F412650

General Info

Members Datasets Scaffolds Average Seq Length
336 207 672 378

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10009260|Ga0105238_100092604
Length 417
Sequence MEKHVPESTVQNRPSSRRLRIVGGVALLTAAVLASGGIWARLQHDGALKQRVEVDATPTVSVIEPGHGDARQELVLPSNIEAFYDAPIYARVPGYLKKWYVDIGAHVKAGDLLAEIETPELDQQLQQARADLATAVAKQKLAELTSRRWQNMLASTSVSKQEADEKKGDFEAKTAAVAAEGANVQRLMALSSFKRIVAPFDGTVTARRTDIGALINAGSNGGASQELFRVADTRKLRVYVEVPQTYANLVKVGMQAQLNLPESPGHSAAATVVSTADAITKSSRTLLVQLEADNAQGSLIAGSYADAHFDLPSTPGVLQLPVTALLFRQRGLEVATLGPGDKVILKKVQLGRDFGTKVEVVSGLDANDQVIDSPPDWLAQGDAVCAAKSKKIAAERGAKDPKALAAGAPAESGEQPR

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
6 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
111 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
129 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
140 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
141 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
153 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
180 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
181 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
182 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
183 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
186 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
187 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
188 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
189 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
190 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
191 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
192 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
193 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
194 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
195 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
196 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
197 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
198 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
199 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
200 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
201 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
202 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
203 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
204 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
205 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
206 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
207 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.56
Metatranscriptomes 0
Isolates 7.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.23
Nodule 5.95
Rhizoplane 1.49
Rhizosphere 77.08
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10009260 3300009551 Bacteria 9855
2 rootH1_10047622 3300003323 Bacteria 6302
3 Ga0055526_1025902 3300003771 Bacteria 1869
4 Ga0055537_1000027 3300003773 Bacteria 102244
5 Ga0055534_1000019 3300003784 Bacteria 137920
6 Ga0055528_1000055 3300003790 Bacteria 89917
7 Ga0065165_1001371 3300005262 Bacteria 26814
8 Ga0070666_10065393 3300005335 Bacteria 2468
9 Ga0068868_100094253 3300005338 Bacteria 2415
10 Ga0068868_100245838 3300005338 Bacteria 1504
11 Ga0070661_100047315 3300005344 Bacteria 3147
12 Ga0070667_100000084 3300005367 Bacteria 118027
13 Ga0070667_100029407 3300005367 Bacteria 4577
14 Ga0070709_10027753 3300005434 Bacteria 3369
15 Ga0070714_100084798 3300005435 Bacteria 2765
16 Ga0070713_100003232 3300005436 Bacteria 10735
17 Ga0070713_100032708 3300005436 Bacteria 4157
18 Ga0070710_10018415 3300005437 Bacteria 3592
19 Ga0070711_100037200 3300005439 Bacteria 3264
20 Ga0070711_100038835 3300005439 Bacteria 3203
21 Ga0070700_100200608 3300005441 Bacteria 1401
22 Ga0070663_100000567 3300005455 Bacteria 19726
23 Ga0070663_100032052 3300005455 Bacteria 3618
24 Ga0070662_100044390 3300005457 Bacteria 3184
25 Ga0068867_100031046 3300005459 Bacteria 3856
26 Ga0070707_100007829 3300005468 Bacteria 9921
27 Ga0070707_100187616 3300005468 Unclassified 2016
28 Ga0070699_100036086 3300005518 Bacteria 4276
29 Ga0070697_100013335 3300005536 Bacteria 6446
30 Ga0068853_100006536 3300005539 Bacteria 9279
31 Ga0070665_100000715 3300005548 Bacteria 44234
32 Ga0070665_100034971 3300005548 Bacteria 5054
33 Ga0068855_100113540 3300005563 Bacteria 3107
34 Ga0068855_100289882 3300005563 Bacteria 1815
35 Ga0068854_100012929 3300005578 Bacteria 5467
36 Ga0068856_100143206 3300005614 Bacteria 2398
37 Ga0068851_10007958 3300005834 Bacteria 4888
38 Ga0068863_100212516 3300005841 Bacteria 1863
39 Ga0068858_100001923 3300005842 Bacteria 21169
40 Ga0070717_10054163 3300006028 Bacteria 3308
41 Ga0075365_10000184 3300006038 Bacteria 20431
42 Ga0075368_10006336 3300006042 Bacteria 4127
43 Ga0075364_10030107 3300006051 Bacteria 3483
44 Ga0070715_10066094 3300006163 Bacteria 1602
45 Ga0070716_100014398 3300006173 Bacteria 4050
46 Ga0070712_100039812 3300006175 Bacteria 3218
47 Ga0070712_100064757 3300006175 Bacteria 2593
48 Ga0075367_10000371 3300006178 Bacteria 16211
49 Ga0075367_10039933 3300006178 Bacteria 2738
50 Ga0075369_10000261 3300006186 Bacteria 15565
51 Ga0097621_100008591 3300006237 Bacteria 7363
52 Ga0075370_10004292 3300006353 Bacteria 6907
53 Ga0068871_100032930 3300006358 Bacteria 4099
54 Ga0068871_100071076 3300006358 Bacteria 2862
55 Ga0068865_100006072 3300006881 Bacteria 7364
56 Ga0068865_100066383 3300006881 Bacteria 2545
57 Ga0099795_10003065 3300007788 Bacteria 4076
58 Ga0099795_10006046 3300007788 Bacteria 3271
59 Ga0105240_10018196 3300009093 Bacteria 9445
60 Ga0105240_10042969 3300009093 Bacteria 5756
61 Ga0105240_10149029 3300009093 Bacteria 2788
62 Ga0105240_10202710 3300009093 Bacteria 2324
63 Ga0105241_10001800 3300009174 Bacteria 16269
64 Ga0105241_10049013 3300009174 Bacteria 3215
65 Ga0105241_10053913 3300009174 Bacteria 3077
66 Ga0105242_10016411 3300009176 Bacteria 5756
67 Ga0105242_10022722 3300009176 Bacteria 4937
68 Ga0105248_10000429 3300009177 Bacteria 47562
69 Ga0105248_10139810 3300009177 Bacteria 2731
70 Ga0105237_10000388 3300009545 Bacteria 62620
71 Ga0105237_10016019 3300009545 Bacteria 7796
72 Ga0105238_10003439 3300009551 Bacteria 15768
73 Ga0105238_10014250 3300009551 Bacteria 8038
74 Ga0105249_10000170 3300009553 Bacteria 76693
75 Ga0105249_10112258 3300009553 Bacteria 2578
76 Ga0105239_10018267 3300010375 Bacteria 7753
77 Ga0105239_10077466 3300010375 Bacteria 3658
78 Ga0105239_10103538 3300010375 Bacteria 3151
79 Ga0105239_10141878 3300010375 Bacteria 2678
80 Ga0105239_10316061 3300010375 Bacteria 1761
81 Ga0157369_10000148 3300013105 Bacteria 100073
82 Ga0157369_10129940 3300013105 Bacteria 2670
83 Ga0157378_10011545 3300013297 Bacteria 7735
84 Ga0163162_10009169 3300013306 Bacteria 9627
85 Ga0157375_10001038 3300013308 Bacteria 23982
86 Ga0157375_10006205 3300013308 Bacteria 10407
87 Ga0157376_10027405 3300014969 Bacteria 4516
88 Ga0157376_10054815 3300014969 Bacteria 3326
89 Ga0213872_10001766 3300021361 Bacteria 13542
90 Ga0213872_10002101 3300021361 Bacteria 12005
91 Ga0213872_10012677 3300021361 Bacteria 3961
92 Ga0213872_10014934 3300021361 Bacteria 3614
93 Ga0213872_10021393 3300021361 Bacteria 2978
94 Ga0213876_10006331 3300021384 Bacteria 6453
95 Ga0209565_1000017 3300025263 Bacteria 462438
96 Ga0209673_1000007 3300025273 Bacteria 634477
97 Ga0209675_1000009 3300025291 Bacteria 562872
98 Ga0209564_1000036 3300025295 Bacteria 423455
99 Ga0209564_1000055 3300025295 Bacteria 343782
100 Ga0209256_1000091 3300025299 Bacteria 210945
101 Ga0207656_10031069 3300025321 Bacteria 2210
102 Ga0207680_10004599 3300025903 Bacteria 6549
103 Ga0207680_10050250 3300025903 Bacteria 2486
104 Ga0207647_10000307 3300025904 Bacteria 40415
105 Ga0207695_10003615 3300025913 Bacteria 21630
106 Ga0207695_10006667 3300025913 Bacteria 14900
107 Ga0207695_10027505 3300025913 Bacteria 6331
108 Ga0207695_10109152 3300025913 Bacteria 2749
109 Ga0207671_10001833 3300025914 Bacteria 23703
110 Ga0207671_10004644 3300025914 Bacteria 13008
111 Ga0207671_10009520 3300025914 Bacteria 8113
112 Ga0207693_10014206 3300025915 Bacteria 6408
113 Ga0207693_10053504 3300025915 Bacteria 3167
114 Ga0207693_10134140 3300025915 Bacteria 1946
115 Ga0207663_10020949 3300025916 Bacteria 3712
116 Ga0207663_10059176 3300025916 Bacteria 2422
117 Ga0207646_10008001 3300025922 Bacteria 10659
118 Ga0207694_10001145 3300025924 Bacteria 23004
119 Ga0207694_10002332 3300025924 Bacteria 15523
120 Ga0207694_10019102 3300025924 Bacteria 5180
121 Ga0207694_10060402 3300025924 Bacteria 2950
122 Ga0207650_10013247 3300025925 Bacteria 5705
123 Ga0207700_10030316 3300025928 Bacteria 3829
124 Ga0207700_10049629 3300025928 Bacteria 3123
125 Ga0207700_10150357 3300025928 Bacteria 1923
126 Ga0207700_10251637 3300025928 Bacteria 1509
127 Ga0207664_10061699 3300025929 Bacteria 2992
128 Ga0207706_10001643 3300025933 Bacteria 22133
129 Ga0207686_10014608 3300025934 Bacteria 4376
130 Ga0207686_10036592 3300025934 Bacteria 2956
131 Ga0207691_10017552 3300025940 Bacteria 6783
132 Ga0207711_10008906 3300025941 Bacteria 8391
133 Ga0207712_10000264 3300025961 Bacteria 50896
134 Ga0207658_10000214 3300025986 Bacteria 60680
135 Ga0207658_10014009 3300025986 Bacteria 5488
136 Ga0207677_10029529 3300026023 Bacteria 3486
137 Ga0207703_10000734 3300026035 Bacteria 32244
138 Ga0207639_10001752 3300026041 Bacteria 14616
139 Ga0207639_10008609 3300026041 Bacteria 7001
140 Ga0207678_10001491 3300026067 Bacteria 21445
141 Ga0207702_10085914 3300026078 Bacteria 2742
142 Ga0207641_10190917 3300026088 Bacteria 1883
143 Ga0207648_10035340 3300026089 Bacteria 4402
144 Ga0207648_10041641 3300026089 Bacteria 4034
145 Ga0209179_1001763 3300027512 Bacteria 2755
146 Ga0209588_1002105 3300027671 Bacteria 5374
147 Ga0209813_10001819 3300027866 Bacteria 4803
148 Ga0268266_10000006 3300028379 Bacteria 1410021
149 Ga0268266_10015147 3300028379 Bacteria 6621
150 Ga0265327_10001048 3300031251 Bacteria 38688
151 Ga0307509_10018516 3300031507 Bacteria 7984
152 Ga0307508_10010723 3300031616 Bacteria 8380
153 Ga0307508_10111580 3300031616 Bacteria 2334
154 Ga0373937_0007288 3300036401 Bacteria 9573
155 Ga0373937_0086577 3300036401 Bacteria 2899
156 Ga0436365_0194972 3300039437 Bacteria 39396
157 Ga0436365_0956623 3300039437 Bacteria 6765
158 Ga0436365_1914035 3300039437 Bacteria 1769
159 Ga0436360_1023117 3300039438 Bacteria 1745
160 Ga0436361_0104390 3300039447 Bacteria 77891
161 Ga0436361_0106092 3300039447 Unclassified 2376
162 Ga0436361_0138682 3300039447 Bacteria 10015
163 Ga0436361_0142745 3300039447 Bacteria 26174
164 Ga0436361_0316582 3300039447 Bacteria 2686
165 Ga0436361_0424537 3300039447 Bacteria 3227
166 Ga0436361_0537861 3300039447 Bacteria 9357
167 Ga0436361_0570847 3300039447 Bacteria 10873
168 Ga0436361_0746836 3300039447 Bacteria 3715
169 Ga0436361_0803786 3300039447 Bacteria 1739
170 Ga0436361_0808627 3300039447 Bacteria 2758
171 Ga0436361_1106567 3300039447 Bacteria 30825
172 Ga0436361_1209269 3300039447 Bacteria 1861
173 Ga0436362_0755454 3300039453 Unclassified 2396
174 Ga0466966_0101907 3300044684 Bacteria 1775
175 Ga0466959_0060088 3300045049 Bacteria 2766
176 Ga0466967_0418719 3300045976 Bacteria 1305
177 Ga0495603_0043944 3300046455 Bacteria 2667
178 Ga0495603_0067579 3300046455 Bacteria 2104
179 Ga0495591_006693 3300046458 Bacteria 5034
180 Ga0495591_021453 3300046458 Bacteria 2107
181 Ga0495629_0015671 3300046459 Bacteria 5442
182 Ga0495650_0001976 3300046471 Bacteria 18028
183 Ga0495582_0008897 3300046473 Bacteria 5540
184 Ga0495605_0000007 3300046474 Bacteria 358289
185 Ga0495605_0007258 3300046474 Bacteria 6292
186 Ga0495605_0024463 3300046474 Bacteria 3159
187 Ga0495605_0040529 3300046474 Bacteria 2324
188 Ga0495639_0032611 3300046475 Bacteria 2324
189 Ga0495584_0012939 3300046491 Bacteria 4259
190 Ga0495584_0082474 3300046491 Bacteria 1618
191 Ga0495585_0002143 3300046492 Bacteria 14401
192 Ga0495585_0073963 3300046492 Bacteria 1854
193 Ga0495596_0001910 3300046500 Bacteria 11567
194 Ga0495596_0018857 3300046500 Bacteria 2840
195 Ga0495607_0025256 3300046501 Bacteria 3697
196 Ga0495607_0074971 3300046501 Bacteria 1876
197 Ga0495583_0000007 3300046506 Bacteria 434661
198 Ga0495606_0013123 3300046507 Bacteria 6578
199 Ga0495606_0137584 3300046507 Bacteria 1445
200 Ga0495610_0003776 3300046512 Bacteria 11571
201 Ga0495610_0023688 3300046512 Bacteria 3330
202 Ga0495616_0013324 3300046513 Bacteria 4642
203 Ga0495616_0072726 3300046513 Bacteria 1660
204 Ga0495630_0064658 3300046517 Bacteria 2749
205 Ga0495631_0010803 3300046518 Bacteria 4511
206 Ga0495631_0011994 3300046518 Bacteria 4247
207 Ga0495631_0063782 3300046518 Bacteria 1595
208 Ga0495632_0020468 3300046519 Bacteria 3581
209 Ga0495637_0002654 3300046520 Bacteria 9783
210 Ga0495643_0060688 3300046522 Bacteria 2007
211 Ga0495648_0000160 3300046524 Bacteria 80523
212 Ga0495648_0000865 3300046524 Bacteria 31943
213 Ga0495648_0008583 3300046524 Bacteria 8022
214 Ga0495648_0042001 3300046524 Bacteria 2881
215 Ga0495648_0049479 3300046524 Bacteria 2576
216 Ga0495648_0050413 3300046524 Bacteria 2543
217 Ga0495642_0001896 3300046528 Bacteria 8912
218 Ga0495642_0016282 3300046528 Bacteria 2896
219 Ga0495654_0000504 3300046530 Bacteria 31900
220 Ga0495654_0028692 3300046530 Bacteria 2843
221 Ga0495654_0103997 3300046530 Bacteria 1303
222 Ga0495665_0052980 3300046531 Bacteria 2147
223 Ga0495587_0093228 3300046536 Bacteria 1739
224 Ga0495609_0000004 3300046538 Bacteria 697346
225 Ga0495609_0005805 3300046538 Bacteria 6405
226 Ga0495609_0016282 3300046538 Bacteria 3464
227 Ga0495597_0000189 3300046542 Bacteria 55865
228 Ga0495597_0006822 3300046542 Bacteria 5868
229 Ga0495645_0024339 3300046543 Bacteria 4393
230 Ga0495622_0001121 3300046557 Bacteria 14019
231 Ga0495622_0042148 3300046557 Bacteria 2122
232 Ga0495633_0000135 3300046558 Bacteria 97871
233 Ga0495633_0001858 3300046558 Bacteria 15505
234 Ga0495633_0026571 3300046558 Bacteria 2839
235 Ga0495668_0000018 3300046616 Bacteria 417480
236 Ga0495668_0020771 3300046616 Bacteria 3773
237 Ga0495668_0068529 3300046616 Bacteria 1951
238 Ga0495611_0052170 3300046648 Bacteria 1844
239 Ga0495661_0000009 3300046665 Bacteria 291327
240 Ga0495661_0001045 3300046665 Bacteria 24545
241 Ga0495661_0010655 3300046665 Bacteria 6263
242 Ga0495588_0013764 3300046674 Bacteria 3859
243 Ga0495647_0058516 3300046681 Bacteria 1515
244 Ga0495658_0016180 3300046683 Bacteria 3839
245 Ga0495669_0000013 3300046684 Bacteria 151423
246 Ga0495613_0019128 3300046689 Bacteria 5105
247 Ga0495670_0000052 3300046691 Bacteria 63490
248 Ga0495670_0005899 3300046691 Bacteria 5997
249 Ga0495670_0011878 3300046691 Bacteria 4285
250 Ga0495649_0009698 3300046694 Bacteria 5706
251 Ga0495649_0018757 3300046694 Bacteria 3886
252 Ga0495589_0000227 3300046794 Bacteria 47488
253 Ga0495589_0000495 3300046794 Bacteria 28008
254 Ga0495589_0032242 3300046794 Bacteria 2634
255 Ga0495589_0100469 3300046794 Bacteria 1400
256 Ga0495660_0000525 3300046810 Bacteria 31318
257 Ga0495660_0005417 3300046810 Bacteria 7638
258 Ga0495672_0005793 3300047320 Bacteria 9708
259 Ga0495672_0014734 3300047320 Bacteria 5337
260 Ga0495676_0000029 3300047321 Bacteria 140281
261 Ga0495683_0000004 3300047323 Bacteria 321136
262 Ga0495683_0046977 3300047323 Bacteria 2166
263 Ga0495687_000007 3300047443 Bacteria 552679
264 Ga0495677_0001427 3300047445 Bacteria 9584
265 Ga0495679_000465 3300047446 Bacteria 29548
266 Ga0495679_013847 3300047446 Bacteria 3009
267 Ga0495673_0026678 3300047469 Bacteria 2758
268 Ga0495681_0001808 3300047470 Bacteria 15724
269 Ga0495681_0012717 3300047470 Bacteria 4929
270 Ga0495681_0012771 3300047470 Bacteria 4915
271 Ga0495684_0086189 3300047471 Unclassified 2381
272 Ga0495686_0000015 3300047472 Bacteria 471703
273 Ga0495686_0000407 3300047472 Bacteria 68110
274 Ga0495626_0007014 3300048091 Bacteria 6329
275 Ga0495626_0022062 3300048091 Bacteria 3148
276 Ga0495626_0070781 3300048091 Bacteria 1568
277 Ga0495626_0090430 3300048091 Bacteria 1346
278 Ga0496103_0062642 3300048906 Bacteria 2315
279 Ga0496104_0000017 3300048907 Bacteria 325877
280 Ga0496105_0000009 3300048908 Bacteria 325734
281 Ga0496115_0000085 3300048918 Bacteria 86743
282 Ga0496115_0212651 3300048918 Unclassified 1597
283 Ga0496117_0021776 3300048920 Bacteria 5172
284 Ga0496117_0155634 3300048920 Bacteria 1346
285 Ga0496118_0000715 3300048921 Bacteria 53625
286 Ga0496122_0004439 3300048925 Bacteria 17411
287 Ga0496123_0003530 3300048926 Bacteria 17401
288 Ga0496123_0032310 3300048926 Bacteria 3792
289 Ga0496126_0000033 3300048929 Bacteria 368851
290 Ga0496126_0073072 3300048929 Bacteria 3050
291 Ga0495678_000014 3300049459 Bacteria 313755
292 Ga0495678_005612 3300049459 Bacteria 6865
293 Ga0495682_0000038 3300049460 Bacteria 120212
294 Ga0501047_0091330 3300049581 Bacteria 2923
295 Ga0501079_0074979 3300049741 Bacteria 2616
296 Ga0501083_0132250 3300049744 Bacteria 1635
297 Ga0501035_0190743 3300049822 Bacteria 1762
298 nmdc:mga0yw44_488_c1 3300050492 Bacteria 14132
299 nmdc:mga06z11_264_c1 3300050494 Bacteria 20474
300 nmdc:mga06z11_39097_c1 3300050494 Bacteria 2359
301 nmdc:mga04h51_1955_c1 3300050495 Bacteria 4803
302 nmdc:mga07m45_648_c2 3300050496 Bacteria 14160
303 nmdc:mga0n895_29188_c1 3300050512 Bacteria 5257
304 nmdc:mga0rr50_66491_c1 3300050513 Bacteria 2735
305 nmdc:mga0sz30_534_c1 3300050516 Bacteria 14152
306 Ga0500635_0009592 3300053080 Bacteria 2691
307 Ga0500643_005034 3300053087 Bacteria 5786
308 Ga0500646_0028443 3300053090 Bacteria 1526
309 Ga0500597_000225 3300053120 Bacteria 11664
310 Ga0500559_0009641 3300053136 Bacteria 4169
311 Ga0500637_0020084 3300053178 Bacteria 3612
312 2746089960 2744054900 Bacteria 8399525
313 2746095512 2744054901 Bacteria 8397047
314 2874632341 2874628541 Bacteria 8630250
315 2935916470 2935908558 Bacteria 8568796
316 2935925653 2935916978 Bacteria 9113783
317 2935933955 2935926038 Bacteria 8601059
318 2935942493 2935934488 Bacteria 8602579
319 2935950933 2935942939 Bacteria 8599779
320 2935959420 2935951376 Bacteria 8602333
321 2935964354 2935959822 Bacteria 7869783
322 2935975487 2935967501 Bacteria 8603075
323 2935981885 2935975950 Bacteria 8347125
324 2935983478 2935975950 Bacteria 8347125
325 641334521 641228493 Bacteria 3999591
326 643390967 643348555 Bacteria 3914947
327 8016631211 8016630954 Bacteria 9217207
328 8019625913 8019619141 Bacteria 9218857
329 8019629631 8019629233 Bacteria 8687553
330 8019639794 8019638758 Bacteria 9062356
331 8019648324 8019638758 Bacteria 9062356
332 8019659720 8019659431 Bacteria 8577854
333 8019667825 8019659431 Bacteria 8577854
334 8019669232 8019668869 Bacteria 8791617
335 8019678302 8019678201 Bacteria 8863603
336 8019691629 8019687851 Bacteria 8712826
337 Ga0105238_10009260
338 rootH1_10047622
339 Ga0055526_1025902
340 Ga0055537_1000027
341 Ga0055534_1000019
342 Ga0055528_1000055
343 Ga0065165_1001371
344 Ga0070666_10065393
345 Ga0068868_100094253
346 Ga0068868_100245838
347 Ga0070661_100047315
348 Ga0070667_100000084
349 Ga0070667_100029407
350 Ga0070709_10027753
351 Ga0070714_100084798
352 Ga0070713_100003232
353 Ga0070713_100032708
354 Ga0070710_10018415
355 Ga0070711_100037200
356 Ga0070711_100038835
357 Ga0070700_100200608
358 Ga0070663_100000567
359 Ga0070663_100032052
360 Ga0070662_100044390
361 Ga0068867_100031046
362 Ga0070707_100007829
363 Ga0070707_100187616
364 Ga0070699_100036086
365 Ga0070697_100013335
366 Ga0068853_100006536
367 Ga0070665_100000715
368 Ga0070665_100034971
369 Ga0068855_100113540
370 Ga0068855_100289882
371 Ga0068854_100012929
372 Ga0068856_100143206
373 Ga0068851_10007958
374 Ga0068863_100212516
375 Ga0068858_100001923
376 Ga0070717_10054163
377 Ga0075365_10000184
378 Ga0075368_10006336
379 Ga0075364_10030107
380 Ga0070715_10066094
381 Ga0070716_100014398
382 Ga0070712_100039812
383 Ga0070712_100064757
384 Ga0075367_10000371
385 Ga0075367_10039933
386 Ga0075369_10000261
387 Ga0097621_100008591
388 Ga0075370_10004292
389 Ga0068871_100032930
390 Ga0068871_100071076
391 Ga0068865_100006072
392 Ga0068865_100066383
393 Ga0099795_10003065
394 Ga0099795_10006046
395 Ga0105240_10018196
396 Ga0105240_10042969
397 Ga0105240_10149029
398 Ga0105240_10202710
399 Ga0105241_10001800
400 Ga0105241_10049013
401 Ga0105241_10053913
402 Ga0105242_10016411
403 Ga0105242_10022722
404 Ga0105248_10000429
405 Ga0105248_10139810
406 Ga0105237_10000388
407 Ga0105237_10016019
408 Ga0105238_10003439
409 Ga0105238_10014250
410 Ga0105249_10000170
411 Ga0105249_10112258
412 Ga0105239_10018267
413 Ga0105239_10077466
414 Ga0105239_10103538
415 Ga0105239_10141878
416 Ga0105239_10316061
417 Ga0157369_10000148
418 Ga0157369_10129940
419 Ga0157378_10011545
420 Ga0163162_10009169
421 Ga0157375_10001038
422 Ga0157375_10006205
423 Ga0157376_10027405
424 Ga0157376_10054815
425 Ga0213872_10001766
426 Ga0213872_10002101
427 Ga0213872_10012677
428 Ga0213872_10014934
429 Ga0213872_10021393
430 Ga0213876_10006331
431 Ga0209565_1000017
432 Ga0209673_1000007
433 Ga0209675_1000009
434 Ga0209564_1000036
435 Ga0209564_1000055
436 Ga0209256_1000091
437 Ga0207656_10031069
438 Ga0207680_10004599
439 Ga0207680_10050250
440 Ga0207647_10000307
441 Ga0207695_10003615
442 Ga0207695_10006667
443 Ga0207695_10027505
444 Ga0207695_10109152
445 Ga0207671_10001833
446 Ga0207671_10004644
447 Ga0207671_10009520
448 Ga0207693_10014206
449 Ga0207693_10053504
450 Ga0207693_10134140
451 Ga0207663_10020949
452 Ga0207663_10059176
453 Ga0207646_10008001
454 Ga0207694_10001145
455 Ga0207694_10002332
456 Ga0207694_10019102
457 Ga0207694_10060402
458 Ga0207650_10013247
459 Ga0207700_10030316
460 Ga0207700_10049629
461 Ga0207700_10150357
462 Ga0207700_10251637
463 Ga0207664_10061699
464 Ga0207706_10001643
465 Ga0207686_10014608
466 Ga0207686_10036592
467 Ga0207691_10017552
468 Ga0207711_10008906
469 Ga0207712_10000264
470 Ga0207658_10000214
471 Ga0207658_10014009
472 Ga0207677_10029529
473 Ga0207703_10000734
474 Ga0207639_10001752
475 Ga0207639_10008609
476 Ga0207678_10001491
477 Ga0207702_10085914
478 Ga0207641_10190917
479 Ga0207648_10035340
480 Ga0207648_10041641
481 Ga0209179_1001763
482 Ga0209588_1002105
483 Ga0209813_10001819
484 Ga0268266_10000006
485 Ga0268266_10015147
486 Ga0265327_10001048
487 Ga0307509_10018516
488 Ga0307508_10010723
489 Ga0307508_10111580
490 Ga0373937_0007288
491 Ga0373937_0086577
492 Ga0436365_0194972
493 Ga0436365_0956623
494 Ga0436365_1914035
495 Ga0436360_1023117
496 Ga0436361_0104390
497 Ga0436361_0106092
498 Ga0436361_0138682
499 Ga0436361_0142745
500 Ga0436361_0316582
501 Ga0436361_0424537
502 Ga0436361_0537861
503 Ga0436361_0570847
504 Ga0436361_0746836
505 Ga0436361_0803786
506 Ga0436361_0808627
507 Ga0436361_1106567
508 Ga0436361_1209269
509 Ga0436362_0755454
510 Ga0466966_0101907
511 Ga0466959_0060088
512 Ga0466967_0418719
513 Ga0495603_0043944
514 Ga0495603_0067579
515 Ga0495591_006693
516 Ga0495591_021453
517 Ga0495629_0015671
518 Ga0495650_0001976
519 Ga0495582_0008897
520 Ga0495605_0000007
521 Ga0495605_0007258
522 Ga0495605_0024463
523 Ga0495605_0040529
524 Ga0495639_0032611
525 Ga0495584_0012939
526 Ga0495584_0082474
527 Ga0495585_0002143
528 Ga0495585_0073963
529 Ga0495596_0001910
530 Ga0495596_0018857
531 Ga0495607_0025256
532 Ga0495607_0074971
533 Ga0495583_0000007
534 Ga0495606_0013123
535 Ga0495606_0137584
536 Ga0495610_0003776
537 Ga0495610_0023688
538 Ga0495616_0013324
539 Ga0495616_0072726
540 Ga0495630_0064658
541 Ga0495631_0010803
542 Ga0495631_0011994
543 Ga0495631_0063782
544 Ga0495632_0020468
545 Ga0495637_0002654
546 Ga0495643_0060688
547 Ga0495648_0000160
548 Ga0495648_0000865
549 Ga0495648_0008583
550 Ga0495648_0042001
551 Ga0495648_0049479
552 Ga0495648_0050413
553 Ga0495642_0001896
554 Ga0495642_0016282
555 Ga0495654_0000504
556 Ga0495654_0028692
557 Ga0495654_0103997
558 Ga0495665_0052980
559 Ga0495587_0093228
560 Ga0495609_0000004
561 Ga0495609_0005805
562 Ga0495609_0016282
563 Ga0495597_0000189
564 Ga0495597_0006822
565 Ga0495645_0024339
566 Ga0495622_0001121
567 Ga0495622_0042148
568 Ga0495633_0000135
569 Ga0495633_0001858
570 Ga0495633_0026571
571 Ga0495668_0000018
572 Ga0495668_0020771
573 Ga0495668_0068529
574 Ga0495611_0052170
575 Ga0495661_0000009
576 Ga0495661_0001045
577 Ga0495661_0010655
578 Ga0495588_0013764
579 Ga0495647_0058516
580 Ga0495658_0016180
581 Ga0495669_0000013
582 Ga0495613_0019128
583 Ga0495670_0000052
584 Ga0495670_0005899
585 Ga0495670_0011878
586 Ga0495649_0009698
587 Ga0495649_0018757
588 Ga0495589_0000227
589 Ga0495589_0000495
590 Ga0495589_0032242
591 Ga0495589_0100469
592 Ga0495660_0000525
593 Ga0495660_0005417
594 Ga0495672_0005793
595 Ga0495672_0014734
596 Ga0495676_0000029
597 Ga0495683_0000004
598 Ga0495683_0046977
599 Ga0495687_000007
600 Ga0495677_0001427
601 Ga0495679_000465
602 Ga0495679_013847
603 Ga0495673_0026678
604 Ga0495681_0001808
605 Ga0495681_0012717
606 Ga0495681_0012771
607 Ga0495684_0086189
608 Ga0495686_0000015
609 Ga0495686_0000407
610 Ga0495626_0007014
611 Ga0495626_0022062
612 Ga0495626_0070781
613 Ga0495626_0090430
614 Ga0496103_0062642
615 Ga0496104_0000017
616 Ga0496105_0000009
617 Ga0496115_0000085
618 Ga0496115_0212651
619 Ga0496117_0021776
620 Ga0496117_0155634
621 Ga0496118_0000715
622 Ga0496122_0004439
623 Ga0496123_0003530
624 Ga0496123_0032310
625 Ga0496126_0000033
626 Ga0496126_0073072
627 Ga0495678_000014
628 Ga0495678_005612
629 Ga0495682_0000038
630 Ga0501047_0091330
631 Ga0501079_0074979
632 Ga0501083_0132250
633 Ga0501035_0190743
634 nmdc:mga0yw44_488_c1
635 nmdc:mga06z11_264_c1
636 nmdc:mga06z11_39097_c1
637 nmdc:mga04h51_1955_c1
638 nmdc:mga07m45_648_c2
639 nmdc:mga0n895_29188_c1
640 nmdc:mga0rr50_66491_c1
641 nmdc:mga0sz30_534_c1
642 Ga0500635_0009592
643 Ga0500643_005034
644 Ga0500646_0028443
645 Ga0500597_000225
646 Ga0500559_0009641
647 Ga0500637_0020084
648 2746089960
649 2746095512
650 2874632341
651 2935916470
652 2935925653
653 2935933955
654 2935942493
655 2935950933
656 2935959420
657 2935964354
658 2935975487
659 2935981885
660 2935983478
661 641334521
662 643390967
663 8016631211
664 8019625913
665 8019629631
666 8019639794
667 8019648324
668 8019659720
669 8019667825
670 8019669232
671 8019678302
672 8019691629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

84

133

0.95

PF13437

HlyD_3

HlyD family secretion protein

195

302

0.91

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

84

305

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.8362 79 171
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.8257 79 171
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.8098 82 171
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.8026 82 171
2evb-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form i 0.7986 78 171
ID Description Score Start End Superfamily
3lnnA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9052 257 311 2.40.420.20
af_P77239_320_407_2.40.420.20 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.8962 259 313 2.40.420.20
3ne5C01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.895 258 313 2.40.420.20
4kktA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Efflux pump adaptor protein, beta barrel domain 0.8899 176 253 2.40.30.170
3fppB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.8743 79 172 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A354GTR0-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8966 138 254 GO:0015679
GO:0030288
GO:0046914
GO:0060003
AF-X1P3K4-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8577 174 329 GO:0015562
GO:1990281
AF-A0A090S3H3-F1-model_v4 Macrolide-specific efflux protein MacA 0.841 128 253 GO:0030313
AF-X1P3K4-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8197 174 329 GO:0015562
GO:1990281
AF-A0A178M8W2-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8177 62 253 GO:0042597

Map