F412484

General Info

Members Datasets Scaffolds Average Seq Length
335 268 269 302

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2964636051|2964640252
Length 355
Sequence VLTSIARTSANLPLSVFSKSYSSKHNLFSKRELDETAFWAHNETMSDRFEALQALVTVVSEGGFSAGAKRLGIAKSAVSRRIRDLEDRLGARLFDRTTRRIQLTDSGRALHGRAVALLAALEEAEEAASSASGELKGSIRVAAPVSFAVHCLAPAVGQFLERHPDVSLSIDTDDRMVDLVRDGFDLAIRIAQLPDSSLIARRLVTVRHACVASPALLEHLGTPQKPDDLSRFPGVVYSNREEASYWKFANDVVPSVNTRLDFANGDAVREAAIAGLGVAMLPTFIVHDAVRSGALSIVLAEHMRPPIAMYAVHPSTRHQSARARAFIDFLVDKFRGDPPWDRGLFSDGTADELSI

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
5 2506520008 Serratia plymuthica AS12 Isolate Unclassified
6 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
7 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
8 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
9 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
10 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
11 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
12 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
13 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
14 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
15 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
16 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
17 2534681786 Brucella suis 92/29 Isolate Unclassified
18 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
19 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
20 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
21 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
22 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
23 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
24 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
25 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
26 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
27 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
28 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
29 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
30 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
31 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
32 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
33 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
34 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
35 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
36 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
37 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
38 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
39 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
40 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
41 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
42 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
43 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
44 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
45 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
46 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
47 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
48 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
49 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
50 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
51 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
52 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
53 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
54 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
55 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
56 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
57 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
58 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
59 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
60 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
61 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
62 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
63 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
64 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
65 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
66 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
67 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
68 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
69 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
70 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
71 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
72 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
73 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
74 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
75 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
76 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
77 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
78 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
79 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
80 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
81 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
82 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
83 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
84 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
85 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
86 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
87 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
88 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
89 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
90 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
91 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
92 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
93 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
94 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
95 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
96 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
97 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
98 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
99 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
100 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
101 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
102 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
103 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
104 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
105 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
106 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
107 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
108 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
109 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
110 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
111 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
112 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
113 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
114 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
115 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
116 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
117 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
118 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
119 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
120 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
121 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
122 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
123 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
124 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
125 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
126 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
127 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
128 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
129 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
130 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
131 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
132 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
133 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
134 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
135 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
136 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
137 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
138 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
139 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
140 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
141 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
142 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
143 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
144 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
145 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
146 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
147 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
148 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
150 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
151 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
152 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
153 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
154 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
155 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
156 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
157 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
158 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
159 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
160 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
161 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
184 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
186 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
187 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
189 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
190 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
191 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
192 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
193 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
194 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
195 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
196 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
197 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
198 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
199 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
200 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
201 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
202 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
203 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
204 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
205 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
206 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
207 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
208 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
209 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
210 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
211 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
212 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
213 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
214 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
215 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
216 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
217 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
218 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
219 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
220 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
221 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
222 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
223 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
224 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
225 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
226 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
227 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
228 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
229 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
230 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
231 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
232 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
233 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
234 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
235 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
236 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
237 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
238 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
239 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
240 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
241 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
242 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
243 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
244 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
245 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
246 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
247 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
248 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
249 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
250 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
251 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
252 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
253 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
254 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
255 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
256 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
257 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
258 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
259 640753048 Serratia proteamaculans 568 Isolate Endosphere
260 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
261 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
262 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
263 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
264 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
265 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
266 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
267 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
268 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.3
Metatranscriptomes 0
Isolates 19.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.85
Nodule 8.36
Rhizoplane 0.9
Rhizosphere 63.88
Stem 0
Stem Tuber 0
Unclassified 17.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000263 3300001979 Bacteria 22167
2 JGI24740J21852_10000452 3300001979 Bacteria 17602
3 JGI24735J21928_10006636 3300002067 Bacteria 3801
4 JGI25155J39150_1000023 3300002704 Bacteria 136961
5 JGI25156J39149_1000094 3300002705 Bacteria 65145
6 JGI25162J39368_1000177 3300002737 Bacteria 68786
7 JGI25162J39368_1000803 3300002737 Bacteria 20853
8 JGI25154J39366_1000213 3300002738 Bacteria 40261
9 JGI25157J39369_1000043 3300002741 Bacteria 122537
10 JGI25159J45721_1000489 3300002987 Bacteria 18119
11 JGI25165J46597_1000415 3300003214 Bacteria 44714
12 JGI25165J46597_1000555 3300003214 Bacteria 34009
13 rootH1_10112343 3300003316 Bacteria 3617
14 rootH2_10027335 3300003320 Bacteria 10879
15 rootH2_10042938 3300003320 Bacteria 4423
16 rootL2_10010419 3300003322 Bacteria 9355
17 rootH1_10028824 3300003323 Bacteria 8562
18 rootH1_10176520 3300003323 Bacteria 1798
19 rootH1_10333395 3300003323 Unclassified 1338
20 JGI25160J50197_1000046 3300003354 Bacteria 141352
21 JGI25161J50226_1000031 3300003374 Bacteria 141352
22 Ga0055524_1027100 3300003775 Bacteria 1749
23 Ga0055543_1000637 3300004625 Bacteria 18741
24 Ga0065165_1000336 3300005262 Bacteria 76934
25 Ga0070676_10035383 3300005328 Bacteria 2872
26 Ga0070690_100013331 3300005330 Bacteria 4854
27 Ga0070677_10094391 3300005333 Bacteria 1307
28 Ga0068868_100005643 3300005338 Bacteria 8808
29 Ga0068868_100206572 3300005338 Bacteria 1640
30 Ga0070660_100165387 3300005339 Bacteria 1785
31 Ga0070689_100002817 3300005340 Bacteria 11430
32 Ga0070689_100114668 3300005340 Bacteria 2147
33 Ga0070692_10125887 3300005345 Unclassified 1435
34 Ga0070675_100000208 3300005354 Bacteria 37508
35 Ga0070671_100001433 3300005355 Bacteria 17805
36 Ga0070674_100229476 3300005356 Bacteria 1448
37 Ga0070673_100000523 3300005364 Bacteria 20606
38 Ga0070667_100155481 3300005367 Bacteria 2011
39 Ga0070694_100255140 3300005444 Bacteria 1328
40 Ga0070678_100000227 3300005456 Bacteria 25438
41 Ga0070662_100018207 3300005457 Bacteria 4748
42 Ga0068867_100010588 3300005459 Bacteria 6508
43 Ga0070698_100121060 3300005471 Bacteria 2577
44 Ga0070698_100221898 3300005471 Bacteria 1824
45 Ga0070686_100060352 3300005544 Bacteria 2447
46 Ga0070696_100035571 3300005546 Bacteria 3430
47 Ga0070696_100107124 3300005546 Unclassified 2010
48 Ga0070665_100267018 3300005548 Bacteria 1712
49 Ga0070704_100002659 3300005549 Bacteria 10090
50 Ga0070704_100191202 3300005549 Unclassified 1645
51 Ga0068855_100031912 3300005563 Bacteria 6288
52 Ga0068852_100118074 3300005616 Bacteria 2423
53 Ga0068852_100218689 3300005616 Bacteria 1811
54 Ga0068859_100011744 3300005617 Bacteria 8798
55 Ga0068864_100000101 3300005618 Bacteria 84095
56 Ga0068861_100189620 3300005719 Bacteria 1718
57 Ga0068851_10002602 3300005834 Bacteria 7958
58 Ga0068851_10014702 3300005834 Bacteria 3720
59 Ga0068851_10140491 3300005834 Bacteria 1313
60 Ga0068870_10028700 3300005840 Bacteria 2796
61 Ga0068863_100006341 3300005841 Bacteria 11600
62 Ga0068858_100003879 3300005842 Bacteria 14775
63 Ga0068860_100063405 3300005843 Bacteria 3511
64 Ga0068862_100013169 3300005844 Bacteria 6840
65 Ga0075364_10144488 3300006051 Bacteria 1601
66 Ga0075367_10067564 3300006178 Bacteria 2143
67 Ga0097621_100006594 3300006237 Bacteria 8243
68 Ga0097621_100025023 3300006237 Bacteria 4667
69 Ga0075370_10007956 3300006353 Bacteria 5432
70 Ga0068871_100010068 3300006358 Bacteria 6876
71 Ga0075428_100081854 3300006844 Bacteria 3523
72 Ga0075430_100009971 3300006846 Bacteria 8036
73 Ga0075430_100032428 3300006846 Bacteria 4435
74 Ga0075431_100025882 3300006847 Bacteria 6013
75 Ga0075431_100072620 3300006847 Bacteria 3551
76 Ga0075431_100083209 3300006847 Bacteria 3304
77 Ga0075429_100001204 3300006880 Bacteria 20973
78 Ga0068865_100049558 3300006881 Bacteria 2896
79 Ga0097620_100011744 3300006931 Bacteria 8798
80 Ga0079104_1002058 3300006946 Bacteria 11653
81 Ga0079104_1003899 3300006946 Bacteria 6668
82 Ga0075435_100196974 3300007076 Unclassified 1706
83 Ga0105251_10000036 3300009011 Bacteria 117656
84 Ga0105251_10001621 3300009011 Bacteria 19098
85 Ga0105251_10004773 3300009011 Bacteria 9071
86 Ga0105244_10000909 3300009036 Bacteria 25004
87 Ga0105250_10005040 3300009092 Bacteria 5976
88 Ga0105240_10000278 3300009093 Bacteria 101540
89 Ga0105240_10004374 3300009093 Bacteria 21565
90 Ga0111539_10038283 3300009094 Bacteria 5785
91 Ga0111539_10461510 3300009094 Bacteria 1479
92 Ga0105247_10000059 3300009101 Bacteria 129821
93 Ga0114129_10003148 3300009147 Bacteria 23165
94 Ga0105241_10000012 3300009174 Bacteria 221790
95 Ga0105242_10121875 3300009176 Bacteria 2239
96 Ga0105248_10002989 3300009177 Bacteria 18744
97 Ga0105237_10005254 3300009545 Bacteria 14655
98 Ga0105237_10043463 3300009545 Bacteria 4525
99 Ga0105249_10045791 3300009553 Bacteria 3980
100 Ga0105249_10221027 3300009553 Unclassified 1864
101 Ga0105239_10005703 3300010375 Bacteria 14538
102 Ga0105239_10148879 3300010375 Bacteria 2612
103 Ga0157373_10002331 3300013100 Bacteria 14401
104 Ga0157373_10141963 3300013100 Bacteria 1689
105 Ga0157370_10001488 3300013104 Bacteria 29012
106 Ga0157370_10177672 3300013104 Bacteria 1979
107 Ga0157369_10000743 3300013105 Bacteria 42070
108 Ga0157374_10000155 3300013296 Bacteria 63063
109 Ga0157374_10080209 3300013296 Bacteria 3095
110 Ga0163162_10000475 3300013306 Bacteria 37155
111 Ga0163162_10050562 3300013306 Bacteria 4168
112 Ga0157372_10006295 3300013307 Bacteria 12621
113 Ga0157375_10001221 3300013308 Bacteria 22177
114 Ga0157375_10080121 3300013308 Bacteria 3303
115 Ga0157375_10084852 3300013308 Bacteria 3216
116 Ga0163163_10001383 3300014325 Bacteria 20485
117 Ga0163163_10011794 3300014325 Bacteria 7944
118 Ga0182008_10049155 3300014497 Bacteria 2093
119 Ga0157376_10004985 3300014969 Bacteria 9257
120 Ga0182007_10002129 3300015262 Bacteria 10107
121 Ga0182005_1001660 3300015265 Bacteria 8643
122 Ga0163161_10000038 3300017792 Bacteria 149076
123 Ga0163161_10050122 3300017792 Bacteria 3021
124 Ga0228710_1012388 3300022740 Bacteria 10589
125 Ga0209435_100011 3300025206 Bacteria 413027
126 Ga0209436_107358 3300025208 Bacteria 2307
127 Ga0209672_100439 3300025228 Bacteria 23788
128 Ga0209672_102933 3300025228 Bacteria 3788
129 Ga0209563_104296 3300025230 Bacteria 2746
130 Ga0209437_100036 3300025233 Bacteria 469153
131 Ga0209437_100086 3300025233 Bacteria 254578
132 Ga0209646_1000024 3300025246 Bacteria 413027
133 Ga0209646_1004685 3300025246 Bacteria 2466
134 Ga0209026_1000030 3300025250 Bacteria 329811
135 Ga0209148_1003529 3300025254 Bacteria 4268
136 Ga0209759_1000011 3300025256 Bacteria 413027
137 Ga0209759_1004862 3300025256 Bacteria 4880
138 Ga0209233_1000166 3300025261 Bacteria 152270
139 Ga0209233_1000350 3300025261 Bacteria 43454
140 Ga0209673_1014136 3300025273 Bacteria 3106
141 Ga0209130_1000312 3300025284 Bacteria 57303
142 Ga0209564_1016491 3300025295 Bacteria 2937
143 Ga0209256_1003039 3300025299 Bacteria 12375
144 Ga0207426_1000012 3300025302 Bacteria 730942
145 Ga0207656_10078496 3300025321 Bacteria 1480
146 Ga0207696_1000079 3300025711 Bacteria 199842
147 Ga0207655_1000079 3300025728 Bacteria 219036
148 Ga0207713_1000051 3300025735 Bacteria 225973
149 Ga0207713_1000054 3300025735 Bacteria 222042
150 Ga0207713_1001861 3300025735 Bacteria 16058
151 Ga0207682_10079836 3300025893 Bacteria 1400
152 Ga0207710_10000042 3300025900 Bacteria 223734
153 Ga0207688_10036390 3300025901 Bacteria 2728
154 Ga0207680_10004777 3300025903 Bacteria 6450
155 Ga0207647_10001027 3300025904 Bacteria 21661
156 Ga0207645_10041879 3300025907 Bacteria 2930
157 Ga0207643_10262046 3300025908 Bacteria 1067
158 Ga0207654_10000015 3300025911 Bacteria 221799
159 Ga0207695_10006527 3300025913 Bacteria 15100
160 Ga0207695_10115843 3300025913 Bacteria 2654
161 Ga0207671_10029090 3300025914 Bacteria 4127
162 Ga0207657_10007633 3300025919 Bacteria 11071
163 Ga0207681_10015735 3300025923 Bacteria 4722
164 Ga0207659_10111559 3300025926 Bacteria 2080
165 Ga0207644_10003614 3300025931 Bacteria 10019
166 Ga0207706_10037824 3300025933 Bacteria 4283
167 Ga0207706_10064997 3300025933 Bacteria 3212
168 Ga0207670_10002616 3300025936 Bacteria 9462
169 Ga0207670_10218561 3300025936 Unclassified 1457
170 Ga0207704_10090660 3300025938 Bacteria 2007
171 Ga0207704_10093499 3300025938 Bacteria 1982
172 Ga0207711_10001277 3300025941 Bacteria 23860
173 Ga0207689_10085040 3300025942 Bacteria 2600
174 Ga0207667_10012972 3300025949 Bacteria 9566
175 Ga0207651_10000179 3300025960 Bacteria 27573
176 Ga0207712_10014903 3300025961 Bacteria 5005
177 Ga0207677_10004172 3300026023 Bacteria 7734
178 Ga0207702_10520770 3300026078 Bacteria 1161
179 Ga0207641_10003719 3300026088 Bacteria 13425
180 Ga0207648_10007551 3300026089 Bacteria 10670
181 Ga0207648_10028200 3300026089 Bacteria 4979
182 Ga0207676_10002099 3300026095 Bacteria 14425
183 Ga0207675_100263507 3300026118 Bacteria 1671
184 Ga0207683_10001598 3300026121 Bacteria 20368
185 Ga0207698_10018648 3300026142 Bacteria 4735
186 Ga0209281_1000092 3300027111 Bacteria 241437
187 Ga0209281_1005489 3300027111 Bacteria 3508
188 Ga0209371_1002001 3300027312 Bacteria 12266
189 Ga0209995_1005472 3300027471 Bacteria 2038
190 Ga0268264_10144801 3300028381 Bacteria 2123
191 Ga0268256_1002423 3300030500 Bacteria 9521
192 Ga0373927_0000628 3300035695 Bacteria 26787
193 Ga0373925_0014437 3300037068 Bacteria 5710
194 Ga0395899_0022695 3300037312 Bacteria 4754
195 Ga0395900_0112034 3300037418 Bacteria 2802
196 Ga0395900_0491204 3300037418 Bacteria 1179
197 Ga0395898_0371749 3300037466 Bacteria 1363
198 Ga0395905_0011929 3300037471 Bacteria 8381
199 Ga0395905_0014302 3300037471 Bacteria 7584
200 Ga0395905_0160601 3300037471 Bacteria 2112
201 Ga0395901_0545821 3300038443 Bacteria 1175
202 Ga0439448_0001837 3300042005 Bacteria 5620
203 Ga0451577_0001649 3300042876 Bacteria 28892
204 Ga0466961_0052043 3300044693 Bacteria 2614
205 Ga0466963_0122813 3300044694 Bacteria 1788
206 Ga0453684_0043414 3300044712 Bacteria 6042
207 Ga0466970_0001922 3300044765 Bacteria 10042
208 Ga0466957_0011974 3300044842 Bacteria 5015
209 Ga0451576_0024733 3300045051 Bacteria 6482
210 Ga0466958_0025108 3300045836 Bacteria 3510
211 Ga0495627_000048 3300046453 Bacteria 169824
212 Ga0495590_0088169 3300046457 Bacteria 1096
213 Ga0495607_0005767 3300046501 Bacteria 8809
214 Ga0495606_0059441 3300046507 Bacteria 2452
215 Ga0495632_0131673 3300046519 Bacteria 1163
216 Ga0495643_0034129 3300046522 Bacteria 2809
217 Ga0495654_0000776 3300046530 Bacteria 24665
218 Ga0495654_0054348 3300046530 Bacteria 1943
219 Ga0495621_0008163 3300046539 Bacteria 3129
220 Ga0495589_0000025 3300046794 Bacteria 185024
221 Ga0495660_0041826 3300046810 Bacteria 2535
222 Ga0495686_0007812 3300047472 Bacteria 7956
223 Ga0495686_0018923 3300047472 Bacteria 4611
224 Ga0496103_0146735 3300048906 Bacteria 1510
225 Ga0496114_0724657 3300048917 Unclassified 871
226 Ga0496116_0000009 3300048919 Bacteria 716119
227 Ga0496117_0019613 3300048920 Bacteria 5545
228 Ga0496117_0050825 3300048920 Bacteria 2936
229 Ga0496117_0115410 3300048920 Bacteria 1662
230 Ga0496118_0046725 3300048921 Bacteria 3364
231 Ga0496118_0102519 3300048921 Bacteria 1928
232 Ga0496118_0160000 3300048921 Bacteria 1394
233 Ga0496119_0012143 3300048922 Bacteria 7032
234 Ga0496119_0094734 3300048922 Bacteria 1688
235 Ga0496119_0098984 3300048922 Bacteria 1641
236 Ga0496120_0016719 3300048923 Bacteria 4785
237 Ga0496121_0000001 3300048924 Bacteria 1830318
238 Ga0496122_0011748 3300048925 Bacteria 8824
239 Ga0496122_0081676 3300048925 Bacteria 2248
240 Ga0496123_0019215 3300048926 Bacteria 5392
241 Ga0496124_0023323 3300048927 Bacteria 5651
242 Ga0496124_0036496 3300048927 Bacteria 4286
243 Ga0496125_0000001 3300048928 Bacteria 1766138
244 Ga0496126_0012358 3300048929 Bacteria 8756
245 Ga0496126_0019053 3300048929 Bacteria 6772
246 Ga0501033_0000986 3300049570 Bacteria 25898
247 Ga0501036_0046984 3300049572 Bacteria 3656
248 Ga0501039_0078342 3300049575 Bacteria 2571
249 Ga0501071_0000034 3300049587 Bacteria 45375
250 Ga0501072_0034164 3300049588 Bacteria 3985
251 Ga0501075_0033156 3300049591 Bacteria 3841
252 Ga0501076_0007987 3300049592 Bacteria 7724
253 Ga0501080_0000501 3300049742 Bacteria 30716
254 Ga0501081_0084963 3300049743 Bacteria 2220
255 Ga0501035_0001767 3300049822 Bacteria 21812
256 nmdc:mga00v17_1528_c2 3300050491 Bacteria 11579
257 nmdc:mga0yw44_262174_c1 3300050492 Bacteria 1152
258 nmdc:mga05p37_2555_c1 3300050507 Bacteria 21160
259 nmdc:mga09592_367087_c1 3300050508 Bacteria 1245
260 nmdc:mga09592_577_c1 3300050508 Bacteria 27752
261 nmdc:mga09592_9308_c1 3300050508 Bacteria 7986
262 nmdc:mga0qj67_11973_c1 3300050509 Bacteria 6517
263 nmdc:mga0qj67_17961_c1 3300050509 Bacteria 5385
264 nmdc:mga06r32_19669_c1 3300050510 Bacteria 6202
265 nmdc:mga06r32_199788_c1 3300050510 Bacteria 1987
266 Ga0500618_003682 3300053125 Bacteria 5174
267 Ga0500618_009715 3300053125 Bacteria 2615
268 Ga0500596_016380 3300053735 Bacteria 1114
269 Ga0501084_0024413 3300054114 Bacteria 5043

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0724657 Ga0496114_0724657_115_861 242
2 3300042005 Ga0439448_0001837 Ga0439448_0001837_4798_5580 250
3 3300006946 Ga0079104_1002058 Ga0079104_10020583 274
4 3300027111 Ga0209281_1005489 Ga0209281_10054891 274
5 3300046794 Ga0495589_0000025 Ga0495589_0000025_94295_95245 274
6 3300046530 Ga0495654_0000776 Ga0495654_0000776_14193_15143 275
7 3300046530 Ga0495654_0054348 Ga0495654_0054348_966_1916 275
8 3300006946 Ga0079104_1003899 Ga0079104_10038993 276
9 3300009011 Ga0105251_10000036 Ga0105251_1000003655 276
10 3300009174 Ga0105241_10000012 Ga0105241_10000012113 276
11 3300025735 Ga0207713_1000054 Ga0207713_1000054113 276
12 3300025911 Ga0207654_10000015 Ga0207654_10000015113 276
13 3300027111 Ga0209281_1000092 Ga0209281_1000092114 276
14 3300013100 Ga0157373_10141963 Ga0157373_101419632 279
15 3300022740 Ga0228710_1012388 Ga0228710_101238810 279
16 3300009011 Ga0105251_10004773 Ga0105251_100047738 282
17 3300009092 Ga0105250_10005040 Ga0105250_100050403 282
18 3300009101 Ga0105247_10000059 Ga0105247_1000005938 282
19 3300017792 Ga0163161_10000038 Ga0163161_1000003816 282
20 3300025711 Ga0207696_1000079 Ga0207696_100007989 282
21 3300025735 Ga0207713_1000051 Ga0207713_1000051121 282
22 3300025900 Ga0207710_10000042 Ga0207710_10000042103 282
23 3300048906 Ga0496103_0146735 Ga0496103_0146735_411_1355 282
24 3300048919 Ga0496116_0000009 Ga0496116_0000009_110806_111750 282
25 3300048920 Ga0496117_0019613 Ga0496117_0019613_762_1706 282
26 3300048921 Ga0496118_0046725 Ga0496118_0046725_778_1722 282
27 3300048922 Ga0496119_0098984 Ga0496119_0098984_266_1210 282
28 3300025321 Ga0207656_10078496 Ga0207656_100784962 284
29 3300009176 Ga0105242_10121875 Ga0105242_101218753 289
30 3300014325 Ga0163163_10011794 Ga0163163_100117943 289
31 3300006846 Ga0075430_100032428 Ga0075430_1000324284 290
32 3300006847 Ga0075431_100083209 Ga0075431_1000832092 291
33 3300050510 nmdc:mga06r32_199788_c1 nmdc:mga06r32_199788_c1_280_1179 291
34 iso_pu_bacteria 2802428860 2802734020 291
35 3300006846 Ga0075430_100009971 Ga0075430_1000099713 292
36 3300009147 Ga0114129_10003148 Ga0114129_100031484 292
37 3300050507 nmdc:mga05p37_2555_c1 nmdc:mga05p37_2555_c1_2662_3597 292
38 3300050508 nmdc:mga09592_577_c1 nmdc:mga09592_577_c1_24564_25499 292
39 3300050510 nmdc:mga06r32_19669_c1 nmdc:mga06r32_19669_c1_149_1084 292
40 iso_pu_bacteria 2974320154 2974321359 292
41 3300005328 Ga0070676_10035383 Ga0070676_100353831 293
42 3300005330 Ga0070690_100013331 Ga0070690_1000133312 293
43 3300005333 Ga0070677_10094391 Ga0070677_100943911 293
44 3300005338 Ga0068868_100005643 Ga0068868_1000056438 293
45 3300005340 Ga0070689_100002817 Ga0070689_10000281710 293
46 3300005354 Ga0070675_100000208 Ga0070675_10000020821 293
47 3300005355 Ga0070671_100001433 Ga0070671_10000143310 293
48 3300005356 Ga0070674_100229476 Ga0070674_1002294762 293
49 3300005364 Ga0070673_100000523 Ga0070673_1000005237 293
50 3300005444 Ga0070694_100255140 Ga0070694_1002551401 293
51 3300005456 Ga0070678_100000227 Ga0070678_10000022719 293
52 3300005457 Ga0070662_100018207 Ga0070662_1000182073 293
53 3300005459 Ga0068867_100010588 Ga0068867_1000105884 293
54 3300005471 Ga0070698_100221898 Ga0070698_1002218982 293
55 3300005544 Ga0070686_100060352 Ga0070686_1000603522 293
56 3300005548 Ga0070665_100267018 Ga0070665_1002670181 293
57 3300005617 Ga0068859_100011744 Ga0068859_1000117445 293
58 3300005618 Ga0068864_100000101 Ga0068864_10000010120 293
59 3300005719 Ga0068861_100189620 Ga0068861_1001896202 293
60 3300005834 Ga0068851_10014702 Ga0068851_100147022 293
61 3300005840 Ga0068870_10028700 Ga0068870_100287002 293
62 3300005841 Ga0068863_100006341 Ga0068863_1000063414 293
63 3300005842 Ga0068858_100003879 Ga0068858_1000038792 293
64 3300005843 Ga0068860_100063405 Ga0068860_1000634053 293
65 3300005844 Ga0068862_100013169 Ga0068862_1000131696 293
66 3300006237 Ga0097621_100006594 Ga0097621_1000065947 293
67 3300006358 Ga0068871_100010068 Ga0068871_1000100683 293
68 3300006881 Ga0068865_100049558 Ga0068865_1000495581 293
69 3300006931 Ga0097620_100011744 Ga0097620_1000117445 293
70 3300009177 Ga0105248_10002989 Ga0105248_100029892 293
71 3300009553 Ga0105249_10045791 Ga0105249_100457914 293
72 3300013296 Ga0157374_10080209 Ga0157374_100802091 293
73 3300013306 Ga0163162_10000475 Ga0163162_1000047531 293
74 3300013306 Ga0163162_10050562 Ga0163162_100505624 293
75 3300013308 Ga0157375_10001221 Ga0157375_1000122113 293
76 3300013308 Ga0157375_10080121 Ga0157375_100801213 293
77 3300014325 Ga0163163_10001383 Ga0163163_100013838 293
78 3300014969 Ga0157376_10004985 Ga0157376_100049853 293
79 3300017792 Ga0163161_10050122 Ga0163161_100501224 293
80 3300025893 Ga0207682_10079836 Ga0207682_100798362 293
81 3300025903 Ga0207680_10004777 Ga0207680_100047772 293
82 3300025907 Ga0207645_10041879 Ga0207645_100418792 293
83 3300025908 Ga0207643_10262046 Ga0207643_102620461 293
84 3300025923 Ga0207681_10015735 Ga0207681_100157353 293
85 3300025926 Ga0207659_10111559 Ga0207659_101115592 293
86 3300025931 Ga0207644_10003614 Ga0207644_100036142 293
87 3300025933 Ga0207706_10037824 Ga0207706_100378242 293
88 3300025933 Ga0207706_10064997 Ga0207706_100649975 293
89 3300025936 Ga0207670_10002616 Ga0207670_100026169 293
90 3300025938 Ga0207704_10090660 Ga0207704_100906603 293
91 3300025938 Ga0207704_10093499 Ga0207704_100934991 293
92 3300025941 Ga0207711_10001277 Ga0207711_100012772 293
93 3300025942 Ga0207689_10085040 Ga0207689_100850403 293
94 3300025960 Ga0207651_10000179 Ga0207651_1000017914 293
95 3300025961 Ga0207712_10014903 Ga0207712_100149034 293
96 3300026023 Ga0207677_10004172 Ga0207677_100041725 293
97 3300026088 Ga0207641_10003719 Ga0207641_100037193 293
98 3300026089 Ga0207648_10007551 Ga0207648_100075518 293
99 3300026089 Ga0207648_10028200 Ga0207648_100282006 293
100 3300026095 Ga0207676_10002099 Ga0207676_100020999 293
101 3300026118 Ga0207675_100263507 Ga0207675_1002635072 293
102 3300026121 Ga0207683_10001598 Ga0207683_1000159814 293
103 3300028381 Ga0268264_10144801 Ga0268264_101448012 293
104 3300044712 Ga0453684_0043414 Ga0453684_0043414_4605_5495 293
105 iso_pu_bacteria 2687453129 2687578753 293
106 iso_pu_bacteria 2891048133 2891050263 293
107 iso_pu_bacteria 2510917022 2511136228 294
108 iso_pu_bacteria 2524023209 2524457572 294
109 iso_pu_bacteria 2582581307 2585275391 294
110 iso_pu_bacteria 2582581316 2585330094 294
111 iso_pu_bacteria 2585427531 2585560166 294
112 iso_pu_bacteria 2585427608 2585901564 294
113 iso_pu_bacteria 2585427609 2585905652 294
114 iso_pu_bacteria 2585428125 2587979232 294
115 iso_pu_bacteria 2615840624 2616295738 294
116 iso_pu_bacteria 2615840698 2616553469 294
117 iso_pu_bacteria 2617270742 2617386687 294
118 iso_pu_bacteria 2667528174 2671112423 294
119 iso_pu_bacteria 2775507266 2778174228 294
120 iso_pu_bacteria 2818991448 2819608350 294
121 iso_pu_bacteria 2838029111 2838029239 294
122 iso_pu_bacteria 2842298080 2842300813 294
123 iso_pu_bacteria 2842357229 2842358067 294
124 iso_pu_bacteria 2842475841 2842476331 294
125 iso_pu_bacteria 2842482326 2842482407 294
126 iso_pu_bacteria 2842502639 2842502767 294
127 iso_pu_bacteria 2852387548 2852388550 294
128 iso_pu_bacteria 2917554339 2917555883 294
129 iso_pu_bacteria 2919408235 2919408857 294
130 iso_pu_bacteria 2929138655 2929139017 294
131 iso_pu_bacteria 2939669807 2939673168 294
132 iso_pu_bacteria 2964636051 2964640252 294
133 iso_pu_bacteria 2977523885 2977524984 294
134 iso_pu_bacteria 3005416602 3005422755 294
135 iso_pu_bacteria 8005314921 8005321709 294
136 iso_pu_bacteria 8005484373 8005486085 294
137 iso_pu_bacteria 8005645114 8005650203 294
138 iso_pu_bacteria 8005658619 8005661843 294
139 iso_pu_bacteria 8005682033 8005685061 294
140 iso_pu_bacteria 8024479707 8024484684 294
141 iso_pu_bacteria 8046767195 8046769932 294
142 iso_pu_bacteria 8057575449 8057579880 294
143 3300009011 Ga0105251_10001621 Ga0105251_100016217 295
144 3300009036 Ga0105244_10000909 Ga0105244_1000090916 295
145 3300025728 Ga0207655_1000079 Ga0207655_100007982 295
146 3300025735 Ga0207713_1001861 Ga0207713_10018618 295
147 3300048920 Ga0496117_0115410 Ga0496117_0115410_161_1099 295
148 iso_pu_bacteria 2513237087 2513593613 295
149 iso_pu_bacteria 2534681786 2535486163 295
150 iso_pu_bacteria 2828305725 2828308150 295
151 3300003323 rootH1_10333395 rootH1_103333952 296
152 3300003775 Ga0055524_1027100 Ga0055524_10271002 296
153 3300005338 Ga0068868_100206572 Ga0068868_1002065722 296
154 3300005834 Ga0068851_10002602 Ga0068851_100026022 296
155 3300006178 Ga0075367_10067564 Ga0075367_100675642 296
156 3300006237 Ga0097621_100025023 Ga0097621_1000250234 296
157 3300006880 Ga0075429_100001204 Ga0075429_10000120416 296
158 3300025273 Ga0209673_1014136 Ga0209673_10141364 296
159 3300025295 Ga0209564_1016491 Ga0209564_10164913 296
160 3300025299 Ga0209256_1003039 Ga0209256_100303910 296
161 3300025901 Ga0207688_10036390 Ga0207688_100363905 296
162 3300025913 Ga0207695_10115843 Ga0207695_101158432 296
163 3300026142 Ga0207698_10018648 Ga0207698_100186484 296
164 3300037471 Ga0395905_0160601 Ga0395905_0160601_177_1076 296
165 3300042876 Ga0451577_0001649 Ga0451577_0001649_21655_22554 296
166 3300046457 Ga0495590_0088169 Ga0495590_0088169_56_955 296
167 3300046539 Ga0495621_0008163 Ga0495621_0008163_1579_2481 296
168 3300046810 Ga0495660_0041826 Ga0495660_0041826_841_1740 296
169 3300050492 nmdc:mga0yw44_262174_c1 nmdc:mga0yw44_262174_c1_103_1053 296
170 3300050508 nmdc:mga09592_367087_c1 nmdc:mga09592_367087_c1_264_1163 296
171 3300050508 nmdc:mga09592_9308_c1 nmdc:mga09592_9308_c1_158_1057 296
172 3300050509 nmdc:mga0qj67_11973_c1 nmdc:mga0qj67_11973_c1_5493_6392 296
173 iso_pu_bacteria 2517093001 2517102502 296
174 iso_pu_bacteria 8057575449 8057582632 296
175 3300001979 JGI24740J21852_10000452 JGI24740J21852_1000045219 297
176 3300002067 JGI24735J21928_10006636 JGI24735J21928_100066362 297
177 3300003320 rootH2_10042938 rootH2_100429382 297
178 3300005339 Ga0070660_100165387 Ga0070660_1001653871 297
179 3300005563 Ga0068855_100031912 Ga0068855_1000319124 297
180 3300005616 Ga0068852_100218689 Ga0068852_1002186892 297
181 3300009093 Ga0105240_10004374 Ga0105240_1000437417 297
182 3300009545 Ga0105237_10043463 Ga0105237_100434633 297
183 3300010375 Ga0105239_10148879 Ga0105239_101488791 297
184 3300013100 Ga0157373_10002331 Ga0157373_1000233112 297
185 3300013104 Ga0157370_10177672 Ga0157370_101776722 297
186 3300013105 Ga0157369_10000743 Ga0157369_100007437 297
187 3300013296 Ga0157374_10000155 Ga0157374_100001552 297
188 3300013307 Ga0157372_10006295 Ga0157372_1000629511 297
189 3300013308 Ga0157375_10084852 Ga0157375_100848523 297
190 3300025228 Ga0209672_100439 Ga0209672_1004394 297
191 3300025256 Ga0209759_1004862 Ga0209759_10048625 297
192 3300025904 Ga0207647_10001027 Ga0207647_100010272 297
193 3300025913 Ga0207695_10006527 Ga0207695_1000652712 297
194 3300025914 Ga0207671_10029090 Ga0207671_100290902 297
195 3300025919 Ga0207657_10007633 Ga0207657_100076338 297
196 3300025949 Ga0207667_10012972 Ga0207667_100129728 297
197 3300026078 Ga0207702_10520770 Ga0207702_105207701 297
198 3300037312 Ga0395899_0022695 Ga0395899_0022695_1972_2913 297
199 3300037418 Ga0395900_0112034 Ga0395900_0112034_1584_2525 297
200 3300037418 Ga0395900_0491204 Ga0395900_0491204_55_996 297
201 3300037466 Ga0395898_0371749 Ga0395898_0371749_117_1058 297
202 3300038443 Ga0395901_0545821 Ga0395901_0545821_43_984 297
203 3300044693 Ga0466961_0052043 Ga0466961_0052043_1592_2557 297
204 3300046453 Ga0495627_000048 Ga0495627_000048_80080_81024 297
205 iso_pu_bacteria 2501025501 2501073817 297
206 iso_pu_bacteria 2501025502 2501084730 297
207 iso_pu_bacteria 2501025504 2501407655 297
208 iso_pu_bacteria 2506520007 2506580153 297
209 iso_pu_bacteria 2506520008 2506585292 297
210 iso_pu_bacteria 2510917013 2511092410 297
211 iso_pu_bacteria 2510917014 2511097528 297
212 iso_pu_bacteria 2510917015 2511105524 297
213 iso_pu_bacteria 2513237082 2513556288 297
214 iso_pu_bacteria 2513237083 2513566080 297
215 iso_pu_bacteria 2515154189 2516022531 297
216 iso_pu_bacteria 2654587920 2656277747 297
217 iso_pu_bacteria 2687453601 2689446705 297
218 iso_pu_bacteria 2857357740 2857361341 297
219 iso_pu_bacteria 2869551831 2869556055 297
220 iso_pu_bacteria 2883087390 2883089824 297
221 iso_pu_bacteria 2995392953 2995397110 297
222 iso_pu_bacteria 8003955200 8003959383 297
223 3300001979 JGI24740J21852_10000263 JGI24740J21852_1000026320 298
224 3300002704 JGI25155J39150_1000023 JGI25155J39150_1000023105 298
225 3300002705 JGI25156J39149_1000094 JGI25156J39149_100009448 298
226 3300002737 JGI25162J39368_1000177 JGI25162J39368_100017722 298
227 3300002737 JGI25162J39368_1000803 JGI25162J39368_10008032 298
228 3300002738 JGI25154J39366_1000213 JGI25154J39366_100021319 298
229 3300002741 JGI25157J39369_1000043 JGI25157J39369_100004322 298
230 3300002987 JGI25159J45721_1000489 JGI25159J45721_10004895 298
231 3300003214 JGI25165J46597_1000415 JGI25165J46597_100041520 298
232 3300003214 JGI25165J46597_1000555 JGI25165J46597_100055525 298
233 3300003316 rootH1_10112343 rootH1_101123434 298
234 3300003320 rootH2_10027335 rootH2_100273358 298
235 3300003322 rootL2_10010419 rootL2_100104199 298
236 3300003323 rootH1_10028824 rootH1_1002882410 298
237 3300003323 rootH1_10176520 rootH1_101765202 298
238 3300003354 JGI25160J50197_1000046 JGI25160J50197_100004651 298
239 3300003374 JGI25161J50226_1000031 JGI25161J50226_100003151 298
240 3300004625 Ga0055543_1000637 Ga0055543_100063718 298
241 3300005262 Ga0065165_1000336 Ga0065165_100033671 298
242 3300005340 Ga0070689_100114668 Ga0070689_1001146682 298
243 3300005345 Ga0070692_10125887 Ga0070692_101258872 298
244 3300005367 Ga0070667_100155481 Ga0070667_1001554811 298
245 3300005471 Ga0070698_100121060 Ga0070698_1001210602 298
246 3300005546 Ga0070696_100035571 Ga0070696_1000355712 298
247 3300005546 Ga0070696_100107124 Ga0070696_1001071242 298
248 3300005549 Ga0070704_100002659 Ga0070704_1000026596 298
249 3300005549 Ga0070704_100191202 Ga0070704_1001912022 298
250 3300005616 Ga0068852_100118074 Ga0068852_1001180742 298
251 3300005834 Ga0068851_10140491 Ga0068851_101404912 298
252 3300006051 Ga0075364_10144488 Ga0075364_101444881 298
253 3300006353 Ga0075370_10007956 Ga0075370_100079563 298
254 3300006844 Ga0075428_100081854 Ga0075428_1000818542 298
255 3300006847 Ga0075431_100025882 Ga0075431_1000258821 298
256 3300006847 Ga0075431_100072620 Ga0075431_1000726202 298
257 3300007076 Ga0075435_100196974 Ga0075435_1001969742 298
258 3300009093 Ga0105240_10000278 Ga0105240_1000027882 298
259 3300009094 Ga0111539_10038283 Ga0111539_100382838 298
260 3300009094 Ga0111539_10461510 Ga0111539_104615101 298
261 3300009545 Ga0105237_10005254 Ga0105237_100052544 298
262 3300009553 Ga0105249_10221027 Ga0105249_102210272 298
263 3300010375 Ga0105239_10005703 Ga0105239_1000570310 298
264 3300013104 Ga0157370_10001488 Ga0157370_1000148825 298
265 3300014497 Ga0182008_10049155 Ga0182008_100491552 298
266 3300015262 Ga0182007_10002129 Ga0182007_100021296 298
267 3300015265 Ga0182005_1001660 Ga0182005_10016608 298
268 3300025206 Ga0209435_100011 Ga0209435_100011269 298
269 3300025208 Ga0209436_107358 Ga0209436_1073582 298
270 3300025228 Ga0209672_102933 Ga0209672_1029333 298
271 3300025230 Ga0209563_104296 Ga0209563_1042962 298
272 3300025233 Ga0209437_100036 Ga0209437_10003685 298
273 3300025233 Ga0209437_100086 Ga0209437_100086163 298
274 3300025246 Ga0209646_1000024 Ga0209646_1000024142 298
275 3300025246 Ga0209646_1004685 Ga0209646_10046852 298
276 3300025250 Ga0209026_1000030 Ga0209026_1000030142 298
277 3300025254 Ga0209148_1003529 Ga0209148_10035294 298
278 3300025256 Ga0209759_1000011 Ga0209759_1000011269 298
279 3300025261 Ga0209233_1000166 Ga0209233_100016685 298
280 3300025261 Ga0209233_1000350 Ga0209233_100035024 298
281 3300025284 Ga0209130_1000312 Ga0209130_100031252 298
282 3300025302 Ga0207426_1000012 Ga0207426_100001252 298
283 3300025936 Ga0207670_10218561 Ga0207670_102185612 298
284 3300027312 Ga0209371_1002001 Ga0209371_10020013 298
285 3300027471 Ga0209995_1005472 Ga0209995_10054722 298
286 3300030500 Ga0268256_1002423 Ga0268256_10024232 298
287 3300035695 Ga0373927_0000628 Ga0373927_0000628_150_1046 298
288 3300037068 Ga0373925_0014437 Ga0373925_0014437_3274_4170 298
289 3300037471 Ga0395905_0011929 Ga0395905_0011929_6808_7830 298
290 3300037471 Ga0395905_0014302 Ga0395905_0014302_1180_2076 298
291 3300044694 Ga0466963_0122813 Ga0466963_0122813_21_917 298
292 3300044765 Ga0466970_0001922 Ga0466970_0001922_3457_4353 298
293 3300044842 Ga0466957_0011974 Ga0466957_0011974_568_1464 298
294 3300045051 Ga0451576_0024733 Ga0451576_0024733_2757_3707 298
295 3300045836 Ga0466958_0025108 Ga0466958_0025108_527_1423 298
296 3300046501 Ga0495607_0005767 Ga0495607_0005767_6494_7390 298
297 3300046507 Ga0495606_0059441 Ga0495606_0059441_1131_2027 298
298 3300046519 Ga0495632_0131673 Ga0495632_0131673_31_927 298
299 3300046522 Ga0495643_0034129 Ga0495643_0034129_1188_2084 298
300 3300047472 Ga0495686_0007812 Ga0495686_0007812_564_1460 298
301 3300047472 Ga0495686_0018923 Ga0495686_0018923_2676_3572 298
302 3300048920 Ga0496117_0050825 Ga0496117_0050825_1169_2077 298
303 3300048921 Ga0496118_0102519 Ga0496118_0102519_602_1510 298
304 3300048921 Ga0496118_0160000 Ga0496118_0160000_239_1135 298
305 3300048922 Ga0496119_0012143 Ga0496119_0012143_3763_4671 298
306 3300048922 Ga0496119_0094734 Ga0496119_0094734_109_1005 298
307 3300048923 Ga0496120_0016719 Ga0496120_0016719_3402_4310 298
308 3300048924 Ga0496121_0000001 Ga0496121_0000001_474909_475817 298
309 3300048925 Ga0496122_0011748 Ga0496122_0011748_141_1037 298
310 3300048925 Ga0496122_0081676 Ga0496122_0081676_725_1633 298
311 3300048926 Ga0496123_0019215 Ga0496123_0019215_152_1048 298
312 3300048927 Ga0496124_0023323 Ga0496124_0023323_3117_4025 298
313 3300048927 Ga0496124_0036496 Ga0496124_0036496_276_1172 298
314 3300048928 Ga0496125_0000001 Ga0496125_0000001_586964_587872 298
315 3300048929 Ga0496126_0012358 Ga0496126_0012358_5923_6819 298
316 3300048929 Ga0496126_0019053 Ga0496126_0019053_3051_3959 298
317 3300049570 Ga0501033_0000986 Ga0501033_0000986_6761_7657 298
318 3300049572 Ga0501036_0046984 Ga0501036_0046984_1282_2235 298
319 3300049575 Ga0501039_0078342 Ga0501039_0078342_369_1322 298
320 3300049587 Ga0501071_0000034 Ga0501071_0000034_10769_11722 298
321 3300049588 Ga0501072_0034164 Ga0501072_0034164_1634_2587 298
322 3300049591 Ga0501075_0033156 Ga0501075_0033156_738_1691 298
323 3300049592 Ga0501076_0007987 Ga0501076_0007987_571_1524 298
324 3300049742 Ga0501080_0000501 Ga0501080_0000501_10768_11721 298
325 3300049743 Ga0501081_0084963 Ga0501081_0084963_468_1421 298
326 3300049822 Ga0501035_0001767 Ga0501035_0001767_9659_10555 298
327 3300050491 nmdc:mga00v17_1528_c2 nmdc:mga00v17_1528_c2_8179_9087 298
328 3300050509 nmdc:mga0qj67_17961_c1 nmdc:mga0qj67_17961_c1_3735_4709 298
329 3300053125 Ga0500618_003682 Ga0500618_003682_777_1673 298
330 3300053125 Ga0500618_009715 Ga0500618_009715_353_1249 298
331 3300053735 Ga0500596_016380 Ga0500596_016380_89_985 298
332 3300054114 Ga0501084_0024413 Ga0501084_0024413_1916_2869 298
333 iso_pu_bacteria 2508501071 2508853950 298
334 iso_pu_bacteria 2806310673 2807178086 298
335 iso_pu_bacteria 640753048 640939416 298

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

49

108

0.97

PF03466

LysR_substrate

LysR substrate binding domain

132

335

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9491 2 84
5z4z-assembly1.cif.gz_A crystal structure of pacysb ntd domain with space group c2 0.9348 1 85
7trv-assembly1.cif.gz_B crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9341 1 84
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9211 1 85
5z4z-assembly2.cif.gz_C-2 crystal structure of pacysb ntd domain with space group c2 0.9128 1 85
ID Description Score Start End Superfamily
af_P30864_1_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9898 2 85 1.10.10.10
af_P77700_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9838 5 84 1.10.10.10
af_P37641_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.982 3 82 1.10.10.10
af_P0ACR7_1_84_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9794 3 79 1.10.10.10
af_P67662_3_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.978 3 84 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A258CPL3-F1-model_v4 LysR family transcriptional regulator 0.977 1 83 GO:0003700
GO:0006351
GO:0043565
AF-A0A833KNX1-F1-model_v4 deleted 0.9678 3 74
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9661 2 77 GO:0003677
GO:0003700
GO:0032993
AF-A0A658JMP9-F1-model_v4 deleted 0.9636 2 80
AF-A0A3S0Y3I1-F1-model_v4 LysR family transcriptional regulator 0.9596 1 86 GO:0003700

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pLDDT pTM Quality
87.98 0.7 High
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Predicted Structure (AlphaFold2)

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