300031911 Bacteria 10093
87 Ga0307409_100005604 3300031995 Bacteria 7261
88 Ga0307409_100007858 3300031995 Bacteria 6419
89 Ga0307416_100007504 3300032002 Bacteria 6944
90 Ga0307416_100008467 3300032002 Bacteria 6641
91 Ga0307416_100018622 3300032002 Bacteria 4898
92 Ga0307415_100004083 3300032126 Bacteria 7534
93 Ga0307415_100010925 3300032126 Bacteria 5167
94 Ga0307415_100012129 3300032126 Bacteria 4971
95 Ga0373957_0006101 3300035120 Bacteria 3777
96 Ga0373933_0017289 3300035724 Bacteria 4044
97 Ga0373925_0000203 3300037068 Bacteria 64735
98 Ga0395900_0002809 3300037418 Bacteria 19013
99 Ga0395900_0046632 3300037418 Bacteria 4463
100 Ga0395900_0050091 3300037418 Bacteria 4302
101 Ga0395898_0028147 3300037466 Bacteria 5635
102 Ga0395901_0097678 3300038443 Bacteria 3079
103 Ga0439438_005237 3300041405 Bacteria 4809
104 Ga0439466_0001796 3300041411 Bacteria 8391
105 Ga0439433_0000105 3300041999 Bacteria 11820
106 Ga0439442_000015 3300042002 Bacteria 47229
107 Ga0439432_001148 3300042006 Bacteria 10025
108 Ga0439449_0020681 3300042007 Bacteria 2465
109 Ga0439452_001753 3300042010 Bacteria 8495
110 Ga0439457_000845 3300042014 Bacteria 9200
111 Ga0450907_000019 3300042146 Bacteria 75961
112 Ga0450908_002196 3300042184 Bacteria 3828
113 Ga0439434_0000155 3300042435 Bacteria 18258
114 Ga0439434_0000959 3300042435 Bacteria 8306
115 Ga0450918_000278 3300042531 Bacteria 11575
116 Ga0450918_000821 3300042531 Bacteria 6524
117 Ga0466965_0000004 3300044683 Bacteria 229348
118 Ga0466961_0034046 3300044693 Bacteria 3271
119 Ga0466960_0005008 3300044901 Bacteria 5225
120 Ga0495650_0000211 3300046471 Bacteria 125248
121 Ga0495580_0011109 3300046472 Bacteria 6978
122 Ga0495582_0019426 3300046473 Bacteria 3715
123 Ga0495662_0014423 3300046476 Bacteria 3843
124 Ga0495664_0008062 3300046477 Bacteria 5863
125 Ga0495608_0005125 3300046511 Bacteria 9363
126 Ga0495652_0001597 3300046529 Bacteria 24759
127 Ga0495665_0003652 3300046531 Bacteria 8351
128 Ga0495586_0006811 3300046535 Bacteria 6094
129 Ga0495586_0008857 3300046535 Bacteria 5360
130 Ga0495587_0001482 3300046536 Bacteria 15639
131 Ga0495587_0023972 3300046536 Bacteria 3744
132 Ga0495645_0001611 3300046543 Bacteria 15278
133 Ga0495667_0000303 3300046559 Bacteria 31334
134 Ga0495667_0003412 3300046559 Bacteria 10647
135 Ga0495635_0002321 3300046663 Bacteria 12927
136 Ga0495588_0018154 3300046674 Bacteria 3425
137 Ga0495657_0008360 3300046675 Bacteria 7926
138 Ga0495600_0001952 3300046809 Bacteria 11586
139 Ga0495600_0002855 3300046809 Bacteria 10054
140 Ga0495581_0001743 3300047315 Bacteria 12132
141 Ga0495581_0031821 3300047315 Bacteria 3056
142 Ga0495674_0054961 3300047319 Bacteria 3493
143 Ga0495675_0004839 3300047444 Bacteria 8190
144 Ga0495602_0016912 3300048088 Bacteria 7319
145 Ga0496100_0023948 3300048903 Bacteria 3716
146 Ga0496102_0058389 3300048905 Bacteria 3525
147 Ga0496105_0010264 3300048908 Bacteria 7363
148 Ga0496106_0040525 3300048909 Bacteria 3488
149 Ga0496107_0038322 3300048910 Bacteria 3439
150 Ga0496110_0035422 3300048913 Bacteria 4330
151 Ga0496117_0000184 3300048920 Bacteria 127675
152 Ga0496118_0000985 3300048921 Bacteria 44347
153 Ga0496118_0009995 3300048921 Bacteria 9471
154 Ga0496119_0007823 3300048922 Bacteria 9529
155 Ga0496119_0023653 3300048922 Bacteria 4347
156 Ga0496120_0004926 3300048923 Bacteria 10863
157 Ga0496121_0000046 3300048924 Bacteria 335942
158 Ga0496122_0000098 3300048925 Bacteria 198547
159 Ga0496122_0002555 3300048925 Bacteria 25570
160 Ga0496123_0000074 3300048926 Bacteria 196689
161 Ga0496124_0000090 3300048927 Bacteria 192095
162 Ga0496124_0002776 3300048927 Bacteria 22249
163 Ga0496125_0000283 3300048928 Bacteria 100594
164 Ga0496125_0044607 3300048928 Bacteria 3746
165 Ga0501032_0002140 3300049569 Bacteria 15547
166 Ga0501032_0004227 3300049569 Bacteria 10857
167 Ga0501032_0005907 3300049569 Bacteria 9048
168 Ga0501032_0012269 3300049569 Bacteria 6131
169 Ga0501032_0022217 3300049569 Bacteria 4400
170 Ga0501033_0017185 3300049570 Bacteria 5466
171 Ga0501034_0000729 3300049571 Bacteria 49757
172 Ga0501034_0002069 3300049571 Bacteria 25050
173 Ga0501034_0005919 3300049571 Bacteria 13268
174 Ga0501034_0009487 3300049571 Bacteria 10186
175 Ga0501034_0015232 3300049571 Bacteria 7902
176 Ga0501034_0026642 3300049571 Bacteria 5883
177 Ga0501034_0027869 3300049571 Bacteria 5744
178 Ga0501034_0033522 3300049571 Bacteria 5209
179 Ga0501034_0061747 3300049571 Bacteria 3763
180 Ga0501034_0110135 3300049571 Bacteria 2745
181 Ga0501036_0007517 3300049572 Bacteria 8891
182 Ga0501036_0017384 3300049572 Bacteria 6012
183 Ga0501037_0003369 3300049573 Bacteria 11617
184 Ga0501037_0012926 3300049573 Bacteria 6152
185 Ga0501038_0019650 3300049574 Bacteria 6083
186 Ga0501039_0004737 3300049575 Bacteria 10303
187 Ga0501039_0074450 3300049575 Bacteria 2639
188 Ga0501042_0001952 3300049578 Bacteria 12421
189 Ga0501043_0003549 3300049579 Bacteria 12809
190 Ga0501043_0046813 3300049579 Bacteria 3401
191 Ga0501043_0094864 3300049579 Bacteria 2345
192 Ga0501046_0001009 3300049580 Bacteria 27472
193 Ga0501046_0010596 3300049580 Bacteria 7911
194 Ga0501047_0018363 3300049581 Bacteria 6704
195 Ga0501047_0025990 3300049581 Bacteria 5630
196 Ga0501048_0003662 3300049582 Bacteria 11709
197 Ga0501071_0002444 3300049587 Bacteria 11271
198 Ga0501073_0031149 3300049589 Bacteria 3807
199 Ga0501080_0000331 3300049742 Bacteria 36170
200 Ga0501083_0000990 3300049744 Bacteria 18870
201 Ga0501083_0014943 3300049744 Bacteria 5433
202 Ga0501035_0010169 3300049822 Bacteria 8732
203 Ga0501035_0022355 3300049822 Bacteria 5807
204 Ga0501035_0024142 3300049822 Bacteria 5577
205 Ga0501035_0026336 3300049822 Bacteria 5321
206 Ga0501044_0000521 3300049823 Bacteria 46867
207 Ga0501044_0054946 3300049823 Bacteria 4091
208 nmdc:mga0sz30_1736_c1 3300050516 Bacteria 7733
209 Ga0495619_0024873 3300053085 Bacteria 3842
210 Ga0500651_0000041 3300053093 Bacteria 88035
211 Ga0500556_0000527 3300053104 Bacteria 26115
212 Ga0500593_000674 3300053117 Bacteria 12998
213 Ga0500559_0000420 3300053136 Bacteria 30370
214 Ga0500568_0000007 3300053139 Bacteria 292579
215 Ga0500568_0000099 3300053139 Bacteria 80197
216 Ga0500573_0000005 3300053140 Bacteria 315762
217 Ga0500616_0000858 3300053153 Bacteria 33743
218 Ga0500616_0001108 3300053153 Bacteria 27854
219 Ga0500620_000160 3300053155 Bacteria 13526
220 Ga0501082_0005476 3300060353 Bacteria 11017
221 2870803766 2870801768 Bacteria 2710986
222 2537898801 2537561592 Bacteria 4348607
223 2555229203 2554235227 Bacteria 3637389
224 2587861994 2585428094 Bacteria 3604039
225 2588107535 2585428157 Bacteria 3018951
226 2643767159 2643221549 Bacteria 4042819
227 2643784441 2643221553 Bacteria 3544260
228 2643847362 2643221566 Bacteria 3460379
229 2643877159 2643221572 Bacteria 3614809
230 2643887527 2643221575 Bacteria 4022601
231 2644081534 2643221613 Bacteria 4622396
232 2644097392 2643221616 Bacteria 4066575
233 2644112904 2643221619 Bacteria 4158469
234 2644181823 2643221632 Bacteria 3406696
235 2644280149 2643221649 Bacteria 3867359
236 2644384214 2643221669 Bacteria 3611286
237 2644504329 2643221690 Bacteria 4654705
238 2644524149 2643221694 Bacteria 4392972
239 2644664816 2643221721 Bacteria 4486924
240 2644668248 2643221722 Bacteria 4247614
241 2644678383 2643221724 Bacteria 3593515
242 2655030802 2654587600 Bacteria 3911798
243 2691512020 2690315906 Bacteria 4517044
244 2723640044 2721755702 Bacteria 4373124
245 2730227895 2728369380 Bacteria 3620317
246 2738694294 2738541272 Bacteria 6848551
247 2739325164 2738543027 Bacteria 6409078
248 2739609459 2739367654 Bacteria 6049412
249 2753300158 2751185788 Bacteria 4541048
250 2760305417 2758568522 Bacteria 5953541
251 2760626101 2758568621 Bacteria 5967089
252 2775657074 2775506735 Bacteria 4556596
253 2808829182 2808606357 Bacteria 4466944
254 2808850407 2808606360 Bacteria 4404006
255 2808877012 2808606366 Bacteria 4415912
256 2808893427 2808606370 Bacteria 4942454
257 2808898506 2808606371 Bacteria 4251511
258 2809025556 2808606394 Bacteria 6248540
259 2812319074 2811994871 Bacteria 4497550
260 2812325201 2811994872 Bacteria 4121241
261 2817507898 2816332305 Bacteria 2697803
262 2839988967 2839986021 Bacteria 3685650
263 2844844339 2844841374 Bacteria 3917147
264 2844850886 2844849076 Bacteria 4091819
265 2844853639 2844852863 Bacteria 3849151
266 2857479943 2857479173 Bacteria 2469263
267 2857634060 2857632687 Bacteria 2448521
268 2857710549 2857710386 Bacteria 3186771
269 2857728025 2857727296 Bacteria 2745552
270 2857730874 2857729791 Bacteria 4040535
271 2857738795 2857737099 Bacteria 3104305
272 2857743509 2857740372 Bacteria 4782044
273 2870628666 2870628048 Bacteria 3696012
274 2870805710 2870804320 Bacteria 2552467
275 2884763404 2884763398 Bacteria 4091164
276 2884997494 2884994152 Bacteria 4492978
277 2887445242 2887443736 Bacteria 4426037
278 2893685782 2893684298 Bacteria 2897960
279 2895662054 2895660088 Bacteria 3782833
280 2904432162 2904430863 Bacteria 3486923
281 2904498711 2904497146 Bacteria 4731781
282 2904779532 2904776348 Bacteria 4658726
283 2905930463 2905926851 Bacteria 4423176
284 2908677840 2908674828 Bacteria 3382763
285 2909076385 2909074476 Bacteria 3436050
286 2910811271 2910809715 Bacteria 4982797
287 2919036958 2919034639 Bacteria 4763403
288 2919040340 2919039151 Bacteria 3391018
289 2919044438 2919042368 Bacteria 3905917
290 2919053852 2919051321 Bacteria 4210889
291 2919056289 2919055335 Bacteria 3875751
292 2919062729 2919059106 Bacteria 4991624
293 2919392620 2919391150 Bacteria 4884741
294 2919398439 2919395869 Bacteria 3704152
295 2919526291 2919523602 Bacteria 3788128
296 2919541720 2919538618 Bacteria 4677069
297 2928105714 2928104781 Bacteria 3877447
298 2928122547 2928121344 Bacteria 3972376
299 2928154422 2928153084 Bacteria 4020257
300 2928502498 2928500415 Bacteria 3384541
301 2932429507 2932426870 Bacteria 4547726
302 2932434095 2932431166 Bacteria 4215299
303 2933420523 2933418574 Bacteria 4476724
304 2935412455 2935409751 Bacteria 4179611
305 2935894567 2935890801 Bacteria 4593001
306 2939601703 2939598168 Bacteria 4687164
307 2939649630 2939647034 Bacteria 4681660
308 2939677992 2939674588 Bacteria 4844420
309 2945916824 2945916053 Bacteria 4555517
310 2945922903 2945920336 Bacteria 4501603
311 2945945232 2945941187 Bacteria 4682474
312 2945956399 2945956166 Bacteria 5110334
313 2945969766 2945968032 Bacteria 4111363
314 2946006487 2946003308 Bacteria 3857229
315 2946027406 2946024296 Bacteria 3508095
316 2946035643 2946033335 Bacteria 3835514
317 2946041403 2946037020 Bacteria 4900426
318 2946042149 2946041624 Bacteria 4191385
319 2946060653 2946059875 Bacteria 4386623
320 2954002585 2953998280 Bacteria 4812144
321 2966924468 2966921586 Bacteria 3092803
322 2974304837 2974302888 Bacteria 4369871
323 2984552219 2984551494 Bacteria 3877562
324 2995726307 2995726249 Bacteria 3470435
325 8002813194 8002811521 Bacteria 2942897
326 8004022519 8004021418 Bacteria 4313954
327 8004028137 8004025490 Bacteria 4327753
328 8004215530 8004212874 Bacteria 2861420
329 8046354594 8046352972 Bacteria 3613806
330 8054110490 8054107350 Bacteria 5022511
331 8055037714 8055034563 Bacteria 3562128
332 8055039942 8055037949 Bacteria 3337834
333 8056040435 8056037122 Bacteria 3854319
334 8056584491 8056579771 Bacteria 5840325
335 8057346630 8057345674 Bacteria 4160394
336 LJQas_1000397
337 JGI25152J39213_1000068
338 Ga0055533_1000002
339 Ga0055527_1000004
340 Ga0055542_1000019
341 Ga0055542_1004057
342 Ga0055529_1000008
343 Ga0070658_10000065
344 Ga0070658_10012008
345 Ga0070673_100002138
346 Ga0070659_100021879
347 Ga0068853_100016862
348 Ga0068855_100001284
349 Ga0068857_100005100
350 Ga0068852_100008302
351 Ga0068852_100020568
352 Ga0068851_10000053
353 Ga0068858_100000176
354 Ga0075432_10003279
355 Ga0075369_10001988
356 Ga0105245_10034530
357 Ga0105243_10008233
358 Ga0105248_10000897
359 Ga0105248_10028465
360 Ga0105238_10000476
361 Ga0105246_10001262
362 Ga0105246_10001946
363 Ga0157369_10000615
364 Ga0157369_10033969
365 Ga0157369_10072743
366 Ga0157378_10013672
367 Ga0163163_10023754
368 Ga0157379_10002984
369 Ga0224712_10005392
370 Ga0209674_100001
371 Ga0209672_100011
372 Ga0209147_100289
373 Ga0209563_100001
374 Ga0209563_101290
375 Ga0207425_1003848
376 Ga0209677_100001
377 Ga0209148_1000023
378 Ga0209148_1001014
379 Ga0209129_1000052
380 Ga0209455_1000023
381 Ga0209455_1002817
382 Ga0209025_1000895
383 Ga0207656_10000001
384 Ga0207655_1001478
385 Ga0207655_1007617
386 Ga0207688_10005479
387 Ga0207645_10000379
388 Ga0207705_10000001
389 Ga0207705_10036982
390 Ga0207654_10000001
391 Ga0207695_10001399
392 Ga0207695_10002481
393 Ga0207671_10000001
394 Ga0207694_10000019
395 Ga0207694_10062858
396 Ga0207687_10018419
397 Ga0207690_10011021
398 Ga0207691_10005633
399 Ga0207711_10000405
400 Ga0207667_10000498
401 Ga0207667_10016443
402 Ga0207703_10000121
403 Ga0207678_10036488
404 Ga0207674_10016217
405 Ga0207683_10003921
406 Ga0207683_10007599
407 Ga0207698_10014151
408 Ga0207698_10016721
409 Ga0207428_10018615
410 Ga0307515_10084995
411 Ga0307408_100005145
412 Ga0307408_100023995
413 Ga0307514_10049391
414 Ga0307405_10009566
415 Ga0307405_10045811
416 Ga0307410_10008240
417 Ga0307410_10017156
418 Ga0307406_10011309
419 Ga0307407_10007432
420 Ga0307412_10000535
421 Ga0307412_10002562
422 Ga0307409_100005604
423 Ga0307409_100007858
424 Ga0307416_100007504
425 Ga0307416_100008467
426 Ga0307416_100018622
427 Ga0307415_100004083
428 Ga0307415_100010925
429 Ga0307415_100012129
430 Ga0373957_0006101
431 Ga0373933_0017289
432 Ga0373925_0000203
433 Ga0395900_0002809
434 Ga0395900_0046632
435 Ga0395900_0050091
436 Ga0395898_0028147
437 Ga0395901_0097678
438 Ga0439438_005237
439 Ga0439466_0001796
440 Ga0439433_0000105
441 Ga0439442_000015
442 Ga0439432_001148
443 Ga0439449_0020681
444 Ga0439452_001753
445 Ga0439457_000845
446 Ga0450907_000019
447 Ga0450908_002196
448 Ga0439434_0000155
449 Ga0439434_0000959
450 Ga0450918_000278
451 Ga0450918_000821
452 Ga0466965_0000004
453 Ga0466961_0034046
454 Ga0466960_0005008
455 Ga0495650_0000211
456 Ga0495580_0011109
457 Ga0495582_0019426
458 Ga0495662_0014423
459 Ga0495664_0008062
460 Ga0495608_0005125
461 Ga0495652_0001597
462 Ga0495665_0003652
463 Ga0495586_0006811
464 Ga0495586_0008857
465 Ga0495587_0001482
466 Ga0495587_0023972
467 Ga0495645_0001611
468 Ga0495667_0000303
469 Ga0495667_0003412
470 Ga0495635_0002321
471 Ga0495588_0018154
472 Ga0495657_0008360
473 Ga0495600_0001952
474 Ga0495600_0002855
475 Ga0495581_0001743
476 Ga0495581_0031821
477 Ga0495674_0054961
478 Ga0495675_0004839
479 Ga0495602_0016912
480 Ga0496100_0023948
481 Ga0496102_0058389
482 Ga0496105_0010264
483 Ga0496106_0040525
484 Ga0496107_0038322
485 Ga0496110_0035422
486 Ga0496117_0000184
487 Ga0496118_0000985
488 Ga0496118_0009995
489 Ga0496119_0007823
490 Ga0496119_0023653
491 Ga0496120_0004926
492 Ga0496121_0000046
493 Ga0496122_0000098
494 Ga0496122_0002555
495 Ga0496123_0000074
496 Ga0496124_0000090
497 Ga0496124_0002776
498 Ga0496125_0000283
499 Ga0496125_0044607
500 Ga0501032_0002140
501 Ga0501032_0004227
502 Ga0501032_0005907
503 Ga0501032_0012269
504 Ga0501032_0022217
505 Ga0501033_0017185
506 Ga0501034_0000729
507 Ga0501034_0002069
508 Ga0501034_0005919
509 Ga0501034_0009487
510 Ga0501034_0015232
511 Ga0501034_0026642
512 Ga0501034_0027869
513 Ga0501034_0033522
514 Ga0501034_0061747
515 Ga0501034_0110135
516 Ga0501036_0007517
517 Ga0501036_0017384
518 Ga0501037_0003369
519 Ga0501037_0012926
520 Ga0501038_0019650
521 Ga0501039_0004737
522 Ga0501039_0074450
523 Ga0501042_0001952
524 Ga0501043_0003549
525 Ga0501043_0046813
526 Ga0501043_0094864
527 Ga0501046_0001009
528 Ga0501046_0010596
529 Ga0501047_0018363
530 Ga0501047_0025990
531 Ga0501048_0003662
532 Ga0501071_0002444
533 Ga0501073_0031149
534 Ga0501080_0000331
535 Ga0501083_0000990
536 Ga0501083_0014943
537 Ga0501035_0010169
538 Ga0501035_0022355
539 Ga0501035_0024142
540 Ga0501035_0026336
541 Ga0501044_0000521
542 Ga0501044_0054946
543 nmdc:mga0sz30_1736_c1
544 Ga0495619_0024873
545 Ga0500651_0000041
546 Ga0500556_0000527
547 Ga0500593_000674
548 Ga0500559_0000420
549 Ga0500568_0000007
550 Ga0500568_0000099
551 Ga0500573_0000005
552 Ga0500616_0000858
553 Ga0500616_0001108
554 Ga0500620_000160
555 Ga0501082_0005476
556 2870803766
557 2537898801
558 2555229203
559 2587861994
560 2588107535
561 2643767159
562 2643784441
563 2643847362
564 2643877159
565 2643887527
566 2644081534
567 2644097392
568 2644112904
569 2644181823
570 2644280149
571 2644384214
572 2644504329
573 2644524149
574 2644664816
575 2644668248
576 2644678383
577 2655030802
578 2691512020
579 2723640044
580 2730227895
581 2738694294
582 2739325164
583 2739609459
584 2753300158
585 2760305417
586 2760626101
587 2775657074
588 2808829182
589 2808850407
590 2808877012
591 2808893427
592 2808898506
593 2809025556
594 2812319074
595 2812325201
596 2817507898
597 2839988967
598 2844844339
599 2844850886
600 2844853639
601 2857479943
602 2857634060
603 2857710549
604 2857728025
605 2857730874
606 2857738795
607 2857743509
608 2870628666
609 2870805710
610 2884763404
611 2884997494
612 2887445242
613 2893685782
614 2895662054
615 2904432162
616 2904498711
617 2904779532
618 2905930463
619 2908677840
620 2909076385
621 2910811271
622 2919036958
623 2919040340
624 2919044438
625 2919053852
626 2919056289
627 2919062729
628 2919392620
629 2919398439
630 2919526291
631 2919541720
632 2928105714
633 2928122547
634 2928154422
635 2928502498
636 2932429507
637 2932434095
638 2933420523
639 2935412455
640 2935894567
641 2939601703
642 2939649630
643 2939677992
644 2945916824
645 2945922903
646 2945945232
647 2945956399
648 2945969766
649 2946006487
650 2946027406
651 2946035643
652 2946041403
653 2946042149
654 2946060653
655 2954002585
656 2966924468
657 2974304837
658 2984552219
659 2995726307
660 8002813194
661 8004022519
662 8004028137
663 8004215530
664 8046354594
665 8054110490
666 8055037714
667 8055039942
668 8056040435
669 8056584491
670 8057346630

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00521

DNA_topoisoIV

DNA gyrase/topoisomerase IV, subunit A

61

505

0.98

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

691

740

0.97

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

743

791

0.95

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

537

584

0.95

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

643

688

0.94

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

794

841

0.9

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

587

636

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4elz-assembly1.cif.gz_B ccdbvfi:gyra14vfi 0.8939 387 482
1x75-assembly1.cif.gz_A ccdb:gyra14 complex 0.8872 388 484
3ifz-assembly1.cif.gz_B crystal structure of the first part of the mycobacterium tuberculosis dna gyrase reaction core: the breakage and reunion domain at 2.7 a resolution 0.8863 44 514
3ifz-assembly1.cif.gz_B crystal structure of the first part of the mycobacterium tuberculosis dna gyrase reaction core: the breakage and reunion domain at 2.7 a resolution 0.881 44 514
2xcq-assembly1.cif.gz_A-2 the 2.98a crystal structure of the catalytic core (b'a' region) of staphylococcus aureus dna gyrase 0.8809 47 514
ID Description Score Start End Superfamily
2xcqA04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9434 395 482 1.10.268.10
2xcoA04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9432 395 482 1.10.268.10
4ddqB03 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9357 395 482 1.10.268.10
2xcrU04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9315 395 482 1.10.268.10
2xcrS04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9296 395 482 1.10.268.10

Map