F412592

General Info

Members Datasets Scaffolds Average Seq Length
336 168 672 233

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100012738|Ga0068856_1000127381
Length 283
Sequence LVAKSSCPSGALSFLRHDLGILKIDFYGQTSFTPARQPPCAPQYFSRIFKFTGMTFAEKIIDFNNQLHYTGSALPPGIRIMNPFREYPEARRVSEIFYRKYYSDINTRHLILGINPGRFGAGLTGIPFTDPKRLVSECHIEYNGPPAHEPSSVFIYEMINAFGGPERFYGKLYINSLCPLGFTSIDAKGKETNYNYYDSPALATTVNDFIVENIRTQIGLGIQTDACFCFGTGKNENYLRKLNDKHHFFGKIVALEHPRFIMQYKSKSKQQYIDKYLAAFAGL

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
95 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
140 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
153 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
154 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
155 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
156 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
164 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
167 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
168 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.12
Nodule 0
Rhizoplane 0
Rhizosphere 83.63
Stem 0
Stem Tuber 0
Unclassified 6.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100012738 3300005614 Bacteria 8142
2 SwRhRL2b_contig_3412754 2162886007 Bacteria 11884
3 JGI24739J22299_10002569 3300001989 Bacteria 7000
4 JGI25162J39368_1000755 3300002737 Bacteria 21942
5 JGI25165J46597_1000773 3300003214 Bacteria 24441
6 rootH1_10000675 3300003316 Bacteria 8904
7 rootH2_10016295 3300003320 Bacteria 51846
8 rootH2_10123057 3300003320 Bacteria 6682
9 rootH2_10182882 3300003320 Bacteria 2371
10 rootL2_10091364 3300003322 Bacteria 3266
11 rootL2_10096121 3300003322 Bacteria 1810
12 rootL2_10183019 3300003322 Bacteria 2849
13 rootL2_10268629 3300003322 Bacteria 1080
14 rootH1_10005851 3300003323 Bacteria 85811
15 rootH1_10030117 3300003323 Bacteria 8807
16 rootH1_10194405 3300003323 Bacteria 3066
17 rootH1_10228946 3300003323 Bacteria 3340
18 Ga0065704_10070217 3300005289 Bacteria 69033
19 Ga0070658_10000917 3300005327 Bacteria 25190
20 Ga0070680_100017434 3300005336 Bacteria 5663
21 Ga0070680_100239788 3300005336 Bacteria 1532
22 Ga0070682_100014384 3300005337 Bacteria 4571
23 Ga0070660_100018710 3300005339 Bacteria 5067
24 Ga0070660_100055890 3300005339 Unclassified 3052
25 Ga0070660_100081821 3300005339 Bacteria 2535
26 Ga0070691_10002135 3300005341 Bacteria 8744
27 Ga0070671_100016893 3300005355 Bacteria 5904
28 Ga0070673_100004946 3300005364 Bacteria 8490
29 Ga0070673_100440924 3300005364 Bacteria 1170
30 Ga0070659_100000203 3300005366 Bacteria 46107
31 Ga0070659_100062734 3300005366 Bacteria 2938
32 Ga0070659_100086890 3300005366 Bacteria 2503
33 Ga0070714_100347204 3300005435 Bacteria 1393
34 Ga0070662_100159672 3300005457 Bacteria 1762
35 Ga0070681_10020242 3300005458 Bacteria 6670
36 Ga0070681_10020966 3300005458 Bacteria 6547
37 Ga0068867_100000990 3300005459 Bacteria 19370
38 Ga0070679_100005033 3300005530 Bacteria 12199
39 Ga0070679_100006085 3300005530 Bacteria 11225
40 Ga0070679_100052677 3300005530 Bacteria 4052
41 Ga0070679_100394010 3300005530 Bacteria 1331
42 Ga0068853_100003509 3300005539 Bacteria 11993
43 Ga0068853_100034858 3300005539 Bacteria 4273
44 Ga0068853_100114471 3300005539 Unclassified 2399
45 Ga0070693_100001351 3300005547 Bacteria 11036
46 Ga0070665_100000020 3300005548 Bacteria 389687
47 Ga0070665_100421622 3300005548 Unclassified 1343
48 Ga0068855_100000091 3300005563 Bacteria 110526
49 Ga0068855_100145182 3300005563 Bacteria 2702
50 Ga0068855_100254474 3300005563 Bacteria 1958
51 Ga0068855_100398484 3300005563 Bacteria 1508
52 Ga0068855_100404504 3300005563 Unclassified 1495
53 Ga0068856_100004342 3300005614 Bacteria 14127
54 Ga0068856_100023052 3300005614 Bacteria 6054
55 Ga0068852_100001564 3300005616 Bacteria 15545
56 Ga0068858_100193560 3300005842 Bacteria 1921
57 Ga0068860_100001827 3300005843 Bacteria 22677
58 Ga0075366_10000041 3300006195 Bacteria 45335
59 Ga0075366_10000090 3300006195 Bacteria 36322
60 Ga0075366_10006346 3300006195 Bacteria 6475
61 Ga0075366_10017076 3300006195 Bacteria 4173
62 Ga0097621_100001192 3300006237 Bacteria 18004
63 Ga0097621_100672535 3300006237 Bacteria 951
64 Ga0068871_100000088 3300006358 Bacteria 52878
65 Ga0068871_100001062 3300006358 Bacteria 18427
66 Ga0068871_100266215 3300006358 Bacteria 1496
67 Ga0068865_100001897 3300006881 Bacteria 12289
68 Ga0105240_10000068 3300009093 Bacteria 207756
69 Ga0105240_10013501 3300009093 Bacteria 11218
70 Ga0105240_10066865 3300009093 Bacteria 4457
71 Ga0105240_10087950 3300009093 Bacteria 3803
72 Ga0105240_10118453 3300009093 Bacteria 3191
73 Ga0105240_10135548 3300009093 Bacteria 2949
74 Ga0105240_10207941 3300009093 Bacteria 2289
75 Ga0105240_10325997 3300009093 Bacteria 1749
76 Ga0105240_10350335 3300009093 Bacteria 1675
77 Ga0105240_10394275 3300009093 Bacteria 1561
78 Ga0105243_10137516 3300009148 Bacteria 2080
79 Ga0105241_10000299 3300009174 Bacteria 37072
80 Ga0105241_10002169 3300009174 Bacteria 14783
81 Ga0105241_10009258 3300009174 Bacteria 7242
82 Ga0105241_10300933 3300009174 Bacteria 1377
83 Ga0105242_10658045 3300009176 Bacteria 1020
84 Ga0105237_10000703 3300009545 Bacteria 46391
85 Ga0105237_10000819 3300009545 Bacteria 42544
86 Ga0105237_10002120 3300009545 Bacteria 25043
87 Ga0105237_10005753 3300009545 Bacteria 13931
88 Ga0105237_10062686 3300009545 Bacteria 3718
89 Ga0105237_10157340 3300009545 Bacteria 2269
90 Ga0105238_10602109 3300009551 Bacteria 1107
91 Ga0105239_10000062 3300010375 Bacteria 153782
92 Ga0105239_10000710 3300010375 Bacteria 47192
93 Ga0105239_10001181 3300010375 Bacteria 35807
94 Ga0105239_10003014 3300010375 Bacteria 20985
95 Ga0105239_10004292 3300010375 Bacteria 17092
96 Ga0105239_10025098 3300010375 Bacteria 6566
97 Ga0105239_10048703 3300010375 Bacteria 4647
98 Ga0105239_10127518 3300010375 Bacteria 2829
99 Ga0105239_10266772 3300010375 Bacteria 1925
100 Ga0105239_10401870 3300010375 Bacteria 1550
101 Ga0105246_10138706 3300011119 Bacteria 1826
102 Ga0105246_10448570 3300011119 Bacteria 1083
103 Ga0157373_10000040 3300013100 Bacteria 114771
104 Ga0157373_10000440 3300013100 Bacteria 32951
105 Ga0157373_10000978 3300013100 Bacteria 22107
106 Ga0157371_10000868 3300013102 Bacteria 34292
107 Ga0157371_10002650 3300013102 Bacteria 16949
108 Ga0157371_10003623 3300013102 Bacteria 13903
109 Ga0157371_10042814 3300013102 Bacteria 3227
110 Ga0157371_10086372 3300013102 Bacteria 2222
111 Ga0157371_10127622 3300013102 Bacteria 1809
112 Ga0157371_10512808 3300013102 Bacteria 886
113 Ga0157370_10000313 3300013104 Bacteria 60838
114 Ga0157370_10000775 3300013104 Bacteria 40028
115 Ga0157370_10014842 3300013104 Bacteria 7947
116 Ga0157370_10027681 3300013104 Bacteria 5588
117 Ga0157370_10047565 3300013104 Bacteria 4112
118 Ga0157370_10306262 3300013104 Bacteria 1466
119 Ga0157369_10064947 3300013105 Bacteria 3930
120 Ga0157369_10272085 3300013105 Bacteria 1765
121 Ga0157374_10008877 3300013296 Bacteria 8608
122 Ga0157374_10038138 3300013296 Bacteria 4416
123 Ga0157374_10157416 3300013296 Bacteria 2212
124 Ga0157374_10219421 3300013296 Bacteria 1866
125 Ga0157374_10224810 3300013296 Bacteria 1843
126 Ga0157374_10265158 3300013296 Bacteria 1693
127 Ga0157374_10618709 3300013296 Bacteria 1094
128 Ga0157378_10004272 3300013297 Bacteria 12592
129 Ga0157378_10043734 3300013297 Bacteria 3977
130 Ga0163162_10000321 3300013306 Bacteria 44220
131 Ga0163162_10001597 3300013306 Bacteria 21190
132 Ga0163162_10007807 3300013306 Bacteria 10431
133 Ga0163162_11615240 3300013306 Bacteria 740
134 Ga0157372_10001538 3300013307 Bacteria 25109
135 Ga0157372_10036181 3300013307 Bacteria 5441
136 Ga0157372_10047395 3300013307 Bacteria 4776
137 Ga0157372_10114788 3300013307 Bacteria 3088
138 Ga0157372_10198461 3300013307 Bacteria 2324
139 Ga0157372_10343450 3300013307 Bacteria 1739
140 Ga0157375_10038721 3300013308 Bacteria 4580
141 Ga0157375_10043913 3300013308 Bacteria 4337
142 Ga0157377_10095924 3300014745 Bacteria 1759
143 Ga0157376_10010695 3300014969 Bacteria 6727
144 Ga0182006_1001021 3300015261 Bacteria 18288
145 Ga0213872_10043509 3300021361 Bacteria 2046
146 Ga0207427_100025 3300025231 Bacteria 433726
147 Ga0209437_100010 3300025233 Bacteria 838447
148 Ga0209437_100017 3300025233 Bacteria 694471
149 Ga0209258_100145 3300025242 Bacteria 163672
150 Ga0209026_1000251 3300025250 Bacteria 67956
151 Ga0209148_1000177 3300025254 Bacteria 127365
152 Ga0209233_1000017 3300025261 Bacteria 898076
153 Ga0209233_1002900 3300025261 Bacteria 6128
154 Ga0209455_1002123 3300025272 Bacteria 7863
155 Ga0207647_10000273 3300025904 Bacteria 41974
156 Ga0207647_10048032 3300025904 Bacteria 2652
157 Ga0207647_10129990 3300025904 Bacteria 1481
158 Ga0207647_10202577 3300025904 Bacteria 1147
159 Ga0207647_10346314 3300025904 Bacteria 842
160 Ga0207645_10000413 3300025907 Bacteria 35446
161 Ga0207705_10000833 3300025909 Bacteria 25202
162 Ga0207705_10051876 3300025909 Unclassified 2952
163 Ga0207705_10173863 3300025909 Bacteria 1622
164 Ga0207654_10001398 3300025911 Bacteria 12789
165 Ga0207654_10002165 3300025911 Bacteria 10056
166 Ga0207707_10000467 3300025912 Bacteria 41919
167 Ga0207707_10012948 3300025912 Bacteria 7262
168 Ga0207707_10051809 3300025912 Bacteria 3574
169 Ga0207695_10000131 3300025913 Bacteria 223762
170 Ga0207695_10003229 3300025913 Bacteria 23197
171 Ga0207695_10038492 3300025913 Bacteria 5148
172 Ga0207695_10087079 3300025913 Bacteria 3147
173 Ga0207695_10208269 3300025913 Bacteria 1867
174 Ga0207695_10422385 3300025913 Bacteria 1217
175 Ga0207695_10621205 3300025913 Bacteria 962
176 Ga0207671_10001916 3300025914 Bacteria 23094
177 Ga0207671_10004065 3300025914 Bacteria 14180
178 Ga0207671_10026865 3300025914 Unclassified 4306
179 Ga0207671_10029139 3300025914 Bacteria 4124
180 Ga0207660_10011969 3300025917 Bacteria 5664
181 Ga0207660_10015898 3300025917 Bacteria 4975
182 Ga0207657_10037403 3300025919 Bacteria 4334
183 Ga0207657_10106328 3300025919 Bacteria 2322
184 Ga0207652_10000160 3300025921 Bacteria 72867
185 Ga0207652_10007289 3300025921 Bacteria 8909
186 Ga0207652_10037637 3300025921 Bacteria 4095
187 Ga0207652_10087292 3300025921 Bacteria 2735
188 Ga0207694_10612752 3300025924 Bacteria 916
189 Ga0207644_10029644 3300025931 Bacteria 3798
190 Ga0207690_10000212 3300025932 Bacteria 44164
191 Ga0207690_10209873 3300025932 Bacteria 1484
192 Ga0207706_10000322 3300025933 Bacteria 51749
193 Ga0207709_10309790 3300025935 Bacteria 1177
194 Ga0207669_10238703 3300025937 Bacteria 1346
195 Ga0207704_10000192 3300025938 Bacteria 32150
196 Ga0207661_10005171 3300025944 Bacteria 9175
197 Ga0207667_10000430 3300025949 Bacteria 56466
198 Ga0207667_10000439 3300025949 Bacteria 55776
199 Ga0207667_10022210 3300025949 Bacteria 7016
200 Ga0207667_10113840 3300025949 Bacteria 2789
201 Ga0207667_10507617 3300025949 Bacteria 1222
202 Ga0207651_10708239 3300025960 Bacteria 887
203 Ga0207639_10003435 3300026041 Bacteria 10657
204 Ga0207639_10060927 3300026041 Unclassified 2912
205 Ga0207639_10892670 3300026041 Bacteria 831
206 Ga0207702_10000165 3300026078 Bacteria 79066
207 Ga0207702_10003128 3300026078 Bacteria 15352
208 Ga0207702_10077155 3300026078 Bacteria 2881
209 Ga0207702_10126314 3300026078 Bacteria 2297
210 Ga0207648_10000287 3300026089 Bacteria 54959
211 Ga0207683_10019900 3300026121 Bacteria 5736
212 Ga0207698_10007255 3300026142 Bacteria 6945
213 Ga0268266_10000018 3300028379 Bacteria 569141
214 Ga0268264_10037512 3300028381 Bacteria 3996
215 Ga0265334_10059659 3300028573 Unclassified 1441
216 Ga0307517_10000929 3300028786 Bacteria 49793
217 Ga0307517_10001574 3300028786 Bacteria 38060
218 Ga0307515_10004006 3300028794 Bacteria 30751
219 Ga0307515_10009296 3300028794 Bacteria 19016
220 Ga0307515_10061972 3300028794 Bacteria 5293
221 Ga0265338_10217381 3300028800 Unclassified 1430
222 Ga0265324_10033008 3300029957 Unclassified 1808
223 Ga0307511_10000046 3300030521 Bacteria 100284
224 Ga0265314_10044852 3300031711 Bacteria 3130
225 Ga0307412_10000049 3300031911 Bacteria 151588
226 Ga0307414_10000142 3300032004 Bacteria 48979
227 Ga0307507_10002519 3300033179 Bacteria 38243
228 Ga0395899_0000177 3300037312 Bacteria 94226
229 Ga0395899_0036289 3300037312 Bacteria 3698
230 Ga0395899_0053460 3300037312 Bacteria 2990
231 Ga0395899_0166096 3300037312 Bacteria 1557
232 Ga0395899_0218124 3300037312 Unclassified 1322
233 Ga0395900_0001123 3300037418 Bacteria 33875
234 Ga0395900_0005801 3300037418 Bacteria 12900
235 Ga0395900_0032655 3300037418 Bacteria 5353
236 Ga0395900_0076582 3300037418 Bacteria 3437
237 Ga0395900_0112314 3300037418 Bacteria 2798
238 Ga0395900_0129072 3300037418 Bacteria 2591
239 Ga0395898_0012861 3300037466 Bacteria 8633
240 Ga0395898_0225870 3300037466 Bacteria 1786
241 Ga0395898_0489886 3300037466 Unclassified 1169
242 Ga0395905_0004015 3300037471 Bacteria 15448
243 Ga0395905_0005280 3300037471 Bacteria 13209
244 Ga0395901_0004466 3300038443 Bacteria 14115
245 Ga0395901_0093566 3300038443 Unclassified 3147
246 Ga0395901_0146251 3300038443 Bacteria 2484
247 Ga0395901_0184585 3300038443 Unclassified 2187
248 Ga0395901_0663555 3300038443 Bacteria 1044
249 Ga0436361_1156458 3300039447 Bacteria 9894
250 Ga0451577_0000112 3300042876 Bacteria 177581
251 Ga0451577_0031815 3300042876 Bacteria 4759
252 Ga0451577_0159003 3300042876 Bacteria 2034
253 Ga0453683_0016850 3300044673 Unclassified 4710
254 Ga0453684_0000398 3300044712 Bacteria 178891
255 Ga0453684_0086799 3300044712 Bacteria 3881
256 Ga0453684_0476931 3300044712 Bacteria 1384
257 Ga0451576_0000150 3300045051 Bacteria 177361
258 Ga0451576_0056185 3300045051 Bacteria 4117
259 Ga0451576_0418493 3300045051 Bacteria 1406
260 Ga0495629_0111757 3300046459 Bacteria 1905
261 Ga0495650_0000098 3300046471 Bacteria 215716
262 Ga0495580_0122560 3300046472 Unclassified 1805
263 Ga0495662_0260232 3300046476 Unclassified 854
264 Ga0495585_0000029 3300046492 Bacteria 145822
265 Ga0495585_0000330 3300046492 Bacteria 46311
266 Ga0495596_0015686 3300046500 Bacteria 3165
267 Ga0495583_0063314 3300046506 Bacteria 1644
268 Ga0495610_0001345 3300046512 Bacteria 21797
269 Ga0495616_0000972 3300046513 Bacteria 20531
270 Ga0495628_0366524 3300046516 Bacteria 1057
271 Ga0495630_0069687 3300046517 Bacteria 2646
272 Ga0495631_0026528 3300046518 Bacteria 2659
273 Ga0495648_0002046 3300046524 Bacteria 19132
274 Ga0495648_0048523 3300046524 Bacteria 2613
275 Ga0495663_0028805 3300046525 Bacteria 1637
276 Ga0495665_0063067 3300046531 Bacteria 1957
277 Ga0495586_0030640 3300046535 Bacteria 2879
278 Ga0495633_0000014 3300046558 Bacteria 261742
279 Ga0495633_0000879 3300046558 Bacteria 25944
280 Ga0495633_0124918 3300046558 Bacteria 1191
281 Ga0495668_0000003 3300046616 Bacteria 695023
282 Ga0495668_0124945 3300046616 Bacteria 1408
283 Ga0495625_0000669 3300046660 Bacteria 48864
284 Ga0495625_0001390 3300046660 Bacteria 29676
285 Ga0495625_0003408 3300046660 Bacteria 15900
286 Ga0495625_0163193 3300046660 Bacteria 1491
287 Ga0495635_0050064 3300046663 Bacteria 2880
288 Ga0495661_0010172 3300046665 Bacteria 6428
289 Ga0495657_0096047 3300046675 Bacteria 1894
290 Ga0495623_0236117 3300046679 Bacteria 1035
291 Ga0495658_0023834 3300046683 Bacteria 3252
292 Ga0495649_0000226 3300046694 Bacteria 49102
293 Ga0495604_0063886 3300047317 Bacteria 2807
294 Ga0495674_0054027 3300047319 Bacteria 3529
295 Ga0495683_0038396 3300047323 Bacteria 2425
296 Ga0495687_008755 3300047443 Bacteria 5749
297 Ga0495687_076577 3300047443 Bacteria 1323
298 Ga0495677_0055975 3300047445 Bacteria 1456
299 Ga0495673_0014365 3300047469 Bacteria 4119
300 Ga0495686_0033182 3300047472 Bacteria 3335
301 Ga0495686_0059289 3300047472 Bacteria 2383
302 Ga0495686_0073669 3300047472 Bacteria 2097
303 Ga0495686_0137408 3300047472 Bacteria 1444
304 Ga0501034_0103464 3300049571 Bacteria 2841
305 Ga0501047_0204611 3300049581 Unclassified 1834
306 Ga0501070_0024601 3300049586 Bacteria 5049
307 Ga0501070_0160889 3300049586 Bacteria 1851
308 Ga0501071_0458604 3300049587 Unclassified 976
309 Ga0501073_0041045 3300049589 Bacteria 3270
310 Ga0501074_0161383 3300049590 Bacteria 1601
311 Ga0501083_0043241 3300049744 Bacteria 3052
312 Ga0501241_020497 3300049758 Bacteria 1216
313 Ga0501044_0075523 3300049823 Bacteria 3422
314 nmdc:mga0k408_14835_c1 3300050493 Bacteria 4300
315 nmdc:mga0k408_158_c1 3300050493 Bacteria 35033
316 nmdc:mga0k408_16_c2 3300050493 Bacteria 101089
317 nmdc:mga0k408_6337_c1 3300050493 Bacteria 6314
318 Ga0500581_061199 3300053089 Bacteria 1907
319 Ga0500646_0030026 3300053090 Bacteria 1490
320 Ga0500583_0032544 3300053092 Unclassified 2301
321 Ga0500651_0000202 3300053093 Bacteria 37847
322 Ga0500569_005263 3300053109 Unclassified 2772
323 Ga0500618_012505 3300053125 Bacteria 2222
324 Ga0500658_0001493 3300053134 Bacteria 9365
325 Ga0500559_0033532 3300053136 Bacteria 2211
326 Ga0500577_0079747 3300053142 Bacteria 1302
327 Ga0500616_0011853 3300053153 Bacteria 5127
328 Ga0500616_0144079 3300053153 Viruses 1110
329 Ga0500622_0001592 3300053156 Bacteria 17863
330 Ga0500633_0016638 3300053160 Bacteria 2139
331 Ga0500633_0058460 3300053160 Bacteria 1351
332 Ga0500634_0037450 3300053161 Bacteria 2638
333 Ga0501084_0164316 3300054114 Bacteria 1873
334 Ga0500661_008164 3300055283 Bacteria 1925
335 2852629240 2852627209 Bacteria 5896285
336 2929241785 2929239360 Bacteria 7745570
337 Ga0068856_100012738
338 SwRhRL2b_contig_3412754
339 JGI24739J22299_10002569
340 JGI25162J39368_1000755
341 JGI25165J46597_1000773
342 rootH1_10000675
343 rootH2_10016295
344 rootH2_10123057
345 rootH2_10182882
346 rootL2_10091364
347 rootL2_10096121
348 rootL2_10183019
349 rootL2_10268629
350 rootH1_10005851
351 rootH1_10030117
352 rootH1_10194405
353 rootH1_10228946
354 Ga0065704_10070217
355 Ga0070658_10000917
356 Ga0070680_100017434
357 Ga0070680_100239788
358 Ga0070682_100014384
359 Ga0070660_100018710
360 Ga0070660_100055890
361 Ga0070660_100081821
362 Ga0070691_10002135
363 Ga0070671_100016893
364 Ga0070673_100004946
365 Ga0070673_100440924
366 Ga0070659_100000203
367 Ga0070659_100062734
368 Ga0070659_100086890
369 Ga0070714_100347204
370 Ga0070662_100159672
371 Ga0070681_10020242
372 Ga0070681_10020966
373 Ga0068867_100000990
374 Ga0070679_100005033
375 Ga0070679_100006085
376 Ga0070679_100052677
377 Ga0070679_100394010
378 Ga0068853_100003509
379 Ga0068853_100034858
380 Ga0068853_100114471
381 Ga0070693_100001351
382 Ga0070665_100000020
383 Ga0070665_100421622
384 Ga0068855_100000091
385 Ga0068855_100145182
386 Ga0068855_100254474
387 Ga0068855_100398484
388 Ga0068855_100404504
389 Ga0068856_100004342
390 Ga0068856_100023052
391 Ga0068852_100001564
392 Ga0068858_100193560
393 Ga0068860_100001827
394 Ga0075366_10000041
395 Ga0075366_10000090
396 Ga0075366_10006346
397 Ga0075366_10017076
398 Ga0097621_100001192
399 Ga0097621_100672535
400 Ga0068871_100000088
401 Ga0068871_100001062
402 Ga0068871_100266215
403 Ga0068865_100001897
404 Ga0105240_10000068
405 Ga0105240_10013501
406 Ga0105240_10066865
407 Ga0105240_10087950
408 Ga0105240_10118453
409 Ga0105240_10135548
410 Ga0105240_10207941
411 Ga0105240_10325997
412 Ga0105240_10350335
413 Ga0105240_10394275
414 Ga0105243_10137516
415 Ga0105241_10000299
416 Ga0105241_10002169
417 Ga0105241_10009258
418 Ga0105241_10300933
419 Ga0105242_10658045
420 Ga0105237_10000703
421 Ga0105237_10000819
422 Ga0105237_10002120
423 Ga0105237_10005753
424 Ga0105237_10062686
425 Ga0105237_10157340
426 Ga0105238_10602109
427 Ga0105239_10000062
428 Ga0105239_10000710
429 Ga0105239_10001181
430 Ga0105239_10003014
431 Ga0105239_10004292
432 Ga0105239_10025098
433 Ga0105239_10048703
434 Ga0105239_10127518
435 Ga0105239_10266772
436 Ga0105239_10401870
437 Ga0105246_10138706
438 Ga0105246_10448570
439 Ga0157373_10000040
440 Ga0157373_10000440
441 Ga0157373_10000978
442 Ga0157371_10000868
443 Ga0157371_10002650
444 Ga0157371_10003623
445 Ga0157371_10042814
446 Ga0157371_10086372
447 Ga0157371_10127622
448 Ga0157371_10512808
449 Ga0157370_10000313
450 Ga0157370_10000775
451 Ga0157370_10014842
452 Ga0157370_10027681
453 Ga0157370_10047565
454 Ga0157370_10306262
455 Ga0157369_10064947
456 Ga0157369_10272085
457 Ga0157374_10008877
458 Ga0157374_10038138
459 Ga0157374_10157416
460 Ga0157374_10219421
461 Ga0157374_10224810
462 Ga0157374_10265158
463 Ga0157374_10618709
464 Ga0157378_10004272
465 Ga0157378_10043734
466 Ga0163162_10000321
467 Ga0163162_10001597
468 Ga0163162_10007807
469 Ga0163162_11615240
470 Ga0157372_10001538
471 Ga0157372_10036181
472 Ga0157372_10047395
473 Ga0157372_10114788
474 Ga0157372_10198461
475 Ga0157372_10343450
476 Ga0157375_10038721
477 Ga0157375_10043913
478 Ga0157377_10095924
479 Ga0157376_10010695
480 Ga0182006_1001021
481 Ga0213872_10043509
482 Ga0207427_100025
483 Ga0209437_100010
484 Ga0209437_100017
485 Ga0209258_100145
486 Ga0209026_1000251
487 Ga0209148_1000177
488 Ga0209233_1000017
489 Ga0209233_1002900
490 Ga0209455_1002123
491 Ga0207647_10000273
492 Ga0207647_10048032
493 Ga0207647_10129990
494 Ga0207647_10202577
495 Ga0207647_10346314
496 Ga0207645_10000413
497 Ga0207705_10000833
498 Ga0207705_10051876
499 Ga0207705_10173863
500 Ga0207654_10001398
501 Ga0207654_10002165
502 Ga0207707_10000467
503 Ga0207707_10012948
504 Ga0207707_10051809
505 Ga0207695_10000131
506 Ga0207695_10003229
507 Ga0207695_10038492
508 Ga0207695_10087079
509 Ga0207695_10208269
510 Ga0207695_10422385
511 Ga0207695_10621205
512 Ga0207671_10001916
513 Ga0207671_10004065
514 Ga0207671_10026865
515 Ga0207671_10029139
516 Ga0207660_10011969
517 Ga0207660_10015898
518 Ga0207657_10037403
519 Ga0207657_10106328
520 Ga0207652_10000160
521 Ga0207652_10007289
522 Ga0207652_10037637
523 Ga0207652_10087292
524 Ga0207694_10612752
525 Ga0207644_10029644
526 Ga0207690_10000212
527 Ga0207690_10209873
528 Ga0207706_10000322
529 Ga0207709_10309790
530 Ga0207669_10238703
531 Ga0207704_10000192
532 Ga0207661_10005171
533 Ga0207667_10000430
534 Ga0207667_10000439
535 Ga0207667_10022210
536 Ga0207667_10113840
537 Ga0207667_10507617
538 Ga0207651_10708239
539 Ga0207639_10003435
540 Ga0207639_10060927
541 Ga0207639_10892670
542 Ga0207702_10000165
543 Ga0207702_10003128
544 Ga0207702_10077155
545 Ga0207702_10126314
546 Ga0207648_10000287
547 Ga0207683_10019900
548 Ga0207698_10007255
549 Ga0268266_10000018
550 Ga0268264_10037512
551 Ga0265334_10059659
552 Ga0307517_10000929
553 Ga0307517_10001574
554 Ga0307515_10004006
555 Ga0307515_10009296
556 Ga0307515_10061972
557 Ga0265338_10217381
558 Ga0265324_10033008
559 Ga0307511_10000046
560 Ga0265314_10044852
561 Ga0307412_10000049
562 Ga0307414_10000142
563 Ga0307507_10002519
564 Ga0395899_0000177
565 Ga0395899_0036289
566 Ga0395899_0053460
567 Ga0395899_0166096
568 Ga0395899_0218124
569 Ga0395900_0001123
570 Ga0395900_0005801
571 Ga0395900_0032655
572 Ga0395900_0076582
573 Ga0395900_0112314
574 Ga0395900_0129072
575 Ga0395898_0012861
576 Ga0395898_0225870
577 Ga0395898_0489886
578 Ga0395905_0004015
579 Ga0395905_0005280
580 Ga0395901_0004466
581 Ga0395901_0093566
582 Ga0395901_0146251
583 Ga0395901_0184585
584 Ga0395901_0663555
585 Ga0436361_1156458
586 Ga0451577_0000112
587 Ga0451577_0031815
588 Ga0451577_0159003
589 Ga0453683_0016850
590 Ga0453684_0000398
591 Ga0453684_0086799
592 Ga0453684_0476931
593 Ga0451576_0000150
594 Ga0451576_0056185
595 Ga0451576_0418493
596 Ga0495629_0111757
597 Ga0495650_0000098
598 Ga0495580_0122560
599 Ga0495662_0260232
600 Ga0495585_0000029
601 Ga0495585_0000330
602 Ga0495596_0015686
603 Ga0495583_0063314
604 Ga0495610_0001345
605 Ga0495616_0000972
606 Ga0495628_0366524
607 Ga0495630_0069687
608 Ga0495631_0026528
609 Ga0495648_0002046
610 Ga0495648_0048523
611 Ga0495663_0028805
612 Ga0495665_0063067
613 Ga0495586_0030640
614 Ga0495633_0000014
615 Ga0495633_0000879
616 Ga0495633_0124918
617 Ga0495668_0000003
618 Ga0495668_0124945
619 Ga0495625_0000669
620 Ga0495625_0001390
621 Ga0495625_0003408
622 Ga0495625_0163193
623 Ga0495635_0050064
624 Ga0495661_0010172
625 Ga0495657_0096047
626 Ga0495623_0236117
627 Ga0495658_0023834
628 Ga0495649_0000226
629 Ga0495604_0063886
630 Ga0495674_0054027
631 Ga0495683_0038396
632 Ga0495687_008755
633 Ga0495687_076577
634 Ga0495677_0055975
635 Ga0495673_0014365
636 Ga0495686_0033182
637 Ga0495686_0059289
638 Ga0495686_0073669
639 Ga0495686_0137408
640 Ga0501034_0103464
641 Ga0501047_0204611
642 Ga0501070_0024601
643 Ga0501070_0160889
644 Ga0501071_0458604
645 Ga0501073_0041045
646 Ga0501074_0161383
647 Ga0501083_0043241
648 Ga0501241_020497
649 Ga0501044_0075523
650 nmdc:mga0k408_14835_c1
651 nmdc:mga0k408_158_c1
652 nmdc:mga0k408_16_c2
653 nmdc:mga0k408_6337_c1
654 Ga0500581_061199
655 Ga0500646_0030026
656 Ga0500583_0032544
657 Ga0500651_0000202
658 Ga0500569_005263
659 Ga0500618_012505
660 Ga0500658_0001493
661 Ga0500559_0033532
662 Ga0500577_0079747
663 Ga0500616_0011853
664 Ga0500616_0144079
665 Ga0500622_0001592
666 Ga0500633_0016638
667 Ga0500633_0058460
668 Ga0500634_0037450
669 Ga0501084_0164316
670 Ga0500661_008164
671 2852629240
672 2929241785

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

99

281

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h0j-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9846 1 228
5h0k-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9843 1 228
5h0j-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9719 1 228
5h0k-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9717 1 228
1oe6-assembly1.cif.gz_A xenopus smug1, an anti-mutator uracil-dna glycosylase 0.7389 4 205
ID Description Score Start End Superfamily
5h98A00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7525 4 205 3.40.470.10
1oe5B00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7481 3 227 3.40.470.10
1oe5B00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7307 3 227 3.40.470.10
af_Q9VEM1_36_278_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7038 4 227 3.40.470.10
af_Q9VEM1_36_278_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.6848 4 227 3.40.470.10
ID Description Score Start End GO Terms
AF-A0A0S7BNH8-F1-model_v4 Uracil-DNA glycosylase-like domain-containing protein 0.996 2 227
AF-A0A7U9XKH4-F1-model_v4 DUF4918 domain-containing protein 0.9959 122 227
AF-A0A3B9ZUH5-F1-model_v4 DUF4918 domain-containing protein 0.9947 62 230
AF-A0A6C1QFC1-F1-model_v4 SMUG2 DNA glycosylase family protein 0.994 1 226
AF-A0A7C1RV57-F1-model_v4 SMUG2 DNA glycosylase family protein 0.9933 3 226

Map